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AS locus structure map

HIX0201122: Uncharacterised protein family UPF0363 protein.
Chromosome: 7 Position: 916191..936073 (19.9Kbp) Strand: + Number of RASVs: 2
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0201122 05-0000460 (mouse_mrna)
HIX0201122 03-0000755 (macaque_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000070941 GET4 612056 Uncharacterised protein family UPF0363 protein.
HIT000024918 GET4 612056 testis adult Uncharacterised protein family UPF0363 protein.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000006834 GET4 612056 placenta Uncharacterised protein family UPF0363 protein.
HIT000031588 GET4 612056 Placenta, choriocarcinoma Uncharacterised protein family UPF0363 protein.
HIT000007579 GET4 612056 ovary, tumor tissue Conserved hypothetical protein.
HIT000022753 GET4 612056 thymus Uncharacterised protein family UPF0363 protein.
HIT000045736 GET4 612056 testis Uncharacterised protein family UPF0363 protein.
HIT000291584 GET4 612056 Neuroblastoma Cot 25-normalized Uncharacterised protein family UPF0363 protein.

RefSeq
ID Definition
NM_015949 Homo sapiens chromosome 7 open reading frame 20 (C7orf20), mRNA.

Ensembl
ID Definition
ENST00000265857 Protein unc-84 homolog A (Sad1/unc-84 protein-like 1) [Source:UniProtKB/Swiss-Prot;Acc:O94901]
ENST00000407192 Protein unc-84 homolog A (Sad1/unc-84 protein-like 1) [Source:UniProtKB/Swiss-Prot;Acc:O94901]
ENST00000412734 Protein unc-84 homolog A (Sad1/unc-84 protein-like 1) [Source:UniProtKB/Swiss-Prot;Acc:O94901]
ENST00000441491 Protein unc-84 homolog A (Sad1/unc-84 protein-like 1) [Source:UniProtKB/Swiss-Prot;Acc:O94901]
ENST00000426056 Protein unc-84 homolog A (Sad1/unc-84 protein-like 1) [Source:UniProtKB/Swiss-Prot;Acc:O94901]
 
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