Statistics
Table 1. Representative AS variant (RASV).
| Human | Human | Mouse | Mouse | Rat | Chimpanzee | Macaque | Dog | |
|---|---|---|---|---|---|---|---|---|
| Data set | Full-length cDNA | mRNA | Full-length cDNA | mRNA | RNA | RNA | RNA | RNA |
| Transcript total (Locus) |
95160 (27193) |
238741 (43538) |
121906 (41661) |
252615 (75348) |
120178 (44077) |
92763 (32631) |
94104 (35112) |
63471 (23757) |
| RASV (Locus) |
38169 (11538) |
60766 (14963) |
29756 (10176) |
38661 (12025) |
22353 (8500) |
44687 (11557) |
35123 (10651) |
29806 (9736) |
Table 2. AS pattern of RASV.
| Human | Human | Mouse | Mouse | Rat | Chimpanzee | Macaque | Dog | |
|---|---|---|---|---|---|---|---|---|
| Data set | Full-length cDNA | mRNA | Full-length cDNA | mRNA | RNA | RNA | RNA | RNA |
 Cassette exon - including multiple cassette |
23176 (6745) |
40271 (9420) |
11104 (3690) |
16343 (4828) |
11373 (3903) |
30414 (6819) |
22022 (6055) |
17340 (4714) |
 Alternative 3' splice |
14073 (4040) |
25415 (6039) |
5736 (2014) |
9444 (2944) |
9269 (3342) |
19668 (4497) |
15535 (4456) |
15142 (4244) |
 Alternative 5' splice |
13738 (4067) |
25069 (6122) |
6310 (2205) |
9801 (3071) |
9532 (3430) |
20898 (4921) |
16273 (4730) |
16124 (4602) |
 Mutually exclusive exon |
2246 (791) |
4941 (1393) |
545 (191) |
1078 (318) |
2800 (951) |
4895 (1145) |
4327 (1387) |
4140 (1012) |
 Retained intron |
11432 (3539) |
21215 (5403) |
7534 (2675) |
11436 (3687) |
3335 (1285) |
10518 (2430) |
7784 (2252) |
6026 (1838) |
5'-end Alternative first exon |
14831 (4295) |
25028 (5927) |
8685 (2842) |
12271 (3567) |
6375 (2297) |
19282 (4080) |
12730 (3326) |
7313 (2302) |
 3'-endAlternative last exon |
6329 (1967) |
14647 (3584) |
6786 (2251) |
8976 (2641) |
3661 (1245) |
8154 (1967) |
5680 (1612) |
4232 (1297) |
Table 3. AS affecting protein function and Complex AS pattern.
| Human | Human | |
|---|---|---|
| Data set | Full-length cDNA | mRNA |
| AS affecting protein function total | 24249 (7273) |
36739 (9824) |
| Protein motif | 19837 (5918) |
30753 (7952) |
| GO | 11075 (3052) |
15897 (4556) |
| Subcellular localization signal | 19008 (5309) |
26384 (7626) |
| Transmembrane domain | 3521 (1105) |
6433 (1607) |
| Complex AS pattern total | 3998 (1218) |
11463 (2795) |
| Bridged | 1117 (229) |
4258 (757) |
| Nested | 2904 (1015) |
7582 (2223) |
| Multiple CDS | 113 (46) |
367 (125) |
Table 4. Equally-spliced variant (ESV) and conserved AS.
A. Human full-length cDNA| vs Mouse | |
|---|---|
| Data set | Full-length cDNA |
| ESV | 3060 (2636) |
| Conserved AS | 412 (196) |
B. Human mRNA
| vs Mouse | vs Rat | vs Chimpanzee | vs Macaque | vs Dog | |
|---|---|---|---|---|---|
| Data set | mRNA | RNA | RNA | RNA | RNA |
| ESV | 5071 (3979) |
2717 (2084) |
7679 (4266) |
7116 (3917) |
4261 (2961) |
| Conserved AS | 1148 (484) |
730 (292) |
5177 (1998) |
4894 (1880) |
1663 (654) |