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AS locus structure map

10-0000347: Rat interferon regulatory factor 1 (IRF-1) mRNA, complete cds.
Chromosome: 10 Position: 39220592..39227698 (7.1Kbp) Strand: + Number of RASVs: 2
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
ID Corresponding human locus
10-0000347 HIX0200727
10-0000347 HIX0005159

RASV
ID Cell type Tissue type Development stage Sex Definition
M34253 Rat interferon regulatory factor 1 (IRF-1) mRNA, complete cds.
ENSRNOT00000058927

Other ASV
ID Cell type Tissue type Development stage Sex Definition
BC076382 Lung, rat (Brown Norway) Rattus norvegicus interferon regulatory factor 1, mRNA (cDNA clone MGC:93592 IMAGE:7099391), complete cds.
ENSRNOT00000010968 Rattus norvegicus interferon regulatory factor 1, mRNA (cDNA clone MGC:93592 IMAGE:7099391), complete cds; BC076382.
NM_012591 Rattus norvegicus interferon regulatory factor 1 (Irf1), mRNA.

RefSeq
ID Definition
NM_012591 Rattus norvegicus interferon regulatory factor 1 (Irf1), mRNA.

Ensembl
ID Definition
ENSRNOT00000010968 Rattus norvegicus interferon regulatory factor 1, mRNA (cDNA clone MGC:93592 IMAGE:7099391), complete cds; BC076382.
ENSRNOT00000058927
 
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