You need a JavaScript-enabled browser.

Please return to the top page after you change the setting of JavaScript.

AS locus structure map

02-0001287: Mus musculus activating signal cointegrator 1 complex subunit 3-like 1, mRNA (cDNA clone MGC:67133 IMAGE:6408607), complete cds.
Chromosome: 2 Position: 127034122..127066234 (32.1Kbp) Strand: + Number of RASVs: 4
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
ID Corresponding human locus
02-0001287 HIX0002273

RASV
Hyperlink management Cell type Tissue type Development stage Sex Definition
BC055940 Mammary tumor metastatized to lung. Tumor Mus musculus activating signal cointegrator 1 complex subunit 3-like 1, mRNA (cDNA clone IMAGE:3990584), partial cds.
BC063261 Brain, enriched mouse brain 12.5dp Mus musculus activating signal cointegrator 1 complex subunit 3-like 1, mRNA (cDNA clone MGC:67133 IMAGE:6408607), complete cds.
AK039567 spinal cord adult male Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330064G03 product:CDNA FLJ14329 FIS, CLONE PLACE4000259, HIGHLY SIMILAR TO H.SAPIENS U5 SNRNP-SPECIFIC 200KD PROTEIN homolog [Homo sapiens], full insert sequence.
AK081920 head 16 days embryo Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130087G11 product:similar to CDNA FLJ14329 FIS, CLONE PLACE4000259, HIGHLY SIMILAR TO H.SAPIENS U5 SNRNP-SPECIFIC 200KD PROTEIN [Homo sapiens], full insert sequence.

Other ASV
Hyperlink management Cell type Tissue type Development stage Sex Definition
AK149291 retina adult Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930013G03 product:PRO2281 (Similar to U5 snRNP-specific protein, 200 kDa) (DEXH RNA helicase family) homolog [Homo sapiens], full insert sequence.
BC058608 Mammary tumor. Brca1-/fl; MMTV-Cre model. 10 Mus musculus activating signal cointegrator 1 complex subunit 3-like 1, mRNA (cDNA clone IMAGE:5389726).

RefSeq
ID Definition
NM_177214 Mus musculus activating signal cointegrator 1 complex subunit 3-like 1 (Ascc3l1), mRNA.

Ensembl
ID Definition
ENSMUST00000052695 U5 snRNP-specific protein, 200 kDa [Source:RefSeq_peptide;Acc:NP_796188]
ENSMUST00000103220 U5 snRNP-specific protein, 200 kDa [Source:RefSeq_peptide;Acc:NP_796188]
 
Annotation controller