bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
B.taurus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_615470
Representative transcript
genome : 41,699,560 - 41,997,275 (297,716)
query : 1 - 1,462 (1,462/1,462)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000045739
genome : 41,854,789 - 41,995,186 (140,398)
query : 1 - 777 (777/777)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000045738
genome : 41,854,789 - 41,974,574 (119,786)
query : 1 - 417 (417/417)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000045737
Representative transcript
genome : 42,003,116 - 42,003,418 (303)
query : 1 - 303 (303/303)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000045960
Representative transcript
genome : 42,052,238 - 42,412,414 (360,177)
query : 1 - 127 (127/127)
2 exons
identity = 0.992
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_617347
Representative transcript
genome : 42,059,183 - 42,115,058 (55,876)
query : 1 - 3,705 (3,705/3,705)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000260342
Pan
sp. (Chimpanzee) : XM_001159210
Macaca
sp. (Macaque) : XM_001097585
Mus
sp. (Mouse) : AK122287
Rattus
sp. (Rat) : U44091
Canis
sp. (Dog) : XM_536734
Equus
sp. (Horse) : XM_001915530
Monodelphis
sp. (Opossum) : ENSMODT00000012173
Gallus
sp. (Chicken) : CR389452
Danio
sp. (Zebrafish) : XM_001922746
Oryzias
sp. (Medaka) : ENSORLT00000002363
Oryzias
sp. (Medaka) : ENSORLT00000007034
Tetraodon
sp. (Tetraodon) : GSTENT00027421001
Tetraodon
sp. (Tetraodon) : GSTENT00028214001
Takifugu
sp. (Fugu) : SINFRUT00000134617
ENSBTAT00000024320
genome : 42,060,404 - 42,115,058 (54,655)
query : 1 - 3,435 (3,435/3,435)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000001840
Representative transcript
genome : 42,123,399 - 42,145,294 (21,896)
query : 1 - 2,515 (2,515/2,515)
9 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.940;
1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000070174
Pan
sp. (Chimpanzee) : ENSPTRT00000000238
Pongo
sp. (Orangutan) : ENSPPYT00000002298
Macaca
sp. (Macaque) : XM_001118297
Mus
sp. (Mouse) : AK082651
Rattus
sp. (Rat) : BC093599
Canis
sp. (Dog) : XM_546757
Equus
sp. (Horse) : ENSECAT00000015119
Monodelphis
sp. (Opossum) : XM_001362245
Oryzias
sp. (Medaka) : ENSORLT00000005260
Tetraodon
sp. (Tetraodon) : GSTENT00027566001
Takifugu
sp. (Fugu) : SINFRUT00000170333
XM_590623
genome : 42,123,399 - 42,145,288 (21,890)
query : 1 - 2,503 (2,503/2,503)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
AAFC03121970
41800001-41814010 W -
50
41814011-41814060 N
AAFC03121971
41814061-41815132 W -
AAFC03015433
41815133-41854404 W -
50
41854405-41854454 N
AAFC03015429
41854455-41874666 W +
50
41874667-41874716 N
AAFC03062006
41874717-41931530 W -
50
41931531-41931580 N
AAFC03062007
41931581-42028762 W +
50
42028763-42028812 N
AAFC03062004
42028813-42037546 W -
3014
42037547-42040560 N
AAFC03062005
42040561-42059714 W +
50
42059715-42059764 N
AAFC03117213
42059765-42069647 W -
50
42069648-42069697 N
AAFC03130581
42069698-42075273 W -
50
42075274-42075323 N
AAFC03125682
42075324-42116381 W +
AAFC03079660
42116382-42117740 W -
AAFC03079668
42117741-42119735 W -
500
42119736-42120235 N
AAFC03116581
42120236-42125585 W +
AAFC03079666
42125586-42140951 W +
50
42140952-42141001 N
AAFC03079661
42141002-42164509 W -
102
42164510-42164611 N
AAFC03116579
42164612-42191690 W -
1244
42191691-42192934 N
AAFC03116580
42192935-42200000 W +