bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
E.caballus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_001491325
Representative transcript
genome : 7,225,388 - 7,326,687 (101,300)
query : 1 - 3,487 (3,487/3,487)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000098082
Pan
sp. (Chimpanzee) : XM_525073
Pongo
sp. (Orangutan) : ENSPPYT00000000177
Macaca
sp. (Macaque) : AB168419
Mus
sp. (Mouse) : AK089989
Rattus
sp. (Rat) : XM_001067807
Canis
sp. (Dog) : XM_849606
Bos
sp. (Cow) : XR_028331
Monodelphis
sp. (Opossum) : XM_001376905
Gallus
sp. (Chicken) : AJ719426
Danio
sp. (Zebrafish) : BC124703
Danio
sp. (Zebrafish) : XM_001332951
Oryzias
sp. (Medaka) : ENSORLT00000017238
Tetraodon
sp. (Tetraodon) : GSTENT00030381001
Takifugu
sp. (Fugu) : SINFRUT00000144725
ENSECAT00000015312
genome : 7,238,873 - 7,326,263 (87,391)
query : 1 - 2,563 (2,563/2,563)
14 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSECAT00000024677
genome : 7,330,654 - 7,332,430 (1,777)
query : 1 - 539 (539/539)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001491266
Representative transcript
genome : 7,330,707 - 7,333,335 (2,629)
query : 1 - 1,194 (1,194/1,194)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000340103
Pan
sp. (Chimpanzee) : XM_001140733
Pongo
sp. (Orangutan) : ENSPPYT00000000178
Macaca
sp. (Macaque) : XM_001091234
Mus
sp. (Mouse) : AF154573
Rattus
sp. (Rat) : XM_001061956
Bos
sp. (Cow) : ENSBTAT00000047295
Monodelphis
sp. (Opossum) : XM_001376893
Oryzias
sp. (Medaka) : ENSORLT00000021759
Tetraodon
sp. (Tetraodon) : GSTENT00013398001
contig_39591
7324021-7332694 W +
100
7332695-7332794 N
contig_39592
7332795-7340020 W +
ERE2
AT_rich
MER2B
MARNA
MARNA
L2b
ERE2
L2b
MARNA
MIRb
MamRep4096
L4
MIR
GC_rich
GC_rich
(CCCCCA)n
L2c
L2b
MIRb
ERE1
L1MD3
MER3
MER3
(TTTTC)n
ERE2
ERE2
ERE1
L1MC5