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AS locus structure map

HIX0202327: Tumor necrosis factor receptor superfamily member 17 (B-cell maturation protein) (CD269 antigen).
Chromosome: 16 Position: 12058964..12061925 (3.0Kbp) Strand: + Number of RASVs: 3
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0202327 16-0000182 (chimpanzee_rna)
HIX0202327 20-0000688 (macaque_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000326506 TNFRSF17 109545 Tumor necrosis factor receptor superfamily member 17 (B-cell maturation protein) (CD269 antigen).
HIT000468745 109545 CD19+ peripheral blood cells Tumor necrosis factor receptor superfamily member 17 (B cell maturation antigen transcript variant 4).
HIT000468744 109545 CD19+ peripheral blood cells Similar to Antisense BCMA peptide.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000326857 TNFRSF17 109545 B-lymphocyte Tumor necrosis factor receptor superfamily member 17 (B-cell maturation protein) (CD269 antigen).
HIT000259846 TNFRSF17 109545 Pooled, 40 cell lines Tumor necrosis factor receptor superfamily member 17 (B-cell maturation protein) (CD269 antigen).
HIT000326856 B-lymphocyte SubName: Full=Antisense BCMA peptide;
HIT000468743 109545 CD19+ peripheral blood cells Antisense BCMA peptide.
HIT000332092 109545 Tumor necrosis factor receptor superfamily member 17 (B cell maturation antigen transcript variant 4).

RefSeq
ID Definition
NM_001192 Homo sapiens tumor necrosis factor receptor superfamily, member 17 (TNFRSF17), mRNA.

Ensembl
ID Definition
ENST00000053243 Tumor necrosis factor receptor superfamily member 17 (B-cell maturation protein)(CD269 antigen) [Source:UniProtKB/Swiss-Prot;Acc:Q02223]
ENST00000396495 Tumor necrosis factor receptor superfamily member 17 (B-cell maturation protein)(CD269 antigen) [Source:UniProtKB/Swiss-Prot;Acc:Q02223]
ENST00000435355 Tumor necrosis factor receptor superfamily member 17 (B-cell maturation protein)(CD269 antigen) [Source:UniProtKB/Swiss-Prot;Acc:Q02223]
 
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