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AS locus structure map

HIX0039076: Similar to Sperm acrosome membrane-associated protein 3 (Sperm lysozyme-like protein 1) (Lysozyme-like protein 3) (Lysozyme-like acrosomal sperm- specific secretory protein ALLP-17) (Cancer/testis antigen 54) (CT54) [Contains: Sperm acrosome membrane-associated protein 3, membrane form; Sperm acrosome membrane-associated protein 3, processed form].
Chromosome: 17 Position: 31288436..31324895 (36.5Kbp) Strand: + Number of RASVs: 3
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0039076 11-0000674 (mouse_mrna)
HIX0039076 10-0000997 (rat_rna)
HIX0039076 16-0000657 (macaque_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000336307 SPACA3 612749 PCR rescued clones Sperm acrosome membrane-associated protein 3 (Sperm lysozyme-like protein 1) (Lysozyme-like protein 3) (Lysozyme-like acrosomal sperm- specific secretory protein ALLP-17) (Cancer/testis antigen 54) (CT54) [Contains: Sperm acrosome membrane-associated protein 3, membrane form; Sperm acrosome membrane-associated protein 3, processed form].
HIT000091924 SPACA3 612749 Brain, adult medulla Similar to Sperm acrosome membrane-associated protein 3 (Sperm lysozyme-like protein 1) (Lysozyme-like protein 3) (Lysozyme-like acrosomal sperm- specific secretory protein ALLP-17) (Cancer/testis antigen 54) (CT54) [Contains: Sperm acrosome membrane-associated protein 3, membrane form; Sperm acrosome membrane-associated protein 3, processed form].
HIT000252697 SPACA3 612749 Similar to Sperm acrosome membrane-associated protein 3 (Sperm lysozyme-like protein 1) (Lysozyme-like protein 3) (Lysozyme-like acrosomal sperm- specific secretory protein ALLP-17) (Cancer/testis antigen 54) (CT54) [Contains: Sperm acrosome membrane-associated protein 3, membrane form; Sperm acrosome membrane-associated protein 3, processed form].

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000074138 SPACA3 612749 testis Sperm acrosome membrane-associated protein 3 (Sperm lysozyme-like protein 1) (Lysozyme-like protein 3) (Lysozyme-like acrosomal sperm- specific secretory protein ALLP-17) (Cancer/testis antigen 54) (CT54) [Contains: Sperm acrosome membrane-associated protein 3, membrane form; Sperm acrosome membrane-associated protein 3, processed form].
HIT000336308 SPACA3 612749 PCR rescued clones Sperm acrosome membrane-associated protein 3 (Sperm lysozyme-like protein 1) (Lysozyme-like protein 3) (Lysozyme-like acrosomal sperm- specific secretory protein ALLP-17) (Cancer/testis antigen 54) (CT54) [Contains: Sperm acrosome membrane-associated protein 3, membrane form; Sperm acrosome membrane-associated protein 3, processed form].

RefSeq
ID Definition
NM_173847 Homo sapiens sperm acrosome associated 3 (SPACA3), mRNA.

Ensembl
ID Definition
ENST00000269053 Sperm acrosome membrane-associated protein 3 (Sperm lysozyme-like protein 1)(Lysozyme-like protein 3)(Lysozyme-like acrosomal sperm-specific secretory protein ALLP-17)(Sperm protein reactive with antisperm antibodies)(Sperm protein reactive with ASA)(Cancer/testis antigen 54)(CT54) [Contains Sperm acrosome membrane- associated protein 3, membrane form;Sperm acrosome membrane-associated protein 3, processed form] [Source:UniProtKB/Swiss-Prot;Acc:Q8IXA5]
ENST00000394637 Sperm acrosome membrane-associated protein 3 (Sperm lysozyme-like protein 1)(Lysozyme-like protein 3)(Lysozyme-like acrosomal sperm-specific secretory protein ALLP-17)(Sperm protein reactive with antisperm antibodies)(Sperm protein reactive with ASA)(Cancer/testis antigen 54)(CT54) [Contains Sperm acrosome membrane- associated protein 3, membrane form;Sperm acrosome membrane-associated protein 3, processed form] [Source:UniProtKB/Swiss-Prot;Acc:Q8IXA5]
ENST00000394638 Sperm acrosome membrane-associated protein 3 (Sperm lysozyme-like protein 1)(Lysozyme-like protein 3)(Lysozyme-like acrosomal sperm-specific secretory protein ALLP-17)(Sperm protein reactive with antisperm antibodies)(Sperm protein reactive with ASA)(Cancer/testis antigen 54)(CT54) [Contains Sperm acrosome membrane- associated protein 3, membrane form;Sperm acrosome membrane-associated protein 3, processed form] [Source:UniProtKB/Swiss-Prot;Acc:Q8IXA5]
ENST00000411740 Sperm acrosome membrane-associated protein 3 (Sperm lysozyme-like protein 1)(Lysozyme-like protein 3)(Lysozyme-like acrosomal sperm-specific secretory protein ALLP-17)(Sperm protein reactive with antisperm antibodies)(Sperm protein reactive with ASA)(Cancer/testis antigen 54)(CT54) [Contains Sperm acrosome membrane- associated protein 3, membrane form;Sperm acrosome membrane-associated protein 3, processed form] [Source:UniProtKB/Swiss-Prot;Acc:Q8IXA5]
 
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