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AS locus structure map

04-0000302: Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830468L16 product:nuclear receptor coactivator 6 interacting protein, full insert sequence.
Chromosome: 4 Position: 3502022..3543769 (41.7Kbp) Strand: + Number of RASVs: 2
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
ID Corresponding human locus
04-0000302 HIX0007515

RASV
Hyperlink management Cell type Tissue type Development stage Sex Definition
BC075728 Limb, mouse, day 10.5 and 11.5, pool of Mus musculus trimethylguanosine synthase homolog (S. cerevisiae), mRNA (cDNA clone MGC:78321 IMAGE:6513964), complete cds.
BC058183 Mammary tumor. C3(1)-Tag model. Infiltrating Mus musculus trimethylguanosine synthase homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:5324421), partial cds.

Other ASV
Hyperlink management Cell type Tissue type Development stage Sex Definition
AF389908 Mus musculus PIMT (Pimt) mRNA, complete cds.
AK030953 thymus adult male Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830468L16 product:nuclear receptor coactivator 6 interacting protein, full insert sequence.
AK044895 parthenogenote 9.5 days embryo Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130010L05 product:nuclear receptor coactivator 6 interacting protein, full insert sequence.

RefSeq
ID Definition
NM_054089 Mus musculus trimethylguanosine synthase homolog (S. cerevisiae) (Tgs1), mRNA.

Ensembl
ID Definition
ENSMUST00000052712 Trimethylguanosine synthase homolog (EC 2.1.1.-) (Nuclear receptor coactivator 6-interacting protein) (PRIP-interacting protein with methyltransferase motif) (PIPMT) (PIMT). [Source:Uniprot/SWISSPROT;Acc:Q923W1]
 
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