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AS locus structure map

10-0000226: Rattus norvegicus beclin 1 (coiled-coil, myosin-like BCL2-interacting protein), mRNA (cDNA clone MGC:91559 IMAGE:7100185), complete cds.
Chromosome: 10 Position: 90317953..90333329 (15.4Kbp) Strand: - Number of RASVs: 2
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
ID Corresponding human locus
10-0000226 HIX0202461
10-0000226 HIX0018211

RASV
ID Cell type Tissue type Development stage Sex Definition
NM_001034117 Rattus norvegicus beclin 1 (coiled-coil, myosin-like BCL2-interacting protein) (Becn1), transcript variant 2, mRNA.
ENSRNOT00000027868 Rattus norvegicus Bcl-2-interacting coiled-coil protein beclin mRNA, complete cds; AY033824.

Other ASV
ID Cell type Tissue type Development stage Sex Definition
BC074011 Lung, rat (Brown Norway) Rattus norvegicus beclin 1 (coiled-coil, myosin-like BCL2-interacting protein), mRNA (cDNA clone MGC:91559 IMAGE:7100185), complete cds.
NM_053739 Rattus norvegicus beclin 1 (coiled-coil, myosin-like BCL2-interacting protein) (Becn1), transcript variant 1, mRNA.

RefSeq
ID Definition
NM_001034117 Rattus norvegicus beclin 1 (coiled-coil, myosin-like BCL2-interacting protein) (Becn1), transcript variant 2, mRNA.
NM_053739 Rattus norvegicus beclin 1 (coiled-coil, myosin-like BCL2-interacting protein) (Becn1), transcript variant 1, mRNA.

Ensembl
ID Definition
ENSRNOT00000027868 Rattus norvegicus Bcl-2-interacting coiled-coil protein beclin mRNA, complete cds; AY033824.
 
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