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AS locus structure map

01-0000174: Macaca fascicularis testis cDNA, clone: QtsA-16987, similar to human pyrroline-5-carboxylate reductase family, member 2(PYCR2), mRNA, RefSeq: NM_013328.2.
Chromosome: 1 Position: 144471989..144476715 (4.7Kbp) Strand: + Number of RASVs: 7
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
ID Corresponding human locus
01-0000174 HIX0001639

RASV
ID Cell type Tissue type Development stage Sex Definition
XM_001092867 PREDICTED: Macaca mulatta similar to pyrroline-5-carboxylate reductase family, member 2, transcript variant 4 (LOC699808), mRNA.
XM_001092518 PREDICTED: Macaca mulatta similar to pyrroline-5-carboxylate reductase family, member 2, transcript variant 2 (LOC699808), mRNA.
ENSMMUT00000016007
ENSMMUT00000016008
ENSMMUT00000045379
XM_001092410 PREDICTED: Macaca mulatta similar to pyrroline-5-carboxylate reductase family, member 2, transcript variant 1 (LOC699808), mRNA.
XM_001092756 PREDICTED: Macaca mulatta similar to pyrroline-5-carboxylate reductase family, member 2, transcript variant 3 (LOC699808), mRNA.

Other ASV
ID Cell type Tissue type Development stage Sex Definition
AB169063 adult male Macaca fascicularis testis cDNA, clone: QtsA-16987, similar to human pyrroline-5-carboxylate reductase family, member 2(PYCR2), mRNA, RefSeq: NM_013328.2.
ENSMMUT00000045383
ENSMMUT00000045386

RefSeq
ID Definition
XM_001092867 PREDICTED: Macaca mulatta similar to pyrroline-5-carboxylate reductase family, member 2, transcript variant 4 (LOC699808), mRNA.
XM_001092518 PREDICTED: Macaca mulatta similar to pyrroline-5-carboxylate reductase family, member 2, transcript variant 2 (LOC699808), mRNA.
XM_001092410 PREDICTED: Macaca mulatta similar to pyrroline-5-carboxylate reductase family, member 2, transcript variant 1 (LOC699808), mRNA.
XM_001092756 PREDICTED: Macaca mulatta similar to pyrroline-5-carboxylate reductase family, member 2, transcript variant 3 (LOC699808), mRNA.

Ensembl
ID Definition
ENSMMUT00000045383
ENSMMUT00000045386
ENSMMUT00000016007
ENSMMUT00000016008
ENSMMUT00000045379
 
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