bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
C.familiaris
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_849632
Representative transcript
genome : 41,883,045 - 41,905,314 (22,270)
query : 4 - 903 (900/903)
5 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.997
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000252917
Pan
sp. (Chimpanzee) : XM_001138156
Pongo
sp. (Orangutan) : ENSPPYT00000000185
Macaca
sp. (Macaque) : ENSMMUT00000008117
Mus
sp. (Mouse) : AK131943
Rattus
sp. (Rat) : XM_001061810
Bos
sp. (Cow) : XM_613627
Monodelphis
sp. (Opossum) : XM_001376637
Gallus
sp. (Chicken) : AB031398
Oryzias
sp. (Medaka) : EF206722
Tetraodon
sp. (Tetraodon) : GSTENT00018477001
Takifugu
sp. (Fugu) : SINFRUT00000154042
XM_547510
Representative transcript
genome : 41,907,899 - 41,934,031 (26,133)
query : 7 - 2,565 (2,559/2,565)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.998
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000040995
Pan
sp. (Chimpanzee) : ENSPTRT00000003734
Macaca
sp. (Macaque) : XM_001089796
Mus
sp. (Mouse) : AK144899
Rattus
sp. (Rat) : ENSRNOT00000004519
Bos
sp. (Cow) : BC151398
Monodelphis
sp. (Opossum) : XM_001376602
Danio
sp. (Zebrafish) : BC139665
Danio
sp. (Zebrafish) : XM_695024
Oryzias
sp. (Medaka) : ENSORLT00000021166
Takifugu
sp. (Fugu) : SINFRUT00000147037
Takifugu
sp. (Fugu) : SINFRUT00000173110
ENSCAFT00000025640
genome : 41,912,398 - 41,934,031 (21,634)
query : 1 - 2,475 (2,475/2,475)
22 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.942;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_537235
Representative transcript
genome : 41,934,812 - 41,954,423 (19,612)
query : 1 - 2,164 (2,164/2,164)
8 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000335223
Pan
sp. (Chimpanzee) : XR_022976
Pongo
sp. (Orangutan) : CR860921
Macaca
sp. (Macaque) : AB179125
Mus
sp. (Mouse) : BC061493
Rattus
sp. (Rat) : BC061568
Rattus
sp. (Rat) : ENSRNOT00000029787
Equus
sp. (Horse) : ENSECAT00000020870
Bos
sp. (Cow) : BC102117
Monodelphis
sp. (Opossum) : XM_001376568
Gallus
sp. (Chicken) : XM_419386
Gallus
sp. (Chicken) : XM_419497
Danio
sp. (Zebrafish) : BC045930
Danio
sp. (Zebrafish) : XM_694904
Oryzias
sp. (Medaka) : ENSORLT00000015053
Tetraodon
sp. (Tetraodon) : GSTENT00030811001
Takifugu
sp. (Fugu) : SINFRUT00000148495
ENSCAFT00000037977
genome : 41,935,360 - 41,954,423 (19,064)
query : 1 - 1,616 (1,616/1,616)
8 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_858879
genome : 41,935,366 - 41,954,423 (19,058)
query : 1 - 1,571 (1,571/1,571)
8 exons
identity = 0.999
3'(1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_858896
genome : 41,935,368 - 41,954,423 (19,056)
query : 1 - 1,482 (1,482/1,482)
7 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000025645
genome : 41,935,611 - 41,954,423 (18,813)
query : 1 - 1,335 (1,335/1,335)
8 exons
identity = 0.996
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
contig_26224
41900965-41940964 W +