bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
D.rerio
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
BC139635
genome : 49,934,312 - 49,995,744 (61,433)
query : 1 - 2,610 (2,610/2,651)
18 exons
identity = 0.970
3'(1.000;1.000;1.000;0.988;1.000;1.000)5'
coverage = 0.997
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
NM_001044821
genome : 49,934,312 - 49,995,744 (61,433)
query : 1 - 2,610 (2,610/2,651)
18 exons
identity = 0.970
3'(1.000;1.000;1.000;0.988;1.000;1.000)5'
coverage = 0.997
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000020266
genome : 49,936,189 - 49,995,692 (59,504)
query : 1 - 1,734 (1,734/1,734)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
BC093238
genome : 49,938,642 - 49,982,058 (43,417)
query : 1 - 1,320 (1,320/1,336)
11 exons
identity = 0.995
3'(1.000;1.000;1.000;0.994)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000052781
genome : 49,938,630 - 49,982,058 (43,429)
query : 1 - 1,332 (1,332/1,336)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.997
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
NM_001045073
genome : 49,999,853 - 50,013,875 (14,023)
query : 1 - 2,413 (2,413/2,413)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000023550
genome : 49,999,878 - 50,013,772 (13,895)
query : 1 - 2,285 (2,285/2,285)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
BC134081
genome : 50,006,788 - 50,013,772 (6,985)
query : 1 - 1,149 (1,149/1,164)
6 exons
identity = 0.990
3'(0.976;0.994;0.978;0.989;1.000;1.000)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
BC154423
genome : 50,008,227 - 50,013,772 (5,546)
query : 1 - 778 (778/857)
5 exons
identity = 0.982
3'(0.976;0.970;0.981;1.000;0.975)5'
coverage = 0.999
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
BC075757
genome : 50,014,576 - 50,028,378 (13,803)
query : 1 - 2,469 (2,469/2,499)
11 exons
identity = 0.993
3'(0.990;0.985;0.993;0.986;0.990;0.994;0.993;
0.993;1.000;1.000;1.000)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
AF068773
genome : 50,014,576 - 50,025,209 (10,634)
query : 68 - 2,452 (2,385/2,482)
10 exons
identity = 0.986
3'(0.994;0.982;1.000;0.993;0.990;0.994;1.000;
0.993;0.978;0.918)5'
coverage = 0.973
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
NM_131328
genome : 50,014,576 - 50,025,209 (10,634)
query : 68 - 2,452 (2,385/2,482)
10 exons
identity = 0.986
3'(0.994;0.982;1.000;0.993;0.990;0.994;1.000;
0.993;0.978;0.918)5'
coverage = 0.973
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000004756
genome : 50,014,574 - 50,028,378 (13,805)
query : 1 - 2,477 (2,477/2,477)
11 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.984;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
L35586
genome : 50,024,591 - 50,025,105 (515)
query : 1 - 305 (305/305)
2 exons
identity = 0.957
3'(0.961;0.941)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Zv7_scaffold1997
49960001-50040000 W +