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AS locus structure map

09-0000228: Macaca mulatta clone ds2_g14_t7_070 phosphoglycerate mutase 1 (PGAM1) mRNA, partial cds.
Chromosome: 9 Position: 97014317..97023146 (8.8Kbp) Strand: + Number of RASVs: 2
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
ID Corresponding human locus
09-0000228 HIX0009089

RASV
ID Cell type Tissue type Development stage Sex Definition
XM_001104143 PREDICTED: Macaca mulatta similar to Phosphoglycerate mutase 1 (Phosphoglycerate mutase isozyme B) (PGAM-B) (BPG-dependent PGAM 1), transcript variant 2 (PGAM1), mRNA.
XM_001103972 PREDICTED: Macaca mulatta similar to Phosphoglycerate mutase 1 (Phosphoglycerate mutase isozyme B) (PGAM-B) (BPG-dependent PGAM 1), transcript variant 1 (PGAM1), mRNA.

Other ASV
ID Cell type Tissue type Development stage Sex Definition
ENSMMUT00000028146 Macaca mulatta clone ds2_g14_t7_070 phosphoglycerate mutase 1 (PGAM1) mRNA, partial cds; DQ147953.
XM_001104228 PREDICTED: Macaca mulatta similar to Phosphoglycerate mutase 1 (Phosphoglycerate mutase isozyme B) (PGAM-B) (BPG-dependent PGAM 1), transcript variant 3 (PGAM1), mRNA.

RefSeq
ID Definition
XM_001104143 PREDICTED: Macaca mulatta similar to Phosphoglycerate mutase 1 (Phosphoglycerate mutase isozyme B) (PGAM-B) (BPG-dependent PGAM 1), transcript variant 2 (PGAM1), mRNA.
XM_001104228 PREDICTED: Macaca mulatta similar to Phosphoglycerate mutase 1 (Phosphoglycerate mutase isozyme B) (PGAM-B) (BPG-dependent PGAM 1), transcript variant 3 (PGAM1), mRNA.
XM_001103972 PREDICTED: Macaca mulatta similar to Phosphoglycerate mutase 1 (Phosphoglycerate mutase isozyme B) (PGAM-B) (BPG-dependent PGAM 1), transcript variant 1 (PGAM1), mRNA.

Ensembl
ID Definition
ENSMMUT00000028146 Macaca mulatta clone ds2_g14_t7_070 phosphoglycerate mutase 1 (PGAM1) mRNA, partial cds; DQ147953.
 
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