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AS locus structure map

12-0000018: Rattus norvegicus neuronal nitric oxide synthase mRNA, alternative untranslated exon 1a.
Chromosome: 12 Position: 39893101..40375789 (482.7Kbp) Strand: - Number of RASVs: 5
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
ID Corresponding human locus
12-0000018 HIX0036725
12-0000018 HIX0018992

RASV
ID Cell type Tissue type Development stage Sex Definition
XM_001080103 PREDICTED: Rattus norvegicus similar to Kinase suppressor of ras-1 (Kinase suppressor of ras) (predicted) (RGD1559640_predicted), mRNA.
ENSRNOT00000032659
ENSRNOT00000046190
XM_001080090 PREDICTED: Rattus norvegicus similar to kinase suppressor of ras 2 (predicted) (RGD1562674_predicted), mRNA.
XM_222212 PREDICTED: Rattus norvegicus similar to kinase suppressor of ras 2 (predicted) (RGD1562674_predicted), mRNA.

Other ASV
ID Cell type Tissue type Development stage Sex Definition
XM_577253 PREDICTED: Rattus norvegicus similar to Kinase suppressor of ras-1 (Kinase suppressor of ras) (predicted) (RGD1559640_predicted), mRNA.

RefSeq
ID Definition
XM_001080103 PREDICTED: Rattus norvegicus similar to Kinase suppressor of ras-1 (Kinase suppressor of ras) (predicted) (RGD1559640_predicted), mRNA.
XM_577253 PREDICTED: Rattus norvegicus similar to Kinase suppressor of ras-1 (Kinase suppressor of ras) (predicted) (RGD1559640_predicted), mRNA.
XM_001080090 PREDICTED: Rattus norvegicus similar to kinase suppressor of ras 2 (predicted) (RGD1562674_predicted), mRNA.
XM_222212 PREDICTED: Rattus norvegicus similar to kinase suppressor of ras 2 (predicted) (RGD1562674_predicted), mRNA.

Ensembl
ID Definition
ENSRNOT00000032420
ENSRNOT00000042626
ENSRNOT00000032659
ENSRNOT00000046190
 
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