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AS locus structure map

HIX0039732: Similar to Transcription factor GATA-6 (GATA-binding factor 6).
Chromosome: 18 Position: 19749404..19782491 (33.1Kbp) Strand: + Number of RASVs: 2
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0039732 18-0000077 (mouse_mrna)
HIX0039732 18-0000153 (mouse_mrna) low priority
HIX0039732 18-0000172 (macaque_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000324928 GATA6 601656 normal whole heart fetuses 14-18 wks gestation Similar to GATA-6 (Fragment).
HIT000331327 GATA6 601656 kidney Similar to GATA binding protein 6 variant (Fragment).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition

RefSeq
ID Definition
NM_005257 Homo sapiens GATA binding protein 6 (GATA6), mRNA.

Ensembl
ID Definition
ENST00000269216 Transcription factor GATA-6 (GATA-binding factor 6) [Source:UniProtKB/Swiss-Prot;Acc:Q92908]
 
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