bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
D.rerio
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSDART00000091818
genome : 7,589,009 - 7,609,872 (20,864)
query : 1 - 4,824 (4,824/4,824)
16 exons
identity = 0.995
5'(0.992;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_686015
Representative transcript
genome : 7,589,009 - 7,609,872 (20,864)
query : 1 - 4,821 (4,821/4,821)
16 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000074309
Pan
sp. (Chimpanzee) : XM_001145331
Mus
sp. (Mouse) : AK147643
Mus
sp. (Mouse) : BC049966
Rattus
sp. (Rat) : ENSRNOT00000024412
Canis
sp. (Dog) : XM_541170
Equus
sp. (Horse) : XM_001914699
Bos
sp. (Cow) : ENSBTAT00000006700
Monodelphis
sp. (Opossum) : XM_001371183
Gallus
sp. (Chicken) : CR391709
Danio
sp. (Zebrafish) : NM_001045095
Oryzias
sp. (Medaka) : ENSORLT00000018572
Tetraodon
sp. (Tetraodon) : GSTENT00023078001
Tetraodon
sp. (Tetraodon) : GSTENT00035735001
Takifugu
sp. (Fugu) : SINFRUT00000143662
Takifugu
sp. (Fugu) : SINFRUT00000168784
BC092773
Representative transcript
genome : 7,612,929 - 7,629,163 (16,235)
query : 1 - 1,480 (1,480/1,496)
13 exons
identity = 0.998
5'(1.000;1.000;0.986;0.993;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000422715
Pan
sp. (Chimpanzee) : XM_001169507
Pongo
sp. (Orangutan) : ENSPPYT00000019808
Mus
sp. (Mouse) : BC068251
Rattus
sp. (Rat) : XM_001055616
Canis
sp. (Dog) : ENSCAFT00000000298
Equus
sp. (Horse) : ENSECAT00000025341
Bos
sp. (Cow) : ENSBTAT00000020271
Monodelphis
sp. (Opossum) : ENSMODT00000022241
Gallus
sp. (Chicken) : BX930320
Tetraodon
sp. (Tetraodon) : GSTENT00035734001
Takifugu
sp. (Fugu) : SINFRUT00000143659
Takifugu
sp. (Fugu) : SINFRUT00000178976
NM_001017841
genome : 7,612,929 - 7,629,163 (16,235)
query : 1 - 1,480 (1,480/1,496)
13 exons
identity = 0.998
5'(1.000;1.000;0.986;0.993;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000064665
genome : 7,612,929 - 7,629,170 (16,242)
query : 1 - 1,487 (1,487/1,487)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
DQ189091
Representative transcript
genome : 7,630,320 - 7,662,274 (31,955)
query : 1 - 3,211 (3,211/3,221)
20 exons
identity = 0.992
3'(0.986;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;0.964;0.971;0.991;0.983)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000248084
Pan
sp. (Chimpanzee) : XM_001170621
Pongo
sp. (Orangutan) : ENSPPYT00000019821
Macaca
sp. (Macaque) : AB178994
Mus
sp. (Mouse) : BC065146
Rattus
sp. (Rat) : AY647140
Canis
sp. (Dog) : XM_533417
Equus
sp. (Horse) : XM_001503523
Bos
sp. (Cow) : BC151742
Monodelphis
sp. (Opossum) : ENSMODT00000022187
Gallus
sp. (Chicken) : BX935410
Tetraodon
sp. (Tetraodon) : GSTENT00035733001
Takifugu
sp. (Fugu) : SINFRUT00000143655
NM_001077561
genome : 7,630,320 - 7,662,274 (31,955)
query : 1 - 3,211 (3,211/3,221)
20 exons
identity = 0.992
3'(0.986;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;0.964;0.971;0.991;0.983)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000064668
genome : 7,630,320 - 7,662,274 (31,955)
query : 1 - 3,221 (3,221/3,221)
20 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.973;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.986)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000105290
genome : 7,676,217 - 7,678,653 (2,437)
query : 13 - 861 (849/861)
2 exons
identity = 0.998
5'(1.000;0.997)3'
coverage = 0.986
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_684862
Representative transcript
genome : 7,678,171 - 7,687,592 (9,422)
query : 1 - 2,364 (2,364/2,364)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.991)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001920396
Representative transcript
genome : 7,693,344 - 7,704,728 (11,385)
query : 1 - 2,265 (2,265/2,265)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
AF132445
genome : 7,708,634 - 7,713,343 (4,710)
query : 9 - 1,294 (1,286/1,315)
4 exons
identity = 0.995
3'(0.992;0.996;1.000;0.996)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
NM_130961
genome : 7,708,634 - 7,713,343 (4,710)
query : 9 - 1,294 (1,286/1,315)
4 exons
identity = 0.995
3'(0.992;0.996;1.000;0.996)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
BC097092
Representative transcript
genome : 7,708,634 - 7,713,375 (4,742)
query : 1 - 1,318 (1,318/1,336)
4 exons
identity = 0.996
3'(0.994;0.996;1.000;0.997)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000010792
Pan
sp. (Chimpanzee) : XM_514238
Pongo
sp. (Orangutan) : ENSPPYT00000000182
Macaca
sp. (Macaque) : ENSMMUT00000008117
Mus
sp. (Mouse) : AK131960
Rattus
sp. (Rat) : AY758558
Canis
sp. (Dog) : XM_547508
Equus
sp. (Horse) : XM_001915014
Monodelphis
sp. (Opossum) : XM_001376637
Danio
sp. (Zebrafish) : AF172089
Oryzias
sp. (Medaka) : EF206722
Tetraodon
sp. (Tetraodon) : GSTENT00018477001
Takifugu
sp. (Fugu) : SINFRUT00000154042
ENSDART00000064678
genome : 7,708,628 - 7,713,324 (4,697)
query : 16 - 1,288 (1,273/1,288)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.988
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_691225
Representative transcript
genome : 7,724,117 - 7,887,423 (163,307)
query : 1 - 5,831 (5,831/5,831)
37 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000255935
Pan
sp. (Chimpanzee) : XM_001146567
Pongo
sp. (Orangutan) : ENSPPYT00000003706
Macaca
sp. (Macaque) : AB169349
Mus
sp. (Mouse) : BC046418
Rattus
sp. (Rat) : ENSRNOT00000038016
Canis
sp. (Dog) : ENSCAFT00000022480
Equus
sp. (Horse) : ENSECAT00000010459
Bos
sp. (Cow) : BC149211
Gallus
sp. (Chicken) : CR523827
Oryzias
sp. (Medaka) : ENSORLT00000022742
Tetraodon
sp. (Tetraodon) : GSTENT00008418001
Takifugu
sp. (Fugu) : SINFRUT00000180699
H.sapiens
(Human) : HIT000500360
Pan
sp. (Chimpanzee) : XR_020222
Pongo
sp. (Orangutan) : ENSPPYT00000000169
Macaca
sp. (Macaque) : AB179174
Mus
sp. (Mouse) : AK138649
Rattus
sp. (Rat) : AF021935
Canis
sp. (Dog) : XM_858531
Equus
sp. (Horse) : XM_001490044
Bos
sp. (Cow) : ENSBTAT00000029173
Monodelphis
sp. (Opossum) : XM_001368345
Danio
sp. (Zebrafish) : BC155804
Oryzias
sp. (Medaka) : ENSORLT00000020132
Tetraodon
sp. (Tetraodon) : GSTENT00018476001
Takifugu
sp. (Fugu) : SINFRUT00000181336
ENSDART00000081651
genome : 7,724,797 - 7,887,423 (162,627)
query : 1 - 5,139 (5,139/5,139)
36 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.906;0.928;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
BC114270
Representative transcript
genome : 7,926,658 - 7,988,915 (62,258)
query : 1 - 1,397 (1,397/1,422)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000105283
genome : 7,926,658 - 7,988,925 (62,268)
query : 1 - 1,406 (1,406/1,406)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_684826
genome : 7,928,101 - 7,988,925 (60,825)
query : 19 - 1,365 (1,347/1,365)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.987
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Zv7_scaffold1682
7605770-7906830 W +
100
7906831-7906930 N
Zv7_scaffold1683
7906931-7991560 W +
100
7991561-7991660 N
Zv7_scaffold1684
7991661-8005769 W +