Statistics
Table 1. Representative AS variant (RASV).
| Human | Human | Mouse | Mouse | Chimpanzee | Macaque | Rat | Dog | |
|---|---|---|---|---|---|---|---|---|
| Data set | full-length cDNA | mRNA | full-length cDNA | mRNA | RNA | RNA | RNA | RNA |
| Transcript total (Locus) |
66050 (25806) |
217322 (42353) |
122554 (41748) |
252615 (75348) |
92763 (32631) |
94104 (35112) |
120178 (44077) |
63471 (23757) |
| RASV (Locus) |
20803 (7801) |
49308 (13704) |
29955 (10237) |
38661 (12025) |
44687 (11557) |
35123 (10651) |
22353 (8500) |
29806 (9736) |
Table 2. AS pattern of RASV.
| Human | Human | Mouse | Mouse | Chimpanzee | Macaque | Rat | Dog | |
|---|---|---|---|---|---|---|---|---|
| Data set | full-length cDNA | mRNA | full-length cDNA | mRNA | RNA | RNA | RNA | RNA |
 Cassette exon - including multiple cassette |
9821 (3677) |
30048 (7970) |
11183 (3707) |
16298 (4819) |
30364 (6804) |
21964 (6039) |
11345 (3901) |
17305 (4711) |
 Alternative 3' splice |
6170 (2269) |
18376 (4944) |
5797 (2041) |
9392 (2942) |
19569 (4495) |
15425 (4451) |
9248 (3341) |
15111 (4244) |
 Alternative 5' splice |
5992 (2274) |
18616 (5150) |
6357 (2225) |
9750 (3067) |
20826 (4921) |
16161 (4729) |
9511 (3427) |
16107 (4602) |
 Mutually exclusive exon |
608 (251) |
2968 (915) |
561 (193) |
1062 (317) |
4887 (1145) |
4307 (1387) |
2792 (951) |
4132 (1012) |
 Retained intron |
6180 (2287) |
15033 (4303) |
7615 (2716) |
11368 (3685) |
10359 (2430) |
7599 (2252) |
3298 (1285) |
5999 (1838) |
5'-end Alternative first exon |
6700 (2495) |
18581 (5046) |
8757 (2861) |
12260 (3571) |
19354 (4108) |
12745 (3346) |
6365 (2301) |
7272 (2312) |
 3'-endAlternative last exon |
2512 (952) |
10920 (3009) |
6847 (2265) |
8990 (2651) |
8259 (2003) |
5775 (1648) |
3673 (1252) |
4248 (1309) |
Table 3. AS affecting protein function and Complex AS pattern.
| Human | Human | |
|---|---|---|
| Data set | full-length cDNA | mRNA |
| AS affecting protein function total | 7029 (2837) |
19862 (6483) |
| Protein motif | 5437 (2202) |
16834 (5297) |
| GO | 1976 (737) |
6172 (2095) |
| Subcellular localization signal | 4510 (1739) |
11422 (4094) |
| Transmembrane domain | 956 (393) |
3593 (1063) |
| Complex AS pattern total | 749 (283) |
3797 (1071) |
| Bridged | 170 (44) |
1393 (276) |
| Nested | 581 (244) |
2442 (830) |
| Multiple CDS | 14 (7) |
83 (30) |
Table 4. Equally-spliced variant (ESV) and conserved AS.
A. Human full-length cDNA| vs Mouse | |
|---|---|
| Data set | full-length cDNA |
| ESV | 1688 (1510) |
| Conserved AS | 194 (93) |
B. Human mRNA
| vs Mouse | vs Chimpanzee | vs Macaque | vs Rat | vs Dog | |
|---|---|---|---|---|---|
| Data set | mRNA | RNA | RNA | RNA | RNA |
| ESV | 3828 (3065) |
6920 (4009) |
6561 (3686) |
2255 (1769) |
3507 (2518) |
| Conserved AS | 827 (362) |
4504 (1793) |
4465 (1746) |
564 (229) |
1304 (516) |