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AS locus structure map

HIX0034291: ADAM 18 precursor (A disintegrin and metalloproteinase domain 18) (Transmembrane metalloproteinase-like, disintegrin-like, and cysteine- rich protein III) (tMDC III).
Chromosome: 8 Position: 39442097..39587583 (145.5Kbp) Strand: + Number of RASVs: 4
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0034291 16-0000382 (rat_rna)
HIX0034291 08-0000180 (chimpanzee_rna)
HIX0034291 08-0000626 (macaque_rna)
HIX0034291 16-0000221 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000264237 ADAM18 Testis Similar to ADAM 18 precursor (A disintegrin and metalloproteinase domain 18) (Transmembrane metalloproteinase-like, disintegrin-like, and cysteine- rich protein III) (tMDC III).
HIT000244761 ADAM18 testis adult male ADAM 18 precursor (A disintegrin and metalloproteinase domain 18) (Transmembrane metalloproteinase-like, disintegrin-like, and cysteine- rich protein III) (tMDC III).
HIT000252365 ADAM18 Similar to ADAM 18 precursor (A disintegrin and metalloproteinase domain 18) (Transmembrane metalloproteinase-like, disintegrin-like, and cysteine- rich protein III) (tMDC III).
HIT000388243 ADAM18 PCR rescued clones Similar to ADAM 18 precursor (A disintegrin and metalloproteinase domain 18) (Transmembrane metalloproteinase-like, disintegrin-like, and cysteine- rich protein III) (tMDC III).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000093511 ADAM18 Testis Similar to ADAM 18 precursor (A disintegrin and metalloproteinase domain 18) (Transmembrane metalloproteinase-like, disintegrin-like, and cysteine- rich protein III) (tMDC III).
HIT000384874 ADAM18 testis Similar to ADAM 18 precursor (A disintegrin and metalloproteinase domain 18) (Transmembrane metalloproteinase-like, disintegrin-like, and cysteine- rich protein III) (tMDC III).
HIT000388242 ADAM18 PCR rescued clones ADAM 18 precursor (A disintegrin and metalloproteinase domain 18) (Transmembrane metalloproteinase-like, disintegrin-like, and cysteine- rich protein III) (tMDC III).
HIT000432827 ADAM18 testis ADAM 18 precursor (A disintegrin and metalloproteinase domain 18) (Transmembrane metalloproteinase-like, disintegrin-like, and cysteine- rich protein III) (tMDC III).

RefSeq
ID Definition
NM_014237 Homo sapiens ADAM metallopeptidase domain 18 (ADAM18), mRNA.

Ensembl
ID Definition
ENST00000265707 Disintegrin and metalloproteinase domain-containing protein 18 Precursor (ADAM 18)(Transmembrane metalloproteinase-like, disintegrin-like, and cysteine- rich protein III)(tMDC III) [Source:UniProtKB/Swiss- Prot;Acc:Q9Y3Q7]
ENST00000379866 Disintegrin and metalloproteinase domain-containing protein 18 Precursor (ADAM 18)(Transmembrane metalloproteinase-like, disintegrin-like, and cysteine- rich protein III)(tMDC III) [Source:UniProtKB/Swiss- Prot;Acc:Q9Y3Q7]
 
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