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AS locus structure map

HIX0202305: Insulin-like growth factor-binding protein complex acid labile chain precursor (ALS).
Chromosome: 16 Position: 1840415..1844909 (4.5Kbp) Strand: - Number of RASVs: 3
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0202305 16-0000071 (chimpanzee_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000196646 IGFALS 601489 liver adult Insulin-like growth factor-binding protein complex acid labile chain precursor (ALS).
HIT000428464 liver Similar to Insulin-like growth factor-binding protein complex acid labile chain precursor (ALS).
HIT000497770 IGFALS 601489 thymus Leucine-rich repeat, cysteine-rich flanking region, N-terminal domain containing protein.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000039954 IGFALS 601489 Lung, Spleen, fetal, pooled Insulin-like growth factor-binding protein complex acid labile chain precursor (ALS).
HIT000424979 IGFALS 601489 breast, tumor tissue Insulin-like growth factor-binding protein complex acid labile chain precursor (ALS).
HIT000432064 IGFALS 601489 liver Insulin-like growth factor-binding protein complex acid labile chain precursor (ALS).
HIT000434674 IGFALS 601489 breast adult Insulin-like growth factor-binding protein complex acid labile chain precursor (ALS).

RefSeq
ID Definition
NM_004970 Homo sapiens insulin-like growth factor binding protein, acid labile subunit (IGFALS), transcript variant 2, mRNA.
NM_001146006 Homo sapiens insulin-like growth factor binding protein, acid labile subunit (IGFALS), transcript variant 1, mRNA.
NR_027389 Homo sapiens insulin-like growth factor binding protein, acid labile subunit (IGFALS), transcript variant 3, transcribed RNA.

Ensembl
ID Definition
ENST00000215539 Insulin-like growth factor-binding protein complex acid labile chain Precursor (ALS) [Source:UniProtKB/Swiss- Prot;Acc:P35858]
ENST00000415638 Insulin-like growth factor-binding protein complex acid labile chain Precursor (ALS) [Source:UniProtKB/Swiss- Prot;Acc:P35858]
 
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