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AS locus structure map

02-0001074: Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630033F10 product:Pyruvate dehydrogenase, full insert sequence.
Chromosome: 2 Position: 71711281..71741902 (30.6Kbp) Strand: + Number of RASVs: 5
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
ID Corresponding human locus
02-0001074 HIX0002597

RASV
Hyperlink management Cell type Tissue type Development stage Sex Definition
AK046805 medulla oblongata 10 days neonate Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830012B01 product:[PYRUVATE DEHYDROGENASE [LIPOAMIDE]] KINASE ISOZYME 1, MITOCHONDRIAL PRECURSOR (EC 2.7.1.99) (PYRUVATE DEHYDROGENASE KINASE ISOFORM 1) (PDK P48) homolog [Rattus norvegicus], full insert sequence.
AK038454 hypothalamus adult male Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230013K13 product:[PYRUVATE DEHYDROGENASE [LIPOAMIDE]] KINASE ISOZYME 1, MITOCHONDRIAL PRECURSOR (EC 2.7.1.99) (PYRUVATE DEHYDROGENASE KINASE ISOFORM 1) (PDK P48) homolog [Rattus norvegicus], full insert sequence.
AK085215 stomach 13 days embryo Mus musculus 13 days embryo stomach cDNA, RIKEN full-length enriched library, clone:D530020C15 product:similar to PYRUVATE DEHYDROGENASE KINASE 1 (FRAGMENT) [Phodopus sungorus], full insert sequence.
AK163553 corpora quadrigemina adult male Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230368J03 product:Pyruvate dehydrogenase kinase 1 (Fragment) homolog [Phodopus sungorus], full insert sequence.
BC025480 Mammary tumor. C3(1)-Tag model. Infiltrating Mus musculus cDNA clone IMAGE:5354131.

Other ASV
Hyperlink management Cell type Tissue type Development stage Sex Definition
AK153649 thymus 3 days neonate Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630033F10 product:Pyruvate dehydrogenase, full insert sequence.
BC027196 Mammary tumor. Metallothionien-TGF alpha Mus musculus pyruvate dehydrogenase kinase, isoenzyme 1, mRNA (cDNA clone MGC:28719 IMAGE:4458562), complete cds.

RefSeq
ID Definition
NM_172665 Mus musculus pyruvate dehydrogenase kinase, isoenzyme 1 (Pdk1), nuclear gene encoding mitochondrial protein, mRNA.

Ensembl
ID Definition
ENSMUST00000006669 [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1, mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 1). [Source:Uniprot/SWISSPROT;Acc:Q8BFP9]
 
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