bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
C.familiaris
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_849736
Representative transcript
genome : 43,142,022 - 43,172,209 (30,188)
query : 1 - 1,835 (1,835/1,835)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000004102
Pan
sp. (Chimpanzee) : XM_001135277
Pongo
sp. (Orangutan) : ENSPPYT00000000200
Macaca
sp. (Macaque) : XM_001097187
Mus
sp. (Mouse) : BC094542
Rattus
sp. (Rat) : ENSRNOT00000000074
Equus
sp. (Horse) : XM_001915204
Bos
sp. (Cow) : BC111213
Monodelphis
sp. (Opossum) : XM_001367823
Gallus
sp. (Chicken) : XM_419393
ENSCAFT00000025971
genome : 43,142,735 - 43,172,194 (29,460)
query : 1 - 1,083 (1,083/1,083)
5 exons
identity = 0.973
3'(1.000;1.000;1.000;1.000;0.889)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000025958
Representative transcript
genome : 43,154,299 - 43,155,684 (1,386)
query : 1 - 1,380 (1,380/1,380)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000041218
genome : 43,155,535 - 43,155,621 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000041285
genome : 43,155,535 - 43,155,621 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000041429
genome : 43,155,535 - 43,155,621 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000041434
genome : 43,155,535 - 43,155,621 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000041536
genome : 43,155,535 - 43,155,621 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000034810
Representative transcript
genome : 43,156,186 - 43,156,292 (107)
query : 1 - 107 (107/107)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
contig_26244
43137115-43172399 W +
1637
43172400-43174036 N
contig_26245
43174037-43177114 W +