bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
D.rerio
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
BC134170
Representative transcript
genome : 27,029,401 - 27,040,381 (10,981)
query : 1 - 1,560 (1,560/1,584)
8 exons
identity = 0.998
3'(1.000;0.996;0.995;1.000;1.000;1.000;1.000;
0.996)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000059351
Pan
sp. (Chimpanzee) : XM_001140558
Macaca
sp. (Macaque) : XM_001091471
Mus
sp. (Mouse) : AK030371
Rattus
sp. (Rat) : AY336075
Canis
sp. (Dog) : XM_849612
Equus
sp. (Horse) : XM_001491159
Monodelphis
sp. (Opossum) : XM_001368230
Gallus
sp. (Chicken) : AJ720620
Danio
sp. (Zebrafish) : BC054676
Oryzias
sp. (Medaka) : ENSORLT00000017278
Tetraodon
sp. (Tetraodon) : GSTENT00030383001
Takifugu
sp. (Fugu) : SINFRUT00000144740
NM_001089387
genome : 27,029,401 - 27,040,381 (10,981)
query : 1 - 1,560 (1,560/1,584)
8 exons
identity = 0.998
3'(1.000;0.996;0.995;1.000;1.000;1.000;1.000;
0.996)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000032827
genome : 27,029,399 - 27,040,381 (10,983)
query : 1 - 1,562 (1,562/1,562)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
BC091816
Representative transcript
genome : 27,041,605 - 27,042,960 (1,356)
query : 4 - 1,360 (1,357/1,435)
1 exon
identity = 0.988
3'(0.988)5'
coverage = 0.998
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000100448
Pan
sp. (Chimpanzee) : XM_525729
Pongo
sp. (Orangutan) : ENSPPYT00000014543
Macaca
sp. (Macaque) : XR_011821
Mus
sp. (Mouse) : AK144700
Rattus
sp. (Rat) : J05579
Canis
sp. (Dog) : XM_857565
Equus
sp. (Horse) : ENSECAT00000024524
Equus
sp. (Horse) : XM_001501558
Bos
sp. (Cow) : X83508
Monodelphis
sp. (Opossum) : XM_001380693
Gallus
sp. (Chicken) : D13221
Oryzias
sp. (Medaka) : ENSORLT00000001340
Tetraodon
sp. (Tetraodon) : GSTENT00012569001
Takifugu
sp. (Fugu) : SINFRUT00000173565
XM_683891
genome : 27,041,602 - 27,075,119 (33,518)
query : 1 - 5,470 (5,470/5,470)
36 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000077553
genome : 27,043,016 - 27,075,080 (32,065)
query : 1 - 4,005 (4,005/4,005)
36 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Zv7_scaffold1706
27014891-27054890 W +