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AS locus structure map

HIX0200246: Period circadian protein homolog 2 (Circadian clock protein PERIOD 2) (hPER2).
Chromosome: 2 Position: 239152679..239198743 (46.1Kbp) Strand: - Number of RASVs: 3
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0200246 01-0000163 (mouse_mrna)
HIX0200246 09-0000007 (rat_rna)
HIX0200246 02b-0000493 (chimpanzee_rna)
HIX0200246 12-0000039 (macaque_rna)
HIX0200246 25-0000298 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000000053 PER2 604348 brain male Period circadian protein homolog 2 (Circadian clock protein PERIOD 2) (hPER2).
HIT000489500 PER2 604348 brain Similar to Period 2 (Fragment).
HIT000498732 PER2 604348 trachea Similar to Period circadian protein homolog 2 (Circadian clock protein PERIOD 2) (hPER2).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition

RefSeq
ID Definition
NM_022817 Homo sapiens period homolog 2 (Drosophila) (PER2), mRNA.

Ensembl
ID Definition
ENST00000254657 Period circadian protein homolog 2 (Circadian clock protein PERIOD 2)(hPER2) [Source:UniProtKB/Swiss- Prot;Acc:O15055]
ENST00000254658 Period circadian protein homolog 2 (Circadian clock protein PERIOD 2)(hPER2) [Source:UniProtKB/Swiss- Prot;Acc:O15055]
ENST00000355768 Period circadian protein homolog 2 (Circadian clock protein PERIOD 2)(hPER2) [Source:UniProtKB/Swiss- Prot;Acc:O15055]
ENST00000431832 Period circadian protein homolog 2 (Circadian clock protein PERIOD 2)(hPER2) [Source:UniProtKB/Swiss- Prot;Acc:O15055]
ENST00000440245 Period circadian protein homolog 2 (Circadian clock protein PERIOD 2)(hPER2) [Source:UniProtKB/Swiss- Prot;Acc:O15055]
 
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