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AS locus structure map

11-0000199: Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930010H24 product:tumor necrosis factor (ligand) superfamily, member 12., full insert sequence.
Chromosome: 11 Position: 69496079..69511261 (15.2Kbp) Strand: - Number of RASVs: 3
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
ID Corresponding human locus
11-0000199 HIX0013500
11-0000199 HIX0202492

RASV
Hyperlink management Cell type Tissue type Development stage Sex Definition
AK170297 NOD-derived CD11c +ve dendritic cells Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630043A10 product:tumor necrosis factor (ligand) superfamily, member 12, full insert sequence.
AK009514 tongue adult male Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310026N09 product:tumor necrosis factor (ligand) superfamily, member 13, full insert sequence.
AK044387 retina adult Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930010H24 product:tumor necrosis factor (ligand) superfamily, member 12., full insert sequence.

Other ASV
Hyperlink management Cell type Tissue type Development stage Sex Definition
AF030100 peritoneal macrophages Mus musculus TWEAK mRNA, complete cds.
AK020909 retina adult Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930030D13 product:tumor necrosis factor (ligand) superfamily, member 12, full insert sequence.
AK171014 NOD-derived CD11c +ve dendritic cells Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630218H03 product:tumor necrosis factor (ligand) superfamily, member 12, full insert sequence.
AK040667 aorta and vein adult male Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530010M09 product:tumor necrosis factor (ligand) superfamily, member 13, full insert sequence.
AK134028 thymus adult male Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830411O11 product:tumor necrosis factor (ligand) superfamily, member 13, full insert sequence.
AK170351 NOD-derived CD11c +ve dendritic cells Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630050H12 product:tumor necrosis factor (ligand) superfamily, member 13, full insert sequence.
BC069900 Mammary tumor. Brca1-/fl; MMTV-Cre model. 10 Mus musculus tumor necrosis factor (ligand) superfamily, member 13, mRNA (cDNA clone MGC:78131 IMAGE:5290965), complete cds.
BC096441 Mammary tumor. WAP-TGF alpha model. 7 months Mus musculus tumor necrosis factor (ligand) superfamily, member 12-member 13, mRNA (cDNA clone MGC:106105 IMAGE:3482756), complete cds.

RefSeq
ID Definition
NM_001034097 Mus musculus tumor necrosis factor (ligand) superfamily, member 12-member 13 (Tnfsf12-tnfsf13), transcript variant 1, mRNA.
NM_001034098 Mus musculus tumor necrosis factor (ligand) superfamily, member 12-member 13 (Tnfsf12-tnfsf13), transcript variant 2, mRNA.
NM_011614 Mus musculus tumor necrosis factor (ligand) superfamily, member 12 (Tnfsf12), mRNA.
NM_023517 Mus musculus tumor necrosis factor (ligand) superfamily, member 13 (Tnfsf13), mRNA.
XM_001480052 PREDICTED: Mus musculus similar to TWEAK (LOC100048347), mRNA.

Ensembl
ID Definition
ENSMUST00000018896 Tumor necrosis factor ligand superfamily member 12 (TNF-related weak inducer of apoptosis) (TWEAK) [Contains: Tumor necrosis factor ligand superfamily member 12, membrane form; Tumor necrosis factor ligand superfamily member 12, secreted form]. [Source:Uniprot/SWISSPROT;Acc:O54907]
ENSMUST00000094070 Tumor necrosis factor ligand superfamily member 12 (TNF-related weak inducer of apoptosis) (TWEAK) [Contains: Tumor necrosis factor ligand superfamily member 12, membrane form; Tumor necrosis factor ligand superfamily member 12, secreted form]. [Source:Uniprot/SWISSPROT;Acc:O54907]
ENSMUST00000102587 Tumor necrosis factor ligand superfamily member 12 (TNF-related weak inducer of apoptosis) (TWEAK) [Contains: Tumor necrosis factor ligand superfamily member 12, membrane form; Tumor necrosis factor ligand superfamily member 12, secreted form]. [Source:Uniprot/SWISSPROT;Acc:O54907]
ENSMUST00000108648 Tumor necrosis factor ligand superfamily member 12 (TNF-related weak inducer of apoptosis) (TWEAK) [Contains: Tumor necrosis factor ligand superfamily member 12, membrane form; Tumor necrosis factor ligand superfamily member 12, secreted form]. [Source:Uniprot/SWISSPROT;Acc:O54907]
ENSMUST00000108649 Tumor necrosis factor ligand superfamily member 12 (TNF-related weak inducer of apoptosis) (TWEAK) [Contains: Tumor necrosis factor ligand superfamily member 12, membrane form; Tumor necrosis factor ligand superfamily member 12, secreted form]. [Source:Uniprot/SWISSPROT;Acc:O54907]
ENSMUST00000108650 Tumor necrosis factor ligand superfamily member 12 (TNF-related weak inducer of apoptosis) (TWEAK) [Contains: Tumor necrosis factor ligand superfamily member 12, membrane form; Tumor necrosis factor ligand superfamily member 12, secreted form]. [Source:Uniprot/SWISSPROT;Acc:O54907]
 
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