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AS locus structure map

HIX0034289: Similar to TMDC I precursor.
Chromosome: 8 Position: 39308564..39380470 (71.9Kbp) Strand: - Number of RASVs: 7
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0034289 08-0001237 (mouse_mrna)
HIX0034289 08-0000180 (chimpanzee_rna)
HIX0034289 08-0000530 (macaque_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000324360 ADAM3A testis Similar to TMDC I precursor.
HIT000091073 ADAM3A Testis Similar to ADAM 3B (A disintegrin and metalloproteinase domain 3B) (Cyritestin-2) (Fragment).
HIT000097451 ADAM3A Testis Similar to TMDC I precursor.
HIT000324361 ADAM3A testis Similar to TMDC I precursor.
HIT000324362 ADAM3A testis Similar to TMDC I precursor.
HIT000324363 ADAM3A testis Similar to TMDC I precursor.
HIT000334096 Brain, adult medulla Similar to TMDC I precursor.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000244035 ADAM3A Testis Adult male Similar to TMDC I precursor.

RefSeq
ID Definition
NR_001569 Homo sapiens ADAM metallopeptidase domain 3A (cyritestin 1) (ADAM3A), transcript variant 2, non-coding RNA.
NR_024106 Homo sapiens ADAM metallopeptidase domain 3A (cyritestin 1) (ADAM3A), transcript variant 3, non-coding RNA.
NR_024107 Homo sapiens ADAM metallopeptidase domain 3A (cyritestin 1) (ADAM3A), transcript variant 1, non-coding RNA.

Ensembl
ID Definition
ENST00000328274 ADAM metallopeptidase domain 3A (cyritestin 1) (ADAM3A), transcript variant 2, non-coding RNA [Source:RefSeq DNA;Acc:NR_001569]
ENST00000424066 cDNA FLJ58962, moderately similar to Mus musculus a disintegrin and metallopeptidase domain 3 (cyritestin) (Adam3), mRNA [Source:UniProtKB/TrEMBL;Acc:B4DY53]
 
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