bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
B.taurus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSBTAT00000034185
genome : 26,582,475 - 26,644,708 (62,234)
query : 1 - 873 (873/873)
3 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
BC134608
Representative transcript
genome : 26,582,508 - 26,645,402 (62,895)
query : 1 - 1,542 (1,542/1,643)
3 exons
identity = 0.993
5'(0.984;0.993)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000025795
Pan
sp. (Chimpanzee) : XM_001141113
Pongo
sp. (Orangutan) : ENSPPYT00000000174
Macaca
sp. (Macaque) : XM_001090058
Rattus
sp. (Rat) : XM_001061318
Canis
sp. (Dog) : XM_849602
Equus
sp. (Horse) : XM_001491484
Monodelphis
sp. (Opossum) : XM_001376966
Gallus
sp. (Chicken) : XM_001232617
Danio
sp. (Zebrafish) : NM_001030171
Oryzias
sp. (Medaka) : ENSORLT00000021422
Tetraodon
sp. (Tetraodon) : GSTENT00020683001
NM_001083770
genome : 26,582,508 - 26,645,402 (62,895)
query : 1 - 1,542 (1,542/1,643)
3 exons
identity = 0.993
5'(0.984;0.993)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000047251
Representative transcript
genome : 26,664,381 - 26,664,782 (402)
query : 1 - 402 (402/402)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000025755
Representative transcript
genome : 26,675,385 - 26,774,787 (99,403)
query : 1 - 2,835 (2,835/2,835)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000245485
Pan
sp. (Chimpanzee) : XM_001141527
Pongo
sp. (Orangutan) : ENSPPYT00000000173
Macaca
sp. (Macaque) : XM_001089940
Mus
sp. (Mouse) : AK039369
Rattus
sp. (Rat) : AJ242781
Canis
sp. (Dog) : XM_547504
Monodelphis
sp. (Opossum) : XM_001376990
Gallus
sp. (Chicken) : XM_415039
Danio
sp. (Zebrafish) : XM_686383
XM_613550
genome : 26,675,385 - 26,774,787 (99,403)
query : 1 - 2,829 (2,829/2,829)
7 exons
identity = 0.998
3'(1.000;1.000;1.000;0.978;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
BC112811
Representative transcript
genome : 26,884,000 - 26,905,046 (21,047)
query : 23 - 2,190 (2,168/2,205)
13 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.990;1.000;1.000;1.000;0.996)3'
coverage = 0.990
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000425096
Pan
sp. (Chimpanzee) : XM_001142009
Pongo
sp. (Orangutan) : CR858231
Macaca
sp. (Macaque) : XM_001087264
Mus
sp. (Mouse) : AK148111
Rattus
sp. (Rat) : X99267
Equus
sp. (Horse) : XM_001489714
Monodelphis
sp. (Opossum) : ENSMODT00000007728
Gallus
sp. (Chicken) : AY486554
Danio
sp. (Zebrafish) : AF178539
Tetraodon
sp. (Tetraodon) : CR647350
Takifugu
sp. (Fugu) : SINFRUT00000172776
NM_174440
genome : 26,884,000 - 26,905,046 (21,047)
query : 23 - 2,190 (2,168/2,205)
13 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.990;1.000;1.000;1.000;0.996)3'
coverage = 0.990
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000017565
genome : 26,884,843 - 26,905,043 (20,201)
query : 1 - 2,043 (2,043/2,043)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AF038937
genome : 26,884,884 - 26,905,045 (20,162)
query : 1 - 2,004 (2,004/2,004)
11 exons
identity = 0.994
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.990;
1.000;1.000;0.992;0.986)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
BC114164
Representative transcript
genome : 26,957,896 - 27,005,314 (47,419)
query : 2 - 2,888 (2,887/2,903)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000032262
Pan
sp. (Chimpanzee) : XM_514248
Pongo
sp. (Orangutan) : ENSPPYT00000000170
Macaca
sp. (Macaque) : XM_001089241
Mus
sp. (Mouse) : AK014605
Rattus
sp. (Rat) : BC091388
Canis
sp. (Dog) : XM_537230
Equus
sp. (Horse) : XM_001491544
Monodelphis
sp. (Opossum) : ENSMODT00000036706
Gallus
sp. (Chicken) : XM_415040
Danio
sp. (Zebrafish) : BC076083
Danio
sp. (Zebrafish) : XM_693745
Oryzias
sp. (Medaka) : ENSORLT00000021446
Tetraodon
sp. (Tetraodon) : CR678242
Takifugu
sp. (Fugu) : SINFRUT00000143815
NM_001046419
genome : 26,957,896 - 27,005,314 (47,419)
query : 2 - 2,888 (2,887/2,903)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000029167
genome : 26,957,896 - 27,005,291 (47,396)
query : 1 - 2,864 (2,864/2,864)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
BT026249
genome : 27,000,006 - 27,005,291 (5,286)
query : 1 - 1,979 (1,979/1,979)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
AAFC03046319
26606476-26677847 W -
50
26677848-26677897 N
AAFC03046317
26677898-26690851 W +
AAFC03047764
26690852-26736182 W -
AAFC03122879
26736183-26780316 W +
50
26780317-26780366 N
AAFC03047763
26780367-26813369 W -
AAFC03049591
26813370-26837000 W -
AAFC03047761
26837001-26841399 W +
280
26841400-26841679 N
AAFC03047762
26841680-26842988 W -
AAFC03049592
26842989-26864043 W -
50
26864044-26864093 N
AAFC03049590
26864094-26878619 W +
50
26878620-26878669 N
AAFC03049593
26878670-26925919 W -
50
26925920-26925969 N
AAFC03122880
26925970-26946764 W +
AAFC03093466
26946765-27006475 W +