bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
E.caballus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_001917698
Representative transcript
genome : 59,427,795 - 59,785,452 (357,658)
query : 1 - 10,452 (10,452/10,452)
68 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000077028
Pan
sp. (Chimpanzee) : XM_507839
Pongo
sp. (Orangutan) : ENSPPYT00000002834
Macaca
sp. (Macaque) : XR_013331
Mus
sp. (Mouse) : AJ888001
Rattus
sp. (Rat) : AB053447
Canis
sp. (Dog) : ENSCAFT00000022666
Bos
sp. (Cow) : ENSBTAT00000028652
Monodelphis
sp. (Opossum) : XM_001365007
Gallus
sp. (Chicken) : XM_421595
Danio
sp. (Zebrafish) : ENSDART00000016602
Oryzias
sp. (Medaka) : ENSORLT00000016841
Takifugu
sp. (Fugu) : SINFRUT00000146814
ENSECAT00000026164
genome : 59,492,523 - 59,785,104 (292,582)
query : 1 - 9,936 (9,936/9,936)
65 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSECAT00000026167
genome : 59,492,523 - 59,785,104 (292,582)
query : 1 - 9,921 (9,921/9,921)
65 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSECAT00000026182
genome : 59,492,523 - 59,785,104 (292,582)
query : 1 - 9,915 (9,915/9,915)
65 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSECAT00000026185
genome : 59,492,523 - 59,785,104 (292,582)
query : 1 - 9,810 (9,810/9,810)
64 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001503764
Representative transcript
genome : 59,786,964 - 59,816,285 (29,322)
query : 1 - 1,899 (1,899/1,899)
14 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.924;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000191128
Pan
sp. (Chimpanzee) : XM_507840
Pongo
sp. (Orangutan) : CR861454
Macaca
sp. (Macaque) : AB171003
Mus
sp. (Mouse) : AK167902
Rattus
sp. (Rat) : BC061759
Canis
sp. (Dog) : XM_856497
Bos
sp. (Cow) : BC105409
Monodelphis
sp. (Opossum) : XM_001365272
Gallus
sp. (Chicken) : AF108656
Danio
sp. (Zebrafish) : AF108655
Oryzias
sp. (Medaka) : ENSORLT00000014344
Tetraodon
sp. (Tetraodon) : CR686651
Takifugu
sp. (Fugu) : SINFRUT00000178536
ENSECAT00000023432
genome : 59,787,228 - 59,802,673 (15,446)
query : 1 - 1,559 (1,559/1,559)
13 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.924;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
contig_8164
59781624-59791045 W +
100
59791046-59791145 N
contig_8165
59791146-59821623 W +