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AS locus structure map

HIX0028852: Immunoglobulin superfamily member 2 precursor (Glu-Trp-Ile EWI motif- containing protein 101) (EWI-101) (Cell surface glycoprotein V7) (CD101 antigen).
Chromosome: 1 Position: 117544372..117579173 (34.8Kbp) Strand: + Number of RASVs: 4
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0028852 02-0001307 (rat_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000500501 CD101 604516 Brain, cerebellum, PCR rescued clones Immunoglobulin superfamily member 2 precursor (Glu-Trp-Ile EWI motif- containing protein 101) (EWI-101) (Cell surface glycoprotein V7) (CD101 antigen).
HIT000326949 CD101 604516 CD8+ T cell clone Immunoglobulin superfamily member 2 precursor (Glu-Trp-Ile EWI motif- containing protein 101) (EWI-101) (Cell surface glycoprotein V7) (CD101 antigen).
HIT000390117 CD101 604516 Brain, cerebellum, PCR rescued clones Immunoglobulin superfamily member 2 precursor (Glu-Trp-Ile EWI motif- containing protein 101) (EWI-101) (Cell surface glycoprotein V7) (CD101 antigen).
HIT000492861 CD101 604516 leukemia cell line (myelogenous) Similar to Immunoglobulin superfamily member 2 precursor (Glu-Trp-Ile EWI motif- containing protein 101) (EWI-101) (Cell surface glycoprotein V7) (CD101 antigen).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000503499 CD101 604516 Brain, cerebellum, PCR rescued clones Immunoglobulin superfamily member 2 precursor (Glu-Trp-Ile EWI motif- containing protein 101) (EWI-101) (Cell surface glycoprotein V7) (CD101 antigen).

RefSeq
ID Definition
NM_004258 Homo sapiens immunoglobulin superfamily, member 2 (IGSF2), mRNA.

Ensembl
ID Definition
ENST00000256652 Immunoglobulin superfamily member 2 Precursor (Glu- Trp-Ile EWI motif-containing protein 101)(EWI-101)(Cell surface glycoprotein V7)(CD101 antigen) [Source:UniProtKB/Swiss-Prot;Acc:Q93033]
ENST00000369470 Immunoglobulin superfamily member 2 Precursor (Glu- Trp-Ile EWI motif-containing protein 101)(EWI-101)(Cell surface glycoprotein V7)(CD101 antigen) [Source:UniProtKB/Swiss-Prot;Acc:Q93033]
ENST00000437666 Immunoglobulin superfamily member 2 Precursor (Glu- Trp-Ile EWI motif-containing protein 101)(EWI-101)(Cell surface glycoprotein V7)(CD101 antigen) [Source:UniProtKB/Swiss-Prot;Acc:Q93033]
 
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