bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
D.rerio
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSDART00000058839
genome : 29,429,704 - 29,430,031 (328)
query : 1 - 328 (328/345)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.951
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001340732
Representative transcript
genome : 29,429,710 - 29,430,291 (582)
query : 1 - 469 (469/469)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
BC095191
Representative transcript
genome : 29,434,586 - 29,440,629 (6,044)
query : 1 - 1,047 (1,047/1,190)
10 exons
identity = 0.986
3'(0.955;1.000;1.000;0.982;0.982;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000027160
Pan
sp. (Chimpanzee) : XM_514184
Pongo
sp. (Orangutan) : ENSPPYT00000000256
Macaca
sp. (Macaque) : XM_001106148
Mus
sp. (Mouse) : BC061248
Rattus
sp. (Rat) : XM_001066750
Canis
sp. (Dog) : XM_547404
Equus
sp. (Horse) : ENSECAT00000008623
Bos
sp. (Cow) : BC126724
Monodelphis
sp. (Opossum) : ENSMODT00000003830
Gallus
sp. (Chicken) : CR353330
Danio
sp. (Zebrafish) : BC085602
Oryzias
sp. (Medaka) : ENSORLT00000011052
Tetraodon
sp. (Tetraodon) : CR678242
Takifugu
sp. (Fugu) : SINFRUT00000143817
NM_001020569
genome : 29,434,586 - 29,440,629 (6,044)
query : 1 - 1,047 (1,047/1,190)
10 exons
identity = 0.986
3'(0.955;1.000;1.000;0.982;0.982;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000064692
genome : 29,434,722 - 29,440,519 (5,798)
query : 1 - 801 (801/801)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
BC115062
Representative transcript
genome : 29,440,714 - 29,447,179 (6,466)
query : 1 - 1,072 (1,072/1,089)
6 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000032978
genome : 29,440,714 - 29,447,196 (6,483)
query : 1 - 1,089 (1,089/1,089)
6 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
NM_001025521
genome : 29,440,714 - 29,447,179 (6,466)
query : 1 - 1,072 (1,072/1,089)
6 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Zv7_scaffold1982
29429607-29445606 W +
HE1_DR1
DNA21TA1_DR
Dr000788
Dr000087
Dr000087
AT_rich
Dr000219
(CA)n
Dr000219
Dr000219
Dr000312
Dr000313
TDR24
Dr000337
Dr000337
AT_rich
(CATA)n
TC1DR3
TC1DR3
TDR14
Dr000284
ANGEL
(TCTG)n
(CATATA)n
TDR18
Dr000167
Dr000054
HATN12_DR
Dr000816
HATN12_DR
HATN12_DR