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AS locus structure map

01-0000002: Mus musculus chemokine (C-X-C motif) receptor 4, mRNA (cDNA clone MGC:36266 IMAGE:3592479), complete cds.
Chromosome: 1 Position: 130484776..130488876 (4.1Kbp) Strand: - Number of RASVs: 2
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
ID Corresponding human locus
01-0000002 HIX0002482

RASV
Hyperlink management Cell type Tissue type Development stage Sex Definition
D87747 pre-B cell bone marrow Mus musculus mRNA for murine CXCR-4, complete cds.
Z80111 thymus adult Mus musculus mRNA encoding CXCR-4.

Other ASV
Hyperlink management Cell type Tissue type Development stage Sex Definition
AB000803 thymus E17 Mus musculus mRNA for murine CXCR-4, complete cds.
BC031665 Mammary tumor. Metallothionien-TGF alpha Mus musculus chemokine (C-X-C motif) receptor 4, mRNA (cDNA clone MGC:36266 IMAGE:3592479), complete cds.
BC098322 Mammary tumor. WAP-TGF alpha model. 7 months Mus musculus chemokine (C-X-C motif) receptor 4, mRNA (cDNA clone MGC:102523 IMAGE:2864967), complete cds.
U59760 Mus musculus fusin homolog mRNA, complete cds.
X99582 thymus 6-8 weeks old female M.musculus mRNA for leukocyte-dervied seven transmembrane domain receptor.

RefSeq
ID Definition
NM_009911 Mus musculus chemokine (C-X-C motif) receptor 4 (Cxcr4), mRNA.
XM_001478244 PREDICTED: Mus musculus similar to fusin homolog (LOC100047410), mRNA.

Ensembl
ID Definition
ENSMUST00000052172 C-X-C chemokine receptor type 4 (CXC-R4) (CXCR-4) (Stromal cell- derived factor 1 receptor) (SDF-1 receptor) (Fusin) (Leukocyte-derived seven transmembrane domain receptor) (LESTR) (Pre-B-cell-derived chemokine receptor) (PB-CKR) (CD184 antigen). [Source:Uniprot/SWISSPROT;Acc:P70658]
 
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