You need a JavaScript-enabled browser.

Please return to the top page after you change the setting of JavaScript.

AS locus structure map

20-0000098: Rattus norvegicus prosaposin, mRNA (cDNA clone MGC:72521 IMAGE:5600088), complete cds.
Chromosome: 20 Position: 27595048..27621907 (26.9Kbp) Strand: + Number of RASVs: 2
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
ID Corresponding human locus
20-0000098 HIX0008908

RASV
ID Cell type Tissue type Development stage Sex Definition
M19936 Rat sulfated glycoprotein 1 (SGP-1) mRNA, complete cds.
ENSRNOT00000057780

Other ASV
ID Cell type Tissue type Development stage Sex Definition
BC061759 Prostate, pool of NCI_CGAP_Pr30, 40, 41 and Rattus norvegicus prosaposin, mRNA (cDNA clone MGC:72521 IMAGE:5600088), complete cds.
ENSRNOT00000000696 Rattus norvegicus prosaposin, mRNA (cDNA clone MGC:72521 IMAGE:5600088), complete cds; BC061759.
NM_013013 Rattus norvegicus prosaposin (Psap), mRNA.
S81353 sulfated glycoprotein-1 [rats, testes, mRNA Partial, 1692 nt].
S81373 testicle prosaposin=sulfated glycoprotein-1 [rats, Stratagene, testicle, mRNA, 1737 nt].

RefSeq
ID Definition
NM_013013 Rattus norvegicus prosaposin (Psap), mRNA.

Ensembl
ID Definition
ENSRNOT00000000696 Rattus norvegicus prosaposin, mRNA (cDNA clone MGC:72521 IMAGE:5600088), complete cds; BC061759.
ENSRNOT00000057780
 
Annotation controller