bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
B.taurus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
BC142321
Representative transcript
genome : 35,801,862 - 35,818,136 (16,275)
query : 2 - 2,579 (2,578/2,681)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000486585
Pan
sp. (Chimpanzee) : XM_001146579
Pongo
sp. (Orangutan) : ENSPPYT00000000615
Macaca
sp. (Macaque) : XM_001100091
Mus
sp. (Mouse) : AK146751
Rattus
sp. (Rat) : ENSRNOT00000004097
Canis
sp. (Dog) : ENSCAFT00000023640
Canis
sp. (Dog) : XM_848956
Equus
sp. (Horse) : XM_001496565
Monodelphis
sp. (Opossum) : ENSMODT00000004861
Danio
sp. (Zebrafish) : BC093167
Tetraodon
sp. (Tetraodon) : GSTENT00003705001
Takifugu
sp. (Fugu) : SINFRUT00000160056
NM_001099085
genome : 35,801,862 - 35,818,136 (16,275)
query : 2 - 2,579 (2,578/2,681)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000023571
genome : 35,801,880 - 35,818,136 (16,257)
query : 1 - 2,560 (2,560/2,560)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
BC151753
Representative transcript
genome : 35,874,662 - 36,231,448 (356,787)
query : 2 - 1,849 (1,848/1,864)
15 exons
identity = 0.998
5'(0.987;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000025308
Pan
sp. (Chimpanzee) : XM_513998
Pongo
sp. (Orangutan) : ENSPPYT00000000612
Macaca
sp. (Macaque) : XM_001100178
Mus
sp. (Mouse) : AK147678
Rattus
sp. (Rat) : AF201839
Canis
sp. (Dog) : XM_856735
Equus
sp. (Horse) : XM_001492513
Monodelphis
sp. (Opossum) : ENSMODT00000004982
Gallus
sp. (Chicken) : XR_027041
Danio
sp. (Zebrafish) : NM_001128524
Oryzias
sp. (Medaka) : ENSORLT00000002352
Oryzias
sp. (Medaka) : ENSORLT00000012523
Tetraodon
sp. (Tetraodon) : GSTENT00019773001
Takifugu
sp. (Fugu) : SINFRUT00000160057
XR_028044
genome : 35,874,662 - 36,531,463 (656,802)
query : 1 - 2,862 (2,862/2,862)
20 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000017776
genome : 35,874,662 - 36,410,335 (535,674)
query : 1 - 2,039 (2,039/2,039)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000019044
genome : 35,874,820 - 36,521,186 (646,367)
query : 1 - 2,610 (2,610/2,610)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AAFC03055114
35800001-35817480 W +
AAFC03028343
35817481-35845007 W +
AAFC03055113
35845008-35849006 W -
217
35849007-35849223 N
AAFC03055112
35849224-35866119 W +
AAFC03028342
35866120-35891108 W +
589
35891109-35891697 N
AAFC03028341
35891698-35911743 W +
1532
35911744-35913275 N
AAFC03028339
35913276-35916853 W -
50
35916854-35916903 N
AAFC03028344
35916904-35956249 W +
1430
35956250-35957679 N
AAFC03028340
35957680-35981299 W +
AAFC03124137
35981300-35985841 W -
50
35985842-35985891 N
AAFC03124136
35985892-36014689 W +
AAFC03041726
36014690-36020625 W +
902
36020626-36021527 N
AAFC03041722
36021528-36025553 W +
50
36025554-36025603 N
AAFC03041721
36025604-36028498 W +
2162
36028499-36030660 N
AAFC03041725
36030661-36048487 W +
50
36048488-36048537 N
AAFC03041723
36048538-36055946 W -
5882
36055947-36061828 N
AAFC03041727
36061829-36178323 W -
AAFC03007615
36178324-36196910 W +
631
36196911-36197541 N
AAFC03007612
36197542-36199655 W +
119
36199656-36199774 N
AAFC03007614
36199775-36200000 W -