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AS locus structure map

HIX0200771: Occludin.
Chromosome: 5 Position: 68788119..68850132 (62.0Kbp) Strand: + Number of RASVs: 3
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0200771 13-0000492 (mouse_mrna)
HIX0200771 05-0000212 (chimpanzee_rna)
HIX0200771 06-0000457 (macaque_rna)
HIX0200771 02-0000012 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000423494 OCLN 602876 lung Occludin.
HIT000220081 OCLN 602876 Occludin.
HIT000429903_03 OCLN 602876 uterus Similar to SubName: Full=Tight junction protein occludin TM4 minus;

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000040910 OCLN 602876 Brain, Lung, Testis, adult, pooled whole Occludin.
HIT000432367 OCLN 602876 brain fetal Similar to Tight junction protein occludin TM4 minus.
HIT000220313 OCLN 602876 liver Occludin.

RefSeq
ID Definition
NM_002538 Homo sapiens occludin (OCLN), mRNA.

Ensembl
ID Definition
ENST00000355237 Occludin [Source:UniProtKB/Swiss-Prot;Acc:Q16625]
ENST00000396442 Occludin [Source:UniProtKB/Swiss-Prot;Acc:Q16625]
ENST00000380766 Occludin [Source:UniProtKB/Swiss-Prot;Acc:Q16625]
 
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