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AS locus structure map

11-0000244: Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430407H14 product:beclin 1 (coiled-coil, myosin-like BCL2-interacting protein), full insert sequence.
Chromosome: 11 Position: 101147266..101163600 (16.3Kbp) Strand: - Number of RASVs: 4
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
ID Corresponding human locus
11-0000244 HIX0202461
11-0000244 HIX0018211

RASV
Hyperlink management Cell type Tissue type Development stage Sex Definition
AK050329 tumor liver adult male Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730037L14 product:beclin 1 (coiled-coil, myosin-like BCL2-interacting protein), full insert sequence.
AK028851 skin 10 days neonate Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732462H16 product:beclin 1 (coiled-coil, myosin-like BCL2-interacting protein), full insert sequence.
AK031501 testis 13 days embryo male Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030442J23 product:beclin 1 (coiled-coil, myosin-like BCL2-interacting protein), full insert sequence.
AK077392 head 6 days neonate Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched library, clone:5430417M23 product:beclin 1 (coiled-coil, myosin-like BCL2-interacting protein), full insert sequence.

Other ASV
Hyperlink management Cell type Tissue type Development stage Sex Definition
AK032176 olfactory brain adult male Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430407H14 product:beclin 1 (coiled-coil, myosin-like BCL2-interacting protein), full insert sequence.
AK083800 spinal ganglion 12 days embryo Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130011M20 product:beclin 1 (coiled-coil, myosin-like BCL2-interacting protein), full insert sequence.
AK151531 macrophage bone marrow Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830031G17 product:beclin 1 (coiled-coil, myosin-like BCL2-interacting protein), full insert sequence.
BC005770 Mammary tumor. Brca1-/fl; MMTV-Cre model. 10 Mus musculus beclin 1 (coiled-coil, myosin-like BCL2-interacting protein), mRNA (cDNA clone MGC:6843 IMAGE:2650059), complete cds.

RefSeq
ID Definition
NM_019584 Mus musculus beclin 1, autophagy related (Becn1), mRNA.

Ensembl
ID Definition
ENSMUST00000041403 Beclin-1 (Coiled-coil myosin-like BCL2-interacting protein). [Source:Uniprot/SWISSPROT;Acc:O88597]
 
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