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AS locus structure map

HIX0028754: ELK4 protein isoform b.
Chromosome: 1 Position: 205566697..205602000 (35.3Kbp) Strand: - Number of RASVs: 3
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0028754 01-0000975 (mouse_mrna) low priority
HIX0028754 13-0000514 (rat_rna) low priority
HIX0028754 01-0001382 (chimpanzee_rna) low priority
HIX0028754 01-0001383 (chimpanzee_rna)
HIX0028754 01-0000030 (macaque_rna) low priority
HIX0028754 01-0000671 (macaque_rna)
HIX0028754 38-0000034 (dog_rna) low priority

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000196606 ELK4 600246 ELK4 protein isoform b.
HIT000096021 ELK4 600246 Lymph, lymphoma ETS domain-containing protein Elk-4 (Serum response factor accessory protein 1) (SAP-1).
HIT000196607 ELK4 600246 Similar to ELK4 (Fragment).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000261130 ELK4 600246 Lymph, lymphoma ELK4 protein isoform b.

RefSeq
ID Definition
NM_001973 Homo sapiens ELK4, ETS-domain protein (SRF accessory protein 1) (ELK4), transcript variant a, mRNA.
NM_021795 Homo sapiens ELK4, ETS-domain protein (SRF accessory protein 1) (ELK4), transcript variant b, mRNA.

Ensembl
ID Definition
ENST00000289703 ETS domain-containing protein Elk-4 (Serum response factor accessory protein 1)(SAP-1) [Source:UniProtKB/Swiss-Prot;Acc:P28324]
ENST00000357992 ETS domain-containing protein Elk-4 (Serum response factor accessory protein 1)(SAP-1) [Source:UniProtKB/Swiss-Prot;Acc:P28324]
 
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