bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
D.rerio
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_693745
Representative transcript
genome : 5,340,763 - 5,361,545 (20,783)
query : 1 - 2,585 (2,585/2,585)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000032262
Pan
sp. (Chimpanzee) : XM_514248
Pongo
sp. (Orangutan) : ENSPPYT00000000170
Macaca
sp. (Macaque) : XM_001089241
Mus
sp. (Mouse) : AK014605
Rattus
sp. (Rat) : BC091388
Canis
sp. (Dog) : XM_537230
Equus
sp. (Horse) : XM_001491544
Bos
sp. (Cow) : BC114164
Monodelphis
sp. (Opossum) : ENSMODT00000036706
Gallus
sp. (Chicken) : XM_415040
Danio
sp. (Zebrafish) : BC076083
Oryzias
sp. (Medaka) : ENSORLT00000021446
Tetraodon
sp. (Tetraodon) : CR678242
Takifugu
sp. (Fugu) : SINFRUT00000143815
ENSDART00000049617
genome : 5,343,136 - 5,360,892 (17,757)
query : 1 - 1,422 (1,422/1,422)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Zv7_scaffold1680
5343154-5359153 W +
Dr000347
(CAGAG)n
AT_rich
LOOPERN1_DR
LOOPERN1_DR
TZF28
LOOPERN1_DR
AT_rich
(TA)n
MOSAT_DR
MOSAT_DR
Polinton-1N1_DR
HATN17_DR
AT_rich
HATN12_DR
HATN12_DR
T-rich
AT_rich
TDR9
HE1_DR1
Dr000094
HE1_DR1
CR1-1_DR
CR1-1_DR
Dr000281
ANGEL
Dr000093
Dr000093
Dr000774
HATN13_DR
DNA8-8_DR
HATN13_DR
TDR18