bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
C.familiaris
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSCAFT00000022666
Representative transcript
genome : 25,492,871 - 25,781,226 (288,356)
query : 1 - 9,960 (9,960/9,960)
65 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000077028
Pan
sp. (Chimpanzee) : XM_507839
Pongo
sp. (Orangutan) : ENSPPYT00000002834
Macaca
sp. (Macaque) : XR_013331
Mus
sp. (Mouse) : AJ888001
Rattus
sp. (Rat) : AB053447
Equus
sp. (Horse) : XM_001917698
Bos
sp. (Cow) : ENSBTAT00000028652
Monodelphis
sp. (Opossum) : XM_001365007
Gallus
sp. (Chicken) : XM_421595
Danio
sp. (Zebrafish) : ENSDART00000016602
Oryzias
sp. (Medaka) : ENSORLT00000016841
Takifugu
sp. (Fugu) : SINFRUT00000146814
XM_856348
genome : 25,782,194 - 25,814,947 (32,754)
query : 1 - 2,782 (2,782/2,782)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_856497
Representative transcript
genome : 25,782,194 - 25,814,947 (32,754)
query : 1 - 2,791 (2,791/2,791)
14 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.924;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000191128
Pan
sp. (Chimpanzee) : XM_507840
Pongo
sp. (Orangutan) : CR861454
Macaca
sp. (Macaque) : AB171003
Mus
sp. (Mouse) : AK167902
Rattus
sp. (Rat) : BC061759
Equus
sp. (Horse) : XM_001503764
Bos
sp. (Cow) : BC105409
Monodelphis
sp. (Opossum) : XM_001365272
Gallus
sp. (Chicken) : AF108656
Danio
sp. (Zebrafish) : AF108655
Oryzias
sp. (Medaka) : ENSORLT00000014344
Tetraodon
sp. (Tetraodon) : CR686651
Takifugu
sp. (Fugu) : SINFRUT00000178536
XM_856376
genome : 25,782,194 - 25,814,894 (32,701)
query : 1 - 1,877 (1,877/1,877)
8 exons
identity = 0.994
3'(1.000;1.000;1.000;1.000;1.000;0.887;1.000;
1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_536382
genome : 25,782,194 - 25,798,372 (16,179)
query : 1 - 2,695 (2,695/2,695)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_845373
genome : 25,782,194 - 25,798,372 (16,179)
query : 1 - 2,695 (2,695/2,695)
13 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.924;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_856438
genome : 25,782,194 - 25,798,372 (16,179)
query : 1 - 2,683 (2,683/2,683)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000022871
genome : 25,782,269 - 25,798,393 (16,125)
query : 1 - 1,662 (1,662/1,662)
13 exons
identity = 0.989
3'(0.877;0.973;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000022878
genome : 25,783,108 - 25,814,881 (31,774)
query : 1 - 1,802 (1,802/1,802)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000022867
genome : 25,783,335 - 25,798,396 (15,062)
query : 1 - 1,587 (1,587/1,587)
13 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.924;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000022881
Representative transcript
genome : 25,817,973 - 25,818,817 (845)
query : 1 - 837 (837/837)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
contig_11719
25778994-25790188 W +
1
25790189-25790189 N
contig_11720
25790190-25814964 W +
512
25814965-25815476 N
contig_11721
25815477-25818993 W +