bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
B.taurus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSBTAT00000014191
Representative transcript
genome : 57,731,140 - 57,890,408 (159,269)
query : 1 - 2,537 (2,537/2,537)
19 exons
identity = 0.999
5'(1.000;0.968;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000053121
Pan
sp. (Chimpanzee) : XM_001155266
Pongo
sp. (Orangutan) : ENSPPYT00000000558
Macaca
sp. (Macaque) : AB168698
Mus
sp. (Mouse) : AK029993
Rattus
sp. (Rat) : BC105626
Canis
sp. (Dog) : XM_845057
Equus
sp. (Horse) : XM_001498552
Monodelphis
sp. (Opossum) : ENSMODT00000007620
Gallus
sp. (Chicken) : AJ720434
Danio
sp. (Zebrafish) : BC152664
Oryzias
sp. (Medaka) : ENSORLT00000018316
Takifugu
sp. (Fugu) : SINFRUT00000178522
ENSBTAT00000034000
genome : 57,731,140 - 57,890,408 (159,269)
query : 1 - 2,537 (2,537/2,537)
19 exons
identity = 0.997
5'(1.000;0.948;0.976;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
BC114763
Representative transcript
genome : 57,828,683 - 57,852,874 (24,192)
query : 1 - 2,553 (2,553/2,576)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000252322
Pan
sp. (Chimpanzee) : XM_001155648
Pongo
sp. (Orangutan) : ENSPPYT00000000560
Macaca
sp. (Macaque) : ENSMMUT00000024691
Mus
sp. (Mouse) : AK142319
Rattus
sp. (Rat) : XM_001054429
Canis
sp. (Dog) : XM_845084
Equus
sp. (Horse) : XM_001498646
Monodelphis
sp. (Opossum) : XR_030241
Gallus
sp. (Chicken) : BX930998
Danio
sp. (Zebrafish) : BC151871
Oryzias
sp. (Medaka) : ENSORLT00000007103
Oryzias
sp. (Medaka) : ENSORLT00000018330
Tetraodon
sp. (Tetraodon) : GSTENT00020519001
Takifugu
sp. (Fugu) : SINFRUT00000129054
NM_001075426
genome : 57,828,683 - 57,852,874 (24,192)
query : 1 - 2,553 (2,553/2,576)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000014193
genome : 57,828,686 - 57,852,874 (24,189)
query : 1 - 2,550 (2,550/2,550)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000018604
genome : 57,981,806 - 58,023,232 (41,427)
query : 1 - 1,456 (1,456/1,456)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
BC118180
Representative transcript
genome : 57,981,806 - 58,018,926 (37,121)
query : 1 - 1,730 (1,730/1,788)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.994;1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000000192
Pan
sp. (Chimpanzee) : XM_514027
Pongo
sp. (Orangutan) : ENSPPYT00000000557
Macaca
sp. (Macaque) : XM_001115532
Mus
sp. (Mouse) : BC023737
Rattus
sp. (Rat) : XM_001068245
Canis
sp. (Dog) : ENSCAFT00000022098
Equus
sp. (Horse) : XM_001916737
Monodelphis
sp. (Opossum) : ENSMODT00000007653
Gallus
sp. (Chicken) : AJ720888
Danio
sp. (Zebrafish) : BC115339
Oryzias
sp. (Medaka) : ENSORLT00000018248
Tetraodon
sp. (Tetraodon) : GSTENT00020514001
Takifugu
sp. (Fugu) : NM_001048041
NM_001076185
genome : 57,981,806 - 58,018,926 (37,121)
query : 1 - 1,730 (1,730/1,788)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.994;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000044368
genome : 57,981,806 - 58,018,925 (37,120)
query : 1 - 1,729 (1,729/1,729)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000018609
genome : 58,029,312 - 58,057,298 (27,987)
query : 1 - 1,839 (1,839/1,839)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
BC126733
Representative transcript
genome : 58,029,322 - 58,057,299 (27,978)
query : 1 - 1,830 (1,830/1,856)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000246809
Pan
sp. (Chimpanzee) : XM_001156511
Pongo
sp. (Orangutan) : ENSPPYT00000000556
Macaca
sp. (Macaque) : ENSMMUT00000008765
Mus
sp. (Mouse) : AK172355
Rattus
sp. (Rat) : BC087678
Canis
sp. (Dog) : XM_547446
Equus
sp. (Horse) : XM_001494447
Monodelphis
sp. (Opossum) : XM_001374022
Gallus
sp. (Chicken) : XM_422270
Danio
sp. (Zebrafish) : NM_001128266
Oryzias
sp. (Medaka) : ENSORLT00000021490
Tetraodon
sp. (Tetraodon) : GSTENT00028834001
Takifugu
sp. (Fugu) : SINFRUT00000143036
NM_001080376
genome : 58,029,322 - 58,057,299 (27,978)
query : 1 - 1,830 (1,830/1,856)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_866988
genome : 58,069,191 - 58,091,947 (22,757)
query : 1 - 3,635 (3,635/3,635)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001253284
Representative transcript
genome : 58,069,212 - 58,164,837 (95,626)
query : 1 - 3,851 (3,851/3,851)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000558720
Pan
sp. (Chimpanzee) : ENSPTRT00000003126
Pongo
sp. (Orangutan) : ENSPPYT00000000554
Macaca
sp. (Macaque) : ENSMMUT00000044774
Mus
sp. (Mouse) : DQ084361
Canis
sp. (Dog) : XM_537174
Equus
sp. (Horse) : ENSECAT00000006120
Monodelphis
sp. (Opossum) : XM_001365858
Gallus
sp. (Chicken) : CR391707
Danio
sp. (Zebrafish) : XM_001923465
Oryzias
sp. (Medaka) : ENSORLT00000009306
Tetraodon
sp. (Tetraodon) : GSTENT00028837001
Takifugu
sp. (Fugu) : SINFRUT00000176586
XM_879525
genome : 58,069,212 - 58,091,935 (22,724)
query : 1 - 3,539 (3,539/3,539)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000020006
genome : 58,069,310 - 58,087,291 (17,982)
query : 1 - 3,096 (3,096/3,096)
12 exons
identity = 0.995
3'(1.000;0.986;0.966;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AAFC03033884
57800001-57883984 W -
AAFC03087841
57883985-57917939 W -
50
57917940-57917989 N
AAFC03033882
57917990-57919910 W -
AAFC03087842
57919911-58054777 W +
AAFC03085010
58054778-58066707 W -
90
58066708-58066797 N
AAFC03085009
58066798-58120286 W +
AAFC03083806
58120287-58128217 W +
AAFC03083807
58128218-58181526 W +
20286
58181527-58200000 N