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AS locus structure map

13-0000514: PREDICTED: Rattus norvegicus similar to hypothetical protein DKFZp761N1114 (predicted) (RGD1566090_predicted), mRNA.
Chromosome: 13 Position: 44909097..44949554 (40.5Kbp) Strand: - Number of RASVs: 3
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
ID Corresponding human locus
13-0000514 HIX0001516
13-0000514 HIX0028754

RASV
ID Cell type Tissue type Development stage Sex Definition
ENSRNOT00000030543
XM_001059162 PREDICTED: Rattus norvegicus similar to hypothetical protein DKFZp761N1114 (predicted) (RGD1566090_predicted), mRNA.
XM_573448 PREDICTED: Rattus norvegicus similar to hypothetical protein DKFZp761N1114 (predicted) (RGD1566090_predicted), mRNA.

Other ASV
ID Cell type Tissue type Development stage Sex Definition

RefSeq
ID Definition
XM_001059162 PREDICTED: Rattus norvegicus similar to hypothetical protein DKFZp761N1114 (predicted) (RGD1566090_predicted), mRNA.
XM_573448 PREDICTED: Rattus norvegicus similar to hypothetical protein DKFZp761N1114 (predicted) (RGD1566090_predicted), mRNA.

Ensembl
ID Definition
ENSRNOT00000030543
ENSRNOT00000060968
 
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