bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0000834
HIT000266200
(
BC088366
)
Representative transcript
(Small RNA 2'-O-methyltransferase.)
genome : 109,190,926 - 109,203,664 (12,739)
query : 1 - 1,602 (1,602/1,671)
8 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026610 : 3'-RNA ribose 2'-O-methyltransferase, Hen1
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
GO :
0001510 : Biological Process : RNA methylation
0008171 : Molecular Function : O-methyltransferase activity
0008173 : Molecular Function : RNA methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000834)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179150
Mus
sp. (Mouse) : AK085587
Danio
sp. (Zebrafish) : BC092772
Oryzias
sp. (Medaka) : ENSORLT00000014263
Pongo
sp. (Orangutan) : ENSPPYT00000001309
Pan
sp. (Chimpanzee) : ENSPTRT00000001943
Takifugu
sp. (Fugu) : SINFRUT00000157426
Monodelphis
sp. (Opossum) : XM_001381884
Equus
sp. (Horse) : XM_001492873
Gallus
sp. (Chicken) : XM_426611
Canis
sp. (Dog) : XM_537046
Bos
sp. (Cow) : XM_593944
HIX0000834
HIT000212822 (
NM_144584
)
(Small RNA 2'-O-methyltransferase.)
genome : 109,190,911 - 109,204,148 (13,238)
query : 1 - 1,880 (1,880/1,890)
8 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000834)
HIX0000834
HIT000485644 (
NM_001102592
)
(Small RNA 2'-O-methyltransferase.)
genome : 109,190,911 - 109,203,744 (12,834)
query : 1 - 1,697 (1,697/1,707)
8 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000834)
HIX0000834
HIT000035731
(
BC012198
)
(Small RNA 2'-O-methyltransferase.)
genome : 109,190,926 - 109,203,874 (12,949)
query : 1 - 1,591 (1,591/1,610)
8 exons
identity = 0.999
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026610 : 3'-RNA ribose 2'-O-methyltransferase, Hen1
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
GO :
0001510 : Biological Process : RNA methylation
0008171 : Molecular Function : O-methyltransferase activity
0008173 : Molecular Function : RNA methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000834)
HIX0000834
HIT000504325 (
ENST00000402983
)
(Small RNA 2'-O-methyltransferase.)
genome : 109,190,912 - 109,203,744 (12,833)
query : 1 - 1,696 (1,696/1,696)
8 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000834)
HIX0000834
HIT000351312 (
ENST00000370032
)
(Small RNA 2'-O-methyltransferase.)
genome : 109,190,917 - 109,204,148 (13,232)
query : 1 - 1,874 (1,874/1,874)
8 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000834)
HIX0000834
HIT000351311 (
ENST00000370031
)
(Small RNA 2'-O-methyltransferase.)
genome : 109,190,917 - 109,203,677 (12,761)
query : 1 - 1,717 (1,717/1,717)
9 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000834)
HIX0000834
HIT000011701
(
AK055087
)
(Small RNA 2'-O-methyltransferase.)
genome : 109,190,924 - 109,204,148 (13,225)
query : 1 - 1,867 (1,867/1,867)
8 exons
identity = 0.999
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026610 : 3'-RNA ribose 2'-O-methyltransferase, Hen1
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
GO :
0001510 : Biological Process : RNA methylation
0008171 : Molecular Function : O-methyltransferase activity
0008173 : Molecular Function : RNA methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 16, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000834)
HIX0000834
HIT000517989 (
ENST00000420055
)
(Small RNA 2'-O-methyltransferase.)
genome : 109,191,422 - 109,203,802 (12,381)
query : 1 - 1,244 (1,244/1,244)
8 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15.5, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000834)
HIX0000834
HIT000597105 (
ENST00000493676
)
(Small RNA 2'-O-methyltransferase.)
genome : 109,191,516 - 109,203,686 (12,171)
query : 1 - 822 (822/822)
6 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15.5, nucl 7.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000834)
HIX0000834
HIT000429018
(
AK310152
)
(Small RNA 2'-O-methyltransferase.)
genome : 109,191,961 - 109,204,138 (12,178)
query : 1 - 1,344 (1,344/1,359)
9 exons
identity = 0.996
3'(1.000;1.000;1.000)5'
coverage = 0.989
InterPro :
IPR026610 : 3'-RNA ribose 2'-O-methyltransferase, Hen1
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
GO :
0001510 : Biological Process : RNA methylation
0008171 : Molecular Function : O-methyltransferase activity
0008173 : Molecular Function : RNA methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 15.5, cyto 11, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000834)
HIX0000834
HIT000430408
(
AK311542
)
(Small RNA 2'-O-methyltransferase.)
genome : 109,197,753 - 109,204,048 (6,296)
query : 1 - 940 (940/940)
3 exons
identity = 0.997
3'(0.992;0.996)5'
coverage = 1.000
InterPro :
IPR026610 : 3'-RNA ribose 2'-O-methyltransferase, Hen1
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
GO :
0001510 : Biological Process : RNA methylation
0008171 : Molecular Function : O-methyltransferase activity
0008173 : Molecular Function : RNA methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 11, cyto 10, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000834)
HIX0203681
HIT000464705_08
(
DQ598174
)
Representative transcript
(Non-protein coding transcript.)
genome : 109,217,891 - 109,217,920 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203681)
HIX0203654
HIT000461447_33
(
DQ594916
)
Representative transcript
(Non-protein coding transcript.)
genome : 109,218,902 - 109,218,933 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203654)
HIX0029376
HIT000259254
(
BC053353
)
Representative transcript
(Conserved hypothetical protein.)
genome : 109,233,374 - 109,235,146 (1,773)
query : 1 - 1,773 (1,773/1,830)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 14.5, cyto 10.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029376)
HIX0020919
HIT000206899 (
NM_018061
)
(Pre-mRNA-splicing factor 38B; Sarcoma antigen NY-SAR-27;)
genome : 109,234,932 - 109,244,421 (9,490)
query : 1 - 3,702 (3,702/3,711)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 18.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
HIX0020919
HIT000659754 (
NR_037185
)
(Pre-mRNA-splicing factor 38B; Sarcoma antigen NY-SAR-27;)
genome : 109,234,935 - 109,244,421 (9,487)
query : 1 - 3,752 (3,752/3,761)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, extr 8, nucl 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
HIX0020919
HIT000351305 (
ENST00000370025
)
(Pre-mRNA-splicing factor 38B; Sarcoma antigen NY-SAR-27;)
genome : 109,234,945 - 109,244,425 (9,481)
query : 1 - 3,693 (3,693/3,693)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 18.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
HIX0020919
HIT000096009
(
BC040127
)
(Pre-mRNA-splicing factor 38B.)
genome : 109,234,945 - 109,241,896 (6,952)
query : 1 - 1,164 (1,164/1,178)
6 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;0.965)3'
coverage = 1.000
InterPro :
IPR005037 : Pre-mRNA-splicing factor 38
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
HIX0020919
HIT000053985
(
BC053838
)
(Pre-mRNA-splicing factor 38B;)
genome : 109,234,946 - 109,240,113 (5,168)
query : 1 - 1,578 (1,578/1,595)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005037 : Pre-mRNA-splicing factor 38
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
HIX0020919
HIT000351302 (
ENST00000370022
)
(Pre-mRNA-splicing factor 38B;)
genome : 109,234,946 - 109,240,113 (5,168)
query : 1 - 1,578 (1,578/1,591)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
HIX0020919
HIT000093484
(
BC034581
)
(Pre-mRNA-splicing factor 38B.)
genome : 109,234,949 - 109,240,111 (5,163)
query : 1 - 2,027 (2,027/2,043)
5 exons
identity = 0.998
5'(0.998;0.981;1.000;1.000;0.998)3'
coverage = 0.999
InterPro :
IPR005037 : Pre-mRNA-splicing factor 38
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, extr 8, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
HIX0020919
HIT000571918 (
ENST00000467302
)
(Pre-mRNA-splicing factor 38B.)
genome : 109,234,949 - 109,240,113 (5,165)
query : 1 - 2,030 (2,030/2,043)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, extr 8, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
HIX0020919
HIT000086909
(
BC007757
)
(Pre-mRNA-splicing factor 38B.)
genome : 109,234,958 - 109,242,379 (7,422)
query : 1 - 1,634 (1,634/1,651)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005037 : Pre-mRNA-splicing factor 38
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 19, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
HIX0020919
HIT000090919
(
BC024275
)
(Pre-mRNA-splicing factor 38B.)
genome : 109,234,958 - 109,242,379 (7,422)
query : 1 - 1,634 (1,634/1,651)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005037 : Pre-mRNA-splicing factor 38
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 19, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
HIX0020919
HIT000087284
(
BC009453
)
(Pre-mRNA-splicing factor 38B.)
genome : 109,234,962 - 109,242,379 (7,418)
query : 1 - 1,630 (1,630/1,676)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005037 : Pre-mRNA-splicing factor 38
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 18.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
HIX0020919
HIT000088940
(
BC016296
)
(Pre-mRNA-splicing factor 38B.)
genome : 109,234,962 - 109,242,379 (7,418)
query : 1 - 1,630 (1,630/1,676)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005037 : Pre-mRNA-splicing factor 38
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 18.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
HIX0020919
HIT000028823
(
AL833950
)
(Pre-mRNA-splicing factor 38B; Sarcoma antigen NY-SAR-27;)
genome : 109,234,963 - 109,244,421 (9,459)
query : 1 - 3,724 (3,724/3,733)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005037 : Pre-mRNA-splicing factor 38
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, extr 8, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
HIX0020919
HIT000351301 (
ENST00000370021
)
(Pre-mRNA-splicing factor 38B; Sarcoma antigen NY-SAR-27;)
genome : 109,234,963 - 109,244,425 (9,463)
query : 1 - 3,728 (3,728/3,728)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, extr 8, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
HIX0020919
HIT000003666
(
AK001192
)
(Pre-mRNA-splicing factor 38B; Sarcoma antigen NY-SAR-27;)
genome : 109,235,138 - 109,244,163 (9,026)
query : 1 - 3,239 (3,239/3,239)
6 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 19, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
HIX0020919
HIT000390136
(
BC130346
)
Representative transcript
(Pre-mRNA-splicing factor 38B; Sarcoma antigen NY-SAR-27;)
genome : 109,235,186 - 109,243,974 (8,789)
query : 1 - 3,001 (3,001/3,001)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005037 : Pre-mRNA-splicing factor 38
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 18.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179116
Gallus
sp. (Chicken) : AJ851751
Mus
sp. (Mouse) : AK159267
Danio
sp. (Zebrafish) : BC061448
Rattus
sp. (Rat) : BC079264
Oryzias
sp. (Medaka) : ENSORLT00000019556
Pongo
sp. (Orangutan) : ENSPPYT00000001308
Tetraodon
sp. (Tetraodon) : GSTENT00028478001
Takifugu
sp. (Fugu) : SINFRUT00000130956
Monodelphis
sp. (Opossum) : XM_001372340
Equus
sp. (Horse) : XM_001492903
Canis
sp. (Dog) : XM_849600
HIX0020919
HIT000391014
(
BC132963
)
(Pre-mRNA-splicing factor 38B; Sarcoma antigen NY-SAR-27;)
genome : 109,235,186 - 109,243,974 (8,789)
query : 1 - 3,001 (3,001/3,001)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005037 : Pre-mRNA-splicing factor 38
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 18.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
HIX0020919
HIT000502669
(
BC144243
)
(Pre-mRNA-splicing factor 38B; Sarcoma antigen NY-SAR-27;)
genome : 109,235,186 - 109,243,974 (8,789)
query : 1 - 3,082 (3,082/3,082)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005037 : Pre-mRNA-splicing factor 38
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 6, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
HIX0020919
HIT000338931
(
BC107801
)
(Pre-mRNA-splicing factor 38B.)
genome : 109,235,209 - 109,242,126 (6,918)
query : 5 - 1,134 (1,130/1,160)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR005037 : Pre-mRNA-splicing factor 38
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
HIX0020919
HIT000589599 (
ENST00000485810
)
(Pre-mRNA-splicing factor 38B.)
genome : 109,240,322 - 109,242,007 (1,686)
query : 1 - 1,352 (1,352/1,352)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15.5, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
HIX0020919
HIT000085288
(
AY211915
)
(Pre-mRNA-splicing factor 38B.)
genome : 109,242,204 - 109,242,988 (785)
query : 9 - 783 (775/799)
1 exon
identity = 0.980
5'(0.980)3'
coverage = 0.990
InterPro :
IPR005037 : Pre-mRNA-splicing factor 38
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020919)
HIX0199895
HIT000351297 (
ENST00000370017
)
(Fibronectin type III domain-containing protein 7; Precursor;)
genome : 109,255,279 - 109,285,362 (30,084)
query : 1 - 3,332 (3,332/3,332)
12 exons
identity = 0.998
5'(0.989;0.989;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25.5, extr_plas 14.5, plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199895)
HIX0199895
HIT000561079 (
NM_001144937
)
(Fibronectin type III domain-containing protein 7; Precursor;)
genome : 109,255,556 - 109,285,371 (29,816)
query : 1 - 3,064 (3,064/3,064)
12 exons
identity = 0.998
5'(0.947;0.989;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, E.R. 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199895)
HIX0199895
HIT000110680 (
ENST00000271311
)
(Fibronectin type III domain-containing protein 7; Precursor;)
genome : 109,256,067 - 109,285,365 (29,299)
query : 1 - 3,061 (3,061/3,061)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 5, cyto_nucl 5, cyto 3, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199895)
HIX0199895
HIT000259700
(
BC057762
)
Representative transcript
(Fibronectin type III domain-containing protein 7; Precursor;)
genome : 109,264,988 - 109,285,366 (20,379)
query : 3 - 2,432 (2,430/2,447)
9 exons
identity = 0.999
5'(0.996;0.996;0.996;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
InterPro :
IPR003961 : Fibronectin type III
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199895)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK053989
Oryzias
sp. (Medaka) : ENSORLT00000019571
Pongo
sp. (Orangutan) : ENSPPYT00000001307
Tetraodon
sp. (Tetraodon) : GSTENT00013015001
Tetraodon
sp. (Tetraodon) : GSTENT00028477001
Takifugu
sp. (Fugu) : SINFRUT00000144455
Rattus
sp. (Rat) : XM_001072055
Macaca
sp. (Macaque) : XM_001087496
Monodelphis
sp. (Opossum) : XM_001381885
Equus
sp. (Horse) : XM_001492915
Gallus
sp. (Chicken) : XM_422182
Pan
sp. (Chimpanzee) : XM_513609
Canis
sp. (Dog) : XM_547250
HIX0199895
HIT000018024
(
AK093157
)
(Fibronectin type III domain-containing protein 7; Precursor;)
genome : 109,265,033 - 109,285,365 (20,333)
query : 1 - 2,384 (2,384/2,384)
9 exons
identity = 0.998
5'(1.000;0.992;0.996;1.000;0.996;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003961 : Fibronectin type III
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 13, cyto_nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199895)
HIX0199895
HIT000390211
(
BC130421
)
(Fibronectin type III domain-containing protein 7; Precursor;)
genome : 109,265,033 - 109,284,678 (19,646)
query : 1 - 1,697 (1,697/1,697)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003961 : Fibronectin type III
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199895)
HIX0199895
HIT000502647
(
BC144218
)
(Fibronectin type III domain-containing protein 7; Precursor;)
genome : 109,265,033 - 109,284,678 (19,646)
query : 1 - 1,668 (1,668/1,668)
8 exons
identity = 0.998
5'(1.000;0.996;0.996;1.000;0.996;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR003961 : Fibronectin type III
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 11, mito 3, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199895)
HIX0199895
HIT000543208 (
ENST00000445274
)
(Fibronectin type III domain-containing protein 7; Precursor;)
genome : 109,265,033 - 109,284,678 (19,646)
query : 1 - 1,667 (1,667/1,667)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 12, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199895)
HIX0160958
HIT000535334 (
ENST00000437400
)
(Hypothetical short protein.)
genome : 109,276,878 - 109,277,347 (470)
query : 1 - 386 (386/386)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, extr 9, nucl 9, cyto_nucl 7.33333, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160958)
HIX0200007
HIT000203772 (
NM_007269
)
(Syntaxin-binding protein 3; Platelet Sec1 protein; PSP; Protein unc-18 homolog 3; Unc18-3; Protein unc-18 homolog C; Unc-18C;)
genome : 109,289,285 - 109,352,148 (62,864)
query : 1 - 2,503 (2,503/2,522)
19 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.977;0.958;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, nucl 3.5, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200007)
HIX0200007
HIT000587469 (
ENST00000483586
)
(Syntaxin-binding protein 3.)
genome : 109,289,296 - 109,299,627 (10,332)
query : 1 - 561 (561/561)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8, nucl 4, cyto_plas 4, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200007)
HIX0200007
HIT000422931
(
AK290134
)
(Syntaxin-binding protein 3; Platelet Sec1 protein; PSP; Protein unc-18 homolog 3; Unc18-3; Protein unc-18 homolog C; Unc-18C;)
genome : 109,289,301 - 109,351,615 (62,315)
query : 1 - 1,954 (1,954/1,954)
19 exons
identity = 0.995
5'(0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.977;0.958;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001619 : Sec1-like protein
IPR027482 : Sec1-like, domain 2
GO :
0006904 : Biological Process : vesicle docking involved in exocytosis
0016192 : Biological Process : vesicle-mediated transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, nucl 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200007)
HIX0200007
HIT000063113
(
AF032922
)
(Syntaxin-binding protein 3; Platelet Sec1 protein; PSP; Protein unc-18 homolog 3; Unc18-3; Protein unc-18 homolog C; Unc-18C;)
genome : 109,289,354 - 109,352,148 (62,795)
query : 52 - 2,485 (2,434/2,504)
19 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.977;0.958;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.979
InterPro :
IPR001619 : Sec1-like protein
IPR027482 : Sec1-like, domain 2
GO :
0006904 : Biological Process : vesicle docking involved in exocytosis
0016192 : Biological Process : vesicle-mediated transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, nucl 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200007)
HIX0200007
HIT000573863 (
ENST00000469338
)
(Syntaxin-binding protein 3.)
genome : 109,289,304 - 109,295,823 (6,520)
query : 1 - 294 (294/294)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200007)
HIX0200007
HIT000424119
(
AK291322
)
(Syntaxin-binding protein 3; Platelet Sec1 protein; PSP; Protein unc-18 homolog 3; Unc18-3; Protein unc-18 homolog C; Unc-18C;)
genome : 109,289,308 - 109,352,139 (62,832)
query : 4 - 2,474 (2,471/2,474)
19 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.977;0.948;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.999
InterPro :
IPR001619 : Sec1-like protein
IPR027482 : Sec1-like, domain 2
GO :
0006904 : Biological Process : vesicle docking involved in exocytosis
0016192 : Biological Process : vesicle-mediated transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, nucl 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200007)
HIX0200007
HIT000330950
(
AK223170
)
(Syntaxin-binding protein 3; Platelet Sec1 protein; PSP; Protein unc-18 homolog 3; Unc18-3; Protein unc-18 homolog C; Unc-18C;)
genome : 109,289,308 - 109,352,140 (62,833)
query : 3 - 2,474 (2,472/2,503)
19 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.969;0.958;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.997)3'
coverage = 0.999
InterPro :
IPR001619 : Sec1-like protein
IPR027482 : Sec1-like, domain 2
GO :
0006904 : Biological Process : vesicle docking involved in exocytosis
0016192 : Biological Process : vesicle-mediated transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 15, nucl 3.5, mito 2, pero 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200007)
HIX0200007
HIT000101683
(
D63506
)
(Syntaxin-binding protein 3; Platelet Sec1 protein; PSP; Protein unc-18 homolog 3; Unc18-3; Protein unc-18 homolog C; Unc-18C;)
genome : 109,289,308 - 109,352,148 (62,841)
query : 1 - 2,479 (2,479/2,508)
19 exons
identity = 0.994
5'(0.980;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.977;0.927;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.988
InterPro :
IPR001619 : Sec1-like protein
IPR027482 : Sec1-like, domain 2
GO :
0006904 : Biological Process : vesicle docking involved in exocytosis
0016192 : Biological Process : vesicle-mediated transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 14, nucl 3, mito 2, pero 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200007)
HIX0200007
HIT000431776
(
AK312910
)
(Syntaxin-binding protein 3; Platelet Sec1 protein; PSP; Protein unc-18 homolog 3; Unc18-3; Protein unc-18 homolog C; Unc-18C;)
genome : 109,289,308 - 109,351,499 (62,192)
query : 1 - 1,831 (1,831/1,831)
19 exons
identity = 0.995
5'(0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.977;0.958;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001619 : Sec1-like protein
IPR027482 : Sec1-like, domain 2
GO :
0006904 : Biological Process : vesicle docking involved in exocytosis
0016192 : Biological Process : vesicle-mediated transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, nucl 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200007)
HIX0200007
HIT000053243
(
BC047764
)
Representative transcript
(Syntaxin-binding protein 3; Platelet Sec1 protein; PSP; Protein unc-18 homolog 3; Unc18-3; Protein unc-18 homolog C; Unc-18C;)
genome : 109,289,310 - 109,352,140 (62,831)
query : 1 - 2,470 (2,470/2,484)
19 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.977;0.958;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001619 : Sec1-like protein
IPR027482 : Sec1-like, domain 2
GO :
0006904 : Biological Process : vesicle docking involved in exocytosis
0016192 : Biological Process : vesicle-mediated transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, nucl 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200007)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720755
Mus
sp. (Mouse) : BC062901
Rattus
sp. (Rat) : BC098660
Bos
sp. (Cow) : ENSBTAT00000009642
Oryzias
sp. (Medaka) : ENSORLT00000014422
Pongo
sp. (Orangutan) : ENSPPYT00000001306
Tetraodon
sp. (Tetraodon) : GSTENT00013014001
Takifugu
sp. (Fugu) : SINFRUT00000144450
Macaca
sp. (Macaque) : XM_001087621
Pan
sp. (Chimpanzee) : XM_001145368
Monodelphis
sp. (Opossum) : XM_001381886
Equus
sp. (Horse) : XM_001917387
Danio
sp. (Zebrafish) : XM_001922034
Canis
sp. (Dog) : XM_861415
HIX0200007
HIT000351288 (
ENST00000370008
)
(Syntaxin-binding protein 3; Platelet Sec1 protein; PSP; Protein unc-18 homolog 3; Unc18-3; Protein unc-18 homolog C; Unc-18C;)
genome : 109,289,310 - 109,352,148 (62,839)
query : 1 - 2,478 (2,478/2,478)
19 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.977;0.958;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, nucl 3.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200007)
HIX0200007
HIT000091455
(
BC028028
)
(Hypothetical protein.)
genome : 109,289,311 - 109,290,852 (1,542)
query : 1 - 1,571 (1,571/1,630)
1 exon
identity = 0.981
5'(0.981)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, cyto_mito 10.1667, extr 6, nucl 4,
cyto_pero 3.83333, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200007)
HIX0200007
HIT000051987
(
BC038099
)
(Syntaxin-binding protein 3; Platelet Sec1 protein; PSP; Protein unc-18 homolog 3; Unc18-3; Protein unc-18 homolog C; Unc-18C;)
genome : 109,289,346 - 109,352,140 (62,795)
query : 1 - 2,434 (2,434/2,491)
19 exons
identity = 0.995
5'(0.984;1.000;1.000;1.000;0.987;1.000;0.994;
1.000;0.977;0.958;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001619 : Sec1-like protein
IPR027482 : Sec1-like, domain 2
GO :
0006904 : Biological Process : vesicle docking involved in exocytosis
0016192 : Biological Process : vesicle-mediated transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, nucl 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200007)
HIX0200007
HIT000590347 (
ENST00000486601
)
(Syntaxin-binding protein 3.)
genome : 109,301,679 - 109,319,045 (17,367)
query : 1 - 514 (514/514)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 10.5, extr 7, cyto_nucl 6, E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200007)
HIX0200007
HIT000588988 (
ENST00000485167
)
(Syntaxin-binding protein 3.)
genome : 109,302,675 - 109,324,164 (21,490)
query : 1 - 2,536 (2,536/2,536)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_pero 14, pero 3.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200007)
HIX0161188
HIT000542603 (
ENST00000444669
)
(HAD-like domain containing protein.)
genome : 109,309,463 - 109,310,206 (744)
query : 1 - 744 (744/744)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 11, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161188)
HIX0200007
HIT000598614 (
ENST00000495245
)
(Syntaxin-binding protein 3.)
genome : 109,324,483 - 109,336,253 (11,771)
query : 1 - 765 (765/765)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, mito_nucl 13.5, nucl 5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200007)
HIX0200007
HIT000576493 (
ENST00000472099
)
(Syntaxin-binding protein 3.)
genome : 109,338,857 - 109,350,103 (11,247)
query : 1 - 752 (752/752)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, mito_nucl 14, plas 2, cyto 2, cyto_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200007)
HIX0199905
HIT000027128
(
AL832216
)
Representative transcript
(Protein AKNAD1;)
genome : 109,358,526 - 109,399,716 (41,191)
query : 1 - 3,047 (3,047/3,096)
16 exons
identity = 0.998
3'(1.000;1.000;0.988;1.000;1.000;0.990;1.000;
1.000;1.000;0.994;1.000;1.000;1.000;1.000;
0.998;0.994)5'
coverage = 1.000
InterPro :
IPR022150 : Transcription factor, AT-hook-containing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199905)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB074456
Rattus
sp. (Rat) : BC079051
Canis
sp. (Dog) : ENSCAFT00000031650
Pongo
sp. (Orangutan) : ENSPPYT00000001305
Tetraodon
sp. (Tetraodon) : GSTENT00028477001
Takifugu
sp. (Fugu) : SINFRUT00000160452
Monodelphis
sp. (Opossum) : XM_001381887
Equus
sp. (Horse) : XM_001493547
Bos
sp. (Cow) : XM_864711
Pan
sp. (Chimpanzee) : XR_023673
HIX0199905
HIT000727168 (
NR_049760
)
(Protein AKNAD1;)
genome : 109,358,520 - 109,400,864 (42,345)
query : 1 - 2,912 (2,912/2,912)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 12.5, cyto_golg 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199905)
HIX0199905
HIT000214012 (
NM_152763
)
(Protein AKNAD1;)
genome : 109,358,520 - 109,399,726 (41,207)
query : 1 - 3,063 (3,063/3,063)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199905)
HIX0199905
HIT000351281 (
ENST00000370001
)
(Protein AKNAD1;)
genome : 109,358,520 - 109,399,716 (41,197)
query : 1 - 3,053 (3,053/3,053)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199905)
HIX0199905
HIT000571066 (
ENST00000466413
)
(Protein AKNAD1;)
genome : 109,358,520 - 109,360,076 (1,557)
query : 1 - 812 (812/812)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, extr 9, mito_pero 8.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199905)
HIX0199905
HIT000578483 (
ENST00000474186
)
(Protein AKNAD1;)
genome : 109,358,523 - 109,400,850 (42,328)
query : 1 - 2,895 (2,895/2,895)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 12.5, cyto_golg 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199905)
HIX0199905
HIT000582032 (
ENST00000477908
)
(Protein AKNAD1;)
genome : 109,358,765 - 109,363,200 (4,436)
query : 1 - 498 (498/498)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, extr 9, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199905)
HIX0199905
HIT000020372
(
AK095517
)
(Protein AKNAD1;)
genome : 109,358,768 - 109,400,850 (42,083)
query : 1 - 2,650 (2,650/2,650)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR022150 : Transcription factor, AT-hook-containing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 13.5, cyto_golg 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199905)
HIX0199905
HIT000503336
(
BC150642
)
(Protein AKNAD1;)
genome : 109,358,771 - 109,395,320 (36,550)
query : 1 - 2,567 (2,567/2,567)
15 exons
identity = 0.999
3'(1.000;1.000;0.988;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)5'
coverage = 1.000
InterPro :
IPR022150 : Transcription factor, AT-hook-containing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199905)
HIX0199905
HIT000351275 (
ENST00000369995
)
(Protein AKNAD1;)
genome : 109,365,679 - 109,399,706 (34,028)
query : 1 - 2,641 (2,641/2,641)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 14.8333, cyto 9,
cyto_golg 6.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199905)
HIX0199905
HIT000351274 (
ENST00000369994
)
(Protein AKNAD1;)
genome : 109,365,679 - 109,395,339 (29,661)
query : 1 - 2,318 (2,318/2,318)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14.8333, cyto 10,
cyto_golg 7.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199905)
HIX0199905
HIT000566639 (
ENST00000461774
)
(Protein AKNAD1;)
genome : 109,365,682 - 109,399,698 (34,017)
query : 1 - 2,646 (2,646/2,646)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.8333, cyto 9.5,
cyto_golg 7.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199905)
HIX0199905
HIT000041088
(
BC030647
)
(Protein AKNAD1;)
genome : 109,379,346 - 109,399,706 (20,361)
query : 1 - 2,638 (2,638/2,654)
7 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;0.999;0.981)5'
coverage = 1.000
InterPro :
IPR022150 : Transcription factor, AT-hook-containing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15.3333, cyto_golg 10.8333,
nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199905)
HIX0199905
HIT000577144 (
ENST00000472781
)
(Protein AKNAD1;)
genome : 109,379,346 - 109,399,706 (20,361)
query : 1 - 2,638 (2,638/2,638)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15.3333, cyto_golg 10.8333,
nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199905)
HIX0199905
HIT000432638
(
AK313772
)
(Protein AKNAD1;)
genome : 109,391,374 - 109,399,706 (8,333)
query : 1 - 1,504 (1,504/1,507)
5 exons
identity = 0.997
3'(1.000;0.993;1.000;0.998;0.987)5'
coverage = 0.998
InterPro :
IPR022150 : Transcription factor, AT-hook-containing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15.3333, cyto_golg 10.8333,
nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199905)
HIX0029144
HIT000251621
(
AY312144
)
Representative transcript
(Conserved hypothetical protein.)
genome : 109,399,839 - 109,401,145 (1,307)
query : 1 - 534 (534/546)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3.5, cyto_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029144)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000014187
Pongo
sp. (Orangutan) : ENSPPYT00000001304
HIX0029144
HIT000659302 (
NR_034168
)
(Conserved hypothetical protein.)
genome : 109,399,839 - 109,401,145 (1,307)
query : 1 - 534 (534/546)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3.5, cyto_pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029144)
HIX0029144
HIT000351269 (
ENST00000369989
)
(Conserved hypothetical protein.)
genome : 109,399,839 - 109,401,146 (1,308)
query : 1 - 535 (535/535)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3.5, cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029144)
HIX0029144
HIT000727185 (
NR_049777
)
(Conserved hypothetical protein.)
genome : 109,399,839 - 109,400,962 (1,124)
query : 1 - 468 (468/476)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.983
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3.5, cyto_pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029144)
HIX0029144
HIT000515175 (
ENST00000417241
)
(Conserved hypothetical protein.)
genome : 109,399,866 - 109,400,962 (1,097)
query : 1 - 441 (441/441)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3.5, cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029144)
HIX0000840
HIT000505601 (
ENST00000406462
)
(G-protein-signaling modulator 2; Mosaic protein LGN;)
genome : 109,417,972 - 109,473,044 (55,073)
query : 1 - 3,310 (3,310/3,310)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 14.5, cyto 12.5, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000840)
HIX0000840
HIT000487369
(
AB445462
)
Representative transcript
(G-protein-signaling modulator 2; Mosaic protein LGN;)
genome : 109,419,603 - 109,476,957 (57,355)
query : 1 - 5,611 (5,611/5,611)
16 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)3'
coverage = 1.000
InterPro :
IPR001440 : Tetratricopeptide TPR1
IPR003109 : GoLoco motif
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
0030695 : Molecular Function : GTPase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 14.5, cyto 12.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000840)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB172280
Mus
sp. (Mouse) : AK143552
Danio
sp. (Zebrafish) : BC054918
Gallus
sp. (Chicken) : BX936043
Monodelphis
sp. (Opossum) : ENSMODT00000002825
Oryzias
sp. (Medaka) : ENSORLT00000013727
Oryzias
sp. (Medaka) : ENSORLT00000019608
Pongo
sp. (Orangutan) : ENSPPYT00000001303
Tetraodon
sp. (Tetraodon) : GSTENT00028475001
Tetraodon
sp. (Tetraodon) : GSTENT00033548001
Takifugu
sp. (Fugu) : SINFRUT00000174888
Takifugu
sp. (Fugu) : SINFRUT00000178279
Pan
sp. (Chimpanzee) : XM_001146121
Equus
sp. (Horse) : XM_001493568
Rattus
sp. (Rat) : XM_575015
Bos
sp. (Cow) : XM_591374
Canis
sp. (Dog) : XM_861362
HIX0000840
HIT000204277 (
NM_013296
)
(G-protein-signaling modulator 2; Mosaic protein LGN;)
genome : 109,419,603 - 109,473,050 (53,448)
query : 1 - 3,039 (3,039/3,039)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 14.5, cyto 12.5, extr 2, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000840)
HIX0000840
HIT000109187 (
ENST00000264126
)
(G-protein-signaling modulator 2; Mosaic protein LGN;)
genome : 109,419,603 - 109,473,043 (53,441)
query : 1 - 3,032 (3,032/3,032)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 14.5, cyto 12.5, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000840)
HIX0000840
HIT000533921 (
ENST00000435987
)
(G-protein-signaling modulator 2; Mosaic protein LGN;)
genome : 109,419,603 - 109,441,346 (21,744)
query : 1 - 904 (904/904)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000840)
HIX0000840
HIT000433115
(
AK314249
)
(G-protein-signaling modulator 2; Mosaic protein LGN;)
genome : 109,419,607 - 109,472,562 (52,956)
query : 1 - 2,547 (2,547/2,547)
15 exons
identity = 0.999
5'(1.000;0.993;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001440 : Tetratricopeptide TPR1
IPR003109 : GoLoco motif
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
0030695 : Molecular Function : GTPase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 15.5, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000840)
HIX0000840
HIT000490187
(
AK295563
)
(G-protein-signaling modulator 2; Mosaic protein LGN;)
genome : 109,419,784 - 109,472,935 (53,152)
query : 1 - 2,508 (2,508/2,508)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.981;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001440 : Tetratricopeptide TPR1
IPR003109 : GoLoco motif
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
0030695 : Molecular Function : GTPase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, nucl 14.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000840)
HIX0000840
HIT000040311
(
BC027732
)
(G-protein-signaling modulator 2; Mosaic protein LGN;)
genome : 109,419,827 - 109,473,019 (53,193)
query : 1 - 2,785 (2,785/2,806)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR001440 : Tetratricopeptide TPR1
IPR003109 : GoLoco motif
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
0030695 : Molecular Function : GTPase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 14.5, cyto 12.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000840)
HIX0000840
HIT000533409 (
ENST00000435475
)
(G-protein-signaling modulator 2; Mosaic protein LGN;)
genome : 109,419,878 - 109,439,654 (19,777)
query : 1 - 992 (992/992)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 7, nucl 6.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000840)
HIX0000840
HIT000544731 (
ENST00000446797
)
(G-protein-signaling modulator 2; Mosaic protein LGN;)
genome : 109,420,030 - 109,439,585 (19,556)
query : 1 - 571 (571/571)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 6, cyto_nucl 6, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000840)
HIX0000840
HIT000220332
(
U54999
)
(G-protein-signaling modulator 2; Mosaic protein LGN;)
genome : 109,428,001 - 109,472,691 (44,691)
query : 9 - 2,336 (2,328/2,336)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.986;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001440 : Tetratricopeptide TPR1
IPR003109 : GoLoco motif
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
0030695 : Molecular Function : GTPase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 14.5, cyto 12.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000840)
HIX0000840
HIT000084673
(
AY136740
)
(G-protein-signaling modulator 2; Mosaic protein LGN;)
genome : 109,428,166 - 109,472,562 (44,397)
query : 1 - 2,034 (2,034/2,034)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001440 : Tetratricopeptide TPR1
IPR003109 : GoLoco motif
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
0030695 : Molecular Function : GTPase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000840)
HIX0000840
HIT000267636
(
CR456786
)
(G-protein-signaling modulator 2; Mosaic protein LGN;)
genome : 109,428,166 - 109,472,561 (44,396)
query : 1 - 2,033 (2,033/2,034)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001440 : Tetratricopeptide TPR1
IPR003109 : GoLoco motif
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
0030695 : Molecular Function : GTPase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000840)
HIX0000840
HIT000539669 (
ENST00000441735
)
(G-protein-signaling modulator 2; Mosaic protein LGN;)
genome : 109,456,999 - 109,466,983 (9,985)
query : 1 - 731 (731/731)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, mito 6, plas 4, nucl 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000840)
HIX0000838
HIT000205311 (
NM_015127
)
(Chloride channel CLIC-like family protein.)
genome : 109,472,130 - 109,506,121 (33,992)
query : 1 - 4,695 (4,695/4,695)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, E.R. 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000838
HIT000397711 (
NM_001048210
)
(Chloride channel CLIC-like family protein.)
genome : 109,472,130 - 109,506,121 (33,992)
query : 1 - 4,835 (4,835/4,835)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19, E.R. 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000838
HIT000351251 (
ENST00000369971
)
(Chloride channel CLIC-like family protein.)
genome : 109,472,130 - 109,506,111 (33,982)
query : 1 - 4,825 (4,825/4,825)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19, E.R. 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000838
HIT000513265 (
ENST00000415331
)
(Chloride channel CLIC-like family protein.)
genome : 109,472,130 - 109,506,111 (33,982)
query : 1 - 4,685 (4,685/4,685)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, E.R. 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000838
HIT000310886 (
ENST00000356970
)
(Chloride channel CLIC-like family protein.)
genome : 109,472,130 - 109,506,079 (33,950)
query : 1 - 4,803 (4,803/4,803)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19, E.R. 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000838
HIT000725520 (
NM_001278202
)
(Chloride channel CLIC-like family protein.)
genome : 109,472,130 - 109,493,070 (20,941)
query : 1 - 4,343 (4,343/4,343)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17.5, E.R. 11, extr_plas 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000838
HIT000725521 (
NM_001278203
)
(Chloride channel CLIC-like family protein.)
genome : 109,472,130 - 109,493,070 (20,941)
query : 1 - 4,151 (4,151/4,151)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22.5, extr_plas 12.5, E.R. 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000838
HIT000000486
(
AB018304
)
Representative transcript
(Conserved hypothetical protein.)
genome : 109,472,130 - 109,493,060 (20,931)
query : 1 - 4,696 (4,696/4,696)
11 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19, E.R. 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000838
HIT000351248 (
ENST00000369968
)
(Chloride channel CLIC-like family protein.)
genome : 109,472,130 - 109,493,060 (20,931)
query : 1 - 4,141 (4,141/4,141)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22.5, extr_plas 12.5, E.R. 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000838
HIT000351249 (
ENST00000369969
)
(Chloride channel CLIC-like family protein.)
genome : 109,472,130 - 109,493,060 (20,931)
query : 1 - 4,333 (4,333/4,333)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17.5, E.R. 11, extr_plas 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000838
HIT000015430
(
AK090563
)
(Chloride channel CLIC-like protein 1 isoform 2 precursor.)
genome : 109,472,561 - 109,506,072 (33,512)
query : 1 - 2,467 (2,467/2,467)
8 exons
identity = 0.996
3'(0.998;0.933;1.000;0.991;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR009231 : Chloride channel CLIC-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000838
HIT000351256 (
ENST00000369976
)
(Chloride channel CLIC-like family protein.)
genome : 109,472,561 - 109,506,072 (33,512)
query : 1 - 2,468 (2,468/2,468)
8 exons
identity = 0.998
3'(1.000;0.942;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000838
HIT000577405 (
ENST00000473062
)
(Hypothetical short protein.)
genome : 109,472,561 - 109,486,149 (13,589)
query : 1 - 319 (319/319)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000838
HIT000586800 (
ENST00000482889
)
(Chloride channel CLIC-like family protein.)
genome : 109,472,602 - 109,486,504 (13,903)
query : 1 - 752 (752/752)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, E.R. 10, plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000838
HIT000031301
(
BC002939
)
(Chloride channel CLIC-like protein 1 isoform 2 precursor.)
genome : 109,474,608 - 109,506,079 (31,472)
query : 1 - 2,175 (2,175/2,262)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.974
InterPro :
IPR009231 : Chloride channel CLIC-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, E.R. 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000838
HIT000351250 (
ENST00000369970
)
(Chloride channel CLIC-like family protein.)
genome : 109,474,608 - 109,493,070 (18,463)
query : 1 - 2,078 (2,078/2,078)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, E.R. 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000840
HIT000002528
(
AK000053
)
(Conserved hypothetical protein.)
genome : 109,475,149 - 109,476,984 (1,836)
query : 1 - 1,836 (1,836/1,855)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, cyto 11, extr 10, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000840)
HIX0000838
HIT000059651
(
AB052915
)
(Chloride channel CLIC-like family protein.)
genome : 109,477,280 - 109,493,070 (15,791)
query : 1 - 1,679 (1,679/1,679)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009231 : Chloride channel CLIC-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19, E.R. 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000838
HIT000059652
(
AB052916
)
(Chloride channel CLIC-like family protein.)
genome : 109,477,280 - 109,493,070 (15,791)
query : 1 - 1,529 (1,529/1,529)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009231 : Chloride channel CLIC-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, E.R. 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000838
HIT000059653
(
AB052917
)
(Chloride channel CLIC-like family protein.)
genome : 109,477,280 - 109,493,070 (15,791)
query : 1 - 1,316 (1,316/1,316)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR009231 : Chloride channel CLIC-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17.5, E.R. 11, extr_plas 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000838
HIT000059654
(
AB052918
)
(Chloride channel CLIC-like family protein.)
genome : 109,477,280 - 109,493,070 (15,791)
query : 1 - 1,124 (1,124/1,124)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009231 : Chloride channel CLIC-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22.5, extr_plas 12.5, E.R. 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000838
HIT000116177 (
ENST00000302500
)
(Chloride channel CLIC-like family protein.)
genome : 109,477,280 - 109,493,070 (15,791)
query : 1 - 1,316 (1,316/1,316)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17.5, E.R. 11, extr_plas 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0000838
HIT000307596 (
ENST00000348264
)
(Chloride channel CLIC-like family protein.)
genome : 109,477,280 - 109,493,070 (15,791)
query : 1 - 1,124 (1,124/1,124)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22.5, extr_plas 12.5, E.R. 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000838)
HIX0199788
HIT000052174
(
BC039254
)
(WD repeat-containing protein 47 isoform 1.)
genome : 109,512,839 - 109,584,724 (71,886)
query : 3 - 4,145 (4,143/4,181)
14 exons
identity = 0.997
3'(0.999;1.000;1.000;1.000;0.967;1.000;1.000;
1.000;1.000;1.000;0.998;1.000;1.000;0.992)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR006594 : LIS1 homology motif
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 17, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199788)
HIX0199788
HIT000051268
(
BC034964
)
(WD repeat-containing protein 47; Neuronal enriched MAP interacting protein; Nemitin;)
genome : 109,512,836 - 109,584,735 (71,900)
query : 1 - 4,240 (4,240/4,259)
15 exons
identity = 0.998
3'(0.999;1.000;0.985;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.999;1.000;1.000;1.000;
0.992)5'
coverage = 0.999
InterPro :
IPR001680 : WD40 repeat
IPR006594 : LIS1 homology motif
IPR006595 : CTLH, C-terminal LisH motif
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16.5, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199788)
HIX0199788
HIT000205246 (
NM_014969
)
(WD repeat-containing protein 47; Neuronal enriched MAP interacting protein; Nemitin;)
genome : 109,512,839 - 109,584,850 (72,012)
query : 1 - 4,352 (4,352/4,373)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16.5, cyto 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199788)
HIX0199788
HIT000560657 (
NM_001142550
)
(WD repeat-containing protein 47; Neuronal enriched MAP interacting protein; Nemitin;)
genome : 109,512,839 - 109,584,850 (72,012)
query : 1 - 4,373 (4,373/4,394)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16.5, cyto 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199788)
HIX0199788
HIT000560658 (
NM_001142551
)
(WD repeat-containing protein 47; Neuronal enriched MAP interacting protein; Nemitin;)
genome : 109,512,839 - 109,584,850 (72,012)
query : 1 - 4,349 (4,349/4,370)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16.5, cyto 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199788)
HIX0199788
HIT000384911
(
AK225781
)
(WD repeat-containing protein 47 isoform 1.)
genome : 109,512,839 - 109,584,608 (71,770)
query : 2 - 4,133 (4,132/4,154)
15 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR006594 : LIS1 homology motif
IPR006595 : CTLH, C-terminal LisH motif
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16.5, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199788)
HIX0199788
HIT000351245 (
ENST00000369965
)
(WD repeat-containing protein 47; Neuronal enriched MAP interacting protein; Nemitin;)
genome : 109,512,836 - 109,584,735 (71,900)
query : 1 - 4,240 (4,240/4,240)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16.5, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199788)
HIX0199788
HIT000314337 (
ENST00000361054
)
(WD repeat-containing protein 47; Neuronal enriched MAP interacting protein; Nemitin;)
genome : 109,512,836 - 109,584,697 (71,862)
query : 1 - 4,115 (4,115/4,115)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 17, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199788)
HIX0199788
HIT000351242 (
ENST00000369962
)
(WD repeat-containing protein 47; Neuronal enriched MAP interacting protein; Nemitin;)
genome : 109,512,836 - 109,584,697 (71,862)
query : 1 - 4,199 (4,199/4,199)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16.5, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199788)
HIX0199788
HIT000483697_03 (
ENST00000400794
)
(WD repeat-containing protein 47; Neuronal enriched MAP interacting protein; Nemitin;)
genome : 109,512,836 - 109,584,608 (71,773)
query : 1 - 4,134 (4,134/4,134)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16.5, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199788)
HIX0199788
HIT000311490 (
ENST00000357672
)
(WD repeat-containing protein 47; Neuronal enriched MAP interacting protein; Nemitin;)
genome : 109,512,840 - 109,584,850 (72,011)
query : 1 - 4,264 (4,264/4,264)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 17, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199788)
HIX0199788
HIT000000610
(
AB020700
)
Representative transcript
(WD repeat-containing protein 47; Neuronal enriched MAP interacting protein; Nemitin;)
genome : 109,512,840 - 109,584,697 (71,858)
query : 1 - 4,195 (4,195/4,195)
15 exons
identity = 1.000
3'(0.999;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16.5, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199788)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173683
Mus
sp. (Mouse) : BC040337
Oryzias
sp. (Medaka) : ENSORLT00000008618
Oryzias
sp. (Medaka) : ENSORLT00000019622
Pongo
sp. (Orangutan) : ENSPPYT00000001301
Tetraodon
sp. (Tetraodon) : GSTENT00028473001
Takifugu
sp. (Fugu) : SINFRUT00000160446
Takifugu
sp. (Fugu) : SINFRUT00000166078
Bos
sp. (Cow) : XM_001253082
Monodelphis
sp. (Opossum) : XM_001381894
Equus
sp. (Horse) : XM_001493773
Danio
sp. (Zebrafish) : XM_001922584
Gallus
sp. (Chicken) : XM_422187
Pan
sp. (Chimpanzee) : XM_513613
Canis
sp. (Dog) : XM_547247
HIX0199788
HIT000081651
(
AK074616
)
(WD repeat-containing protein 47 isoform 3.)
genome : 109,512,840 - 109,538,295 (25,456)
query : 1 - 2,375 (2,375/2,375)
8 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 9.5, cyto_nucl 9, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199788)
HIX0199788
HIT000489622
(
AK294998
)
(WD repeat-containing protein 47 isoform 3.)
genome : 109,513,748 - 109,556,549 (42,802)
query : 13 - 2,830 (2,818/2,830)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.996
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199788)
HIX0199788
HIT000422586
(
AK289789
)
(WD repeat-containing protein 47; Neuronal enriched MAP interacting protein; Nemitin;)
genome : 109,513,773 - 109,584,724 (70,952)
query : 1 - 3,292 (3,292/3,292)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR006594 : LIS1 homology motif
IPR006595 : CTLH, C-terminal LisH motif
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16.5, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199788)
HIX0161023
HIT000537216 (
ENST00000439282
)
(Conserved hypothetical protein.)
genome : 109,529,585 - 109,529,867 (283)
query : 1 - 283 (283/283)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 4, extr 3, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161023)
HIX0148750
HIT000692179_01 (
ENST00000580261
)
(Ribosomal protein L22/L17 family protein.)
genome : 109,534,876 - 109,535,493 (618)
query : 52 - 669 (618/669)
1 exon
identity = 0.990
5'(0.990)3'
coverage = 0.924
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148750)
HIX0148750
HIT000637307_01 (
ENST00000538262
)
(Ribosomal protein L22/L17 family protein.)
genome : 109,534,878 - 109,535,489 (612)
query : 1 - 612 (612/612)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148750)
HIX0148750
HIT000512004 (
ENST00000414070
)
(Ribosomal protein L22/L17 family protein.)
genome : 109,534,904 - 109,535,458 (555)
query : 1 - 555 (555/555)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148750)
HIX0148750
HIT000601340_02 (
ENST00000498103
)
(Ribosomal protein L22/L17 family protein.)
genome : 109,534,904 - 109,535,458 (555)
query : 1 - 555 (555/555)
1 exon
identity = 0.986
5'(0.986)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15.5, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148750)
HIX0199788
HIT000629914 (
ENST00000530772
)
(WD repeat-containing protein 47 isoform 1.)
genome : 109,554,149 - 109,584,169 (30,021)
query : 1 - 556 (556/556)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199788)
HIX0199788
HIT000628240 (
ENST00000529074
)
(WD repeat-containing protein 47 isoform 1.)
genome : 109,554,168 - 109,584,727 (30,560)
query : 1 - 586 (586/586)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199788)
HIX0199788
HIT000630467 (
ENST00000531337
)
(WD repeat-containing protein 47 isoform 1.)
genome : 109,554,198 - 109,584,724 (30,527)
query : 1 - 469 (469/469)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199788)
HIX0199788
HIT000627919 (
ENST00000528747
)
(WD repeat-containing protein 47 isoform 3.)
genome : 109,556,472 - 109,584,608 (28,137)
query : 1 - 580 (580/580)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 14, nucl 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199788)
HIX0160871
HIT000532363_01 (
ENST00000434429
)
(Ribosomal protein S27e family protein.)
genome : 109,572,689 - 109,572,941 (253)
query : 1 - 253 (253/253)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160871)
HIX0160689
HIT000525665 (
ENST00000427731
)
(Small GTPase superfamily protein.)
genome : 109,589,450 - 109,590,104 (655)
query : 1 - 655 (655/655)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 4.5, cyto 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160689)
HIX0199977
HIT000038150
(
BC017821
)
Representative transcript
(Transcription initiation factor TFIID subunit 13; Transcription initiation factor TFIID 18 kDa subunit; TAF(II)18; TAFII-18; TAFII18;)
genome : 109,605,121 - 109,618,593 (13,473)
query : 1 - 1,062 (1,062/1,093)
5 exons
identity = 0.996
3'(0.997;0.992;1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR003195 : Transcription initiation factor IID, 18kDa subunit
IPR009072 : Histone-fold
GO :
0006366 : Biological Process : transcription from RNA polymerase II promoter
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 8, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199977)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ719754
Mus
sp. (Mouse) : AK076595
Bos
sp. (Cow) : BC118136
Pongo
sp. (Orangutan) : CR859265
Canis
sp. (Dog) : ENSCAFT00000031589
Equus
sp. (Horse) : ENSECAT00000006619
Monodelphis
sp. (Opossum) : ENSMODT00000002738
Oryzias
sp. (Medaka) : ENSORLT00000002245
Rattus
sp. (Rat) : XM_001071074
Macaca
sp. (Macaque) : XM_001088652
Pan
sp. (Chimpanzee) : XM_001146772
HIX0199977
HIT000565999 (
ENST00000461096
)
(Transcription initiation factor TFIID subunit 13; Transcription initiation factor TFIID 18 kDa subunit; TAF(II)18; TAFII-18; TAFII18;)
genome : 109,605,108 - 109,618,593 (13,486)
query : 1 - 1,076 (1,076/1,076)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 8, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199977)
HIX0199977
HIT000130996 (
ENST00000338366
)
(Transcription initiation factor TFIID subunit 13; Transcription initiation factor TFIID 18 kDa subunit; TAF(II)18; TAFII-18; TAFII18;)
genome : 109,606,762 - 109,618,624 (11,863)
query : 1 - 813 (813/813)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 8, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199977)
HIX0199977
HIT000366844 (
NM_005645
)
(Transcription initiation factor TFIID subunit 13; Transcription initiation factor TFIID 18 kDa subunit; TAF(II)18; TAFII-18; TAFII18;)
genome : 109,606,998 - 109,618,624 (11,627)
query : 1 - 577 (577/577)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 8, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199977)
HIX0199977
HIT000388377
(
BC121180
)
(Transcription initiation factor TFIID subunit 13; Transcription initiation factor TFIID 18 kDa subunit; TAF(II)18; TAFII-18; TAFII18;)
genome : 109,607,108 - 109,618,598 (11,491)
query : 1 - 441 (441/441)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003195 : Transcription initiation factor IID, 18kDa subunit
IPR009072 : Histone-fold
GO :
0006366 : Biological Process : transcription from RNA polymerase II promoter
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 8, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199977)
HIX0199977
HIT000388378
(
BC121181
)
(Transcription initiation factor TFIID subunit 13; Transcription initiation factor TFIID 18 kDa subunit; TAF(II)18; TAFII-18; TAFII18;)
genome : 109,607,108 - 109,618,598 (11,491)
query : 1 - 441 (441/441)
4 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003195 : Transcription initiation factor IID, 18kDa subunit
IPR009072 : Histone-fold
GO :
0006366 : Biological Process : transcription from RNA polymerase II promoter
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 8, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199977)
HIX0199977
HIT000324020
(
X84003
)
(Transcription initiation factor TFIID subunit 13; Transcription initiation factor TFIID 18 kDa subunit; TAF(II)18; TAFII-18; TAFII18;)
genome : 109,607,118 - 109,618,580 (11,463)
query : 1 - 413 (413/413)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003195 : Transcription initiation factor IID, 18kDa subunit
IPR009072 : Histone-fold
GO :
0006366 : Biological Process : transcription from RNA polymerase II promoter
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 8, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199977)
HIX0199977
HIT000431024
(
AK312158
)
(Transcription initiation factor TFIID subunit 13; Transcription initiation factor TFIID 18 kDa subunit; TAF(II)18; TAFII-18; TAFII18;)
genome : 109,607,145 - 109,618,620 (11,476)
query : 1 - 426 (426/426)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003195 : Transcription initiation factor IID, 18kDa subunit
IPR009072 : Histone-fold
GO :
0006366 : Biological Process : transcription from RNA polymerase II promoter
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 8, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199977)
HIX0029158
HIT000087594
(
BC011043
)
Representative transcript
(Conserved hypothetical protein.)
genome : 109,631,888 - 109,633,480 (1,593)
query : 1 - 1,593 (1,593/1,611)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029158)
HIX0000837
HIT000503580
(
BC171849
)
Representative transcript
(Protein kish-B; Transmembrane protein 167B; Precursor;)
genome : 109,632,425 - 109,639,151 (6,727)
query : 1 - 3,326 (3,326/3,326)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009653 : Protein of unknown function DUF1242
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000837)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173896
Mus
sp. (Mouse) : BC055449
Danio
sp. (Zebrafish) : BC077152
Bos
sp. (Cow) : BC122587
Pongo
sp. (Orangutan) : CR858916
Equus
sp. (Horse) : ENSECAT00000004308
Tetraodon
sp. (Tetraodon) : GSTENT00008559001
Takifugu
sp. (Fugu) : SINFRUT00000161563
Pan
sp. (Chimpanzee) : XM_001146988
Gallus
sp. (Chicken) : XM_001231624
Monodelphis
sp. (Opossum) : XM_001381895
Rattus
sp. (Rat) : XM_575014
HIX0000837
HIT000503130
(
BC146873
)
(Protein kish-B; Transmembrane protein 167B; Precursor;)
genome : 109,632,425 - 109,637,178 (4,754)
query : 1 - 1,352 (1,352/1,352)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009653 : Protein of unknown function DUF1242
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000837)
HIX0000837
HIT000503136
(
BC146879
)
(Protein kish-B; Transmembrane protein 167B; Precursor;)
genome : 109,632,425 - 109,637,178 (4,754)
query : 1 - 1,352 (1,352/1,352)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009653 : Protein of unknown function DUF1242
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000837)
HIX0000837
HIT000130902 (
ENST00000338272
)
(Protein kish-B; Transmembrane protein 167B; Precursor;)
genome : 109,633,357 - 109,639,556 (6,200)
query : 1 - 2,798 (2,798/2,798)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000837)
HIX0000837
HIT000262339_03
(
BC066918
)
(Protein kish-B; Transmembrane protein 167B; Precursor;)
genome : 109,633,374 - 109,639,552 (6,179)
query : 1 - 2,777 (2,777/2,795)
3 exons
identity = 0.999
5'(1.000;1.000;0.998)3'
coverage = 0.999
InterPro :
IPR009653 : Protein of unknown function DUF1242
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000837)
HIX0000837
HIT000082226
(
AK075191
)
(Protein kish-B; Transmembrane protein 167B; Precursor;)
genome : 109,633,381 - 109,639,553 (6,173)
query : 1 - 2,771 (2,771/2,771)
3 exons
identity = 0.999
5'(1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR009653 : Protein of unknown function DUF1242
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000837)
HIX0000837
HIT000002160_03
(
AF164793
)
(Protein kish-B; Transmembrane protein 167B; Precursor;)
genome : 109,633,382 - 109,637,812 (4,431)
query : 1 - 1,041 (1,041/1,041)
3 exons
identity = 0.975
5'(1.000;1.000;0.967)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000837)
HIX0000837
HIT000429058_03
(
AK310192
)
(Hypothetical protein.)
genome : 109,633,384 - 109,638,201 (4,818)
query : 2 - 1,285 (1,284/1,285)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 10, cyto 3.5, cyto_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000837)
HIX0000837
HIT000583238 (
ENST00000479160
)
(Protein kish-B; Transmembrane protein 167B; Precursor;)
genome : 109,633,402 - 109,637,611 (4,210)
query : 1 - 897 (897/897)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000837)
HIX0000837
HIT000033934
(
BC008739
)
(Protein kish-B; Transmembrane protein 167B; Precursor;)
genome : 109,633,403 - 109,639,554 (6,152)
query : 1 - 2,750 (2,750/2,768)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009653 : Protein of unknown function DUF1242
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000837)
HIX0000837
HIT000207747 (
NM_020141
)
(Protein kish-B; Transmembrane protein 167B; Precursor;)
genome : 109,633,403 - 109,639,554 (6,152)
query : 1 - 2,750 (2,750/2,768)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000837)
HIX0000837
HIT000261750
(
BC065186
)
(Protein kish-B; Transmembrane protein 167B; Precursor;)
genome : 109,633,403 - 109,639,554 (6,152)
query : 1 - 2,750 (2,750/2,768)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009653 : Protein of unknown function DUF1242
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000837)
HIX0000837
HIT000424090_03
(
AK291293
)
(Protein kish-B; Transmembrane protein 167B; Precursor;)
genome : 109,633,413 - 109,637,418 (4,006)
query : 1 - 604 (604/604)
3 exons
identity = 0.998
5'(1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR009653 : Protein of unknown function DUF1242
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000837)
HIX0000837
HIT000262450
(
BC067116
)
(Protein kish-B; Transmembrane protein 167B; Precursor;)
genome : 109,633,417 - 109,639,556 (6,140)
query : 2 - 2,738 (2,737/2,762)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009653 : Protein of unknown function DUF1242
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000837)
HIX0000837
HIT000578144 (
ENST00000473828
)
(Protein kish-B; Transmembrane protein 167B; Precursor;)
genome : 109,633,428 - 109,636,398 (2,971)
query : 1 - 964 (964/964)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000837)
HIX0029397
HIT000264640
(
BC071822
)
Representative transcript
(Hypothetical short protein.)
genome : 109,642,815 - 109,643,241 (427)
query : 1 - 427 (427/457)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 9.5, cyto 8.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029397)
HIX0029397
HIT000714488 (
ENST00000602755
)
(Hypothetical short protein.)
genome : 109,642,815 - 109,643,241 (427)
query : 1 - 427 (427/427)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 9.5, cyto 8.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029397)
HIX0029397
HIT000367297 (
NR_003023
)
(Hypothetical short protein.)
genome : 109,642,815 - 109,643,234 (420)
query : 1 - 420 (420/420)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 9.5, cyto 8.5, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029397)
HIX0029397
HIT000556682 (
ENST00000458748
)
(Hypothetical short protein.)
genome : 109,642,815 - 109,643,234 (420)
query : 1 - 420 (420/420)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 9.5, cyto 8.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029397)
HIX0203713
HIT000527686 (
ENST00000429752
)
(K Homology domain, type 1 containing protein.)
genome : 109,646,157 - 109,647,388 (1,232)
query : 1 - 609 (609/609)
2 exons
identity = 0.995
3'(0.986;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 10.5, mito 8, extr 4,
E.R._mito 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203713)
HIX0029767
HIT000486080 (
NM_001122961
)
(Uncharacterized protein C1orf194;)
genome : 109,648,574 - 109,656,479 (7,906)
query : 1 - 730 (730/742)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029767)
HIX0029767
HIT000351229 (
ENST00000369949
)
(Uncharacterized protein C1orf194;)
genome : 109,648,573 - 109,656,479 (7,907)
query : 1 - 731 (731/731)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029767)
HIX0029767
HIT000567241 (
ENST00000462402
)
(Uncharacterized protein C1orf194;)
genome : 109,648,573 - 109,656,466 (7,894)
query : 1 - 485 (485/485)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 10.5, cysk 10, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029767)
HIX0029767
HIT000351228 (
ENST00000369948
)
(Uncharacterized protein C1orf194;)
genome : 109,648,573 - 109,655,377 (6,805)
query : 1 - 663 (663/663)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.5, cyto 19, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029767)
HIX0029767
HIT000351225 (
ENST00000369945
)
(Uncharacterized protein C1orf194;)
genome : 109,648,577 - 109,655,369 (6,793)
query : 1 - 534 (534/534)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 20.1667, cyto 19.5, cyto_plas 12.1667,
nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029767)
HIX0029767
HIT000565008 (
ENST00000460065
)
(Uncharacterized protein C1orf194;)
genome : 109,648,577 - 109,655,369 (6,793)
query : 1 - 418 (418/418)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 14, cyto 12, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029767)
HIX0029767
HIT000389522
(
BC127904
)
(Uncharacterized protein C1orf194;)
genome : 109,648,594 - 109,655,369 (6,776)
query : 1 - 401 (401/401)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 14, cyto 12, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029767)
HIX0029767
HIT000389523
(
BC127905
)
Representative transcript
(Uncharacterized protein C1orf194;)
genome : 109,648,594 - 109,655,369 (6,776)
query : 1 - 401 (401/401)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 14, cyto 12, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029767)
HIX0029767
HIT000435277
(
BC141949
)
(Uncharacterized protein C1orf194;)
genome : 109,648,594 - 109,655,369 (6,776)
query : 1 - 634 (634/634)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR022179 : Protein of unknown function DUF3695
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.5, cyto 19, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029767)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC049763
Bos
sp. (Cow) : BC149684
Canis
sp. (Dog) : ENSCAFT00000036786
Equus
sp. (Horse) : ENSECAT00000003566
Pongo
sp. (Orangutan) : ENSPPYT00000001297
Pan
sp. (Chimpanzee) : ENSPTRT00000001958
Monodelphis
sp. (Opossum) : XM_001381899
Rattus
sp. (Rat) : XM_342321
HIX0029767
HIT000435278
(
BC141950
)
(Uncharacterized protein C1orf194;)
genome : 109,648,594 - 109,655,369 (6,776)
query : 1 - 634 (634/634)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR022179 : Protein of unknown function DUF3695
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.5, cyto 19, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029767)
HIX0029767
HIT000435838
(
BC150515
)
(Uncharacterized protein C1orf194;)
genome : 109,648,595 - 109,655,368 (6,774)
query : 1 - 632 (632/632)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR022179 : Protein of unknown function DUF3695
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.5, cyto 19, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029767)
HIX0029767
pHIT000001829 ( pHIT000001829 )
(Uncharacterized protein C1orf194;)
genome : 109,648,650 - 109,656,525 (7,876)
query : 1 - 486 (486/486)
5 exons
InterPro :
IPR022179 : Protein of unknown function DUF3695
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029767)
CAGE tag :
H08BA14M1001
HIX0029767
HIT000351222 (
ENST00000369942
)
(Uncharacterized protein C1orf194;)
genome : 109,648,673 - 109,656,457 (7,785)
query : 1 - 956 (956/956)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029767)
HIX0000843
HIT000632233 (
ENST00000533147
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,656,301 - 109,704,636 (48,336)
query : 1 - 564 (564/564)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 6, cyto 5.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000630785 (
ENST00000531664
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,656,533 - 109,714,635 (58,103)
query : 1 - 750 (750/750)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 10.5, cyto_nucl 9.16667, cyto 4.5,
cyto_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000633534 (
ENST00000534476
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,656,551 - 109,707,303 (50,753)
query : 1 - 570 (570/570)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 9.5, cyto_nucl 9.16667, cyto 5.5,
cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000317460 (
NM_020775
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,656,585 - 109,749,402 (92,818)
query : 1 - 7,031 (7,031/7,054)
22 exons
identity = 1.000
5'(1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14, cyto 10.5, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000724496 (
NM_001267048
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,656,585 - 109,749,402 (92,818)
query : 1 - 6,770 (6,770/6,793)
20 exons
identity = 1.000
5'(1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13.5, cyto 9.5, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000727181 (
NR_049773
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,656,585 - 109,749,402 (92,818)
query : 1 - 6,941 (6,941/6,964)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16.5, nucl 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000625478 (
ENST00000526264
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,656,585 - 109,707,313 (50,729)
query : 1 - 553 (553/553)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 9.5, cyto_nucl 9.16667, cyto 5.5,
cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000351219 (
ENST00000369939
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,656,623 - 109,745,851 (89,229)
query : 1 - 3,442 (3,442/3,442)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13.5, cyto 10.5, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000252410
(
AY358366
)
Representative transcript
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,656,666 - 109,749,597 (92,932)
query : 1 - 4,004 (4,004/4,004)
23 exons
identity = 0.991
5'(0.932;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.983;
0.996;0.977)3'
coverage = 1.000
InterPro :
IPR009011 : Mannose-6-phosphate receptor binding domain
IPR009030 : Insulin-like growth factor binding protein, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13.5, cyto 10.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169307
Mus
sp. (Mouse) : AK139330
Equus
sp. (Horse) : ENSECAT00000022323
Oryzias
sp. (Medaka) : ENSORLT00000008213
Pongo
sp. (Orangutan) : ENSPPYT00000001296
Tetraodon
sp. (Tetraodon) : GSTENT00028158001
Danio
sp. (Zebrafish) : NM_001045110
Takifugu
sp. (Fugu) : SINFRUT00000154313
Rattus
sp. (Rat) : XM_001070823
Macaca
sp. (Macaque) : XM_001088542
Bos
sp. (Cow) : XM_001252338
Monodelphis
sp. (Opossum) : XM_001381901
Canis
sp. (Dog) : XM_537043
Pan
sp. (Chimpanzee) : XR_023805
HIX0000843
HIT000014257
(
AK057647
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,656,729 - 109,745,853 (89,125)
query : 3 - 2,895 (2,893/2,895)
21 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.996;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR009011 : Mannose-6-phosphate receptor binding domain
IPR009030 : Insulin-like growth factor binding protein, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13, cyto 9.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000555557 (
ENST00000457623
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,656,729 - 109,743,404 (86,676)
query : 1 - 2,782 (2,782/2,782)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13, cyto 9.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000388659
(
BC125208
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,656,777 - 109,745,727 (88,951)
query : 1 - 2,903 (2,903/2,903)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.988;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009011 : Mannose-6-phosphate receptor binding domain
IPR009030 : Insulin-like growth factor binding protein, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13, cyto 9.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000628907 (
ENST00000529753
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,656,777 - 109,745,727 (88,951)
query : 1 - 2,903 (2,903/2,903)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13, cyto 9.5, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000491845
(
AK297221
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,656,791 - 109,745,853 (89,063)
query : 1 - 3,186 (3,186/3,186)
21 exons
identity = 0.999
5'(0.988;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009011 : Mannose-6-phosphate receptor binding domain
IPR009030 : Insulin-like growth factor binding protein, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000492102
(
AK297478
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,656,791 - 109,745,853 (89,063)
query : 1 - 3,084 (3,084/3,084)
21 exons
identity = 0.998
5'(0.994;1.000;0.994;0.985;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;1.000;0.994;0.994;1.000)3'
coverage = 1.000
InterPro :
IPR009011 : Mannose-6-phosphate receptor binding domain
IPR009030 : Insulin-like growth factor binding protein, N-terminal
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13.5, cyto 10.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000627188 (
ENST00000527996
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,656,791 - 109,745,853 (89,063)
query : 1 - 3,186 (3,186/3,186)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16.5, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000498627
(
AK304003
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,656,795 - 109,734,227 (77,433)
query : 1 - 1,480 (1,480/1,480)
10 exons
identity = 0.999
5'(1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 8, cyto_nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000594304 (
ENST00000490758
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,656,795 - 109,734,227 (77,433)
query : 1 - 1,480 (1,480/1,480)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 8, cyto_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000632456 (
ENST00000533374
)
(UPF0577 protein KIAA1324; Precursor;)
genome : 109,704,228 - 109,707,248 (3,021)
query : 1 - 537 (537/537)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 8.5, nucl 7.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000496222
(
AK301598
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,714,585 - 109,745,782 (31,198)
query : 1 - 2,626 (2,626/2,626)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009011 : Mannose-6-phosphate receptor binding domain
IPR009030 : Insulin-like growth factor binding protein, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 16.5, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000727182 (
NR_049774
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,729,171 - 109,749,402 (20,232)
query : 1 - 6,891 (6,891/6,914)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 12.5, cyto 12.5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000042807
(
AK122934
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,729,171 - 109,745,853 (16,683)
query : 1 - 3,342 (3,342/3,342)
15 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR009011 : Mannose-6-phosphate receptor binding domain
IPR009030 : Insulin-like growth factor binding protein, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 12.5, cyto 12.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000351218 (
ENST00000369938
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,729,171 - 109,745,853 (16,683)
query : 1 - 3,342 (3,342/3,342)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 12.5, cyto 12.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000724497 (
NM_001267049
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,730,601 - 109,749,402 (18,802)
query : 1 - 5,967 (5,967/5,990)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 12.5, cyto 12.5, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000351216 (
ENST00000369936
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,730,601 - 109,749,401 (18,801)
query : 1 - 5,966 (5,966/5,966)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 12.5, cyto 12.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000041350
(
BC031648
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,730,601 - 109,745,854 (15,254)
query : 1 - 2,419 (2,419/2,449)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009011 : Mannose-6-phosphate receptor binding domain
IPR009030 : Insulin-like growth factor binding protein, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 12.5, cyto 12.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000010106
(
AK026832
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,730,916 - 109,745,849 (14,934)
query : 14 - 2,112 (2,099/2,129)
14 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;1.000;1.000;0.992;1.000;1.000;0.996)3'
coverage = 0.994
InterPro :
IPR009011 : Mannose-6-phosphate receptor binding domain
IPR009030 : Insulin-like growth factor binding protein, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 17, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000001039
(
AB037745
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,731,740 - 109,749,401 (17,662)
query : 1 - 5,567 (5,567/5,567)
13 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 17.5, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000569098 (
ENST00000464345
)
(UPF0577 protein KIAA1324; Precursor;)
genome : 109,733,994 - 109,735,283 (1,290)
query : 1 - 543 (543/543)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000248380
(
AJ512825
)
(Non-protein coding transcript.)
genome : 109,740,230 - 109,742,707 (2,478)
query : 1 - 176 (176/176)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000248381
(
AJ512826
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,740,230 - 109,742,707 (2,478)
query : 1 - 303 (303/303)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009011 : Mannose-6-phosphate receptor binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 9.16667, nucl 8.5, cyto 6.5,
cyto_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000589837 (
ENST00000486065
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,742,813 - 109,745,746 (2,934)
query : 1 - 375 (375/375)
4 exons
identity = 0.992
5'(1.000;0.980;0.980;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000843
HIT000626699 (
ENST00000527501
)
(UPF0577 protein KIAA1324; Estrogen-induced gene 121 protein; Precursor;)
genome : 109,742,813 - 109,745,745 (2,933)
query : 1 - 492 (492/492)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000843)
HIX0000844
HIT000203108 (
NM_006513
)
(Serine-tRNA ligase, type1 family protein.)
genome : 109,756,515 - 109,780,804 (24,290)
query : 1 - 1,939 (1,939/1,956)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.1.1.11
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000844)
HIX0000844
HIT000659210 (
NR_034072
)
(Serine-tRNA ligase, type1 family protein.)
genome : 109,756,515 - 109,760,112 (3,598)
query : 1 - 3,180 (3,180/3,192)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 12.5, extr 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000844)
HIX0000844
HIT000386602
(
BC111398
)
(Serine--tRNA ligase, cytoplasmic; EC=6.1.1.11; Seryl-tRNA synthetase; SerRS; Seryl-tRNA(Ser/Sec) synthetase;)
genome : 109,756,537 - 109,780,739 (24,203)
query : 2 - 1,844 (1,843/1,895)
11 exons
identity = 0.994
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.924;1.000)3'
coverage = 0.999
EC number :
EC 6.1.1.11
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR002314 : Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
IPR002317 : Serine-tRNA ligase, type1
IPR006195 : Aminoacyl-tRNA synthetase, class II
IPR010978 : tRNA-binding arm
IPR015866 : Serine-tRNA synthetase, type1, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004828 : Molecular Function : serine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006434 : Biological Process : seryl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000844)
HIX0000844
HIT000104577 (
ENST00000234677
)
(Serine-tRNA ligase, type1 family protein.)
genome : 109,756,540 - 109,780,742 (24,203)
query : 1 - 1,852 (1,852/1,852)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000844)
HIX0000844
HIT000324456
(
X91257
)
(Serine--tRNA ligase, cytoplasmic; EC=6.1.1.11; Seryl-tRNA synthetase; SerRS; Seryl-tRNA(Ser/Sec) synthetase;)
genome : 109,756,540 - 109,780,736 (24,197)
query : 1 - 1,846 (1,846/1,846)
11 exons
identity = 0.999
5'(1.000;0.986;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.1.1.11
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR002314 : Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
IPR002317 : Serine-tRNA ligase, type1
IPR006195 : Aminoacyl-tRNA synthetase, class II
IPR010978 : tRNA-binding arm
IPR015866 : Serine-tRNA synthetase, type1, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004828 : Molecular Function : serine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006434 : Biological Process : seryl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000844)
HIX0000844
HIT000330457
(
AK222677
)
(Serine--tRNA ligase, cytoplasmic; EC=6.1.1.11; Seryl-tRNA synthetase; SerRS; Seryl-tRNA(Ser/Sec) synthetase;)
genome : 109,756,554 - 109,780,742 (24,189)
query : 1 - 1,838 (1,838/1,851)
11 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;0.987;1.000;1.000)3'
coverage = 0.999
EC number :
EC 6.1.1.11
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR002314 : Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
IPR002317 : Serine-tRNA ligase, type1
IPR006195 : Aminoacyl-tRNA synthetase, class II
IPR010978 : tRNA-binding arm
IPR015866 : Serine-tRNA synthetase, type1, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004828 : Molecular Function : serine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006434 : Biological Process : seryl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000844)
HIX0000844
HIT000431637
(
AK312771
)
(Serine--tRNA ligase, cytoplasmic; EC=6.1.1.11; Seryl-tRNA synthetase; SerRS; Seryl-tRNA(Ser/Sec) synthetase;)
genome : 109,756,554 - 109,780,510 (23,957)
query : 1 - 1,606 (1,606/1,606)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.1.1.11
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR002314 : Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
IPR002317 : Serine-tRNA ligase, type1
IPR006195 : Aminoacyl-tRNA synthetase, class II
IPR010978 : tRNA-binding arm
IPR015866 : Serine-tRNA synthetase, type1, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004828 : Molecular Function : serine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006434 : Biological Process : seryl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000844)
HIX0000844
HIT000586319 (
ENST00000482384
)
(Serine-tRNA ligase, type1 family protein.)
genome : 109,756,554 - 109,757,775 (1,222)
query : 1 - 804 (804/804)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 12.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000844)
HIX0000844
HIT000034329
(
BC009390
)
(Serine--tRNA ligase, cytoplasmic; EC=6.1.1.11; Seryl-tRNA synthetase; SerRS; Seryl-tRNA(Ser/Sec) synthetase;)
genome : 109,756,568 - 109,780,785 (24,218)
query : 1 - 1,867 (1,867/1,914)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 6.1.1.11
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR002314 : Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
IPR002317 : Serine-tRNA ligase, type1
IPR006195 : Aminoacyl-tRNA synthetase, class II
IPR010978 : tRNA-binding arm
IPR015866 : Serine-tRNA synthetase, type1, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004828 : Molecular Function : serine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006434 : Biological Process : seryl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 10, cyto_pero 10, cyto_plas 10,
cyto_golg 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000844)
HIX0000844
HIT000581687 (
ENST00000477544
)
(Serine-tRNA ligase, type1 family protein.)
genome : 109,756,590 - 109,778,053 (21,464)
query : 1 - 694 (694/694)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, pero 3, extr 2, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000844)
HIX0000844
HIT000351203 (
ENST00000369923
)
(Serine-tRNA ligase, type1 family protein.)
genome : 109,756,604 - 109,780,770 (24,167)
query : 1 - 1,882 (1,882/1,882)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000844)
HIX0000844
HIT000029861
(
BC000716
)
Representative transcript
(Serine--tRNA ligase, cytoplasmic; EC=6.1.1.11; Seryl-tRNA synthetase; SerRS; Seryl-tRNA(Ser/Sec) synthetase;)
genome : 109,756,606 - 109,780,742 (24,137)
query : 1 - 1,786 (1,786/1,837)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 6.1.1.11
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR002314 : Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
IPR002317 : Serine-tRNA ligase, type1
IPR006195 : Aminoacyl-tRNA synthetase, class II
IPR010978 : tRNA-binding arm
IPR015866 : Serine-tRNA synthetase, type1, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004828 : Molecular Function : serine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006434 : Biological Process : seryl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000844)
HIX0000844
HIT000101536
(
D49914
)
(Serine--tRNA ligase, cytoplasmic; EC=6.1.1.11; Seryl-tRNA synthetase; SerRS; Seryl-tRNA(Ser/Sec) synthetase;)
genome : 109,756,614 - 109,780,737 (24,124)
query : 3 - 1,775 (1,773/1,775)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 6.1.1.11
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR002314 : Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
IPR002317 : Serine-tRNA ligase, type1
IPR006195 : Aminoacyl-tRNA synthetase, class II
IPR010978 : tRNA-binding arm
IPR015866 : Serine-tRNA synthetase, type1, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004828 : Molecular Function : serine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006434 : Biological Process : seryl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000844)
HIX0000844
HIT000005613
(
AK022339
)
(Conserved hypothetical protein.)
genome : 109,757,882 - 109,760,111 (2,230)
query : 8 - 2,237 (2,230/2,237)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000844)
HIX0000844
HIT000576117 (
ENST00000471705
)
(Serine-tRNA ligase, type1 family protein.)
genome : 109,773,780 - 109,778,053 (4,274)
query : 1 - 851 (851/851)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.5, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000844)
HIX0000844
HIT000018585
(
AK093718
)
(Serine--tRNA ligase, cytoplasmic; EC=6.1.1.11; Seryl-tRNA synthetase; SerRS; Seryl-tRNA(Ser/Sec) synthetase;)
genome : 109,778,156 - 109,780,778 (2,623)
query : 1 - 2,267 (2,267/2,267)
2 exons
identity = 0.998
5'(0.998;1.000)3'
coverage = 1.000
EC number :
EC 6.1.1.11
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR002317 : Serine-tRNA ligase, type1
GO :
0000166 : Molecular Function : nucleotide binding
0004828 : Molecular Function : serine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006434 : Biological Process : seryl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12, cyto 12, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000844)
HIX0000844
HIT000573147 (
ENST00000468588
)
(Serine-tRNA ligase, type1 family protein.)
genome : 109,778,853 - 109,780,791 (1,939)
query : 1 - 1,582 (1,582/1,582)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9, nucl 8, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000844)
HIX0213759
HIT000016304
(
AK091437
)
Representative transcript
(Epidermal growth factor-like domain containing protein.)
genome : 109,795,795 - 109,807,903 (12,109)
query : 1 - 2,581 (2,581/2,821)
13 exons
identity = 0.995
5'(1.000;0.984;0.996;1.000;1.000;1.000;1.000;
1.000;1.000;0.997;1.000;1.000;1.000)3'
coverage = 0.915
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001791 : Laminin G domain
IPR001881 : EGF-like calcium-binding domain
IPR013032 : EGF-like, conserved site
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213759)
HIX0213759
HIT000427959
(
AK309093
)
(EGF-like, laminin domain containing protein.)
genome : 109,806,839 - 109,810,639 (3,801)
query : 1 - 1,135 (1,135/1,135)
8 exons
identity = 0.998
5'(1.000;0.994;1.000;1.000;1.000;1.000;0.989;
1.000)3'
coverage = 1.000
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001368 : TNFR/NGFR cysteine-rich region
IPR001791 : Laminin G domain
IPR001879 : GPCR, family 2, extracellular hormone receptor domain
IPR002049 : EGF-like, laminin
IPR013032 : EGF-like, conserved site
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0004930 : Molecular Function : G-protein coupled receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, extr 10, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213759)
HIX0213759
HIT000564887 (
ENST00000459940
)
(EGF-like, laminin domain containing protein.)
genome : 109,807,891 - 109,809,061 (1,171)
query : 1 - 562 (562/562)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_mito 8.16667, cyto 8, mito 8, mito_pero 6,
plas 5.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213759)
HIX0213839
HIT000592635 (
ENST00000489018
)
(GPCR, family 2, secretin-like protein.)
genome : 109,812,349 - 109,816,931 (4,583)
query : 1 - 2,958 (2,958/2,958)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20, mito 5, extr 3, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213839)
HIX0213839
HIT000047618
(
AK127745
)
Representative transcript
(Cadherin EGF LAG seven-pass G-type receptor 2; Cadherin family member 10; Epidermal growth factor-like protein 2; EGF-like protein 2; Flamingo homolog 3; Multiple epidermal growth factor-like domains protein 3; Multiple EGF-like domains protein 3; Precursor;)
genome : 109,812,640 - 109,816,931 (4,292)
query : 37 - 2,801 (2,765/2,801)
8 exons
identity = 0.994
5'(0.984;1.000;1.000;1.000;1.000;1.000;0.996;
1.000)3'
coverage = 0.987
InterPro :
IPR000832 : GPCR, family 2, secretin-like
IPR017981 : GPCR, family 2-like
GO :
0004888 : Molecular Function : transmembrane signaling receptor activity
0004930 : Molecular Function : G-protein coupled receptor activity
0007166 : Biological Process : cell surface receptor signaling pathway
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213839)
HIX0213839
HIT000046959
(
AK127086
)
(Cadherin EGF LAG seven-pass G-type receptor 2; Cadherin family member 10; Epidermal growth factor-like protein 2; EGF-like protein 2; Flamingo homolog 3; Multiple epidermal growth factor-like domains protein 3; Multiple EGF-like domains protein 3; Precursor;)
genome : 109,813,446 - 109,818,229 (4,784)
query : 1 - 3,681 (3,681/3,681)
5 exons
identity = 0.999
5'(1.000;0.998;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, extr 11, plas 4, lyso 2, cysk_plas 2,
cyto_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213839)
HIX0213839
HIT000601392 (
ENST00000498157
)
(Conserved hypothetical protein.)
genome : 109,813,446 - 109,818,229 (4,784)
query : 1 - 3,680 (3,680/3,680)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, extr 11, plas 4, lyso 2, cysk_plas 2,
cyto_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213839)
HIX0023545
HIT000243076
(
AF447874
)
(Proline/serine-rich coiled-coil protein 1 isoform a.)
genome : 109,822,189 - 109,825,041 (2,853)
query : 1 - 1,870 (1,870/1,949)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026657 : Proline/serine-rich coiled-coil protein 1/G2 and S phase-expressed protein 1
IPR026658 : Proline/serine-rich coiled-coil protein 1
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0023545
HIT000057786
(
BX649139
)
(Proline/serine-rich coiled-coil protein 1;)
genome : 109,822,178 - 109,825,737 (3,560)
query : 1 - 1,584 (1,584/1,604)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
InterPro :
IPR026657 : Proline/serine-rich coiled-coil protein 1/G2 and S phase-expressed protein 1
IPR026658 : Proline/serine-rich coiled-coil protein 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0023545
HIT000210783 (
NM_032636
)
(Proline/serine-rich coiled-coil protein 1 isoform a.)
genome : 109,822,176 - 109,825,790 (3,615)
query : 1 - 1,740 (1,740/1,754)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 18
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0023545
HIT000316114 (
NM_001005290
)
(Proline/serine-rich coiled-coil protein 1;)
genome : 109,822,176 - 109,825,790 (3,615)
query : 1 - 1,639 (1,639/1,653)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0023545
HIT000366058 (
NM_001032291
)
(Proline/serine-rich coiled-coil protein 1 isoform a.)
genome : 109,822,176 - 109,825,790 (3,615)
query : 1 - 1,745 (1,745/1,759)
8 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.964)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 18
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0023545
HIT000074404
(
AF223000
)
Representative transcript
(Proline/serine-rich coiled-coil protein 1 isoform a.)
genome : 109,822,187 - 109,825,769 (3,583)
query : 1 - 1,708 (1,708/1,723)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR026657 : Proline/serine-rich coiled-coil protein 1/G2 and S phase-expressed protein 1
IPR026658 : Proline/serine-rich coiled-coil protein 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK041835
Rattus
sp. (Rat) : BC105874
Bos
sp. (Cow) : BC114140
Canis
sp. (Dog) : ENSCAFT00000031553
Equus
sp. (Horse) : ENSECAT00000017407
Monodelphis
sp. (Opossum) : ENSMODT00000002578
Pongo
sp. (Orangutan) : ENSPPYT00000001292
Pan
sp. (Chimpanzee) : XM_001149207
HIX0023545
HIT000259634
(
BC056909
)
(Proline/serine-rich coiled-coil protein 1;)
genome : 109,822,189 - 109,825,808 (3,620)
query : 12 - 1,835 (1,824/1,850)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.994
InterPro :
IPR026657 : Proline/serine-rich coiled-coil protein 1/G2 and S phase-expressed protein 1
IPR026658 : Proline/serine-rich coiled-coil protein 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0023545
HIT000351187 (
ENST00000369907
)
(Proline/serine-rich coiled-coil protein 1 isoform a.)
genome : 109,822,178 - 109,825,769 (3,592)
query : 1 - 1,717 (1,717/1,717)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0023545
HIT000507300 (
ENST00000409267
)
(Proline/serine-rich coiled-coil protein 1 isoform a.)
genome : 109,822,178 - 109,825,747 (3,570)
query : 1 - 1,730 (1,730/1,730)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0023545
HIT000351184 (
ENST00000369904
)
(Proline/serine-rich coiled-coil protein 1;)
genome : 109,822,178 - 109,825,737 (3,560)
query : 1 - 1,584 (1,584/1,584)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0023545
HIT000351189 (
ENST00000369909
)
(Proline/serine-rich coiled-coil protein 1 isoform a.)
genome : 109,822,179 - 109,825,790 (3,612)
query : 1 - 1,742 (1,742/1,742)
8 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.964)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0023545
HIT000536468 (
ENST00000438534
)
(Proline/serine-rich coiled-coil protein 1;)
genome : 109,822,179 - 109,825,790 (3,612)
query : 1 - 1,827 (1,827/1,827)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0023545
HIT000046440
(
AK126567
)
(Proline/serine-rich coiled-coil protein 1;)
genome : 109,822,179 - 109,825,726 (3,548)
query : 1 - 1,572 (1,572/1,572)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR026657 : Proline/serine-rich coiled-coil protein 1/G2 and S phase-expressed protein 1
IPR026658 : Proline/serine-rich coiled-coil protein 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0023545
HIT000507172 (
ENST00000409138
)
(Proline/serine-rich coiled-coil protein 1;)
genome : 109,822,189 - 109,825,808 (3,620)
query : 1 - 1,824 (1,824/1,824)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0023545
HIT000595918 (
ENST00000492431
)
(Proline/serine-rich coiled-coil protein 1 isoform a.)
genome : 109,822,189 - 109,825,041 (2,853)
query : 1 - 1,870 (1,870/1,870)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0023545
HIT000351183 (
ENST00000369903
)
(Proline/serine-rich coiled-coil protein 1 isoform a.)
genome : 109,822,207 - 109,825,744 (3,538)
query : 1 - 1,710 (1,710/1,710)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0023545
HIT000422390
(
AK289593
)
(Proline/serine-rich coiled-coil protein 1 isoform a.)
genome : 109,822,346 - 109,825,727 (3,382)
query : 1 - 1,512 (1,512/1,512)
8 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.998;1.000;0.981;
0.917)5'
coverage = 1.000
InterPro :
IPR026657 : Proline/serine-rich coiled-coil protein 1/G2 and S phase-expressed protein 1
IPR026658 : Proline/serine-rich coiled-coil protein 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0023545
HIT000526965 (
ENST00000429031
)
(Proline/serine-rich coiled-coil protein 1 isoform a.)
genome : 109,823,608 - 109,825,744 (2,137)
query : 1 - 835 (835/835)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 15.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0023545
HIT000516848 (
ENST00000418914
)
(Proline/serine-rich coiled-coil protein 1;)
genome : 109,823,729 - 109,825,744 (2,016)
query : 1 - 1,088 (1,088/1,088)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0023545
HIT000578426 (
ENST00000474126
)
(Proline/serine-rich coiled-coil protein 1;)
genome : 109,823,740 - 109,825,658 (1,919)
query : 1 - 1,095 (1,095/1,095)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0023545
HIT000564724 (
ENST00000459765
)
(Proline/serine-rich coiled-coil protein 1 isoform a.)
genome : 109,824,026 - 109,825,767 (1,742)
query : 1 - 839 (839/839)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0023545
HIT000576151 (
ENST00000471740
)
(Proline/serine-rich coiled-coil protein 1 isoform a.)
genome : 109,824,241 - 109,825,766 (1,526)
query : 1 - 738 (738/738)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 15.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023545)
HIX0200002
HIT000339068
(
BC108664
)
(Myosin-binding protein H-like;)
genome : 109,834,990 - 109,849,618 (14,629)
query : 1 - 1,019 (1,019/1,033)
4 exons
identity = 0.998
3'(0.998;0.977;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013098 : Immunoglobulin I-set
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 9.5, cyto 8.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200002)
HIX0200002
HIT000049105
(
AK129834
)
Representative transcript
(Myosin-binding protein H-like;)
genome : 109,834,987 - 109,849,663 (14,677)
query : 1 - 1,372 (1,372/1,372)
9 exons
identity = 0.997
3'(0.996;0.977;1.000;1.000;1.000;0.993;0.995;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11, cysk 5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200002)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK004148
Danio
sp. (Zebrafish) : BC067675
Rattus
sp. (Rat) : BC087113
Tetraodon
sp. (Tetraodon) : CR661356
Danio
sp. (Zebrafish) : ENSDART00000026359
Oryzias
sp. (Medaka) : ENSORLT00000008955
Pongo
sp. (Orangutan) : ENSPPYT00000001291
Gallus
sp. (Chicken) : L05605
Takifugu
sp. (Fugu) : SINFRUT00000136449
Macaca
sp. (Macaque) : XM_001089938
Equus
sp. (Horse) : XM_001493323
Pan
sp. (Chimpanzee) : XM_513620
Bos
sp. (Cow) : XM_583420
Canis
sp. (Dog) : XM_849559
HIX0200002
HIT000311041 (
ENST00000357155
)
(Myosin-binding protein H-like;)
genome : 109,834,987 - 109,849,663 (14,677)
query : 1 - 1,372 (1,372/1,372)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11, cysk 5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200002)
HIX0200002
HIT000316789 (
NM_001010985
)
(Myosin-binding protein H-like;)
genome : 109,834,987 - 109,849,663 (14,677)
query : 1 - 1,372 (1,372/1,372)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11, cysk 5, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200002)
HIX0200002
HIT000724480 (
NM_001265613
)
(Myosin-binding protein H-like;)
genome : 109,834,987 - 109,849,663 (14,677)
query : 1 - 1,303 (1,303/1,303)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 11.5, extr 5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200002)
HIX0200002
HIT000593301 (
ENST00000489706
)
(Myosin-binding protein H-like;)
genome : 109,834,987 - 109,838,975 (3,989)
query : 1 - 451 (451/451)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200002)
HIX0200002
HIT000582085 (
ENST00000477962
)
(Myosin-binding protein H-like;)
genome : 109,835,137 - 109,849,617 (14,481)
query : 1 - 871 (871/871)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 9.5, cyto 8.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200002)
HIX0200002
HIT000390951
(
BC132900
)
(Myosin-binding protein H-like;)
genome : 109,836,828 - 109,849,640 (12,813)
query : 1 - 1,125 (1,125/1,136)
8 exons
identity = 0.997
3'(0.977;0.995;1.000;1.000;0.993;1.000;1.000;
1.000)5'
coverage = 0.990
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11, cysk 5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200002)
HIX0200002
HIT000390953
(
BC132902
)
(Myosin-binding protein H-like;)
genome : 109,836,828 - 109,849,640 (12,813)
query : 1 - 1,125 (1,125/1,136)
8 exons
identity = 0.998
3'(0.977;1.000;1.000;1.000;0.993;1.000;1.000;
1.000)5'
coverage = 0.990
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11, cysk 5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200002)
HIX0200002
HIT000502881
(
BC144471
)
(Myosin-binding protein H-like;)
genome : 109,836,828 - 109,849,640 (12,813)
query : 1 - 1,056 (1,056/1,067)
8 exons
identity = 0.998
3'(0.977;1.000;1.000;1.000;0.993;1.000;1.000;
1.000)5'
coverage = 0.990
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 11.5, extr 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200002)
HIX0199828
HIT000024723
(
AL117561
)
(Conserved hypothetical protein.)
genome : 109,852,192 - 109,854,158 (1,967)
query : 4 - 1,970 (1,967/1,989)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0199828
HIT000259294
(
BC053575
)
(Conserved hypothetical protein.)
genome : 109,852,189 - 109,853,930 (1,742)
query : 1 - 1,741 (1,741/1,755)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0199828
HIT000199830 (
NM_002959
)
(VPS10 domain containing protein.)
genome : 109,852,189 - 109,940,563 (88,375)
query : 1 - 7,021 (7,021/7,034)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, pero 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0199828
HIT000657207 (
NM_001205228
)
(VPS10 domain containing protein.)
genome : 109,852,189 - 109,935,979 (83,791)
query : 1 - 6,994 (6,994/7,007)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, plas 6, mito 5, nucl 4, mito_pero 4, E.R. 2,
golg 2, E.R._golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0199828
HIT000097019
(
BC041982
)
(Conserved hypothetical protein.)
genome : 109,852,200 - 109,854,033 (1,834)
query : 1 - 1,833 (1,833/1,849)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0199828
HIT000106969 (
ENST00000256637
)
(VPS10 domain containing protein.)
genome : 109,852,192 - 109,940,573 (88,382)
query : 1 - 7,028 (7,028/7,028)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0199828
HIT000003232
(
AK000757
)
(Conserved hypothetical protein.)
genome : 109,852,192 - 109,855,016 (2,825)
query : 1 - 2,825 (2,825/2,825)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0199828
HIT000049816
(
AK130545
)
(Conserved hypothetical protein.)
genome : 109,852,192 - 109,853,891 (1,700)
query : 1 - 1,700 (1,700/1,700)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0199828
HIT000049189
(
AK129918
)
(Conserved hypothetical protein.)
genome : 109,852,198 - 109,853,889 (1,692)
query : 1 - 1,692 (1,692/1,692)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0199828
HIT000588971 (
ENST00000485149
)
(Conserved hypothetical protein.)
genome : 109,856,423 - 109,859,549 (3,127)
query : 1 - 442 (442/442)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, cyto_mito 7.5, extr_plas 6.5, plas 6,
extr 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0199828
HIT000425915
(
AK293118
)
(Sortilin; 100 kDa NT receptor; Glycoprotein 95; Gp95; Neurotensin receptor 3; NT3; NTR3; Precursor;)
genome : 109,856,425 - 109,940,525 (84,101)
query : 1 - 2,747 (2,747/2,747)
20 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;0.995;1.000;
0.994;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;0.994;1.000;1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR006581 : VPS10
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0199828
HIT000496172
(
AK301548
)
(Sortilin isoform 2.)
genome : 109,856,527 - 109,935,979 (79,453)
query : 4 - 2,659 (2,656/2,659)
20 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;0.994;1.000;1.000;1.000;0.997)5'
coverage = 0.999
InterPro :
IPR006581 : VPS10
IPR011040 : Sialidases
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, plas 6, mito 5, nucl 4, mito_pero 4, E.R. 2,
golg 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0199828
HIT000637547 (
ENST00000538502
)
(VPS10 domain containing protein.)
genome : 109,856,527 - 109,935,979 (79,453)
query : 1 - 2,656 (2,656/2,656)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, plas 6, mito 5, nucl 4, mito_pero 4, E.R. 2,
golg 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0199828
HIT000050816
(
BC023542
)
Representative transcript
(Sortilin; 100 kDa NT receptor; Glycoprotein 95; Gp95; Neurotensin receptor 3; NT3; NTR3; Precursor;)
genome : 109,856,564 - 109,940,563 (84,000)
query : 1 - 2,646 (2,646/2,679)
20 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;0.994;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006581 : VPS10
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF019109
Mus
sp. (Mouse) : AK147442
Danio
sp. (Zebrafish) : BC068433
Oryzias
sp. (Medaka) : ENSORLT00000020004
Pongo
sp. (Orangutan) : ENSPPYT00000001290
Pan
sp. (Chimpanzee) : ENSPTRT00000001967
Tetraodon
sp. (Tetraodon) : GSTENT00013983001
Tetraodon
sp. (Tetraodon) : GSTENT00028183001
Danio
sp. (Zebrafish) : NM_001126465
Takifugu
sp. (Fugu) : SINFRUT00000128585
Takifugu
sp. (Fugu) : SINFRUT00000131050
Equus
sp. (Horse) : XM_001917352
Canis
sp. (Dog) : XM_537041
Bos
sp. (Cow) : XM_588956
Monodelphis
sp. (Opossum) : XR_030494
HIX0199828
HIT000006922
(
AK023648
)
(Conserved hypothetical protein.)
genome : 109,865,336 - 109,867,127 (1,792)
query : 1 - 1,791 (1,791/1,791)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, cyto 3, nucl 2, mito 2, cyto_golg 2,
mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0199828
HIT000571122 (
ENST00000466471
)
(Conserved hypothetical protein.)
genome : 109,869,428 - 109,878,924 (9,497)
query : 1 - 521 (521/521)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 14.5, nucl 10.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0199828
HIT000429013
(
AK310147
)
(Conserved hypothetical protein.)
genome : 109,888,388 - 109,935,870 (47,483)
query : 1 - 864 (864/864)
8 exons
identity = 0.999
3'(1.000;1.000;0.986;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, plas 5, nucl 4, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0199828
HIT000597165 (
ENST00000493736
)
(Conserved hypothetical protein.)
genome : 109,893,569 - 109,932,521 (38,953)
query : 1 - 583 (583/583)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 18, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0199828
HIT000586181 (
ENST00000482236
)
(Conserved hypothetical protein.)
genome : 109,897,107 - 109,935,979 (38,873)
query : 1 - 615 (615/615)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 16, nucl 9, pero 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0199828
HIT000587394 (
ENST00000483508
)
(Conserved hypothetical protein.)
genome : 109,909,405 - 109,912,211 (2,807)
query : 1 - 759 (759/759)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, mito 6, plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0199828
HIT000599131 (
ENST00000495777
)
(Hypothetical short protein.)
genome : 109,911,100 - 109,912,211 (1,112)
query : 1 - 391 (391/391)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0199828
HIT000576396 (
ENST00000471996
)
(Hypothetical protein.)
genome : 109,912,152 - 109,940,483 (28,332)
query : 1 - 469 (469/469)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199828)
HIX0000848
HIT000656648 (
NM_001199774
)
(Proteasome, subunit alpha/beta family protein.)
genome : 109,941,654 - 109,969,108 (27,455)
query : 1 - 3,745 (3,745/3,758)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.25.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000656647 (
NM_001199773
)
(Proteasome, subunit alpha/beta family protein.)
genome : 109,941,654 - 109,969,081 (27,428)
query : 1 - 3,733 (3,733/3,746)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.25.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000199665 (
NM_002790
)
(Proteasome, subunit alpha/beta family protein.)
genome : 109,941,654 - 109,969,070 (27,417)
query : 1 - 3,825 (3,825/3,838)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.25.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 18, nucl 7.5, extr 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000656646 (
NM_001199772
)
(Proteasome, subunit alpha/beta family protein.)
genome : 109,941,654 - 109,969,070 (27,417)
query : 1 - 3,758 (3,758/3,771)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.4.25.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000110679 (
ENST00000271308
)
(Proteasome, subunit alpha/beta family protein.)
genome : 109,941,653 - 109,968,973 (27,321)
query : 1 - 3,729 (3,729/3,729)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 18, nucl 7.5, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000044180
(
AK124307
)
(Conserved hypothetical protein.)
genome : 109,941,664 - 109,943,691 (2,028)
query : 1 - 2,028 (2,028/2,028)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000499072
(
AK304448
)
(Proteasome subunit alpha type-5 isoform 2.)
genome : 109,944,419 - 109,969,062 (24,644)
query : 1 - 985 (985/985)
8 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.4.25.1
InterPro :
IPR001353 : Proteasome, subunit alpha/beta
IPR023332 : Proteasome A-type subunit
IPR029055 : Nucleophile aminohydrolases, N-terminal
GO :
0004298 : Molecular Function : threonine-type endopeptidase activity
0005839 : Cellular Component : proteasome core complex
0051603 : Biological Process : proteolysis involved in cellular protein catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000637655 (
ENST00000538610
)
(Proteasome, subunit alpha/beta family protein.)
genome : 109,944,419 - 109,969,062 (24,644)
query : 1 - 985 (985/985)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000322497
(
X61970
)
(Proteasome subunit alpha type-5; EC=3.4.25.1; Macropain zeta chain; Multicatalytic endopeptidase complex zeta chain; Proteasome zeta chain;)
genome : 109,944,472 - 109,968,973 (24,502)
query : 1 - 910 (910/959)
9 exons
identity = 0.998
3'(1.000;1.000;0.990;1.000;1.000;1.000;1.000;
0.985;1.000)5'
coverage = 1.000
EC number :
EC 3.4.25.1
InterPro :
IPR000426 : Proteasome alpha-subunit, N-terminal domain
IPR001353 : Proteasome, subunit alpha/beta
IPR023332 : Proteasome A-type subunit
IPR029055 : Nucleophile aminohydrolases, N-terminal
GO :
0004175 : Molecular Function : endopeptidase activity
0004298 : Molecular Function : threonine-type endopeptidase activity
0005839 : Cellular Component : proteasome core complex
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0019773 : Cellular Component : proteasome core complex, alpha-subunit complex
0051603 : Biological Process : proteolysis involved in cellular protein catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 18, nucl 8, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000337343
(
BC103751
)
(Proteasome subunit alpha type-5; EC=3.4.25.1; Macropain zeta chain; Multicatalytic endopeptidase complex zeta chain; Proteasome zeta chain;)
genome : 109,944,477 - 109,969,045 (24,569)
query : 1 - 977 (977/1,005)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.25.1
InterPro :
IPR000426 : Proteasome alpha-subunit, N-terminal domain
IPR001353 : Proteasome, subunit alpha/beta
IPR023332 : Proteasome A-type subunit
IPR029055 : Nucleophile aminohydrolases, N-terminal
GO :
0004175 : Molecular Function : endopeptidase activity
0004298 : Molecular Function : threonine-type endopeptidase activity
0005839 : Cellular Component : proteasome core complex
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0019773 : Cellular Component : proteasome core complex, alpha-subunit complex
0051603 : Biological Process : proteolysis involved in cellular protein catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 18, nucl 7.5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000385120
(
AK225990
)
Representative transcript
(Proteasome subunit alpha type-5 isoform 2.)
genome : 109,944,472 - 109,969,059 (24,588)
query : 1 - 995 (995/1,012)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993)5'
coverage = 1.000
EC number :
EC 3.4.25.1
InterPro :
IPR001353 : Proteasome, subunit alpha/beta
IPR023332 : Proteasome A-type subunit
IPR029055 : Nucleophile aminohydrolases, N-terminal
GO :
0004298 : Molecular Function : threonine-type endopeptidase activity
0005839 : Cellular Component : proteasome core complex
0051603 : Biological Process : proteolysis involved in cellular protein catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000089639
(
BC018605
)
(Proteasome subunit alpha type-5; EC=3.4.25.1; Macropain zeta chain; Multicatalytic endopeptidase complex zeta chain; Proteasome zeta chain;)
genome : 109,944,472 - 109,968,754 (24,283)
query : 1 - 1,667 (1,667/1,682)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.25.1
InterPro :
IPR001353 : Proteasome, subunit alpha/beta
IPR023332 : Proteasome A-type subunit
IPR029055 : Nucleophile aminohydrolases, N-terminal
GO :
0004298 : Molecular Function : threonine-type endopeptidase activity
0005839 : Cellular Component : proteasome core complex
0051603 : Biological Process : proteolysis involved in cellular protein catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000594411 (
ENST00000490870
)
(Proteasome, subunit alpha/beta family protein.)
genome : 109,944,472 - 109,968,754 (24,283)
query : 1 - 1,667 (1,667/1,667)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000337249
(
BC102018
)
(Proteasome subunit alpha type-5; EC=3.4.25.1; Macropain zeta chain; Multicatalytic endopeptidase complex zeta chain; Proteasome zeta chain;)
genome : 109,944,550 - 109,969,022 (24,473)
query : 1 - 881 (881/881)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.985;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.25.1
InterPro :
IPR000426 : Proteasome alpha-subunit, N-terminal domain
IPR001353 : Proteasome, subunit alpha/beta
IPR023332 : Proteasome A-type subunit
IPR029055 : Nucleophile aminohydrolases, N-terminal
GO :
0004175 : Molecular Function : endopeptidase activity
0004298 : Molecular Function : threonine-type endopeptidase activity
0005839 : Cellular Component : proteasome core complex
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0019773 : Cellular Component : proteasome core complex, alpha-subunit complex
0051603 : Biological Process : proteolysis involved in cellular protein catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 18, nucl 7.5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000337250
(
BC102019
)
(Proteasome subunit alpha type-5; EC=3.4.25.1; Macropain zeta chain; Multicatalytic endopeptidase complex zeta chain; Proteasome zeta chain;)
genome : 109,944,550 - 109,969,022 (24,473)
query : 1 - 881 (881/881)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.25.1
InterPro :
IPR000426 : Proteasome alpha-subunit, N-terminal domain
IPR001353 : Proteasome, subunit alpha/beta
IPR023332 : Proteasome A-type subunit
IPR029055 : Nucleophile aminohydrolases, N-terminal
GO :
0004175 : Molecular Function : endopeptidase activity
0004298 : Molecular Function : threonine-type endopeptidase activity
0005839 : Cellular Component : proteasome core complex
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0019773 : Cellular Component : proteasome core complex, alpha-subunit complex
0051603 : Biological Process : proteolysis involved in cellular protein catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 18, nucl 7.5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000337251
(
BC102020
)
(Proteasome subunit alpha type-5; EC=3.4.25.1; Macropain zeta chain; Multicatalytic endopeptidase complex zeta chain; Proteasome zeta chain;)
genome : 109,944,550 - 109,969,022 (24,473)
query : 1 - 881 (881/881)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.25.1
InterPro :
IPR000426 : Proteasome alpha-subunit, N-terminal domain
IPR001353 : Proteasome, subunit alpha/beta
IPR023332 : Proteasome A-type subunit
IPR029055 : Nucleophile aminohydrolases, N-terminal
GO :
0004175 : Molecular Function : endopeptidase activity
0004298 : Molecular Function : threonine-type endopeptidase activity
0005839 : Cellular Component : proteasome core complex
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0019773 : Cellular Component : proteasome core complex, alpha-subunit complex
0051603 : Biological Process : proteolysis involved in cellular protein catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 18, nucl 7.5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000432217
(
AK313351
)
(Proteasome subunit alpha type-5; EC=3.4.25.1; Macropain zeta chain; Multicatalytic endopeptidase complex zeta chain; Proteasome zeta chain;)
genome : 109,944,635 - 109,969,070 (24,436)
query : 1 - 844 (844/844)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.25.1
InterPro :
IPR000426 : Proteasome alpha-subunit, N-terminal domain
IPR001353 : Proteasome, subunit alpha/beta
IPR023332 : Proteasome A-type subunit
IPR029055 : Nucleophile aminohydrolases, N-terminal
GO :
0004175 : Molecular Function : endopeptidase activity
0004298 : Molecular Function : threonine-type endopeptidase activity
0005839 : Cellular Component : proteasome core complex
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0019773 : Cellular Component : proteasome core complex, alpha-subunit complex
0051603 : Biological Process : proteolysis involved in cellular protein catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 18, nucl 7.5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000266623
(
BT019717
)
(Proteasome subunit alpha type-5; EC=3.4.25.1; Macropain zeta chain; Multicatalytic endopeptidase complex zeta chain; Proteasome zeta chain;)
genome : 109,944,636 - 109,968,952 (24,317)
query : 1 - 725 (725/726)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000)5'
coverage = 0.999
EC number :
EC 3.4.25.1
InterPro :
IPR000426 : Proteasome alpha-subunit, N-terminal domain
IPR001353 : Proteasome, subunit alpha/beta
IPR023332 : Proteasome A-type subunit
IPR029055 : Nucleophile aminohydrolases, N-terminal
GO :
0004175 : Molecular Function : endopeptidase activity
0004298 : Molecular Function : threonine-type endopeptidase activity
0005839 : Cellular Component : proteasome core complex
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0019773 : Cellular Component : proteasome core complex, alpha-subunit complex
0051603 : Biological Process : proteolysis involved in cellular protein catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 16.5, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000267697
(
CR456847
)
(Proteasome subunit alpha type-5; EC=3.4.25.1; Macropain zeta chain; Multicatalytic endopeptidase complex zeta chain; Proteasome zeta chain;)
genome : 109,944,635 - 109,968,952 (24,318)
query : 1 - 726 (726/726)
9 exons
identity = 0.999
3'(1.000;1.000;0.990;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.25.1
InterPro :
IPR000426 : Proteasome alpha-subunit, N-terminal domain
IPR001353 : Proteasome, subunit alpha/beta
IPR023332 : Proteasome A-type subunit
IPR029055 : Nucleophile aminohydrolases, N-terminal
GO :
0004175 : Molecular Function : endopeptidase activity
0004298 : Molecular Function : threonine-type endopeptidase activity
0005839 : Cellular Component : proteasome core complex
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0019773 : Cellular Component : proteasome core complex, alpha-subunit complex
0051603 : Biological Process : proteolysis involved in cellular protein catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 18, nucl 7.5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000582021 (
ENST00000477897
)
(Proteasome, subunit alpha/beta family protein.)
genome : 109,954,492 - 109,954,907 (416)
query : 1 - 275 (275/275)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12, nucl 9.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000588406 (
ENST00000484563
)
(Proteasome, subunit alpha/beta family protein.)
genome : 109,954,575 - 109,969,049 (14,475)
query : 1 - 1,503 (1,503/1,503)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 14.5, nucl 11.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000594814 (
ENST00000491287
)
(Proteasome, subunit alpha/beta family protein.)
genome : 109,957,431 - 109,957,987 (557)
query : 1 - 225 (225/225)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, E.R._mito 6.33333, E.R. 5, plas 4, extr 4,
nucl 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0000848
HIT000028061
(
AL833149
)
(Conserved hypothetical protein.)
genome : 109,965,122 - 109,968,162 (3,041)
query : 1 - 2,100 (2,100/2,130)
2 exons
identity = 0.989
3'(0.990;0.978)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 6, extr 4, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000848)
HIX0213954
HIT000422310
(
AK289513
)
Representative transcript
(Synaptophysin-like protein 2.)
genome : 110,009,166 - 110,021,304 (12,139)
query : 1 - 1,621 (1,621/1,621)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001285 : Synaptophysin/synaptoporin
IPR008253 : Marvel domain
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0008021 : Cellular Component : synaptic vesicle
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213954)
HIX0213954
HIT000579734 (
ENST00000475497
)
(Synaptophysin/synaptoporin family protein.)
genome : 110,017,864 - 110,019,465 (1,602)
query : 1 - 532 (532/532)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213954)
HIX0213954
HIT000386801
(
BC113102
)
(Synaptophysin-like protein 2.)
genome : 110,019,391 - 110,020,844 (1,454)
query : 23 - 636 (614/636)
2 exons
identity = 0.998
5'(0.995;1.000)3'
coverage = 0.965
InterPro :
IPR001285 : Synaptophysin/synaptoporin
IPR008253 : Marvel domain
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0008021 : Cellular Component : synaptic vesicle
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213954)
HIX0213954
HIT000386802
(
BC113103
)
(Synaptophysin-like protein 2.)
genome : 110,019,397 - 110,020,844 (1,448)
query : 17 - 624 (608/624)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.974
InterPro :
IPR001285 : Synaptophysin/synaptoporin
IPR008253 : Marvel domain
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0008021 : Cellular Component : synaptic vesicle
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213954)
HIX0213918
HIT000386550
(
BC110407
)
Representative transcript
(Hypothetical protein.)
genome : 110,023,074 - 110,024,755 (1,682)
query : 1 - 1,690 (1,690/1,713)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9.5, cyto 8, extr_plas 8, plas 5.5,
cyto_nucl 5.5, nucl 3, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213918)
HIX0213918
HIT000252906
(
AY358862
)
(Hypothetical protein.)
genome : 110,023,091 - 110,024,755 (1,665)
query : 1 - 1,665 (1,665/1,665)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 21, extr 5.5, extr_plas 5, plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213918)
HIX0199879
HIT000568462 (
ENST00000463678
)
(Ataxin-7-like protein 2.)
genome : 110,026,101 - 110,035,326 (9,226)
query : 1 - 3,022 (3,022/3,022)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199879)
HIX0199879
HIT000214300 (
NM_153340
)
(Ataxin-7-like protein 2.)
genome : 110,026,561 - 110,035,419 (8,859)
query : 1 - 2,381 (2,381/2,413)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 17, cyto 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199879)
HIX0199879
HIT000051831
(
BC036849
)
Representative transcript
(Ataxin-7-like protein 2.)
genome : 110,026,561 - 110,035,355 (8,795)
query : 1 - 2,315 (2,315/2,410)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.996;1.000)3'
coverage = 1.000
InterPro :
IPR013243 : SCA7 domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 17, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199879)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK046849
Danio
sp. (Zebrafish) : BC096979
Rattus
sp. (Rat) : BC098000
Danio
sp. (Zebrafish) : BC116583
Bos
sp. (Cow) : BC149469
Tetraodon
sp. (Tetraodon) : CR710461
Equus
sp. (Horse) : ENSECAT00000011697
Monodelphis
sp. (Opossum) : ENSMODT00000002494
Oryzias
sp. (Medaka) : ENSORLT00000012989
Pongo
sp. (Orangutan) : ENSPPYT00000001287
Tetraodon
sp. (Tetraodon) : GSTENT00007257001
Takifugu
sp. (Fugu) : SINFRUT00000137771
Takifugu
sp. (Fugu) : SINFRUT00000157365
Macaca
sp. (Macaque) : XM_001089795
Pan
sp. (Chimpanzee) : XM_513623
Canis
sp. (Dog) : XM_547242
HIX0199879
HIT000351150 (
ENST00000369870
)
(Ataxin-7-like protein 2.)
genome : 110,026,561 - 110,035,356 (8,796)
query : 1 - 2,318 (2,318/2,318)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 17, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199879)
HIX0199879
HIT000015327
(
AK090460
)
(Ataxin-7-like protein 2.)
genome : 110,028,168 - 110,035,349 (7,182)
query : 1 - 4,375 (4,375/4,375)
8 exons
identity = 0.998
5'(1.000;1.000;0.997;1.000;0.996;1.000;0.998;
0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199879)
HIX0199879
HIT000600812 (
ENST00000497545
)
(Ataxin-7-like protein 2.)
genome : 110,028,168 - 110,035,349 (7,182)
query : 1 - 4,375 (4,375/4,375)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199879)
HIX0199879
HIT000051944
(
BC037582
)
(Ataxin-7-like protein 2.)
genome : 110,032,173 - 110,035,419 (3,247)
query : 1 - 1,708 (1,708/1,740)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199879)
HIX0199879
HIT000351149 (
ENST00000369869
)
(Ataxin-7-like protein 2.)
genome : 110,032,173 - 110,035,426 (3,254)
query : 1 - 1,715 (1,715/1,715)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199879)
HIX0199879
HIT000564597 (
ENST00000459635
)
(Ataxin-7-like protein 2.)
genome : 110,033,638 - 110,035,356 (1,719)
query : 1 - 929 (929/929)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 13.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199879)
HIX0000851
HIT000559911 (
NM_001134402
)
(Cytochrome b561 domain-containing protein 1 isoform 3.)
genome : 110,036,658 - 110,043,063 (6,406)
query : 1 - 4,805 (4,805/4,816)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000477147 (
ENST00000393709
)
(Cytochrome b561 domain-containing protein 1 isoform 3.)
genome : 110,036,674 - 110,038,894 (2,221)
query : 1 - 620 (620/620)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000318665 (
NM_182580
)
(Cytochrome b561 domain-containing protein 1;)
genome : 110,036,701 - 110,043,063 (6,363)
query : 1 - 4,933 (4,933/4,944)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000559910 (
NM_001134400
)
(Cytochrome b561 domain-containing protein 1 isoform 5.)
genome : 110,036,701 - 110,043,063 (6,363)
query : 1 - 4,999 (4,999/5,010)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000559912 (
NM_001134403
)
(Cytochrome b561 domain-containing protein 1 isoform 3.)
genome : 110,036,701 - 110,043,063 (6,363)
query : 1 - 5,037 (5,037/5,048)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000559913 (
NM_001134404
)
(Cytochrome b561 domain-containing protein 1 isoform 3.)
genome : 110,036,701 - 110,043,063 (6,363)
query : 1 - 5,114 (5,114/5,125)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000046580
(
AK126707
)
(Cytochrome b561 domain-containing protein 1;)
genome : 110,036,701 - 110,041,477 (4,777)
query : 1 - 3,419 (3,419/3,419)
3 exons
identity = 0.997
5'(1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10.5, extr 9, cyto_mito 8, plas 6, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000600258 (
ENST00000496961
)
(Cytochrome b561 domain-containing protein 1;)
genome : 110,036,701 - 110,041,477 (4,777)
query : 1 - 3,424 (3,424/3,424)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10.5, extr 9, cyto_mito 8, plas 6, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000493710
(
AK299086
)
(Cytochrome b561 domain-containing protein 1 isoform 4.)
genome : 110,036,702 - 110,039,177 (2,476)
query : 1 - 913 (913/913)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11, cyto_nucl 9.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000632111 (
ENST00000533024
)
(Cytochrome b561 domain-containing protein 1 isoform 4.)
genome : 110,036,702 - 110,039,177 (2,476)
query : 1 - 913 (913/913)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11, cyto_nucl 9.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000056156
(
BX647509
)
(Cytochrome b561 domain-containing protein 1 isoform 3.)
genome : 110,036,721 - 110,043,055 (6,335)
query : 1 - 5,007 (5,007/5,027)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR004877 : Cytochrome b561 domain
IPR006593 : Cytochrome b561/ferric reductase transmembrane
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000118760 (
ENST00000310611
)
(Cytochrome b561 domain-containing protein 1 isoform 1.)
genome : 110,036,721 - 110,043,055 (6,335)
query : 1 - 5,009 (5,009/5,009)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 12, mito 9.5, extr_plas 9.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000021209
(
AK096354
)
Representative transcript
(Cytochrome b561 domain-containing protein 1;)
genome : 110,036,722 - 110,041,477 (4,756)
query : 1 - 3,321 (3,321/3,321)
3 exons
identity = 0.997
5'(1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR004877 : Cytochrome b561 domain
IPR006593 : Cytochrome b561/ferric reductase transmembrane
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC043107
Danio
sp. (Zebrafish) : BC081611
Bos
sp. (Cow) : BC134607
Equus
sp. (Horse) : ENSECAT00000011587
Macaca
sp. (Macaque) : ENSMMUT00000008153
Monodelphis
sp. (Opossum) : ENSMODT00000002475
Oryzias
sp. (Medaka) : ENSORLT00000012980
Pongo
sp. (Orangutan) : ENSPPYT00000001286
Rattus
sp. (Rat) : ENSRNOT00000040396
Tetraodon
sp. (Tetraodon) : GSTENT00007257001
Takifugu
sp. (Fugu) : SINFRUT00000157365
Canis
sp. (Dog) : XM_849538
HIX0000851
HIT000518512 (
ENST00000420578
)
(Cytochrome b561 domain-containing protein 1;)
genome : 110,036,722 - 110,041,477 (4,756)
query : 1 - 3,326 (3,326/3,326)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000498170
(
AK303546
)
(Cytochrome b561 domain-containing protein 1 isoform 1.)
genome : 110,036,722 - 110,039,081 (2,360)
query : 1 - 892 (892/892)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10.5, extr 7, cyto_mito 7, plas 6, lyso 3,
cysk_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000626278 (
ENST00000527072
)
(Cytochrome b561 domain-containing protein 1 isoform 1.)
genome : 110,036,722 - 110,039,081 (2,360)
query : 1 - 892 (892/892)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10.5, extr 7, cyto_mito 7, plas 6, lyso 3,
cysk_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000627956 (
ENST00000528785
)
(Cytochrome b561 domain-containing protein 1;)
genome : 110,036,727 - 110,045,554 (8,828)
query : 1 - 1,271 (1,271/1,271)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000334658
(
BC093683
)
(Cytochrome b561 domain-containing protein 1;)
genome : 110,036,727 - 110,038,921 (2,195)
query : 1 - 765 (765/765)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004877 : Cytochrome b561 domain
IPR006593 : Cytochrome b561/ferric reductase transmembrane
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000340128
(
BC111999
)
(Cytochrome b561 domain-containing protein 1;)
genome : 110,036,727 - 110,038,921 (2,195)
query : 1 - 765 (765/765)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004877 : Cytochrome b561 domain
IPR006593 : Cytochrome b561/ferric reductase transmembrane
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000501768
(
BC143308
)
(Cytochrome b561 domain-containing protein 1 isoform 1.)
genome : 110,036,727 - 110,038,921 (2,195)
query : 1 - 727 (727/727)
2 exons
identity = 0.999
5'(1.000;0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10.5, extr 7, cyto_mito 7, plas 6, lyso 3,
cysk_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000351148 (
ENST00000369868
)
(Cytochrome b561 domain-containing protein 1 isoform 5.)
genome : 110,036,736 - 110,039,184 (2,449)
query : 1 - 1,085 (1,085/1,085)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000489616
(
AK294992
)
(Cytochrome b561 domain-containing protein 1 isoform 1.)
genome : 110,036,736 - 110,039,184 (2,449)
query : 1 - 1,085 (1,085/1,085)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004877 : Cytochrome b561 domain
IPR006593 : Cytochrome b561/ferric reductase transmembrane
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000048671
(
AK128798
)
(Cytochrome b561 domain-containing protein 1 isoform 3.)
genome : 110,036,737 - 110,043,062 (6,326)
query : 1 - 5,075 (5,075/5,075)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR004877 : Cytochrome b561 domain
IPR006593 : Cytochrome b561/ferric reductase transmembrane
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000528129 (
ENST00000430195
)
(Cytochrome b561 domain-containing protein 1 isoform 3.)
genome : 110,036,737 - 110,043,062 (6,326)
query : 1 - 5,077 (5,077/5,077)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000851
HIT000017584
(
AK092717
)
(Conserved hypothetical protein.)
genome : 110,041,165 - 110,043,056 (1,892)
query : 1 - 1,893 (1,893/1,893)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000851)
HIX0000852
HIT000351144 (
ENST00000369864
)
(Amphoterin-induced protein 1; AMIGO-1; Alivin-2; Precursor;)
genome : 110,046,797 - 110,052,304 (5,508)
query : 1 - 5,088 (5,088/5,088)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, pero 3, lyso 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000852)
HIX0000852
HIT000000879
(
AB032989
)
(Amphoterin-induced protein 1 precursor.)
genome : 110,046,801 - 110,051,368 (4,568)
query : 1 - 4,568 (4,568/4,568)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17.5, extr_plas 13, extr 5.5, nucl 3, cyto 2,
lyso 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000852)
HIX0000852
HIT000453881
(
DQ587350
)
(Non-protein coding transcript.)
genome : 110,049,405 - 110,049,434 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000852)
HIX0000852
HIT000317430 (
NM_020703
)
(Amphoterin-induced protein 1; AMIGO-1; Alivin-2; Precursor;)
genome : 110,049,446 - 110,052,336 (2,891)
query : 1 - 2,471 (2,471/2,501)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, pero 3, lyso 2, cyto_pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000852)
HIX0000852
HIT000052457
(
BC040879
)
(Amphoterin-induced protein 1; AMIGO-1; Alivin-2; Precursor;)
genome : 110,049,446 - 110,052,304 (2,859)
query : 1 - 2,439 (2,439/2,469)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR000483 : Cysteine-rich flanking region, C-terminal
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, pero 3, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000852)
HIX0000852
HIT000351142 (
ENST00000369862
)
(Amphoterin-induced protein 1; AMIGO-1; Alivin-2; Precursor;)
genome : 110,049,690 - 110,052,360 (2,671)
query : 1 - 2,229 (2,229/2,229)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, pero 3, lyso 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000852)
HIX0000852
HIT000490302
(
AK295678
)
Representative transcript
(Amphoterin-induced protein 1; AMIGO-1; Alivin-2; Precursor;)
genome : 110,049,705 - 110,052,314 (2,610)
query : 2 - 2,191 (2,190/2,191)
2 exons
identity = 1.000
3'(1.000;0.996)5'
coverage = 1.000
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR000483 : Cysteine-rich flanking region, C-terminal
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, pero 3, lyso 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000852)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AY237729
Mus
sp. (Mouse) : BC022907
Bos
sp. (Cow) : BC151605
Danio
sp. (Zebrafish) : CU468749
Equus
sp. (Horse) : ENSECAT00000003211
Pongo
sp. (Orangutan) : ENSPPYT00000001285
Tetraodon
sp. (Tetraodon) : GSTENT00028186001
Takifugu
sp. (Fugu) : SINFRUT00000146184
Pan
sp. (Chimpanzee) : XM_001150542
Monodelphis
sp. (Opossum) : XM_001381907
Canis
sp. (Dog) : XM_547241
HIX0000852
HIT000085439
(
AY237007
)
(Amphoterin-induced protein 1; AMIGO-1; Alivin-2; Precursor;)
genome : 110,050,053 - 110,051,534 (1,482)
query : 1 - 1,482 (1,482/1,482)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR000483 : Cysteine-rich flanking region, C-terminal
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, pero 3, lyso 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000852)
HIX0028580
HIT000626943 (
ENST00000527748
)
(Probable G-protein coupled receptor 61; Biogenic amine receptor-like G-protein coupled receptor;)
genome : 110,082,494 - 110,089,882 (7,389)
query : 1 - 4,921 (4,921/4,921)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028580)
HIX0028580
HIT000504733 (
ENST00000404129
)
(Probable G-protein coupled receptor 61; Biogenic amine receptor-like G-protein coupled receptor;)
genome : 110,082,494 - 110,088,466 (5,973)
query : 1 - 2,834 (2,834/2,834)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028580)
HIX0028580
HIT000210293 (
NM_031936
)
(Probable G-protein coupled receptor 61; Biogenic amine receptor-like G-protein coupled receptor;)
genome : 110,082,494 - 110,088,455 (5,962)
query : 1 - 2,823 (2,823/2,823)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028580)
HIX0028580
HIT000422824
(
AK290027
)
(Probable G-protein coupled receptor 61; Biogenic amine receptor-like G-protein coupled receptor;)
genome : 110,082,494 - 110,087,094 (4,601)
query : 1 - 2,133 (2,133/2,133)
2 exons
identity = 1.000
5'(0.988;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028580)
HIX0028580
HIT000075185
(
AF258342
)
(Probable G-protein coupled receptor 61; Biogenic amine receptor-like G-protein coupled receptor;)
genome : 110,082,509 - 110,088,455 (5,947)
query : 1 - 2,459 (2,459/2,489)
4 exons
identity = 0.994
5'(1.000;0.989;0.998;0.985)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028580)
HIX0028580
HIT000625622 (
ENST00000526411
)
(Probable G-protein coupled receptor 61; Biogenic amine receptor-like G-protein coupled receptor;)
genome : 110,082,528 - 110,086,459 (3,932)
query : 1 - 582 (582/582)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, plas 9, mito 6, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028580)
HIX0028580
HIT000329031
(
AB209096
)
Representative transcript
(Probable G-protein coupled receptor 61; Biogenic amine receptor-like G-protein coupled receptor;)
genome : 110,082,543 - 110,089,556 (7,014)
query : 1 - 2,537 (2,537/2,557)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.992
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028580)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK133702
Bos
sp. (Cow) : BC149048
Canis
sp. (Dog) : ENSCAFT00000031537
Gallus
sp. (Chicken) : ENSGALT00000000061
Oryzias
sp. (Medaka) : ENSORLT00000000539
Pongo
sp. (Orangutan) : ENSPPYT00000001284
Pan
sp. (Chimpanzee) : ENSPTRT00000058905
Takifugu
sp. (Fugu) : SINFRUT00000175824
Rattus
sp. (Rat) : XM_001071310
Macaca
sp. (Macaque) : XM_001091354
Monodelphis
sp. (Opossum) : XM_001381916
Equus
sp. (Horse) : XM_001918043
Danio
sp. (Zebrafish) : XM_694918
HIX0028580
HIT000573906 (
ENST00000469383
)
(Probable G-protein coupled receptor 61; Biogenic amine receptor-like G-protein coupled receptor;)
genome : 110,082,543 - 110,089,556 (7,014)
query : 1 - 2,537 (2,537/2,557)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.992
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028580)
HIX0028580
HIT000633030 (
ENST00000533959
)
(Conserved hypothetical protein.)
genome : 110,082,550 - 110,085,498 (2,949)
query : 1 - 595 (595/595)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11.5, cyto_nucl 11, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028580)
HIX0028580
HIT000262622
(
BC067464
)
(Conserved hypothetical protein.)
genome : 110,085,576 - 110,087,065 (1,490)
query : 1 - 1,489 (1,489/1,489)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028580)
HIX0028580
HIT000383555
(
AB083585
)
(Probable G-protein coupled receptor 61; Biogenic amine receptor-like G-protein coupled receptor;)
genome : 110,085,645 - 110,087,000 (1,356)
query : 1 - 1,356 (1,356/1,356)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028580)
HIX0028580
HIT000715538
(
JF810889
)
(Probable G-protein coupled receptor 61; Biogenic amine receptor-like G-protein coupled receptor;)
genome : 110,085,645 - 110,087,000 (1,356)
query : 1 - 1,356 (1,356/1,356)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028580)
HIX0028580
HIT000077224
(
AF317652
)
(Probable G-protein coupled receptor 61; Biogenic amine receptor-like G-protein coupled receptor;)
genome : 110,085,645 - 110,086,899 (1,255)
query : 1 - 1,254 (1,254/1,254)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028580)
HIX0028580
HIT000335300
(
BC095507
)
(Probable G-protein coupled receptor 61; Biogenic amine receptor-like G-protein coupled receptor;)
genome : 110,085,648 - 110,086,898 (1,251)
query : 1 - 1,250 (1,250/1,250)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028580)
HIX0028580
HIT000625952 (
ENST00000526744
)
(Conserved hypothetical protein.)
genome : 110,087,933 - 110,089,881 (1,949)
query : 1 - 595 (595/595)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 14.5, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028580)
HIX0000853
HIT000203091 (
NM_006496
)
(Guanine nucleotide-binding protein G(k) subunit alpha; G(i) alpha-3;)
genome : 110,091,186 - 110,138,453 (47,268)
query : 1 - 4,731 (4,731/4,748)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito_pero 3.5, plas 3, mito 3, pero 2,
extr_plas 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000853)
HIX0000853
HIT000351131 (
ENST00000369851
)
(Guanine nucleotide-binding protein G(k) subunit alpha; G(i) alpha-3;)
genome : 110,091,233 - 110,136,975 (45,743)
query : 1 - 3,206 (3,206/3,206)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito_pero 3.5, plas 3, mito 3, pero 2,
extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000853)
HIX0000853
HIT000039882
(
BC025285
)
(Guanine nucleotide-binding protein G(k) subunit alpha; G(i) alpha-3;)
genome : 110,091,233 - 110,136,136 (44,904)
query : 1 - 2,367 (2,367/2,420)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito_pero 3.5, plas 3, mito 3, pero 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000853)
HIX0000853
HIT000191143
(
J03238
)
(Guanine nucleotide-binding protein G(k) subunit alpha; G(i) alpha-3;)
genome : 110,091,252 - 110,134,998 (43,747)
query : 1 - 1,209 (1,209/1,211)
9 exons
identity = 0.999
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.998
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito_pero 3.5, plas 3, mito 3, pero 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000853)
HIX0000853
HIT000430557
(
AK311691
)
(Guanine nucleotide-binding protein G(k) subunit alpha; G(i) alpha-3;)
genome : 110,091,257 - 110,135,223 (43,967)
query : 2 - 1,364 (1,363/1,364)
10 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;0.907;1.000;1.000;
1.000;1.000;0.996)3'
coverage = 0.999
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 20.5, extr_plas 11, cyto 7, mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000853)
HIX0000853
HIT000431118
(
AK312252
)
(Guanine nucleotide-binding protein G(k) subunit alpha; G(i) alpha-3;)
genome : 110,091,257 - 110,134,855 (43,599)
query : 1 - 1,151 (1,151/1,151)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito_pero 3.5, plas 3, mito 3, pero 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000853)
HIX0000853
HIT000191136
(
J03198
)
(Guanine nucleotide-binding protein G(k) subunit alpha; G(i) alpha-3;)
genome : 110,091,281 - 110,136,130 (44,850)
query : 1 - 2,313 (2,313/2,313)
9 exons
identity = 1.000
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito_pero 3.5, plas 3, mito 3, pero 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000853)
HIX0000853
HIT000195175
(
M27543
)
Representative transcript
(Guanine nucleotide-binding protein G(k) subunit alpha; G(i) alpha-3;)
genome : 110,091,301 - 110,136,975 (45,675)
query : 1 - 3,143 (3,143/3,143)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito_pero 3.5, plas 3, mito 3, pero 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000853)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK004566
Danio
sp. (Zebrafish) : BC076100
Bos
sp. (Cow) : BC102645
Danio
sp. (Zebrafish) : BC155288
Gallus
sp. (Chicken) : ENSGALT00000005004
Monodelphis
sp. (Opossum) : ENSMODT00000002458
Oryzias
sp. (Medaka) : ENSORLT00000011104
Pongo
sp. (Orangutan) : ENSPPYT00000001283
Tetraodon
sp. (Tetraodon) : GSTENT00027485001
Gallus
sp. (Chicken) : L24549
Rattus
sp. (Rat) : M20713
Takifugu
sp. (Fugu) : SINFRUT00000167286
Macaca
sp. (Macaque) : XM_001091470
Equus
sp. (Horse) : XM_001494890
Pan
sp. (Chimpanzee) : XM_513624
Canis
sp. (Dog) : XM_849521
HIX0000853
HIT000191117
(
J03005
)
(Guanine nucleotide-binding protein G(k) subunit alpha; G(i) alpha-3;)
genome : 110,091,343 - 110,135,396 (44,054)
query : 9 - 1,525 (1,517/1,543)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995)3'
coverage = 0.983
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito_pero 3.5, plas 3, mito 3, pero 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000853)
HIX0000853
HIT000080755
(
AF493907
)
(Guanine nucleotide-binding protein G(k) subunit alpha; G(i) alpha-3;)
genome : 110,091,343 - 110,134,855 (43,513)
query : 1 - 1,065 (1,065/1,065)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito_pero 3.5, plas 3, mito 3, pero 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000853)
HIX0000853
HIT000266754
(
BT019973
)
(Guanine nucleotide-binding protein G(k) subunit alpha; G(i) alpha-3;)
genome : 110,091,343 - 110,134,853 (43,511)
query : 1 - 1,063 (1,063/1,065)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.998
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito_pero 3.5, plas 3, mito 3, pero 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000853)
HIX0000853
HIT000266755
(
BT019974
)
(Guanine nucleotide-binding protein G(k) subunit alpha; G(i) alpha-3;)
genome : 110,091,343 - 110,134,853 (43,511)
query : 1 - 1,063 (1,063/1,065)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.998
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito_pero 3.5, plas 3, mito 3, pero 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000853)
HIX0000853
HIT000049340
(
AK130069
)
(Guanine nucleotide-binding protein G(k) subunit alpha; G(i) alpha-3; Fragment;)
genome : 110,129,478 - 110,136,130 (6,653)
query : 1 - 1,404 (1,404/1,404)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000853)
HIX0160932
HIT000534350 (
ENST00000436416
)
(Conserved hypothetical protein.)
genome : 110,138,847 - 110,140,403 (1,557)
query : 1 - 596 (596/596)
2 exons
identity = 0.988
3'(1.000;0.984)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, pero 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160932)
HIX0149150
HIT000470900 (
ENST00000384976
)
(Non-protein coding transcript.)
genome : 110,141,515 - 110,141,589 (75)
query : 1 - 75 (75/75)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0149150)
HIX0149150
HIT000657994 (
NR_029583
)
(Non-protein coding transcript.)
genome : 110,141,515 - 110,141,589 (75)
query : 1 - 75 (75/75)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0149150)
HIX0000854
HIT000201977 (
NM_005272
)
(Guanine nucleotide-binding protein G(t) subunit alpha-2; Transducin alpha-2 chain;)
genome : 110,145,889 - 110,155,705 (9,817)
query : 1 - 1,365 (1,365/1,384)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, plas 4.5, extr_plas 4, nucl 3, pero 3,
mito_pero 3, extr 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000854)
HIX0000854
HIT000029447
(
BC000233
)
Representative transcript
(Guanine nucleotide-binding protein G(t) subunit alpha-2; Transducin alpha-2 chain;)
genome : 110,145,889 - 110,155,673 (9,785)
query : 1 - 1,333 (1,333/1,352)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;0.992;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, plas 4.5, extr_plas 4, nucl 3, pero 3,
mito_pero 3, extr 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000854)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC016272
Danio
sp. (Zebrafish) : BC059464
Tetraodon
sp. (Tetraodon) : CR681867
Canis
sp. (Dog) : ENSCAFT00000031533
Monodelphis
sp. (Opossum) : ENSMODT00000002406
Oryzias
sp. (Medaka) : ENSORLT00000007583
Pongo
sp. (Orangutan) : ENSPPYT00000001282
Rattus
sp. (Rat) : ENSRNOT00000026237
Bos
sp. (Cow) : M11116
Takifugu
sp. (Fugu) : SINFRUT00000148004
Macaca
sp. (Macaque) : XM_001091580
Equus
sp. (Horse) : XM_001495016
Pan
sp. (Chimpanzee) : XM_524787
HIX0000854
HIT000308032 (
ENST00000351050
)
(Guanine nucleotide-binding protein G(t) subunit alpha-2; Transducin alpha-2 chain;)
genome : 110,145,889 - 110,155,679 (9,791)
query : 1 - 1,339 (1,339/1,339)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, plas 4.5, extr_plas 4, nucl 3, pero 3,
mito_pero 3, extr 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000854)
HIX0000854
HIT000080757
(
AF493909
)
(Guanine nucleotide-binding protein G(t) subunit alpha-2; Transducin alpha-2 chain;)
genome : 110,145,976 - 110,155,492 (9,517)
query : 1 - 1,065 (1,065/1,065)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, plas 4.5, extr_plas 4, nucl 3, pero 3,
mito_pero 3, extr 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000854)
HIX0000854
HIT000266406
(
BT009844
)
(Guanine nucleotide-binding protein G(t) subunit alpha-2; Transducin alpha-2 chain;)
genome : 110,145,977 - 110,155,492 (9,516)
query : 1 - 1,064 (1,064/1,065)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;0.992;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, plas 4.5, extr_plas 4, nucl 3, pero 3,
mito_pero 3, extr 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000854)
HIX0000855
HIT000630853 (
ENST00000531734
)
(AMP deaminase 2 isoform 2.)
genome : 110,158,726 - 110,168,820 (10,095)
query : 1 - 572 (572/572)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 12, nucl 11, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000427773
(
AK308907
)
(AMP deaminase 2 isoform 2.)
genome : 110,162,126 - 110,173,029 (10,904)
query : 1 - 2,355 (2,355/2,357)
17 exons
identity = 1.000
5'(1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001365 : Adenosine/AMP deaminase domain
IPR006329 : AMP deaminase
GO :
0003876 : Molecular Function : AMP deaminase activity
0006188 : Biological Process : IMP biosynthetic process
0019239 : Molecular Function : deaminase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 3.5, cyto_nucl 3.5, pero 3, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000625515 (
ENST00000526301
)
(AMP deaminase 2 isoform 2.)
genome : 110,162,126 - 110,173,028 (10,903)
query : 1 - 2,354 (2,354/2,354)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 3.5, cyto_nucl 3.5, pero 3, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000317821 (
NM_139156
)
(AMP deaminase 2 isoform 2.)
genome : 110,162,435 - 110,174,677 (12,243)
query : 1 - 3,756 (3,756/3,785)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 5.5, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000724030 (
NM_001257360
)
(AMP deaminase 2; EC=3.5.4.6; AMP deaminase isoform L;)
genome : 110,162,435 - 110,174,677 (12,243)
query : 1 - 4,109 (4,109/4,138)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, mito_pero 14.8333, cyto_mito 14.3333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000008980
(
AK025706
)
(AMP deaminase 2 isoform 2.)
genome : 110,162,459 - 110,174,672 (12,214)
query : 1 - 3,727 (3,727/3,745)
18 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;0.990;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001365 : Adenosine/AMP deaminase domain
IPR006329 : AMP deaminase
IPR006650 : Adenosine/AMP deaminase active site
GO :
0003876 : Molecular Function : AMP deaminase activity
0006188 : Biological Process : IMP biosynthetic process
0009168 : Biological Process : purine ribonucleoside monophosphate biosynthetic process
0019239 : Molecular Function : deaminase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 5.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000134745 (
ENST00000342115
)
(AMP deaminase 2 isoform 2.)
genome : 110,162,459 - 110,174,673 (12,215)
query : 1 - 3,728 (3,728/3,728)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 5.5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000573576 (
ENST00000469039
)
(Non-protein coding transcript.)
genome : 110,162,468 - 110,163,733 (1,266)
query : 1 - 513 (513/513)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000578749 (
ENST00000474459
)
(AMP deaminase 2 isoform 3.)
genome : 110,162,469 - 110,169,420 (6,952)
query : 1 - 814 (814/814)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000627841 (
ENST00000528667
)
(AMP deaminase 2; EC=3.5.4.6; AMP deaminase isoform L;)
genome : 110,162,507 - 110,173,774 (11,268)
query : 1 - 3,134 (3,134/3,134)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, mito_pero 14.8333, cyto_mito 14.3333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000033394
(
BC007711
)
(AMP deaminase 2 isoform 2.)
genome : 110,162,510 - 110,174,672 (12,163)
query : 1 - 3,676 (3,676/3,693)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001365 : Adenosine/AMP deaminase domain
IPR006329 : AMP deaminase
IPR006650 : Adenosine/AMP deaminase active site
GO :
0003876 : Molecular Function : AMP deaminase activity
0006188 : Biological Process : IMP biosynthetic process
0009168 : Biological Process : purine ribonucleoside monophosphate biosynthetic process
0019239 : Molecular Function : deaminase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 5.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000265658
(
BC075844
)
(AMP deaminase 2 isoform 2.)
genome : 110,162,510 - 110,174,672 (12,163)
query : 1 - 3,676 (3,676/3,693)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001365 : Adenosine/AMP deaminase domain
IPR006329 : AMP deaminase
IPR006650 : Adenosine/AMP deaminase active site
GO :
0003876 : Molecular Function : AMP deaminase activity
0006188 : Biological Process : IMP biosynthetic process
0009168 : Biological Process : purine ribonucleoside monophosphate biosynthetic process
0019239 : Molecular Function : deaminase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 5.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000433360
(
AK314494
)
Representative transcript
(AMP deaminase 2; EC=3.5.4.6; AMP deaminase isoform L;)
genome : 110,162,512 - 110,173,774 (11,263)
query : 1 - 3,129 (3,129/3,129)
19 exons
identity = 0.999
5'(0.997;0.997;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001365 : Adenosine/AMP deaminase domain
IPR006329 : AMP deaminase
IPR006650 : Adenosine/AMP deaminase active site
GO :
0003876 : Molecular Function : AMP deaminase activity
0006188 : Biological Process : IMP biosynthetic process
0009168 : Biological Process : purine ribonucleoside monophosphate biosynthetic process
0019239 : Molecular Function : deaminase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, mito_pero 14.8333, cyto_mito 14.3333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179477
Mus
sp. (Mouse) : AK004759
Rattus
sp. (Rat) : BC099782
Danio
sp. (Zebrafish) : BC107820
Tetraodon
sp. (Tetraodon) : CR652752
Pongo
sp. (Orangutan) : CR859072
Equus
sp. (Horse) : ENSECAT00000027063
Monodelphis
sp. (Opossum) : ENSMODT00000002396
Oryzias
sp. (Medaka) : ENSORLT00000000560
Oryzias
sp. (Medaka) : ENSORLT00000007530
Takifugu
sp. (Fugu) : SINFRUT00000136831
Canis
sp. (Dog) : XM_847506
Pan
sp. (Chimpanzee) : XR_025582
Gallus
sp. (Chicken) : XR_026741
Bos
sp. (Cow) : XR_028304
HIX0000855
HIT000218337
(
U16267
)
(AMP deaminase 2 isoform 2.)
genome : 110,162,515 - 110,169,421 (6,907)
query : 1 - 901 (901/901)
6 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR006329 : AMP deaminase
GO :
0003876 : Molecular Function : AMP deaminase activity
0006188 : Biological Process : IMP biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14.5, nucl 6.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000200812 (
NM_004037
)
(AMP deaminase 2; EC=3.5.4.6; AMP deaminase isoform L;)
genome : 110,163,203 - 110,174,677 (11,475)
query : 1 - 3,976 (3,976/4,005)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, mito_pero 14.8333, cyto_mito 14.3333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000630338 (
ENST00000531203
)
(AMP deaminase 2; EC=3.5.4.6; AMP deaminase isoform L;)
genome : 110,163,230 - 110,168,971 (5,742)
query : 1 - 575 (575/575)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000106959 (
ENST00000256578
)
(AMP deaminase 2; EC=3.5.4.6; AMP deaminase isoform L;)
genome : 110,163,276 - 110,174,673 (11,398)
query : 1 - 3,899 (3,899/3,899)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, mito_pero 14.8333, cyto_mito 14.3333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000218338
(
U16268
)
(AMP deaminase 2; EC=3.5.4.6; AMP deaminase isoform L;)
genome : 110,163,276 - 110,169,423 (6,148)
query : 1 - 1,129 (1,129/1,129)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR006329 : AMP deaminase
GO :
0003876 : Molecular Function : AMP deaminase activity
0006188 : Biological Process : IMP biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 4.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000497563
(
AK302939
)
(AMP deaminase 2 isoform 3.)
genome : 110,163,696 - 110,174,163 (10,468)
query : 3 - 2,840 (2,838/2,840)
17 exons
identity = 0.999
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 0.999
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001365 : Adenosine/AMP deaminase domain
IPR006329 : AMP deaminase
IPR006650 : Adenosine/AMP deaminase active site
GO :
0003876 : Molecular Function : AMP deaminase activity
0006188 : Biological Process : IMP biosynthetic process
0009168 : Biological Process : purine ribonucleoside monophosphate biosynthetic process
0019239 : Molecular Function : deaminase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 11, mito 9, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000312392 (
ENST00000358729
)
(AMP deaminase 2 isoform 3.)
genome : 110,163,696 - 110,174,163 (10,468)
query : 1 - 2,838 (2,838/2,838)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 11, mito 9, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000351120 (
ENST00000369840
)
(AMP deaminase 2; EC=3.5.4.6; AMP deaminase isoform L;)
genome : 110,163,725 - 110,174,320 (10,596)
query : 1 - 3,130 (3,130/3,130)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 10.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000590043 (
ENST00000486282
)
(AMP deaminase 2 isoform 3.)
genome : 110,163,737 - 110,169,080 (5,344)
query : 1 - 582 (582/582)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 11.8333, cyto 6.5, mito 6,
cyto_pero 5.33333, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000627452 (
ENST00000528270
)
(AMP deaminase 2; EC=3.5.4.6; AMP deaminase isoform L;)
genome : 110,163,774 - 110,168,823 (5,050)
query : 1 - 588 (588/588)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, mito 9.5, mito_nucl 8, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000627040 (
ENST00000527846
)
(AMP deaminase 2 isoform 2.)
genome : 110,163,891 - 110,169,040 (5,150)
query : 1 - 585 (585/585)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, extr 12, cyto_nucl 10.8333, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000627632 (
ENST00000528454
)
(AMP deaminase 2 isoform 4.)
genome : 110,166,436 - 110,173,839 (7,404)
query : 1 - 2,728 (2,728/2,728)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14, nucl 10, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000564605 (
ENST00000459643
)
(AMP deaminase 2 isoform 3.)
genome : 110,166,461 - 110,169,039 (2,579)
query : 1 - 550 (550/550)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 7.5, cyto_nucl 7.5, E.R._mito 7.5,
mito_pero 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000724031 (
NM_001257361
)
(AMP deaminase 2 isoform 4.)
genome : 110,166,610 - 110,174,677 (8,068)
query : 1 - 3,392 (3,392/3,421)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14, nucl 10, extr 2, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000491018
(
AK296394
)
(AMP deaminase 2 isoform 4.)
genome : 110,166,654 - 110,173,839 (7,186)
query : 1 - 2,510 (2,510/2,510)
18 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;0.993)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001365 : Adenosine/AMP deaminase domain
IPR006329 : AMP deaminase
IPR006650 : Adenosine/AMP deaminase active site
GO :
0003876 : Molecular Function : AMP deaminase activity
0006188 : Biological Process : IMP biosynthetic process
0009168 : Biological Process : purine ribonucleoside monophosphate biosynthetic process
0019239 : Molecular Function : deaminase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14, nucl 10, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000320027 (
NM_203404
)
(AMP deaminase 2 isoform 3.)
genome : 110,168,049 - 110,174,677 (6,629)
query : 1 - 3,394 (3,394/3,423)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 16, nucl 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000215649
(
S47833
)
(AMP deaminase 2 isoform 3.)
genome : 110,168,049 - 110,174,671 (6,623)
query : 1 - 3,359 (3,359/3,359)
16 exons
identity = 0.991
5'(0.923;1.000;0.991;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001365 : Adenosine/AMP deaminase domain
IPR006329 : AMP deaminase
IPR006650 : Adenosine/AMP deaminase active site
GO :
0003876 : Molecular Function : AMP deaminase activity
0006188 : Biological Process : IMP biosynthetic process
0009168 : Biological Process : purine ribonucleoside monophosphate biosynthetic process
0019239 : Molecular Function : deaminase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 16, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000477126 (
ENST00000393688
)
(AMP deaminase 2 isoform 3.)
genome : 110,168,220 - 110,174,671 (6,452)
query : 1 - 3,217 (3,217/3,217)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 16, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000633206 (
ENST00000534144
)
(AMP deaminase 2; EC=3.5.4.6; AMP deaminase isoform L;)
genome : 110,168,693 - 110,169,534 (842)
query : 1 - 544 (544/544)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 12, mito 6, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000624651 (
ENST00000525415
)
(AMP deaminase 2; EC=3.5.4.6; AMP deaminase isoform L;)
genome : 110,168,820 - 110,169,787 (968)
query : 1 - 580 (580/580)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 11, extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000218339
(
U16270
)
(AMP deaminase 2; EC=3.5.4.6; AMP deaminase isoform L;)
genome : 110,169,418 - 110,174,756 (5,339)
query : 1 - 2,857 (2,857/2,857)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001365 : Adenosine/AMP deaminase domain
IPR006329 : AMP deaminase
IPR006650 : Adenosine/AMP deaminase active site
GO :
0003876 : Molecular Function : AMP deaminase activity
0006188 : Biological Process : IMP biosynthetic process
0009168 : Biological Process : purine ribonucleoside monophosphate biosynthetic process
0019239 : Molecular Function : deaminase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 9, cyto 7, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000624221 (
ENST00000524975
)
(Conserved hypothetical protein.)
genome : 110,169,545 - 110,170,477 (933)
query : 1 - 678 (678/678)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 5.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000628460 (
ENST00000529299
)
(AMP deaminase 2; EC=3.5.4.6; AMP deaminase isoform L;)
genome : 110,170,391 - 110,171,157 (767)
query : 1 - 588 (588/588)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 5.5, cyto_pero 4.83333,
cyto_nucl 4.66667, nucl 2.5, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000631942 (
ENST00000532851
)
(AMP deaminase 2; EC=3.5.4.6; AMP deaminase isoform L;)
genome : 110,171,001 - 110,172,314 (1,314)
query : 1 - 865 (865/865)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, nucl 7.5, extr 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0160049
HIT000351123 (
ENST00000369843
)
(Conserved hypothetical protein.)
genome : 110,171,039 - 110,172,927 (1,889)
query : 1 - 688 (688/688)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 11, cyto 3.5, cyto_pero 3.33333,
cyto_nucl 3.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160049)
HIX0000855
HIT000632218 (
ENST00000533132
)
(AMP deaminase 2; EC=3.5.4.6; AMP deaminase isoform L;)
genome : 110,171,156 - 110,172,174 (1,019)
query : 1 - 717 (717/717)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 7.5, cyto_nucl 6, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000571693 (
ENST00000467071
)
(AMP deaminase 2; EC=3.5.4.6; AMP deaminase isoform L;)
genome : 110,171,336 - 110,171,982 (647)
query : 1 - 556 (556/556)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 4, cyto 4, cyto_pero 3.5, mito_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000583962 (
ENST00000479919
)
(AMP deaminase 2; EC=3.5.4.6; AMP deaminase isoform L;)
genome : 110,171,715 - 110,173,662 (1,948)
query : 1 - 690 (690/690)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 13, cyto_nucl 10.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000580868 (
ENST00000476688
)
(AMP deaminase 2; EC=3.5.4.6; AMP deaminase isoform L;)
genome : 110,171,832 - 110,174,190 (2,359)
query : 1 - 1,111 (1,111/1,111)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12.5, nucl 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000628124 (
ENST00000528958
)
(AMP deaminase 2; EC=3.5.4.6; AMP deaminase isoform L;)
genome : 110,173,260 - 110,174,122 (863)
query : 1 - 714 (714/714)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 14, cyto 10, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0000855
HIT000446117
(
DQ579586
)
(Non-protein coding transcript.)
genome : 110,173,618 - 110,173,647 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000855)
HIX0160224
HIT000509898 (
ENST00000411964
)
(Ribosomal protein L30, ferredoxin-like fold domain containing protein.)
genome : 110,193,992 - 110,194,721 (730)
query : 1 - 730 (730/730)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 7, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160224)
HIX0000856
HIT000213382 (
NM_147148
)
(Glutathione S-transferase Mu 4; EC=2.5.1.18; GST class-mu 4; GST-Mu2; GSTM4-4;)
genome : 110,198,698 - 110,208,123 (9,426)
query : 1 - 1,372 (1,372/1,372)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 16, nucl 4, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000856)
HIX0000856
HIT000197860 (
NM_000850
)
(Glutathione S-transferase Mu 4; EC=2.5.1.18; GST class-mu 4; GST-Mu2; GSTM4-4;)
genome : 110,198,698 - 110,204,331 (5,634)
query : 1 - 1,426 (1,426/1,441)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000856)
HIX0000856
HIT000562708 (
NR_024538
)
(Glutathione S-transferase Mu 4; EC=2.5.1.18; GST class-mu 4; GST-Mu2; GSTM4-4;)
genome : 110,198,698 - 110,204,331 (5,634)
query : 1 - 1,344 (1,344/1,359)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 5, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000856)
HIX0000856
HIT000424677
(
AK291880
)
(Glutathione S-transferase Mu 4; EC=2.5.1.18; GST class-mu 4; GST-Mu2; GSTM4-4;)
genome : 110,198,698 - 110,204,059 (5,362)
query : 1 - 1,154 (1,154/1,154)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
InterPro :
IPR003081 : Glutathione S-transferase, Mu class
IPR004045 : Glutathione S-transferase, N-terminal
IPR004046 : Glutathione S-transferase, C-terminal
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR012336 : Thioredoxin-like fold
GO :
0004364 : Molecular Function : glutathione transferase activity
0005515 : Molecular Function : protein binding
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000856)
HIX0000856
HIT000351116 (
ENST00000369836
)
(Glutathione S-transferase Mu 4; EC=2.5.1.18; GST class-mu 4; GST-Mu2; GSTM4-4;)
genome : 110,198,703 - 110,204,322 (5,620)
query : 1 - 1,412 (1,412/1,412)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000856)
HIX0000856
HIT000129920 (
ENST00000336075
)
(Glutathione S-transferase Mu 4; EC=2.5.1.18; GST class-mu 4; GST-Mu2; GSTM4-4;)
genome : 110,198,727 - 110,204,235 (5,509)
query : 1 - 1,118 (1,118/1,118)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000856)
HIX0000856
HIT000341034
(
DQ062813
)
(Glutathione S-transferase Mu 4; EC=2.5.1.18; GST class-mu 4; GST-Mu2; GSTM4-4;)
genome : 110,198,727 - 110,204,235 (5,509)
query : 1 - 1,118 (1,118/1,118)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.991;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
InterPro :
IPR003081 : Glutathione S-transferase, Mu class
IPR004045 : Glutathione S-transferase, N-terminal
IPR004046 : Glutathione S-transferase, C-terminal
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR012336 : Thioredoxin-like fold
GO :
0004364 : Molecular Function : glutathione transferase activity
0005515 : Molecular Function : protein binding
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000856)
HIX0000856
HIT000429866
(
AK311000
)
(Glutathione S-transferase Mu 4; EC=2.5.1.18; GST class-mu 4; GST-Mu2; GSTM4-4;)
genome : 110,198,728 - 110,199,958 (1,231)
query : 2 - 946 (945/946)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.999
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
InterPro :
IPR004045 : Glutathione S-transferase, N-terminal
IPR012336 : Thioredoxin-like fold
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 7.5, cyto_nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000856)
HIX0000856
HIT000037155
(
BC015513
)
(Glutathione S-transferase Mu 4; EC=2.5.1.18; GST class-mu 4; GST-Mu2; GSTM4-4;)
genome : 110,198,738 - 110,204,322 (5,585)
query : 1 - 1,377 (1,377/1,401)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.991;
0.998)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
InterPro :
IPR003081 : Glutathione S-transferase, Mu class
IPR004045 : Glutathione S-transferase, N-terminal
IPR004046 : Glutathione S-transferase, C-terminal
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR012336 : Thioredoxin-like fold
GO :
0004364 : Molecular Function : glutathione transferase activity
0005515 : Molecular Function : protein binding
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000856)
HIX0000856
HIT000569463 (
ENST00000464733
)
(Glutathione S-transferase Mu 4; EC=2.5.1.18; GST class-mu 4; GST-Mu2; GSTM4-4;)
genome : 110,198,739 - 110,200,293 (1,555)
query : 1 - 772 (772/772)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 11, cyto_nucl 9.33333, cyto 5.5,
extr_plas 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000856)
HIX0000856
HIT000197036
(
M99422
)
Representative transcript
(Glutathione S-transferase Mu 4; EC=2.5.1.18; GST class-mu 4; GST-Mu2; GSTM4-4;)
genome : 110,198,744 - 110,208,118 (9,375)
query : 5 - 1,323 (1,319/1,323)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.991;
0.996)3'
coverage = 0.997
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
InterPro :
IPR003081 : Glutathione S-transferase, Mu class
IPR004045 : Glutathione S-transferase, N-terminal
IPR004046 : Glutathione S-transferase, C-terminal
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR012336 : Thioredoxin-like fold
GO :
0004364 : Molecular Function : glutathione transferase activity
0005515 : Molecular Function : protein binding
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 16, nucl 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000856)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB025799
Mus
sp. (Mouse) : BC051924
Rattus
sp. (Rat) : BC059130
Bos
sp. (Cow) : BC142536
Danio
sp. (Zebrafish) : BC154218
Pongo
sp. (Orangutan) : CR859804
Equus
sp. (Horse) : ENSECAT00000026945
Monodelphis
sp. (Opossum) : ENSMODT00000002334
Oryzias
sp. (Medaka) : ENSORLT00000007453
Takifugu
sp. (Fugu) : SINFRUT00000170644
Canis
sp. (Dog) : XM_537038
HIX0000856
HIT000566634 (
ENST00000461767
)
(Glutathione S-transferase Mu 4; EC=2.5.1.18; GST class-mu 4; GST-Mu2; GSTM4-4;)
genome : 110,198,740 - 110,200,256 (1,517)
query : 1 - 804 (804/804)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11, mito 10, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000856)
HIX0000856
HIT000339133
(
BC108729
)
(Glutathione S-transferase Mu 4; EC=2.5.1.18; GST class-mu 4; GST-Mu2; GSTM4-4;)
genome : 110,198,753 - 110,204,322 (5,570)
query : 13 - 1,374 (1,362/1,388)
8 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000;1.000;0.991;
1.000)3'
coverage = 0.991
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
InterPro :
IPR003081 : Glutathione S-transferase, Mu class
IPR004045 : Glutathione S-transferase, N-terminal
IPR004046 : Glutathione S-transferase, C-terminal
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR012336 : Thioredoxin-like fold
GO :
0004364 : Molecular Function : glutathione transferase activity
0005515 : Molecular Function : protein binding
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000856)
HIX0000856
HIT000583635 (
ENST00000479578
)
(Glutathione S-transferase Mu 1; EC=2.5.1.18; GST class-mu 1; GSTM1-1;)
genome : 110,198,743 - 110,200,593 (1,851)
query : 1 - 646 (646/646)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13.5, nucl 9, extr 3, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000856)
HIX0000856
HIT000124688 (
ENST00000326729
)
(Glutathione S-transferase Mu 4; EC=2.5.1.18; GST class-mu 4; GST-Mu2; GSTM4-4;)
genome : 110,198,744 - 110,208,118 (9,375)
query : 1 - 1,321 (1,321/1,321)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 16, nucl 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000856)
HIX0000856
HIT000196922
(
M96234
)
(Glutathione S-transferase Mu 4; EC=2.5.1.18; GST class-mu 4; GST-Mu2; GSTM4-4;)
genome : 110,198,749 - 110,204,037 (5,289)
query : 1 - 1,081 (1,081/1,081)
8 exons
identity = 0.998
5'(0.997;1.000;0.985;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
InterPro :
IPR003081 : Glutathione S-transferase, Mu class
IPR004045 : Glutathione S-transferase, N-terminal
IPR004046 : Glutathione S-transferase, C-terminal
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR012336 : Thioredoxin-like fold
GO :
0004364 : Molecular Function : glutathione transferase activity
0005515 : Molecular Function : protein binding
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000856)
HIX0000856