You need a JavaScript-enabled browser.

Please return to the top page after you change the setting of JavaScript.

AS locus structure map

HIX0202086: Tetratricopeptide repeat domain 5.
Chromosome: 14 Position: 20757302..20774153 (16.9Kbp) Strand: - Number of RASVs: 4
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0202086 14-0000637 (mouse_mrna)
HIX0202086 14-0000018 (chimpanzee_rna)
HIX0202086 15-0000217 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000050499 TTC5 Eye, retinoblastoma Similar to Tetratricopeptide repeat domain 5.
HIT000055281 TTC5 human cervix adult Similar to Tetratricopeptide repeat domain 5.
HIT000057231 TTC5 human esophagus tumor adult Similar to Tetratricopeptide repeat domain 5.
HIT000266991 TTC5 T cells (Jurkat cell line) Similar to Tetratricopeptide repeat domain 5.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000041156 TTC5 Skin, melanotic melanoma, high MDR. Tetratricopeptide repeat domain 5.
HIT000053906 TTC5 Pancreas, Spleen, adult pooled Tetratricopeptide repeat domain 5.
HIT000081588 TTC5 whole embryo, mainly head embryo, 10 weeks Tetratricopeptide repeat domain 5.
HIT000276757 TTC5 Neuroblastoma Cot 25-normalized Similar to Tetratricopeptide repeat domain 5.
HIT000279677 TTC5 Fetal liver Similar to Tetratricopeptide repeat domain 5.
HIT000287254 TTC5 Neuroblastoma Cot 50-normalized Similar to Tetratricopeptide repeat domain 5.
HIT000289526 TTC5 Neuroblastoma Cot 25-normalized Similar to Tetratricopeptide repeat domain 5.

RefSeq
ID Definition
NM_138376 Homo sapiens tetratricopeptide repeat domain 5 (TTC5), mRNA.

Ensembl
ID Definition
ENST00000258821 Tetratricopeptide repeat protein 5 (TPR repeat protein 5) [Source:UniProtKB/Swiss-Prot;Acc:Q8N0Z6]
ENST00000383029 Tetratricopeptide repeat protein 5 (TPR repeat protein 5) [Source:UniProtKB/Swiss-Prot;Acc:Q8N0Z6]
ENST00000423949 Tetratricopeptide repeat protein 5 (TPR repeat protein 5) [Source:UniProtKB/Swiss-Prot;Acc:Q8N0Z6]
 
Annotation controller