bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
G.gallus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
AJ719426
Representative transcript
genome : 18,177,622 - 18,205,559 (27,938)
query : 83 - 3,171 (3,089/3,177)
15 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.992;1.000;1.000;
0.996)3'
coverage = 0.972
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000098082
Pan
sp. (Chimpanzee) : XM_525073
Pongo
sp. (Orangutan) : ENSPPYT00000000177
Macaca
sp. (Macaque) : AB168419
Mus
sp. (Mouse) : AK089989
Rattus
sp. (Rat) : XM_001067807
Canis
sp. (Dog) : XM_849606
Equus
sp. (Horse) : XM_001491325
Bos
sp. (Cow) : XR_028331
Monodelphis
sp. (Opossum) : XM_001376905
Danio
sp. (Zebrafish) : BC124703
Danio
sp. (Zebrafish) : XM_001332951
Oryzias
sp. (Medaka) : ENSORLT00000017238
Tetraodon
sp. (Tetraodon) : GSTENT00030381001
Takifugu
sp. (Fugu) : SINFRUT00000144725
NM_001031042
genome : 18,177,622 - 18,205,559 (27,938)
query : 83 - 3,171 (3,089/3,177)
15 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.992;1.000;1.000;
0.996)3'
coverage = 0.972
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSGALT00000015028
genome : 18,177,622 - 18,205,546 (27,925)
query : 1 - 3,079 (3,079/3,079)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
CR391522
genome : 18,177,689 - 18,187,365 (9,677)
query : 56 - 650 (595/651)
6 exons
identity = 0.997
5'(0.993;0.970;1.000;1.000;1.000;1.000)3'
coverage = 0.914
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR523447
genome : 18,202,921 - 18,205,554 (2,634)
query : 2 - 1,408 (1,407/1,410)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.998
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001233537
Representative transcript
genome : 18,205,683 - 18,206,567 (885)
query : 1 - 708 (708/708)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSGALT00000031957
genome : 18,205,743 - 18,206,406 (664)
query : 1 - 572 (572/572)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSGALT00000038807
Representative transcript
genome : 18,207,576 - 18,208,322 (747)
query : 1 - 351 (351/351)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSGALT00000038808
genome : 18,207,576 - 18,208,322 (747)
query : 1 - 354 (354/354)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSGALT00000038806
genome : 18,208,048 - 18,208,487 (440)
query : 1 - 366 (366/366)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Contig9.630
18171590-18207725 W -
321
18207726-18208046 N
Contig9.629
18208047-18211589 W -