bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0000900
HIT000075166
(
AF257238
)
Representative transcript
(Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform 1.)
genome : 113,933,371 - 114,224,996 (291,626)
query : 425 - 4,276 (3,852/4,288)
22 exons
identity = 0.995
5'(0.995;1.000;1.000;1.000;0.993;1.000)3'
coverage = 0.901
InterPro :
IPR001202 : WW domain
IPR001478 : PDZ domain
IPR008144 : Guanylate kinase-like
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
IPR020590 : Guanylate kinase, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 11.5, cyto 7.5, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000900)
HIX0000900
HIT000350897 (
ENST00000369617
)
(Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform 2.)
genome : 113,933,371 - 114,225,056 (291,686)
query : 1 - 3,911 (3,911/3,911)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000900)
HIX0000900
HIT000214097 (
NM_152900
)
(Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform 2.)
genome : 113,933,475 - 114,228,545 (295,071)
query : 1 - 7,221 (7,221/7,221)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000900)
HIX0000900
HIT000560765 (
NM_001142782
)
(Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3; Membrane-associated guanylate kinase inverted 3; MAGI-3;)
genome : 113,933,475 - 114,228,545 (295,071)
query : 1 - 6,536 (6,536/6,536)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 13, mito 5, cyto 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000900)
HIX0000900
HIT000390199
(
BC130409
)
(Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform 2.)
genome : 113,933,475 - 114,224,904 (291,430)
query : 1 - 3,580 (3,580/3,580)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001202 : WW domain
IPR001478 : PDZ domain
IPR008144 : Guanylate kinase-like
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
IPR020590 : Guanylate kinase, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000900)
HIX0000900
HIT000502574
(
BC144144
)
(Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform 2.)
genome : 113,933,475 - 114,224,903 (291,429)
query : 1 - 3,653 (3,653/3,653)
22 exons
identity = 0.999
5'(1.000;1.000;0.984;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001202 : WW domain
IPR001478 : PDZ domain
IPR008144 : Guanylate kinase-like
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
IPR020590 : Guanylate kinase, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000900)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF213258
Rattus
sp. (Rat) : AF255614
Gallus
sp. (Chicken) : AJ851412
Equus
sp. (Horse) : ENSECAT00000014000
Monodelphis
sp. (Opossum) : ENSMODT00000001064
Oryzias
sp. (Medaka) : ENSORLT00000019840
Pongo
sp. (Orangutan) : ENSPPYT00000001218
Pan
sp. (Chimpanzee) : ENSPTRT00000002103
Tetraodon
sp. (Tetraodon) : GSTENT00033902001
Takifugu
sp. (Fugu) : SINFRUT00000168054
Macaca
sp. (Macaque) : XM_001097865
Canis
sp. (Dog) : XM_540332
Bos
sp. (Cow) : XM_612177
Danio
sp. (Zebrafish) : XM_685098
HIX0000900
HIT000117689 (
ENST00000307546
)
(Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3; Membrane-associated guanylate kinase inverted 3; MAGI-3;)
genome : 113,933,581 - 114,228,545 (294,965)
query : 1 - 6,430 (6,430/6,430)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 13, mito 5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000900)
HIX0000900
HIT000350895 (
ENST00000369615
)
(Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform 2.)
genome : 113,933,594 - 114,228,545 (294,952)
query : 1 - 6,508 (6,508/6,508)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000900)
HIX0000900
HIT000350891 (
ENST00000369611
)
(Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform 2.)
genome : 113,933,611 - 114,225,056 (291,446)
query : 1 - 3,596 (3,596/3,596)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000900)
HIX0000900
HIT000074093
(
AF213259
)
(Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform 2.)
genome : 113,933,656 - 114,225,009 (291,354)
query : 1 - 3,504 (3,504/3,504)
21 exons
identity = 0.998
5'(1.000;1.000;0.992;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001202 : WW domain
IPR001478 : PDZ domain
IPR008144 : Guanylate kinase-like
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
IPR020590 : Guanylate kinase, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 6.5, cyto_nucl 5.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000900)
HIX0000900
HIT000001349
(
AB046854
)
(Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform 2.)
genome : 114,133,102 - 114,228,492 (95,391)
query : 7 - 5,640 (5,634/5,640)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.1667, nucl 15, cyto 11,
cyto_mito 7.16667, cyto_golg 7.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000900)
HIX0000900
HIT000009691
(
AK026417
)
(Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform 1.)
genome : 114,201,838 - 114,227,224 (25,387)
query : 1 - 2,267 (2,267/2,283)
6 exons
identity = 0.998
5'(0.980;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000900)
HIX0000900
HIT000430455
(
AK311589
)
(Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform 1.)
genome : 114,223,533 - 114,226,812 (3,280)
query : 1 - 1,514 (1,514/1,514)
3 exons
identity = 0.999
5'(1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000900)
HIX0000901
HIT000046646
(
AK126773
)
(Putative homeodomain transcription factor 1;)
genome : 114,239,453 - 114,257,834 (18,382)
query : 1 - 4,314 (4,314/4,314)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;0.989;1.000;0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000901)
HIX0000901
HIT000579198 (
ENST00000474926
)
(Putative homeodomain transcription factor 1;)
genome : 114,239,453 - 114,257,834 (18,382)
query : 1 - 4,314 (4,314/4,314)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000901)
HIX0000901
HIT000203197 (
NM_006608
)
(Putative homeodomain transcription factor 1;)
genome : 114,239,824 - 114,301,777 (61,954)
query : 1 - 3,244 (3,244/3,244)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000901)
HIX0000901
HIT000350876 (
ENST00000369596
)
(Putative homeodomain transcription factor 1;)
genome : 114,239,824 - 114,301,777 (61,954)
query : 1 - 3,085 (3,085/3,085)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000901)
HIX0000901
HIT000476813 (
ENST00000393357
)
(Putative homeodomain transcription factor 1;)
genome : 114,239,824 - 114,301,777 (61,954)
query : 1 - 3,244 (3,244/3,244)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000901)
HIX0000901
HIT000350884 (
ENST00000369604
)
(Putative homeodomain transcription factor 1;)
genome : 114,239,827 - 114,302,098 (62,272)
query : 1 - 3,273 (3,273/3,273)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000901)
HIX0000901
HIT000350880 (
ENST00000369600
)
(Putative homeodomain transcription factor 1;)
genome : 114,239,827 - 114,302,059 (62,233)
query : 1 - 3,075 (3,075/3,075)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000901)
HIX0000901
HIT000350878 (
ENST00000369598
)
(Putative homeodomain transcription factor 1;)
genome : 114,239,827 - 114,301,960 (62,134)
query : 1 - 3,000 (3,000/3,000)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000901)
HIX0000901
HIT000244545
(
AJ011863
)
Representative transcript
(Putative homeodomain transcription factor 1;)
genome : 114,239,837 - 114,301,356 (61,520)
query : 1 - 2,805 (2,805/2,806)
18 exons
identity = 0.993
3'(0.969;1.000;1.000;0.994;1.000;1.000;0.993;
1.000;1.000;1.000;1.000;0.988;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR021980 : Transcription factor homeodomain, male germ-cell
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000901)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173672
Rattus
sp. (Rat) : AJ437403
Mus
sp. (Mouse) : AK131629
Bos
sp. (Cow) : BC123860
Gallus
sp. (Chicken) : CR390149
Danio
sp. (Zebrafish) : ENSDART00000080352
Oryzias
sp. (Medaka) : ENSORLT00000021146
Pongo
sp. (Orangutan) : ENSPPYT00000001217
Takifugu
sp. (Fugu) : SINFRUT00000162972
Pan
sp. (Chimpanzee) : XM_001154234
Monodelphis
sp. (Opossum) : XM_001381997
Equus
sp. (Horse) : XM_001499447
Canis
sp. (Dog) : XM_540239
HIX0200142
HIT000511346 (
ENST00000413412
)
(Ribosomal protein S5, C-terminal domain containing protein.)
genome : 114,241,506 - 114,242,253 (748)
query : 1 - 748 (748/748)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200142)
HIX0000901
HIT000585619 (
ENST00000481652
)
(Putative homeodomain transcription factor 1;)
genome : 114,242,497 - 114,248,603 (6,107)
query : 1 - 836 (836/836)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 5, E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000901)
HIX0000901
HIT000030900
(
BC002447
)
(Putative homeodomain transcription factor 1;)
genome : 114,246,448 - 114,302,098 (55,651)
query : 1 - 2,741 (2,741/2,760)
15 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991)5'
coverage = 1.000
InterPro :
IPR021980 : Transcription factor homeodomain, male germ-cell
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000901)
HIX0000901
HIT000311590 (
ENST00000357783
)
(Putative homeodomain transcription factor 1;)
genome : 114,246,445 - 114,302,098 (55,654)
query : 1 - 2,747 (2,747/2,747)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000901)
HIX0000901
HIT000085898
(
BC000842
)
(Putative homeodomain transcription factor 1;)
genome : 114,248,389 - 114,255,950 (7,562)
query : 1 - 1,061 (1,061/1,076)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9, plas 6, nucl 4, mito 4, pero 4, mito_pero 4,
mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000901)
HIX0000901
HIT000510604 (
ENST00000412670
)
(Putative homeodomain transcription factor 1;)
genome : 114,248,387 - 114,255,950 (7,564)
query : 1 - 1,063 (1,063/1,063)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9, plas 6, nucl 4, mito 4, pero 4, mito_pero 4,
mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000901)
HIX0000901
HIT000489373
(
AK294749
)
(Putative homeodomain transcription factor 1;)
genome : 114,248,696 - 114,301,503 (52,808)
query : 1 - 1,505 (1,505/1,505)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.8333, cyto 9.5, nucl 8, mito 8,
cyto_pero 6.83333, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000901)
HIX0000901
HIT000545598 (
ENST00000447664
)
(Putative homeodomain transcription factor 1;)
genome : 114,248,696 - 114,301,503 (52,808)
query : 1 - 1,505 (1,505/1,505)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.8333, cyto 9.5, nucl 8, mito 8,
cyto_pero 6.83333, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000901)
HIX0000901
HIT000576981 (
ENST00000472612
)
(Putative homeodomain transcription factor 1;)
genome : 114,267,957 - 114,280,890 (12,934)
query : 1 - 943 (943/943)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000901)
HIX0000901
HIT000590587 (
ENST00000486855
)
(Putative homeodomain transcription factor 1;)
genome : 114,268,291 - 114,281,408 (13,118)
query : 1 - 550 (550/550)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 23, nucl 4, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000901)
HIX0000901
HIT000544673 (
ENST00000446739
)
(Putative homeodomain transcription factor 1;)
genome : 114,280,748 - 114,301,780 (21,033)
query : 1 - 770 (770/770)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 14, nucl 11, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000901)
HIX0000901
HIT000596659 (
ENST00000493212
)
(Hypothetical short protein.)
genome : 114,292,144 - 114,302,111 (9,968)
query : 1 - 956 (956/956)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000901)
HIX0000902
HIT000023951
(
AL050064
)
(Hypothetical short protein.)
genome : 114,304,454 - 114,307,432 (2,979)
query : 1 - 2,975 (2,975/3,011)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000902)
HIX0000902
HIT000207176 (
NM_018364
)
(Round spermatid basic protein 1;)
genome : 114,304,454 - 114,355,070 (50,617)
query : 1 - 6,593 (6,593/6,604)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12.5, cyto 9, mito 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000902)
HIX0000902
HIT000107971 (
ENST00000261441
)
(Round spermatid basic protein 1;)
genome : 114,304,454 - 114,355,098 (50,645)
query : 1 - 6,621 (6,621/6,621)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12.5, cyto 9, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000902)
HIX0000902
HIT000040118
(
BC026155
)
Representative transcript
(Round spermatid basic protein 1.)
genome : 114,307,252 - 114,354,915 (47,664)
query : 6 - 3,763 (3,758/3,778)
8 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
InterPro :
IPR026306 : Round spermatid basic protein 1
GO :
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 7, E.R._mito 3, extr 2, mito 2, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000902)
HIX0000902
HIT000580606 (
ENST00000476412
)
(Round spermatid basic protein 1.)
genome : 114,307,252 - 114,354,915 (47,664)
query : 1 - 3,758 (3,758/3,772)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 8, extr 2, E.R._mito 2, mito 1.5,
E.R. 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000902)
HIX0000902
HIT000005440
(
AK022166
)
(Round spermatid basic protein 1.)
genome : 114,307,253 - 114,340,604 (33,352)
query : 1 - 2,996 (2,996/2,996)
6 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026306 : Round spermatid basic protein 1
GO :
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 17.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000902)
HIX0000902
HIT000306172
(
CR627402
)
(Round spermatid basic protein 1.)
genome : 114,307,963 - 114,354,664 (46,702)
query : 28 - 2,705 (2,678/2,720)
7 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.990
InterPro :
IPR026306 : Round spermatid basic protein 1
GO :
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 15.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000902)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK131629
Monodelphis
sp. (Opossum) : ENSMODT00000000908
Oryzias
sp. (Medaka) : ENSORLT00000013232
Pongo
sp. (Orangutan) : ENSPPYT00000001216
Tetraodon
sp. (Tetraodon) : GSTENT00034332001
Tetraodon
sp. (Tetraodon) : GSTENT00038523001
Takifugu
sp. (Fugu) : SINFRUT00000162038
Rattus
sp. (Rat) : XM_001065582
Gallus
sp. (Chicken) : XM_001235228
Equus
sp. (Horse) : XM_001917842
Canis
sp. (Dog) : XM_533011
Bos
sp. (Cow) : XM_867943
Pan
sp. (Chimpanzee) : XR_024253
HIX0000902
HIT000004556
(
AK002082
)
(Round spermatid basic protein 1.)
genome : 114,308,470 - 114,354,911 (46,442)
query : 3 - 2,420 (2,418/2,420)
7 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.998)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13.5, cyto 8.5, extr 4, E.R. 1.5,
E.R._mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000902)
HIX0000902
HIT000425349
(
AK292552
)
(Round spermatid basic protein 1;)
genome : 114,308,541 - 114,355,098 (46,558)
query : 1 - 2,534 (2,534/2,534)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR026306 : Round spermatid basic protein 1
GO :
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12.5, cyto 9, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000902)
HIX0000902
HIT000350861 (
ENST00000369581
)
(Round spermatid basic protein 1.)
genome : 114,308,767 - 114,310,656 (1,890)
query : 1 - 498 (498/498)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 8, cyto_nucl 8, mito_pero 8,
cyto_pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000902)
HIX0021262
HIT000003589
(
AK001115
)
Representative transcript
(Conserved hypothetical protein.)
genome : 114,336,321 - 114,338,265 (1,945)
query : 1 - 1,945 (1,945/1,945)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, extr 11, nucl 3, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021262)
HIX0159810
HIT000527332 (
ENST00000429398
)
(Conserved hypothetical protein.)
genome : 114,355,001 - 114,366,118 (11,118)
query : 1 - 773 (773/773)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159810)
HIX0159810
HIT000516172 (
ENST00000418238
)
(Non-protein coding transcript.)
genome : 114,355,230 - 114,358,098 (2,869)
query : 1 - 422 (422/422)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159810)
HIX0021256
HIT000204151 (
NM_012411
)
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,356,433 - 114,414,375 (57,943)
query : 1 - 3,483 (3,483/3,507)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.988;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000205752 (
NM_015967
)
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,356,433 - 114,414,375 (57,943)
query : 1 - 3,648 (3,648/3,672)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.988;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000655840 (
NM_001193431
)
(Tyrosine-protein phosphatase non-receptor type 22 isoform 3.)
genome : 114,356,433 - 114,414,375 (57,943)
query : 1 - 3,564 (3,564/3,588)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.988;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000038132
(
BC017785
)
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,356,441 - 114,414,334 (57,894)
query : 1 - 1,786 (1,786/1,817)
8 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
EC number :
EC 3.1.3.48
InterPro :
IPR000242 : Protein-tyrosine phosphatase, receptor/non-receptor type
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000264494
(
BC071670
)
Representative transcript
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,356,439 - 114,414,320 (57,882)
query : 1 - 3,422 (3,422/3,436)
19 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
0.988;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000242 : Protein-tyrosine phosphatase, receptor/non-receptor type
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK153812
Gallus
sp. (Chicken) : ENSGALT00000035110
Oryzias
sp. (Medaka) : ENSORLT00000017034
Pongo
sp. (Orangutan) : ENSPPYT00000001215
Tetraodon
sp. (Tetraodon) : GSTENT00034334001
Rattus
sp. (Rat) : XM_001068074
Macaca
sp. (Macaque) : XM_001110241
Monodelphis
sp. (Opossum) : XM_001381998
Equus
sp. (Horse) : XM_001917840
Pan
sp. (Chimpanzee) : XM_513663
Canis
sp. (Dog) : XM_540240
Bos
sp. (Cow) : XM_597200
HIX0021256
HIT000313266 (
ENST00000359785
)
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,356,433 - 114,414,381 (57,949)
query : 1 - 3,654 (3,654/3,654)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000565541 (
ENST00000460620
)
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,356,433 - 114,414,334 (57,902)
query : 1 - 1,794 (1,794/1,794)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000627594 (
ENST00000528414
)
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,356,437 - 114,414,320 (57,884)
query : 1 - 3,424 (3,424/3,424)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000061661
(
AF001846
)
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,356,930 - 114,414,286 (57,357)
query : 1 - 3,058 (3,058/3,058)
21 exons
identity = 0.995
3'(0.986;1.000;1.000;1.000;1.000;1.000;1.000;
0.988;1.000;1.000;1.000;1.000;0.957;1.000;
1.000;1.000;1.000;1.000;1.000;0.982;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000242 : Protein-tyrosine phosphatase, receptor/non-receptor type
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000066204
(
AF077031
)
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,357,120 - 114,414,317 (57,198)
query : 1 - 2,903 (2,903/2,903)
21 exons
identity = 0.998
3'(0.998;1.000;1.000;0.991;1.000;1.000;1.000;
1.000;0.999;1.000;1.000;1.000;1.000;1.000;
1.000;0.986;0.974;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000242 : Protein-tyrosine phosphatase, receptor/non-receptor type
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000001960
(
AF150732
)
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,357,120 - 114,414,315 (57,196)
query : 1 - 2,877 (2,877/2,877)
21 exons
identity = 0.976
3'(0.998;1.000;0.968;1.000;0.975;1.000;1.000;
0.965;0.929;0.987;1.000;1.000;1.000;0.979;
1.000;1.000;1.000;0.990;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000573613 (
ENST00000469077
)
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,357,286 - 114,362,454 (5,169)
query : 1 - 562 (562/562)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000497748
(
AK303124
)
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,357,301 - 114,414,330 (57,030)
query : 1 - 2,421 (2,421/2,421)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.988;0.999;1.000;1.000;1.000;1.000;1.000;
1.000;0.991;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000242 : Protein-tyrosine phosphatase, receptor/non-receptor type
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000631332 (
ENST00000532224
)
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,357,301 - 114,414,330 (57,030)
query : 1 - 2,421 (2,421/2,421)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000637298 (
ENST00000538253
)
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,357,301 - 114,414,323 (57,023)
query : 1 - 2,414 (2,414/2,414)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000648616
(
GU479452
)
(Tyrosine-protein phosphatase non-receptor type 22 isoform 3.)
genome : 114,357,482 - 114,414,295 (56,814)
query : 1 - 2,435 (2,435/2,435)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000242 : Protein-tyrosine phosphatase, receptor/non-receptor type
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000715936
(
JN084012
)
(Tyrosine-protein phosphatase non-receptor type 22 isoform 3.)
genome : 114,357,527 - 114,414,258 (56,732)
query : 1 - 2,365 (2,365/2,365)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.988;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000242 : Protein-tyrosine phosphatase, receptor/non-receptor type
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 15.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000429564
(
AK310698
)
(Tyrosine-protein phosphatase non-receptor type 22 isoform 3.)
genome : 114,361,921 - 114,414,334 (52,414)
query : 1 - 2,726 (2,726/2,726)
20 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.992;0.988;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.974;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000242 : Protein-tyrosine phosphatase, receptor/non-receptor type
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000518311 (
ENST00000420377
)
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,361,921 - 114,414,334 (52,414)
query : 1 - 2,726 (2,726/2,726)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 16, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000429436
(
AK310570
)
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,362,148 - 114,414,334 (52,187)
query : 1 - 2,118 (2,118/2,118)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.988;
0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000242 : Protein-tyrosine phosphatase, receptor/non-receptor type
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 14.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000625024 (
ENST00000525799
)
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,362,148 - 114,414,334 (52,187)
query : 1 - 2,118 (2,118/2,118)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 14.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0159810
HIT000546133 (
ENST00000448199
)
(Hypothetical short protein.)
genome : 114,366,035 - 114,371,793 (5,759)
query : 1 - 174 (174/174)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, nucl 6.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159810)
HIX0021256
HIT000061662
(
AF001847
)
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,375,554 - 114,414,286 (38,733)
query : 1 - 2,278 (2,278/2,356)
16 exons
identity = 0.995
3'(0.971;1.000;0.988;1.000;1.000;1.000;1.000;
0.957;1.000;1.000;1.000;1.000;1.000;1.000;
0.982;1.000)5'
coverage = 0.967
EC number :
EC 3.1.3.48
InterPro :
IPR000242 : Protein-tyrosine phosphatase, receptor/non-receptor type
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000588010 (
ENST00000484147
)
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,375,569 - 114,414,286 (38,718)
query : 1 - 2,258 (2,258/2,258)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000221081
(
U69700
)
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,397,114 - 114,399,063 (1,950)
query : 5 - 253 (249/253)
3 exons
identity = 0.992
3'(1.000;1.000;0.967)5'
coverage = 0.984
EC number :
EC 3.1.3.48
InterPro :
IPR000242 : Protein-tyrosine phosphatase, receptor/non-receptor type
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 7.5, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0023663
HIT000043072
(
AK123199
)
Representative transcript
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,399,257 - 114,443,859 (44,603)
query : 1 - 1,733 (1,733/1,733)
5 exons
identity = 0.999
5'(1.000;0.992;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 13, cyto 6.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023663)
HIX0023663
HIT000517470 (
ENST00000419536
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,399,257 - 114,443,859 (44,603)
query : 1 - 1,734 (1,734/1,734)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 13, cyto 6.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023663)
HIX0023663
HIT000660024 (
NR_037864
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,399,257 - 114,443,859 (44,603)
query : 1 - 1,734 (1,734/1,734)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 13, cyto 6.5, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023663)
HIX0021256
HIT000633575 (
ENST00000534519
)
(Tyrosine-protein phosphatase non-receptor type 22; EC=3.1.3.48; Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP; Lymphoid phosphatase; LyP; PEST-domain phosphatase; PEP;)
genome : 114,399,405 - 114,414,358 (14,954)
query : 1 - 565 (565/565)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 15, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0021256
HIT000628211 (
ENST00000529045
)
(Tyrosine-protein phosphatase non-receptor type 12; EC=3.1.3.48; MPTP-PEST; Protein-tyrosine phosphatase P19; P19-PTP;)
genome : 114,401,974 - 114,414,375 (12,402)
query : 1 - 511 (511/527)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.970
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021256)
HIX0199848
HIT000316763 (
NM_001010922
)
(Bcl-2-like protein 15.)
genome : 114,419,436 - 114,430,169 (10,734)
query : 1 - 4,973 (4,973/4,986)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 15, extr 5, nucl 4, mito 4, mito_nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199848)
HIX0199848
HIT000306410
(
CR749373
)
(Bcl-2-like protein 15.)
genome : 114,420,790 - 114,430,081 (9,292)
query : 4 - 4,045 (4,042/4,050)
2 exons
identity = 0.993
3'(0.992;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199848)
HIX0199848
HIT000350860 (
ENST00000369580
)
(Bcl-2-like protein 15.)
genome : 114,420,790 - 114,430,081 (9,292)
query : 1 - 4,041 (4,041/4,041)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199848)
HIX0199848
HIT000009515
(
AK026241
)
(Conserved hypothetical protein.)
genome : 114,421,218 - 114,423,510 (2,293)
query : 1 - 590 (590/606)
2 exons
identity = 0.995
3'(0.994;0.996)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199848)
HIX0199848
HIT000422236
(
AK289439
)
(Bcl-2-like protein 15.)
genome : 114,423,325 - 114,430,203 (6,879)
query : 1 - 1,118 (1,118/1,118)
4 exons
identity = 0.998
3'(0.998;0.996;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 15, extr 5, nucl 4, mito 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199848)
HIX0199848
HIT000476774 (
ENST00000393316
)
(Bcl-2-like protein 15.)
genome : 114,423,325 - 114,430,169 (6,845)
query : 1 - 1,084 (1,084/1,084)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 15, extr 5, nucl 4, mito 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199848)
HIX0199848
HIT000592099 (
ENST00000488450
)
(Bcl-2-like protein 15.)
genome : 114,423,637 - 114,429,927 (6,291)
query : 1 - 408 (408/408)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 11.5, cysk 8, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199848)
HIX0199848
HIT000389346
(
BC127719
)
(Bcl-2-like protein 15.)
genome : 114,423,676 - 114,430,030 (6,355)
query : 1 - 594 (594/596)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 15, extr 5, nucl 4, mito 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199848)
HIX0199848
HIT000389347
(
BC127720
)
(Bcl-2-like protein 15.)
genome : 114,423,676 - 114,430,030 (6,355)
query : 1 - 594 (594/596)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 15, extr 5, nucl 4, mito 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199848)
HIX0199848
HIT000390955
(
BC132904
)
(Bcl-2-like protein 15.)
genome : 114,423,676 - 114,430,059 (6,384)
query : 1 - 276 (276/276)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199848)
HIX0199848
HIT000390957
(
BC132906
)
(Bcl-2-like protein 15.)
genome : 114,423,676 - 114,430,059 (6,384)
query : 1 - 276 (276/276)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199848)
HIX0199848
HIT000476777 (
ENST00000393320
)
(Bcl-2-like protein 15.)
genome : 114,423,676 - 114,430,059 (6,384)
query : 1 - 276 (276/276)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199848)
HIX0199848
HIT000331747
(
AY265864
)
(Bcl-2-like protein 15.)
genome : 114,423,719 - 114,429,997 (6,279)
query : 1 - 171 (171/171)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199848)
HIX0199848
HIT000331744
(
AY265861
)
Representative transcript
(Bcl-2-like protein 15.)
genome : 114,424,386 - 114,429,997 (5,612)
query : 1 - 483 (483/492)
3 exons
identity = 0.994
3'(0.987;1.000;1.000)5'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 15, extr 5, nucl 4, mito 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199848)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC031477
Bos
sp. (Cow) : BC122810
Gallus
sp. (Chicken) : CR388427
Equus
sp. (Horse) : ENSECAT00000025841
Pongo
sp. (Orangutan) : ENSPPYT00000001214
Rattus
sp. (Rat) : XM_001065351
Macaca
sp. (Macaque) : XM_001110407
Monodelphis
sp. (Opossum) : XM_001380669
Monodelphis
sp. (Opossum) : XM_001381999
Canis
sp. (Dog) : XM_843157
HIX0199848
HIT000590237 (
ENST00000486485
)
(Bcl-2-like protein 15.)
genome : 114,424,386 - 114,429,997 (5,612)
query : 1 - 483 (483/483)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 15, extr 5, nucl 4, mito 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199848)
HIX0199848
HIT000331746
(
AY265863
)
(Bcl-2-like protein 15.)
genome : 114,424,543 - 114,429,997 (5,455)
query : 1 - 204 (204/204)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199848)
HIX0199848
HIT000331745
(
AY265862
)
(Bcl-2-like protein 15.)
genome : 114,429,158 - 114,429,997 (840)
query : 1 - 250 (250/267)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.936
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 7, mito 4, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199848)
HIX0199848
HIT000575707 (
ENST00000471267
)
(Bcl-2-like protein 15.)
genome : 114,429,158 - 114,429,997 (840)
query : 1 - 250 (250/267)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.936
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 7, mito 4, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199848)
HIX0000904
HIT000203183 (
NM_006594
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,437,370 - 114,447,741 (10,372)
query : 1 - 2,791 (2,791/2,791)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.6667, nucl 13.5, cyto 12.5,
cyto_plas 7.66667, cyto_mito 7.16667, mito_nucl 7.16667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000723397 (
NM_001253853
)
(AP-4 complex subunit beta-1 isoform 2.)
genome : 114,437,370 - 114,447,741 (10,372)
query : 1 - 2,663 (2,663/2,663)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000106981 (
ENST00000256658
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,437,370 - 114,447,692 (10,323)
query : 1 - 2,742 (2,742/2,742)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.6667, nucl 13.5, cyto 12.5,
cyto_plas 7.66667, cyto_mito 7.16667, mito_nucl 7.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000350849 (
ENST00000369569
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,437,370 - 114,447,620 (10,251)
query : 1 - 2,818 (2,818/2,818)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.6667, nucl 13.5, cyto 12.5,
cyto_plas 7.66667, cyto_mito 7.16667, mito_nucl 7.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000723396 (
NM_001253852
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,437,370 - 114,447,525 (10,156)
query : 1 - 2,723 (2,723/2,723)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.6667, nucl 13.5, cyto 12.5,
cyto_plas 7.66667, cyto_mito 7.16667, mito_nucl 7.16667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000350847 (
ENST00000369567
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,437,370 - 114,447,450 (10,081)
query : 1 - 2,144 (2,144/2,144)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.1667, nucl 14.5, cyto 12.5,
cyto_plas 7.83333, mito_nucl 7.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000036546
(
BC014146
)
Representative transcript
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,437,677 - 114,447,403 (9,727)
query : 1 - 2,294 (2,294/2,329)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002553 : Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR011989 : Armadillo-like helical
IPR012295 : Beta2-adaptin/TBP, C-terminal domain
IPR015151 : Beta-adaptin appendage, C-terminal subdomain
IPR026739 : AP complex subunit beta
GO :
0006886 : Biological Process : intracellular protein transport
0016192 : Biological Process : vesicle-mediated transport
0030117 : Cellular Component : membrane coat
0030131 : Cellular Component : clathrin adaptor complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.6667, nucl 13.5, cyto 12.5,
cyto_plas 7.66667, cyto_mito 7.16667, mito_nucl 7.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB172937
Gallus
sp. (Chicken) : AJ720521
Mus
sp. (Mouse) : BC031477
Bos
sp. (Cow) : BC149162
Danio
sp. (Zebrafish) : ENSDART00000105338
Monodelphis
sp. (Opossum) : ENSMODT00000000856
Oryzias
sp. (Medaka) : ENSORLT00000002604
Pongo
sp. (Orangutan) : ENSPPYT00000001213
Tetraodon
sp. (Tetraodon) : GSTENT00012386001
Takifugu
sp. (Fugu) : SINFRUT00000144012
Rattus
sp. (Rat) : XM_001065231
Pan
sp. (Chimpanzee) : XM_001153037
Equus
sp. (Horse) : XM_001499579
Canis
sp. (Dog) : XM_540241
HIX0000904
HIT000068345
(
AF092094
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,437,678 - 114,447,692 (10,015)
query : 1 - 2,432 (2,432/2,432)
11 exons
identity = 0.998
3'(1.000;1.000;0.995;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;0.977)5'
coverage = 1.000
InterPro :
IPR002553 : Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR011989 : Armadillo-like helical
IPR012295 : Beta2-adaptin/TBP, C-terminal domain
IPR015151 : Beta-adaptin appendage, C-terminal subdomain
IPR026739 : AP complex subunit beta
GO :
0006886 : Biological Process : intracellular protein transport
0016192 : Biological Process : vesicle-mediated transport
0030117 : Cellular Component : membrane coat
0030131 : Cellular Component : clathrin adaptor complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.6667, nucl 13.5, cyto 12.5,
cyto_plas 7.66667, cyto_mito 7.16667, mito_nucl 7.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000329752
(
AB209817
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,437,678 - 114,447,482 (9,805)
query : 1 - 2,372 (2,372/2,372)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002553 : Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR011989 : Armadillo-like helical
IPR012295 : Beta2-adaptin/TBP, C-terminal domain
IPR015151 : Beta-adaptin appendage, C-terminal subdomain
IPR026739 : AP complex subunit beta
GO :
0006886 : Biological Process : intracellular protein transport
0016192 : Biological Process : vesicle-mediated transport
0030117 : Cellular Component : membrane coat
0030131 : Cellular Component : clathrin adaptor complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.6667, nucl 13.5, cyto 12.5,
cyto_plas 7.66667, cyto_mito 7.16667, mito_nucl 7.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000003519
(
AK001045
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,437,678 - 114,442,867 (5,190)
query : 1 - 1,940 (1,940/1,940)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, extr 9, cyto_nucl 8, mito 4, nucl 3.5,
lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000583355 (
ENST00000479285
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,437,678 - 114,442,867 (5,190)
query : 1 - 1,940 (1,940/1,940)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, extr 9, cyto_nucl 8, mito 4, nucl 3.5,
lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000494828
(
AK300204
)
(AP-4 complex subunit beta-1 isoform 2.)
genome : 114,437,682 - 114,447,585 (9,904)
query : 1 - 2,195 (2,195/2,195)
11 exons
identity = 1.000
3'(1.000;0.996;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002553 : Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR011989 : Armadillo-like helical
IPR012295 : Beta2-adaptin/TBP, C-terminal domain
IPR015151 : Beta-adaptin appendage, C-terminal subdomain
IPR026739 : AP complex subunit beta
GO :
0006886 : Biological Process : intracellular protein transport
0016192 : Biological Process : vesicle-mediated transport
0030117 : Cellular Component : membrane coat
0030131 : Cellular Component : clathrin adaptor complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000014181
(
AK057567
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,437,682 - 114,440,561 (2,880)
query : 1 - 2,667 (2,667/2,667)
2 exons
identity = 0.997
3'(0.999;0.996)5'
coverage = 1.000
InterPro :
IPR002553 : Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR011989 : Armadillo-like helical
IPR026739 : AP complex subunit beta
GO :
0006886 : Biological Process : intracellular protein transport
0016192 : Biological Process : vesicle-mediated transport
0030117 : Cellular Component : membrane coat
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, extr 10, cyto_nucl 9, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000567419 (
ENST00000462591
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,437,682 - 114,440,561 (2,880)
query : 1 - 2,661 (2,661/2,661)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 12, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000018607
(
AK093740
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,437,686 - 114,447,450 (9,765)
query : 1 - 1,828 (1,828/1,828)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.996;1.000)5'
coverage = 1.000
InterPro :
IPR002553 : Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR011989 : Armadillo-like helical
IPR012295 : Beta2-adaptin/TBP, C-terminal domain
IPR015151 : Beta-adaptin appendage, C-terminal subdomain
IPR026739 : AP complex subunit beta
GO :
0006886 : Biological Process : intracellular protein transport
0016192 : Biological Process : vesicle-mediated transport
0030117 : Cellular Component : membrane coat
0030131 : Cellular Component : clathrin adaptor complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14.8333, cyto 10.5,
cyto_plas 6.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000433507
(
AK314641
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,437,687 - 114,447,650 (9,964)
query : 1 - 2,383 (2,383/2,383)
11 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;0.996;1.000;
1.000;1.000;1.000;0.989)5'
coverage = 1.000
InterPro :
IPR002553 : Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR011989 : Armadillo-like helical
IPR012295 : Beta2-adaptin/TBP, C-terminal domain
IPR015151 : Beta-adaptin appendage, C-terminal subdomain
IPR026739 : AP complex subunit beta
GO :
0006886 : Biological Process : intracellular protein transport
0016192 : Biological Process : vesicle-mediated transport
0030117 : Cellular Component : membrane coat
0030131 : Cellular Component : clathrin adaptor complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.6667, nucl 13.5, cyto 12.5,
cyto_plas 7.66667, cyto_mito 7.16667, mito_nucl 7.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000583846 (
ENST00000479801
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,438,667 - 114,440,597 (1,931)
query : 1 - 557 (557/557)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000588063 (
ENST00000484201
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,438,971 - 114,447,678 (8,708)
query : 1 - 981 (981/981)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 17.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000565571 (
ENST00000460653
)
(Non-protein coding transcript.)
genome : 114,441,750 - 114,442,630 (881)
query : 1 - 330 (330/330)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000350846 (
ENST00000369566
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,442,031 - 114,447,485 (5,455)
query : 1 - 1,476 (1,476/1,476)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 8.16667, cyto 7.5, mito 7.5,
mito_pero 6.83333, nucl 5, plas 4, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000492661
(
AK298037
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,442,031 - 114,447,485 (5,455)
query : 1 - 1,476 (1,476/1,476)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002553 : Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR011989 : Armadillo-like helical
IPR026739 : AP complex subunit beta
GO :
0006886 : Biological Process : intracellular protein transport
0016192 : Biological Process : vesicle-mediated transport
0030117 : Cellular Component : membrane coat
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 8.16667, cyto 7.5, mito 7.5,
mito_pero 6.83333, nucl 5, plas 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000350844 (
ENST00000369564
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,442,526 - 114,447,823 (5,298)
query : 1 - 1,225 (1,225/1,225)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, nucl 10, cyto_plas 8.5, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000593101 (
ENST00000489499
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,442,564 - 114,447,455 (4,892)
query : 1 - 1,044 (1,044/1,044)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 9, cyto 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000530349 (
ENST00000432415
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,442,610 - 114,447,642 (5,033)
query : 1 - 681 (681/681)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 13, nucl 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000592708 (
ENST00000489092
)
(AP-4 complex subunit beta-1 isoform 2.)
genome : 114,442,684 - 114,447,466 (4,783)
query : 1 - 955 (955/955)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000350851 (
ENST00000369571
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,442,853 - 114,447,659 (4,807)
query : 1 - 980 (980/980)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, nucl 10, cyto_plas 10, plas 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0000904
HIT000576515 (
ENST00000472122
)
(AP-4 complex subunit beta-1; AP-4 adapter complex subunit beta; Adapter-related protein complex 4 subunit beta-1; Beta subunit of AP-4; Beta4-adaptin;)
genome : 114,442,953 - 114,444,741 (1,789)
query : 1 - 583 (583/583)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 13, cyto 13, extr 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000904)
HIX0199824
HIT000350843 (
ENST00000369563
)
(5' exonuclease Apollo; EC=3.1.-.-; DNA cross-link repair 1B protein; SNM1 homolog B; SNMIB; hSNM1B;)
genome : 114,447,763 - 114,456,708 (8,946)
query : 1 - 3,940 (3,940/3,940)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, extr 6, mito 6, cyto 3, pero 3, extr_plas 3,
cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199824)
HIX0199824
HIT000208902 (
NM_022836
)
(5' exonuclease Apollo; EC=3.1.-.-; DNA cross-link repair 1B protein; SNM1 homolog B; SNMIB; hSNM1B;)
genome : 114,447,915 - 114,456,708 (8,794)
query : 1 - 3,788 (3,788/3,795)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, extr 6, mito 6, cyto 3, pero 3, extr_plas 3,
cyto_pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199824)
HIX0199824
HIT000076881
(
AF306693
)
(5' exonuclease Apollo.)
genome : 114,447,981 - 114,454,143 (6,163)
query : 2 - 1,157 (1,156/1,157)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.997)3'
coverage = 0.999
InterPro :
IPR001279 : Beta-lactamase-like
IPR011084 : DNA repair metallo-beta-lactamase
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 6.33333, cyto_pero 6.16667,
pero 5.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199824)
HIX0199824
HIT000306952
(
CR936679
)
(5' exonuclease Apollo.)
genome : 114,447,990 - 114,456,693 (8,704)
query : 1 - 3,532 (3,532/3,550)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001279 : Beta-lactamase-like
IPR011084 : DNA repair metallo-beta-lactamase
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199824)
HIX0199824
HIT000007334
(
AK024060
)
(5' exonuclease Apollo; EC=3.1.-.-; DNA cross-link repair 1B protein; SNM1 homolog B; SNMIB; hSNM1B;)
genome : 114,447,997 - 114,455,095 (7,099)
query : 1 - 2,093 (2,093/2,093)
4 exons
identity = 1.000
5'(1.000;0.994;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR001279 : Beta-lactamase-like
IPR011084 : DNA repair metallo-beta-lactamase
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, extr 6, mito 6, cyto 3, pero 3, extr_plas 3,
cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199824)
HIX0199824
HIT000076879
(
AF306691
)
(5' exonuclease Apollo.)
genome : 114,448,031 - 114,456,693 (8,663)
query : 1 - 3,198 (3,198/3,215)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001279 : Beta-lactamase-like
IPR011084 : DNA repair metallo-beta-lactamase
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 15.5, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199824)
HIX0199824
HIT000571131 (
ENST00000466480
)
(5' exonuclease Apollo.)
genome : 114,448,031 - 114,456,708 (8,678)
query : 1 - 3,213 (3,213/3,213)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 15.5, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199824)
HIX0199824
HIT000040859
(
BC029687
)
Representative transcript
(5' exonuclease Apollo; EC=3.1.-.-; DNA cross-link repair 1B protein; SNM1 homolog B; SNMIB; hSNM1B;)
genome : 114,448,038 - 114,456,693 (8,656)
query : 1 - 3,650 (3,650/3,664)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR001279 : Beta-lactamase-like
IPR011084 : DNA repair metallo-beta-lactamase
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, extr 6, mito 6, cyto 3, pero 3, extr_plas 3,
cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199824)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK137495
Gallus
sp. (Chicken) : AY376897
Rattus
sp. (Rat) : BC098939
Danio
sp. (Zebrafish) : BC124809
Equus
sp. (Horse) : ENSECAT00000023114
Oryzias
sp. (Medaka) : ENSORLT00000007986
Pongo
sp. (Orangutan) : ENSPPYT00000001212
Tetraodon
sp. (Tetraodon) : GSTENT00028165001
Takifugu
sp. (Fugu) : SINFRUT00000154322
Macaca
sp. (Macaque) : XM_001110949
Monodelphis
sp. (Opossum) : XM_001382002
Pan
sp. (Chimpanzee) : XM_524804
Bos
sp. (Cow) : XM_589521
Canis
sp. (Dog) : XM_843181
HIX0199824
HIT000006146
(
AK022872
)
(5' exonuclease Apollo.)
genome : 114,448,369 - 114,456,390 (8,022)
query : 1 - 3,016 (3,016/3,016)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001279 : Beta-lactamase-like
IPR011084 : DNA repair metallo-beta-lactamase
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 5.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199824)
HIX0199824
HIT000076880
(
AF306692
)
(5' exonuclease Apollo.)
genome : 114,449,760 - 114,456,706 (6,947)
query : 1 - 3,161 (3,161/3,183)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001279 : Beta-lactamase-like
IPR011084 : DNA repair metallo-beta-lactamase
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199824)
HIX0199824
HIT000087742
(
BC011950
)
(Hypothetical short protein.)
genome : 114,455,145 - 114,456,700 (1,556)
query : 1 - 1,556 (1,556/1,574)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199824)
HIX0199824
HIT000076878
(
AF306690
)
(Non-protein coding transcript.)
genome : 114,455,537 - 114,456,662 (1,126)
query : 1 - 1,126 (1,126/1,126)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199824)
HIX0028746
HIT000098883
(
BC048113
)
(Hypothetical short protein.)
genome : 114,466,623 - 114,471,854 (5,232)
query : 1 - 1,321 (1,321/1,335)
2 exons
identity = 0.999
3'(1.000;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 11, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028746)
HIX0028746
HIT000094364
(
BC036361
)
Representative transcript
(Conserved hypothetical protein.)
genome : 114,466,623 - 114,471,880 (5,258)
query : 1 - 2,118 (2,118/2,126)
5 exons
identity = 0.995
3'(1.000;1.000;0.990;1.000;0.998)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 9.5, cyto_nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028746)
HIX0028746
HIT000539005 (
ENST00000441071
)
(Conserved hypothetical protein.)
genome : 114,466,622 - 114,471,940 (5,319)
query : 1 - 571 (571/571)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 9, nucl 6.5, cyto_nucl 6.5, cyto 5.5,
extr_plas 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028746)
HIX0028746
HIT000548640 (
ENST00000450706
)
(Conserved hypothetical protein.)
genome : 114,466,623 - 114,471,880 (5,258)
query : 1 - 2,117 (2,117/2,117)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11, mito 9, nucl 4.5,
E.R._mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028746)
HIX0028746
HIT000525887 (
ENST00000427953
)
(Conserved hypothetical protein.)
genome : 114,466,623 - 114,471,854 (5,232)
query : 1 - 1,321 (1,321/1,321)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 11, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028746)
HIX0028746
HIT000524171 (
ENST00000426237
)
(Conserved hypothetical protein.)
genome : 114,470,257 - 114,472,114 (1,858)
query : 1 - 1,038 (1,038/1,038)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 5.5, cyto_nucl 4.5, mito 4, cyto 2.5,
mito_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028746)
HIX0000906
HIT000497350
(
AK302726
)
Representative transcript
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,471,814 - 114,516,270 (44,457)
query : 3 - 4,114 (4,112/4,114)
16 exons
identity = 0.997
5'(1.000;0.996;0.975;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;0.986;0.978;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 14.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF071070
Macaca
sp. (Macaque) : DQ147970
Rattus
sp. (Rat) : EF460311
Danio
sp. (Zebrafish) : ENSDART00000062343
Oryzias
sp. (Medaka) : ENSORLT00000020421
Pongo
sp. (Orangutan) : ENSPPYT00000001211
Tetraodon
sp. (Tetraodon) : GSTENT00003576001
Bos
sp. (Cow) : NM_001109998
Takifugu
sp. (Fugu) : SINFRUT00000170808
Pan
sp. (Chimpanzee) : XM_001151260
Monodelphis
sp. (Opossum) : XM_001382007
Equus
sp. (Horse) : XM_001499619
Gallus
sp. (Chicken) : XM_418007
Canis
sp. (Dog) : XM_850923
HIX0000906
HIT000524754 (
ENST00000426820
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,471,814 - 114,516,270 (44,457)
query : 1 - 4,112 (4,112/4,112)
16 exons
identity = 0.997
5'(1.000;0.997;0.975;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.986;0.978;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 14.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000319244 (
NM_198268
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,471,996 - 114,520,491 (48,496)
query : 1 - 8,151 (8,151/8,155)
16 exons
identity = 0.999
5'(1.000;0.997;0.975;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.986;0.978;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 13, mito 6, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000350834 (
ENST00000369554
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,471,996 - 114,520,422 (48,427)
query : 1 - 7,947 (7,947/7,947)
15 exons
identity = 0.998
5'(1.000;0.997;0.975;1.000;1.000;1.000;1.000;
1.000;1.000;0.986;0.978;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 13, mito 6, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000541561 (
ENST00000443627
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,471,996 - 114,520,422 (48,427)
query : 1 - 8,082 (8,082/8,082)
16 exons
identity = 0.999
5'(1.000;0.997;0.975;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.986;0.978;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 13, mito 6, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000041760
(
BC033012
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,471,996 - 114,514,694 (42,699)
query : 1 - 3,423 (3,423/3,438)
15 exons
identity = 0.996
5'(1.000;0.997;0.975;1.000;1.000;1.000;1.000;
1.000;0.992;0.993;0.986;0.978;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, cyto 9, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000213949 (
NM_152696
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,471,996 - 114,514,694 (42,699)
query : 1 - 3,423 (3,423/3,438)
15 exons
identity = 0.997
5'(1.000;0.997;0.975;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.986;0.978;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, cyto 9, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000350839 (
ENST00000369559
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,471,996 - 114,514,695 (42,700)
query : 1 - 3,424 (3,424/3,424)
15 exons
identity = 0.997
5'(1.000;0.997;0.975;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.986;0.978;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, cyto 9, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000042535
(
AK122662
)
(Homeodomain-interacting protein kinase 1 isoform 3 precursor.)
genome : 114,471,998 - 114,514,689 (42,692)
query : 1 - 3,416 (3,416/3,416)
15 exons
identity = 0.996
5'(1.000;0.995;0.975;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;0.986;0.978;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 16, cyto_nucl 13.5, cyto 9, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000350838 (
ENST00000369558
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,472,332 - 114,520,426 (48,095)
query : 1 - 8,157 (8,157/8,157)
16 exons
identity = 0.999
5'(1.000;0.997;0.975;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.986;0.978;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 13, mito 6, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000350835 (
ENST00000369555
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,472,332 - 114,516,503 (44,172)
query : 1 - 4,099 (4,099/4,099)
15 exons
identity = 0.997
5'(1.000;0.997;0.975;1.000;1.000;1.000;1.000;
1.000;1.000;0.986;0.978;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 13, mito 6, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000350841 (
ENST00000369561
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,472,377 - 114,516,193 (43,817)
query : 1 - 3,777 (3,777/3,777)
16 exons
identity = 0.997
5'(1.000;0.997;0.975;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.986;0.978;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 13, mito 6, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000061472
(
AB089957
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,472,439 - 114,516,588 (44,150)
query : 1 - 4,212 (4,212/4,224)
16 exons
identity = 0.997
5'(1.000;0.997;0.975;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.986;0.978;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 13, mito 6, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000614104 (
ENST00000514621
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,473,127 - 114,483,362 (10,236)
query : 1 - 574 (574/574)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, nucl 8.5, E.R._mito 8.5, mito_pero 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000604225 (
ENST00000503968
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,473,350 - 114,483,324 (9,975)
query : 1 - 570 (570/570)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 4.5, cyto_nucl 4.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000028702
(
AL833829
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,483,956 - 114,516,502 (32,547)
query : 1 - 3,051 (3,051/3,141)
15 exons
identity = 0.995
5'(0.977;0.975;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;0.986;0.973;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000040558
(
BC028408
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,493,767 - 114,516,502 (22,736)
query : 6 - 3,078 (3,073/3,102)
15 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;0.986;0.978;1.000;1.000;1.000;
0.999)3'
coverage = 0.998
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 16, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000319245 (
NM_198269
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,493,767 - 114,520,491 (26,725)
query : 1 - 7,062 (7,062/7,066)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.986;0.978;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 16, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000133110 (
ENST00000340480
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,493,767 - 114,520,426 (26,660)
query : 1 - 6,997 (6,997/6,997)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.986;0.978;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 16, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000318293 (
NM_181358
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,496,499 - 114,520,491 (23,993)
query : 1 - 6,871 (6,871/6,875)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.986;0.978;1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 15, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000051605
(
BC036057
)
(Homeodomain-interacting protein kinase 1 isoform 2.)
genome : 114,496,499 - 114,516,502 (20,004)
query : 1 - 2,882 (2,882/2,896)
14 exons
identity = 0.996
5'(1.000;1.000;1.000;0.995;1.000;1.000;0.992;
1.000;0.986;0.978;1.000;0.996;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 15, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000350833 (
ENST00000369553
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,496,499 - 114,516,503 (20,005)
query : 1 - 2,883 (2,883/2,883)
14 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.986;0.978;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 15, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000505559 (
ENST00000406344
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,497,248 - 114,520,422 (23,175)
query : 1 - 6,746 (6,746/6,746)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.986;0.978;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 15, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000314847 (
ENST00000361587
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,506,062 - 114,520,426 (14,365)
query : 1 - 5,766 (5,766/5,766)
7 exons
identity = 0.999
5'(1.000;0.986;0.978;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 13, extr 5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000000355
(
AB014530
)
(Homeodomain-interacting protein kinase 1; EC=2.7.11.1; Nuclear body-associated kinase 2;)
genome : 114,506,062 - 114,520,421 (14,360)
query : 1 - 5,761 (5,761/5,761)
7 exons
identity = 0.999
5'(1.000;0.986;0.978;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 13, extr 5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000259196
(
BC052493
)
(Conserved hypothetical protein.)
genome : 114,516,908 - 114,520,422 (3,515)
query : 2 - 3,515 (3,514/3,530)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 8, nucl 3, mito 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000906
HIT000093051
(
BC033339
)
(Conserved hypothetical protein.)
genome : 114,518,184 - 114,520,426 (2,243)
query : 1 - 2,245 (2,245/2,278)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 8, nucl 3, mito 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000906)
HIX0000907
HIT000252998
(
AY358954
)
(Olfactomedin-like protein 3; HNOEL-iso; hOLF44; Precursor;)
genome : 114,522,030 - 114,524,871 (2,842)
query : 1 - 1,810 (1,810/1,883)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 0.999
InterPro :
IPR003112 : Olfactomedin-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 5, cyto 3.5, cyto_nucl 3.5, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000907)
HIX0000907
HIT000207788 (
NM_020190
)
(Olfactomedin-like protein 3; HNOEL-iso; hOLF44; Precursor;)
genome : 114,522,030 - 114,524,875 (2,846)
query : 1 - 1,814 (1,814/1,852)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 5, cyto 3.5, cyto_nucl 3.5, lyso 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000907)
HIX0000907
HIT000254837
(
AY464015
)
Representative transcript
(Olfactomedin-like protein 3; HNOEL-iso; hOLF44; Precursor;)
genome : 114,522,048 - 114,524,875 (2,828)
query : 1 - 1,796 (1,796/1,823)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR003112 : Olfactomedin-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 5, cyto 3.5, cyto_nucl 3.5, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000907)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171276
Mus
sp. (Mouse) : AK131879
Rattus
sp. (Rat) : BC090350
Bos
sp. (Cow) : BC120075
Danio
sp. (Zebrafish) : BC124742
Gallus
sp. (Chicken) : BX934430
Monodelphis
sp. (Opossum) : ENSMODT00000000788
Oryzias
sp. (Medaka) : ENSORLT00000018743
Pongo
sp. (Orangutan) : ENSPPYT00000001210
Tetraodon
sp. (Tetraodon) : GSTENT00033830001
Takifugu
sp. (Fugu) : SINFRUT00000138010
Pan
sp. (Chimpanzee) : XM_001150857
Equus
sp. (Horse) : XM_001499686
Canis
sp. (Dog) : XM_540242
HIX0000907
HIT000350831 (
ENST00000369551
)
(Olfactomedin-like protein 3; Olfactomedin-noelin-tiarin factor 1; Precursor;)
genome : 114,522,063 - 114,524,876 (2,814)
query : 1 - 1,934 (1,934/1,934)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13, nucl 5.5, extr 4, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000907)
HIX0000907
HIT000017633
(
AK092766
)
(Olfactomedin-like protein 3; Olfactomedin-noelin-tiarin factor 1; Precursor;)
genome : 114,522,063 - 114,524,871 (2,809)
query : 1 - 1,929 (1,929/1,929)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR003112 : Olfactomedin-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13, nucl 5.5, extr 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000907)
HIX0000907
HIT000122385 (
ENST00000320334
)
(Olfactomedin-like protein 3; HNOEL-iso; hOLF44; Precursor;)
genome : 114,522,065 - 114,524,876 (2,812)
query : 1 - 1,780 (1,780/1,780)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 5, cyto 3.5, cyto_nucl 3.5, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000907)
HIX0000907
HIT000082404
(
AK075369
)
(Olfactomedin-like protein 3; HNOEL-iso; hOLF44; Precursor;)
genome : 114,522,065 - 114,524,871 (2,807)
query : 1 - 1,775 (1,775/1,775)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR003112 : Olfactomedin-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 5, cyto 3.5, cyto_nucl 3.5, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000907)
HIX0000907
HIT000492526
(
AK297902
)
(Olfactomedin-like protein 3 precursor.)
genome : 114,522,069 - 114,524,445 (2,377)
query : 1 - 1,237 (1,237/1,237)
3 exons
identity = 0.997
5'(0.959;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR003112 : Olfactomedin-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 11, nucl 4, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000907)
HIX0000907
HIT000002232
(
AF201945
)
(Olfactomedin-like protein 3; HNOEL-iso; hOLF44; Precursor;)
genome : 114,522,079 - 114,524,875 (2,797)
query : 1 - 1,765 (1,765/1,792)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 5, cyto 3.5, cyto_nucl 3.5, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000907)
HIX0000907
HIT000331001
(
AK223221
)
(Olfactomedin-like protein 3; HNOEL-iso; hOLF44; Precursor;)
genome : 114,522,087 - 114,524,872 (2,786)
query : 5 - 1,757 (1,753/1,782)
3 exons
identity = 0.999
5'(1.000;0.997;0.999)3'
coverage = 0.997
InterPro :
IPR003112 : Olfactomedin-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 5, lyso 4, cyto 3.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000907)
HIX0000907
HIT000034671
(
BC009920
)
(Olfactomedin-like protein 3; HNOEL-iso; hOLF44; Precursor;)
genome : 114,522,088 - 114,524,874 (2,787)
query : 1 - 1,755 (1,755/1,815)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR003112 : Olfactomedin-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 5, cyto 3.5, cyto_nucl 3.5, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000907)
HIX0000907
HIT000330251
(
AK222471
)
(Olfactomedin-like protein 3; HNOEL-iso; hOLF44; Precursor;)
genome : 114,522,096 - 114,524,871 (2,776)
query : 1 - 1,744 (1,744/1,760)
3 exons
identity = 0.998
5'(1.000;0.997;0.998)3'
coverage = 0.999
InterPro :
IPR003112 : Olfactomedin-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 5, cyto 3.5, cyto_nucl 3.5, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000907)
HIX0000907
HIT000082512
(
AK075479
)
(Olfactomedin-like protein 3; HNOEL-iso; hOLF44; Precursor;)
genome : 114,522,102 - 114,524,871 (2,770)
query : 3 - 1,740 (1,738/1,740)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 0.999
InterPro :
IPR003112 : Olfactomedin-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 5, cyto 3.5, cyto_nucl 3.5, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000907)
HIX0000907
HIT000082388
(
AK075353
)
(Olfactomedin-like protein 3; HNOEL-iso; hOLF44; Precursor;)
genome : 114,522,111 - 114,524,871 (2,761)
query : 1 - 1,729 (1,729/1,729)
3 exons
identity = 0.999
5'(1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR003112 : Olfactomedin-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 5, cyto 3.5, cyto_nucl 3.5, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000907)
HIX0000907
HIT000082577
(
AK075544
)
(Olfactomedin-like domain containing protein.)
genome : 114,522,113 - 114,524,876 (2,764)
query : 1 - 2,063 (2,063/2,063)
2 exons
identity = 0.998
5'(1.000;0.998)3'
coverage = 1.000
InterPro :
IPR003112 : Olfactomedin-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000907)
HIX0000907
HIT000595217 (
ENST00000491700
)
(Olfactomedin-like domain containing protein.)
genome : 114,522,113 - 114,524,876 (2,764)
query : 1 - 2,063 (2,063/2,063)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000907)
HIX0000907
HIT000476758 (
ENST00000393300
)
(Olfactomedin-like protein 3 precursor.)
genome : 114,522,695 - 114,524,871 (2,177)
query : 1 - 1,641 (1,641/1,641)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13, nucl 5.5, extr 4, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000907)
HIX0203552
HIT000444281_02
(
DQ577750
)
Representative transcript
(Non-protein coding transcript.)
genome : 114,564,587 - 114,564,616 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203552)
HIX0093900
HIT000395609
(
EF565120
)
Representative transcript
(Conserved hypothetical protein.)
genome : 114,576,581 - 114,577,105 (525)
query : 1 - 525 (525/536)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.979
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, cyto 10.5, cyto_plas 6, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0093900)
HIX0000908
HIT000724822 (
NM_001270805
)
(Synaptotagmin-6.)
genome : 114,631,914 - 114,696,472 (64,559)
query : 1 - 4,370 (4,370/4,375)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15.5, cyto 10.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000908)
HIX0000908
HIT000320117 (
NM_205848
)
(Synaptotagmin-6.)
genome : 114,631,914 - 114,695,062 (63,149)
query : 1 - 4,352 (4,352/4,357)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15.5, cyto 10.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000908)
HIX0000908
HIT000350827 (
ENST00000369547
)
(Synaptotagmin-6.)
genome : 114,631,914 - 114,696,472 (64,559)
query : 1 - 4,370 (4,370/4,370)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15.5, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000908)
HIX0000908
HIT000476754 (
ENST00000393296
)
(Synaptotagmin-6; Synaptotagmin VI; SytVI;)
genome : 114,631,914 - 114,696,472 (64,559)
query : 1 - 4,453 (4,453/4,453)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R._mito 8, plas 6.5, E.R. 5.5, extr_plas 5.5,
mito_pero 5.16667, mito 5, cyto 4, extr 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000908)
HIX0000908
HIT000013062
(
AK056448
)
(Synaptotagmin-6.)
genome : 114,633,133 - 114,695,062 (61,930)
query : 1 - 3,134 (3,134/3,134)
8 exons
identity = 0.998
3'(0.997;1.000;0.993;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
IPR001565 : Synaptotagmin
IPR028701 : Synaptotagmin-6
GO :
0005215 : Molecular Function : transporter activity
0005515 : Molecular Function : protein binding
0006810 : Biological Process : transport
0007340 : Biological Process : acrosome reaction
0008021 : Cellular Component : synaptic vesicle
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000908)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC065065
Rattus
sp. (Rat) : BC099185
Equus
sp. (Horse) : ENSECAT00000011020
Macaca
sp. (Macaque) : ENSMMUT00000013658
Monodelphis
sp. (Opossum) : ENSMODT00000000769
Oryzias
sp. (Medaka) : ENSORLT00000020111
Pongo
sp. (Orangutan) : ENSPPYT00000001209
Pan
sp. (Chimpanzee) : ENSPTRT00000002119
Tetraodon
sp. (Tetraodon) : GSTENT00023347001
Takifugu
sp. (Fugu) : SINFRUT00000142746
Danio
sp. (Zebrafish) : XM_001920428
Gallus
sp. (Chicken) : XM_425830
Canis
sp. (Dog) : XM_540243
Bos
sp. (Cow) : XM_617812
Danio
sp. (Zebrafish) : XM_686293
HIX0000908
HIT000350826 (
ENST00000369546
)
(Synaptotagmin-6.)
genome : 114,633,133 - 114,695,062 (61,930)
query : 1 - 3,133 (3,133/3,133)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15.5, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000908)
HIX0000908
HIT000021599
(
AK096744
)
(Synaptotagmin-6; Synaptotagmin VI; SytVI;)
genome : 114,633,133 - 114,641,823 (8,691)
query : 7 - 1,839 (1,833/1,839)
3 exons
identity = 0.997
3'(0.997;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR000008 : C2 domain
IPR028701 : Synaptotagmin-6
GO :
0005515 : Molecular Function : protein binding
0007340 : Biological Process : acrosome reaction
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14, nucl 4.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000908)
HIX0000908
HIT000587104 (
ENST00000483203
)
(Synaptotagmin-6; Synaptotagmin VI; SytVI;)
genome : 114,633,133 - 114,641,823 (8,691)
query : 1 - 1,831 (1,831/1,831)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, extr 6, nucl 5.5, cysk 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000908)
HIX0000908
HIT000052913
(
BC044948
)
Representative transcript
(Synaptotagmin-6.)
genome : 114,634,388 - 114,696,472 (62,085)
query : 1 - 1,896 (1,896/1,926)
8 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
IPR001565 : Synaptotagmin
IPR028701 : Synaptotagmin-6
GO :
0005215 : Molecular Function : transporter activity
0005515 : Molecular Function : protein binding
0006810 : Biological Process : transport
0007340 : Biological Process : acrosome reaction
0008021 : Cellular Component : synaptic vesicle
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000908)
HIX0000908
HIT000350825 (
ENST00000369545
)
(Synaptotagmin-6; Synaptotagmin VI; SytVI;)
genome : 114,636,383 - 114,696,541 (60,159)
query : 1 - 1,705 (1,705/1,705)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R._mito 8, plas 6.5, E.R. 5.5, extr_plas 5.5,
mito_pero 5.16667, mito 5, cyto 4, extr 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000908)
HIX0000908
HIT000522971 (
ENST00000425037
)
(Synaptotagmin-6.)
genome : 114,680,646 - 114,695,482 (14,837)
query : 1 - 391 (391/391)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 13, nucl 11, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000908)
HIX0000908
HIT000545915 (
ENST00000447981
)
(Synaptotagmin-6.)
genome : 114,682,236 - 114,695,602 (13,367)
query : 1 - 565 (565/565)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 13, cyto 11, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000908)
HIX0160449
HIT000518090 (
ENST00000420156
)
(Hypothetical short protein.)
genome : 114,749,049 - 114,804,900 (55,852)
query : 1 - 332 (332/332)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 8, cyto_nucl 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160449)
HIX0117179
HIT000465854
(
DQ599323
)
Representative transcript
(Non-protein coding transcript.)
genome : 114,906,985 - 114,907,014 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117179)
HIX0000910
HIT000024337
(
AL080216
)
(Hypothetical short protein.)
genome : 114,935,409 - 114,937,612 (2,204)
query : 1 - 2,204 (2,204/2,229)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 7, cyto 1.5, cyto_pero 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000910)
HIX0000910
HIT000205697 (
NM_015906
)
(E3 ubiquitin-protein ligase TRIM33; EC=6.3.2.-; Ectodermin homolog; RET-fused gene 7 protein; Protein Rfg7; Transcription intermediary factor 1-gamma; TIF1-gamma; Tripartite motif-containing protein 33;)
genome : 114,935,399 - 115,053,781 (118,383)
query : 1 - 8,339 (8,339/8,339)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000910)
HIX0000910
HIT000211081 (
NM_033020
)
(E3 ubiquitin-protein ligase TRIM33; EC=6.3.2.-; Ectodermin homolog; RET-fused gene 7 protein; Protein Rfg7; Transcription intermediary factor 1-gamma; TIF1-gamma; Tripartite motif-containing protein 33;)
genome : 114,935,399 - 115,053,781 (118,383)
query : 1 - 8,288 (8,288/8,288)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000910)
HIX0000910
HIT000312164 (
ENST00000358465
)
(E3 ubiquitin-protein ligase TRIM33; EC=6.3.2.-; Ectodermin homolog; RET-fused gene 7 protein; Protein Rfg7; Transcription intermediary factor 1-gamma; TIF1-gamma; Tripartite motif-containing protein 33;)
genome : 114,935,399 - 115,053,781 (118,383)
query : 1 - 8,339 (8,339/8,339)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000910)
HIX0000910
HIT000595720 (
ENST00000492227
)
(Conserved hypothetical protein.)
genome : 114,938,880 - 114,940,460 (1,581)
query : 1 - 355 (355/355)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto_nucl 5, nucl 4, cyto 4, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000910)
HIX0000910
HIT000006708
(
AK023434
)
(E3 ubiquitin-protein ligase TRIM33; EC=6.3.2.-; Ectodermin homolog; RET-fused gene 7 protein; Protein Rfg7; Transcription intermediary factor 1-gamma; TIF1-gamma; Tripartite motif-containing protein 33;)
genome : 114,940,230 - 115,005,861 (65,632)
query : 13 - 2,721 (2,709/2,724)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;1.000)5'
coverage = 0.994
EC number :
EC 6.3.2.-
InterPro :
IPR000315 : Zinc finger, B-box
IPR001487 : Bromodomain
IPR001965 : Zinc finger, PHD-type
IPR003649 : B-box, C-terminal
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000910)
HIX0000910
HIT000496621
(
AK301997
)
(E3 ubiquitin-protein ligase TRIM33; EC=6.3.2.-; Ectodermin homolog; RET-fused gene 7 protein; Protein Rfg7; Transcription intermediary factor 1-gamma; TIF1-gamma; Tripartite motif-containing protein 33;)
genome : 114,940,230 - 114,970,415 (30,186)
query : 1 - 2,186 (2,186/2,189)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
EC number :
EC 6.3.2.-
InterPro :
IPR001487 : Bromodomain
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000910)
HIX0000910
HIT000070192
(
AF119043
)
(E3 ubiquitin-protein ligase TRIM33; EC=6.3.2.-; Ectodermin homolog; RET-fused gene 7 protein; Protein Rfg7; Transcription intermediary factor 1-gamma; TIF1-gamma; Tripartite motif-containing protein 33;)
genome : 114,940,242 - 115,053,781 (113,540)
query : 2 - 3,497 (3,496/3,510)
20 exons
identity = 0.998
3'(0.992;1.000;0.987;1.000;1.000;0.997;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;1.000;1.000;1.000;0.998)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000315 : Zinc finger, B-box
IPR001487 : Bromodomain
IPR001965 : Zinc finger, PHD-type
IPR003649 : B-box, C-terminal
IPR011011 : Zinc finger, FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000910)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179127
Mus
sp. (Mouse) : AY458590
Danio
sp. (Zebrafish) : BC114245
Oryzias
sp. (Medaka) : ENSORLT00000000400
Pongo
sp. (Orangutan) : ENSPPYT00000001208
Takifugu
sp. (Fugu) : SINFRUT00000183391
Rattus
sp. (Rat) : XM_001064293
Monodelphis
sp. (Opossum) : XM_001382008
Equus
sp. (Horse) : XM_001495876
Gallus
sp. (Chicken) : XM_418009
Pan
sp. (Chimpanzee) : XM_513668
Canis
sp. (Dog) : XM_533013
Bos
sp. (Cow) : XM_612660
HIX0000910
HIT000074338
(
AF220136
)
Representative transcript
(E3 ubiquitin-protein ligase TRIM33; EC=6.3.2.-; Ectodermin homolog; RET-fused gene 7 protein; Protein Rfg7; Transcription intermediary factor 1-gamma; TIF1-gamma; Tripartite motif-containing protein 33;)
genome : 114,940,242 - 115,053,781 (113,540)
query : 2 - 3,496 (3,495/3,509)
20 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;1.000;0.997;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;1.000;1.000;1.000;0.998)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000315 : Zinc finger, B-box
IPR001487 : Bromodomain
IPR001965 : Zinc finger, PHD-type
IPR003649 : B-box, C-terminal
IPR011011 : Zinc finger, FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000910)
HIX0000910
HIT000074339
(
AF220137
)
(E3 ubiquitin-protein ligase TRIM33; EC=6.3.2.-; Ectodermin homolog; RET-fused gene 7 protein; Protein Rfg7; Transcription intermediary factor 1-gamma; TIF1-gamma; Tripartite motif-containing protein 33;)
genome : 114,940,242 - 115,053,781 (113,540)
query : 2 - 3,445 (3,444/3,458)
19 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;0.997;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;1.000;1.000;0.998)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000315 : Zinc finger, B-box
IPR001487 : Bromodomain
IPR001965 : Zinc finger, PHD-type
IPR003649 : B-box, C-terminal
IPR011011 : Zinc finger, FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000910)
HIX0000910
HIT000350823 (
ENST00000369543
)
(E3 ubiquitin-protein ligase TRIM33; EC=6.3.2.-; Ectodermin homolog; RET-fused gene 7 protein; Protein Rfg7; Transcription intermediary factor 1-gamma; TIF1-gamma; Tripartite motif-containing protein 33;)
genome : 114,940,242 - 115,053,781 (113,540)
query : 1 - 3,445 (3,445/3,457)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000910)
HIX0000910
HIT000545968 (
ENST00000448034
)
(E3 ubiquitin-protein ligase TRIM33; EC=6.3.2.-; Ectodermin homolog; RET-fused gene 7 protein; Protein Rfg7; Transcription intermediary factor 1-gamma; TIF1-gamma; Tripartite motif-containing protein 33;)
genome : 114,940,242 - 115,005,858 (65,617)
query : 1 - 2,694 (2,694/2,706)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 11.5, mito 10, cyto 5, E.R._mito 5,
mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000910)
HIX0000910
HIT000582151 (
ENST00000478032
)
(E3 ubiquitin-protein ligase TRIM33; EC=6.3.2.-; Ectodermin homolog; RET-fused gene 7 protein; Protein Rfg7; Transcription intermediary factor 1-gamma; TIF1-gamma; Tripartite motif-containing protein 33;)
genome : 114,940,242 - 114,942,231 (1,990)
query : 1 - 524 (524/536)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 16, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000910)
HIX0000910
HIT000000830
(
AB029036
)
(E3 ubiquitin-protein ligase TRIM33; EC=6.3.2.-; Ectodermin homolog; RET-fused gene 7 protein; Protein Rfg7; Transcription intermediary factor 1-gamma; TIF1-gamma; Tripartite motif-containing protein 33;)
genome : 114,940,243 - 115,053,710 (113,468)
query : 1 - 3,424 (3,424/3,424)
20 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.997;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000910)
HIX0000910
HIT000548283 (
ENST00000450349
)
(E3 ubiquitin-protein ligase TRIM33 isoform beta.)
genome : 114,940,243 - 115,005,861 (65,619)
query : 13 - 2,708 (2,696/2,708)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 11.5, mito 10, cyto 5, E.R._mito 5,
mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000910)
HIX0000910
HIT000014101
(
AK057487
)
(Tripartite motif-containing protein 66; Transcriptional intermediary factor 1 delta;)
genome : 114,940,256 - 114,970,426 (30,171)
query : 1 - 1,699 (1,699/1,699)
14 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;0.957;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;1.000;0.965)5'
coverage = 1.000
InterPro :
IPR001487 : Bromodomain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 13, cyto 6.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000910)
HIX0000910
HIT000244759
(
AJ132948
)
(E3 ubiquitin-protein ligase TRIM33; EC=6.3.2.-; Ectodermin homolog; RET-fused gene 7 protein; Protein Rfg7; Transcription intermediary factor 1-gamma; TIF1-gamma; Tripartite motif-containing protein 33;)
genome : 114,940,270 - 115,053,472 (113,203)
query : 1 - 3,159 (3,159/3,159)
20 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000;1.000;1.000;0.975;1.000;
0.991;1.000;1.000;1.000;1.000;0.993)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000315 : Zinc finger, B-box
IPR001487 : Bromodomain
IPR001965 : Zinc finger, PHD-type
IPR003649 : B-box, C-terminal
IPR011011 : Zinc finger, FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000910)
HIX0000910
HIT000004765
(
AK021491
)
(E3 ubiquitin-protein ligase TRIM33; EC=6.3.2.-; Ectodermin homolog; RET-fused gene 7 protein; Protein Rfg7; Transcription intermediary factor 1-gamma; TIF1-gamma; Tripartite motif-containing protein 33;)
genome : 114,946,948 - 114,949,589 (2,642)
query : 1 - 1,460 (1,460/1,460)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 11, cyto_nucl 9, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000910)
HIX0000910
HIT000581079 (
ENST00000476908
)
(E3 ubiquitin-protein ligase TRIM33; EC=6.3.2.-; Ectodermin homolog; RET-fused gene 7 protein; Protein Rfg7; Transcription intermediary factor 1-gamma; TIF1-gamma; Tripartite motif-containing protein 33;)
genome : 114,946,948 - 114,949,589 (2,642)
query : 1 - 1,461 (1,461/1,461)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11.5, cyto_nucl 10, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000910)
HIX0000910
HIT000328579
(
AB075517
)
(Tripartite motif-containing protein 66.)
genome : 114,947,445 - 114,952,242 (4,798)
query : 1 - 3,222 (3,222/3,222)
2 exons
identity = 0.998
3'(0.999;0.998)5'
coverage = 1.000
InterPro :
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 8, nucl 4.5, cyto_nucl 4.16667,
cyto_pero 2.83333, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000910)
HIX0160680
HIT000525343 (
ENST00000427409
)
(Ribosomal protein L2 domain 2 containing protein.)
genome : 115,002,556 - 115,002,982 (427)
query : 1 - 427 (427/427)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, nucl 11.5, cyto 10.5, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160680)
HIX0161554
HIT000555569 (
ENST00000457635
)
(Conserved hypothetical protein.)
genome : 115,010,937 - 115,011,904 (968)
query : 1 - 968 (968/968)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12, nucl 9.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161554)
HIX0178397
HIT000553738 (
ENST00000455804
)
(Pyruvate kinase family protein.)
genome : 115,078,616 - 115,080,461 (1,846)
query : 1 - 1,523 (1,523/1,523)
2 exons
identity = 0.997
5'(1.000;0.928)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11, mito 4, nucl 3, pero 3, extr 2,
cysk 2, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178397)
HIX0000912
HIT000039672
(
BC022880
)
(Pre-mRNA-splicing factor SPF27; Breast carcinoma-amplified sequence 2; DNA amplified in mammary carcinoma 1 protein; Spliceosome-associated protein SPF 27;)
genome : 115,110,182 - 115,124,241 (14,060)
query : 7 - 1,282 (1,276/1,323)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR008409 : Pre-mRNA-splicing factor SPF27
GO :
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000912)
HIX0000912
HIT000095560
(
BC039238
)
(Pre-mRNA-splicing factor SPF27; Breast carcinoma-amplified sequence 2; DNA amplified in mammary carcinoma 1 protein; Spliceosome-associated protein SPF 27;)
genome : 115,110,180 - 115,124,236 (14,057)
query : 1 - 1,273 (1,273/1,303)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR008409 : Pre-mRNA-splicing factor SPF27
GO :
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000912)
HIX0000912
HIT000032346
(
BC005285
)
(Pre-mRNA-splicing factor SPF27; Breast carcinoma-amplified sequence 2; DNA amplified in mammary carcinoma 1 protein; Spliceosome-associated protein SPF 27;)
genome : 115,110,185 - 115,124,234 (14,050)
query : 1 - 1,266 (1,266/1,296)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR008409 : Pre-mRNA-splicing factor SPF27
GO :
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000912)
HIX0000912
HIT000035910
(
BC012623
)
(Pre-mRNA-splicing factor SPF27; Breast carcinoma-amplified sequence 2; DNA amplified in mammary carcinoma 1 protein; Spliceosome-associated protein SPF 27;)
genome : 115,110,190 - 115,124,234 (14,045)
query : 5 - 1,265 (1,261/1,291)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.996
InterPro :
IPR008409 : Pre-mRNA-splicing factor SPF27
GO :
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000912)
HIX0000912
HIT000330417
(
AK222637
)
(Pre-mRNA-splicing factor SPF27; Breast carcinoma-amplified sequence 2; DNA amplified in mammary carcinoma 1 protein; Spliceosome-associated protein SPF 27;)
genome : 115,110,182 - 115,124,241 (14,060)
query : 2 - 1,277 (1,276/1,294)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR008409 : Pre-mRNA-splicing factor SPF27
GO :
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000912)
HIX0000912
HIT000202523 (
NM_005872
)
(Pre-mRNA-splicing factor SPF27; Breast carcinoma-amplified sequence 2; DNA amplified in mammary carcinoma 1 protein; Spliceosome-associated protein SPF 27;)
genome : 115,110,182 - 115,124,265 (14,084)
query : 1 - 1,300 (1,300/1,310)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, cysk 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000912)
HIX0000912
HIT000350821 (
ENST00000369541
)
(Pre-mRNA-splicing factor SPF27; Breast carcinoma-amplified sequence 2; DNA amplified in mammary carcinoma 1 protein; Spliceosome-associated protein SPF 27;)
genome : 115,110,178 - 115,124,260 (14,083)
query : 1 - 1,299 (1,299/1,299)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, cysk 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000912)
HIX0000912
HIT000058639
(
AB020623
)
Representative transcript
(Pre-mRNA-splicing factor SPF27; Breast carcinoma-amplified sequence 2; DNA amplified in mammary carcinoma 1 protein; Spliceosome-associated protein SPF 27;)
genome : 115,110,185 - 115,124,260 (14,076)
query : 1 - 1,292 (1,292/1,292)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008409 : Pre-mRNA-splicing factor SPF27
GO :
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000912)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK153513
Danio
sp. (Zebrafish) : BC085427
Bos
sp. (Cow) : BC102652
Gallus
sp. (Chicken) : BX935624
Pongo
sp. (Orangutan) : CR858884
Monodelphis
sp. (Opossum) : ENSMODT00000000450
Oryzias
sp. (Medaka) : ENSORLT00000000354
Tetraodon
sp. (Tetraodon) : GSTENT00009993001
Takifugu
sp. (Fugu) : SINFRUT00000180235
Rattus
sp. (Rat) : XM_001064236
Equus
sp. (Horse) : XM_001499911
Pan
sp. (Chimpanzee) : XM_513670
Canis
sp. (Dog) : XM_533014
HIX0000912
HIT000588845 (
ENST00000485021
)
(Pre-mRNA-splicing factor SPF27.)
genome : 115,110,505 - 115,124,250 (13,746)
query : 1 - 891 (891/891)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, pero 4, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000912)
HIX0000912
HIT000432007
(
AK313141
)
(Pre-mRNA-splicing factor SPF27; Breast carcinoma-amplified sequence 2; DNA amplified in mammary carcinoma 1 protein; Spliceosome-associated protein SPF 27;)
genome : 115,110,751 - 115,124,241 (13,491)
query : 5 - 711 (707/711)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.994
InterPro :
IPR008409 : Pre-mRNA-splicing factor SPF27
GO :
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000912)
HIX0000912
HIT000066490
(
AF081788
)
(Pre-mRNA-splicing factor SPF27; Breast carcinoma-amplified sequence 2; DNA amplified in mammary carcinoma 1 protein; Spliceosome-associated protein SPF 27;)
genome : 115,110,751 - 115,124,212 (13,462)
query : 1 - 678 (678/678)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008409 : Pre-mRNA-splicing factor SPF27
GO :
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000912)
HIX0000912
HIT000266474
(
BT019390
)
(Pre-mRNA-splicing factor SPF27; Breast carcinoma-amplified sequence 2; DNA amplified in mammary carcinoma 1 protein; Spliceosome-associated protein SPF 27;)
genome : 115,110,753 - 115,124,212 (13,460)
query : 1 - 676 (676/678)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR008409 : Pre-mRNA-splicing factor SPF27
GO :
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000912)
HIX0000912
HIT000268906
(
CR542037
)
(Pre-mRNA-splicing factor SPF27; Breast carcinoma-amplified sequence 2; DNA amplified in mammary carcinoma 1 protein; Spliceosome-associated protein SPF 27;)
genome : 115,110,751 - 115,124,212 (13,462)
query : 1 - 678 (678/678)
7 exons
identity = 0.997
3'(1.000;1.000;1.000;0.994;1.000;1.000;0.989)5'
coverage = 1.000
InterPro :
IPR008409 : Pre-mRNA-splicing factor SPF27
GO :
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000912)
HIX0000912
HIT000487458
(
AB451245
)
(Pre-mRNA-splicing factor SPF27; Breast carcinoma-amplified sequence 2; DNA amplified in mammary carcinoma 1 protein; Spliceosome-associated protein SPF 27;)
genome : 115,110,753 - 115,124,212 (13,460)
query : 1 - 676 (676/678)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.989;1.000)5'
coverage = 0.997
InterPro :
IPR008409 : Pre-mRNA-splicing factor SPF27
GO :
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000912)
HIX0000912
HIT000487582
(
AB451369
)
(Pre-mRNA-splicing factor SPF27; Breast carcinoma-amplified sequence 2; DNA amplified in mammary carcinoma 1 protein; Spliceosome-associated protein SPF 27;)
genome : 115,110,754 - 115,124,212 (13,459)
query : 1 - 675 (675/675)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.989;1.000)5'
coverage = 1.000
InterPro :
IPR008409 : Pre-mRNA-splicing factor SPF27
GO :
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000912)
HIX0077409
HIT000056597
(
BX647950
)
(DENN domain-containing protein 2C;)
genome : 115,125,469 - 115,212,732 (87,264)
query : 2 - 4,687 (4,686/4,745)
19 exons
identity = 0.998
3'(0.999;0.993;1.000;1.000;1.000;0.976;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.990;1.000;1.000;0.999;1.000)5'
coverage = 1.000
InterPro :
IPR001194 : DENN domain
IPR005112 : dDENN domain
IPR005113 : uDENN domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 14, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077409)
HIX0077409
HIT000306583
(
CR749576
)
Representative transcript
(DENN domain-containing protein 2C;)
genome : 115,125,471 - 115,212,655 (87,185)
query : 2 - 5,147 (5,146/5,163)
22 exons
identity = 0.997
3'(0.999;0.992;1.000;1.000;1.000;0.976;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;0.999;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001194 : DENN domain
IPR005112 : dDENN domain
IPR005113 : uDENN domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 14, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077409)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC060666
Equus
sp. (Horse) : ENSECAT00000020991
Oryzias
sp. (Medaka) : ENSORLT00000000776
Pongo
sp. (Orangutan) : ENSPPYT00000001206
Rattus
sp. (Rat) : ENSRNOT00000025365
Monodelphis
sp. (Opossum) : XM_001373068
Danio
sp. (Zebrafish) : XM_001919051
Pan
sp. (Chimpanzee) : XM_524806
Canis
sp. (Dog) : XM_540246
Bos
sp. (Cow) : XM_600557
Macaca
sp. (Macaque) : XR_012309
HIX0077409
HIT000476734 (
ENST00000393276
)
(DENN domain-containing protein 2C;)
genome : 115,125,469 - 115,212,732 (87,264)
query : 1 - 5,701 (5,701/5,701)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 14, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077409)
HIX0077409
HIT000476732 (
ENST00000393274
)
(DENN domain-containing protein 2C;)
genome : 115,125,471 - 115,212,656 (87,186)
query : 1 - 6,163 (6,163/6,163)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 14, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077409)
HIX0077409
HIT000044160
(
AK124287
)
(DENN domain-containing protein 2C;)
genome : 115,125,472 - 115,131,178 (5,707)
query : 1 - 2,214 (2,214/2,214)
5 exons
identity = 0.999
3'(1.000;0.998;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005112 : dDENN domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 11, cyto 8, extr 7, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077409)
HIX0077409
HIT000598410 (
ENST00000495031
)
(DENN domain-containing protein 2C;)
genome : 115,125,472 - 115,131,178 (5,707)
query : 1 - 2,214 (2,214/2,214)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 11, cyto 8, extr 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077409)
HIX0077409
HIT000319343 (
NM_198459
)
(DENN domain-containing protein 2C;)
genome : 115,127,196 - 115,212,732 (85,537)
query : 1 - 3,974 (3,974/3,974)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 14, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077409)
HIX0077409
HIT000723644 (
NM_001256404
)
(DENN domain-containing protein 2C;)
genome : 115,127,196 - 115,212,732 (85,537)
query : 1 - 4,514 (4,514/4,514)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 14, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077409)
HIX0077409
HIT000476735 (
ENST00000393277
)
(DENN domain-containing protein 2C;)
genome : 115,128,221 - 115,212,732 (84,512)
query : 1 - 2,784 (2,784/2,784)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 14, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077409)
HIX0077409
HIT000057722
(
BX649075
)
(DENN domain-containing protein 2A.)
genome : 115,129,357 - 115,167,946 (38,590)
query : 1 - 2,992 (2,992/3,011)
18 exons
identity = 0.998
3'(0.997;0.996;1.000;0.997;1.000;1.000;1.000;
1.000;1.000;1.000;0.991;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001194 : DENN domain
IPR005113 : uDENN domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 6, nucl 5.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077409)
HIX0077409
HIT000585850 (
ENST00000481894
)
(DENN domain-containing protein 2A.)
genome : 115,129,357 - 115,167,946 (38,590)
query : 1 - 2,990 (2,990/2,990)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 6, nucl 5.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077409)
HIX0203779
HIT000599244 (
ENST00000495896
)
(Conserved hypothetical protein.)
genome : 115,142,862 - 115,143,742 (881)
query : 1 - 427 (427/427)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203779)
HIX0077409
HIT000427168
(
AK308302
)
(DENN domain-containing protein 2C;)
genome : 115,151,416 - 115,213,022 (61,607)
query : 1 - 1,801 (1,801/1,801)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.991;1.000;0.999;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 13, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077409)
HIX0023801
HIT000049106
(
AK129835
)
Representative transcript
(Hypothetical protein.)
genome : 115,161,932 - 115,163,687 (1,756)
query : 1 - 1,757 (1,757/1,757)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, cyto 10.5, cyto_nucl 6.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023801)
HIX0077409
HIT000019273
(
AK094418
)
(DENN domain-containing protein 2C;)
genome : 115,167,261 - 115,168,986 (1,726)
query : 1 - 1,726 (1,726/1,726)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 10.5, mito 9, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077409)
HIX0077409
HIT000596984 (
ENST00000493549
)
(DENN domain-containing protein 2C;)
genome : 115,168,319 - 115,213,043 (44,725)
query : 1 - 673 (673/673)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 10, nucl 4.5, cyto_nucl 4, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077409)
HIX0199913
HIT000197088 (
NM_000036
)
(AMP deaminase 1; EC=3.5.4.6; AMP deaminase isoform M; Myoadenylate deaminase;)
genome : 115,215,721 - 115,238,239 (22,519)
query : 1 - 2,405 (2,405/2,426)
15 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.962)5'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 10, pero 6, E.R. 3.5, E.R._golg 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199913)
HIX0199913
HIT000654941 (
NM_001172626
)
(AMP deaminase 1; EC=3.5.4.6; AMP deaminase isoform M; Myoadenylate deaminase;)
genome : 115,215,721 - 115,238,239 (22,519)
query : 1 - 2,393 (2,393/2,414)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 9, pero 6, E.R. 3.5, cyto_nucl 2.5,
E.R._golg 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199913)
HIX0199913
HIT000619456 (
ENST00000520113
)
(AMP deaminase 1; EC=3.5.4.6; AMP deaminase isoform M; Myoadenylate deaminase;)
genome : 115,215,719 - 115,238,207 (22,489)
query : 1 - 2,375 (2,375/2,375)
15 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.954)5'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 10, pero 6, E.R. 3.5, E.R._golg 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199913)
HIX0199913
HIT000021932
(
AK097077
)
Representative transcript
(AMP deaminase 1; EC=3.5.4.6; AMP deaminase isoform M; Myoadenylate deaminase;)
genome : 115,215,722 - 115,238,239 (22,518)
query : 1 - 2,391 (2,391/2,391)
15 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;0.992;1.000;0.994;1.000;0.994;
1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001365 : Adenosine/AMP deaminase domain
IPR006329 : AMP deaminase
IPR006650 : Adenosine/AMP deaminase active site
GO :
0003876 : Molecular Function : AMP deaminase activity
0006188 : Biological Process : IMP biosynthetic process
0009168 : Biological Process : purine ribonucleoside monophosphate biosynthetic process
0019239 : Molecular Function : deaminase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 10, pero 6, E.R. 2.5, cyto_nucl 2.5,
nucl 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199913)
HIX0199913
HIT000350818 (
ENST00000369538
)
(AMP deaminase 1; EC=3.5.4.6; AMP deaminase isoform M; Myoadenylate deaminase;)
genome : 115,215,722 - 115,238,239 (22,518)
query : 1 - 2,392 (2,392/2,392)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 9, pero 6, E.R. 3.5, cyto_nucl 2.5,
E.R._golg 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199913)
HIX0199913
HIT000195920
(
M60092
)
(AMP deaminase 1; EC=3.5.4.6; AMP deaminase isoform M; Myoadenylate deaminase;)
genome : 115,215,722 - 115,238,176 (22,455)
query : 1 - 2,341 (2,341/2,341)
15 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.942)5'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001365 : Adenosine/AMP deaminase domain
IPR006329 : AMP deaminase
IPR006650 : Adenosine/AMP deaminase active site
GO :
0003876 : Molecular Function : AMP deaminase activity
0006188 : Biological Process : IMP biosynthetic process
0009168 : Biological Process : purine ribonucleoside monophosphate biosynthetic process
0019239 : Molecular Function : deaminase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, E.R. 6.5, E.R._golg 4, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199913)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK132524
Danio
sp. (Zebrafish) : BC044154
Danio
sp. (Zebrafish) : BC063996
Bos
sp. (Cow) : BC149228
Tetraodon
sp. (Tetraodon) : CR657617
Monodelphis
sp. (Opossum) : ENSMODT00000005762
Oryzias
sp. (Medaka) : ENSORLT00000000811
Pongo
sp. (Orangutan) : ENSPPYT00000001203
Rattus
sp. (Rat) : J02811
Takifugu
sp. (Fugu) : SINFRUT00000139156
Macaca
sp. (Macaque) : XM_001111578
Pan
sp. (Chimpanzee) : XM_001149901
Equus
sp. (Horse) : XM_001917779
Canis
sp. (Dog) : XM_540247
Gallus
sp. (Chicken) : XR_026741
HIX0199913
HIT000424146
(
AK291349
)
(AMP deaminase 1; EC=3.5.4.6; AMP deaminase isoform M; Myoadenylate deaminase;)
genome : 115,215,722 - 115,238,143 (22,422)
query : 1 - 2,308 (2,308/2,308)
15 exons
identity = 0.995
3'(1.000;1.000;0.994;1.000;1.000;1.000;0.994;
1.000;1.000;0.992;0.995;1.000;1.000;1.000;
0.920)5'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001365 : Adenosine/AMP deaminase domain
IPR006329 : AMP deaminase
IPR006650 : Adenosine/AMP deaminase active site
GO :
0003876 : Molecular Function : AMP deaminase activity
0006188 : Biological Process : IMP biosynthetic process
0009168 : Biological Process : purine ribonucleoside monophosphate biosynthetic process
0019239 : Molecular Function : deaminase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11.1667, nucl 9.5,
cyto_pero 7.33333, E.R._mito 4, extr 3, mito 2.5, E.R. 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199913)
HIX0199913
HIT000308466 (
ENST00000353928
)
(AMP deaminase 1; EC=3.5.4.6; AMP deaminase isoform M; Myoadenylate deaminase;)
genome : 115,215,735 - 115,238,239 (22,505)
query : 1 - 2,391 (2,391/2,391)
15 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.962)5'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 10, pero 6, E.R. 3.5, E.R._golg 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199913)
HIX0199913
HIT000433118
(
AK314252
)
(AMP deaminase 1; EC=3.5.4.6; AMP deaminase isoform M; Myoadenylate deaminase;)
genome : 115,215,735 - 115,238,149 (22,415)
query : 1 - 2,301 (2,301/2,301)
15 exons
identity = 0.996
3'(1.000;1.000;1.000;0.992;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.925)5'
coverage = 1.000
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001365 : Adenosine/AMP deaminase domain
IPR006329 : AMP deaminase
IPR006650 : Adenosine/AMP deaminase active site
GO :
0003876 : Molecular Function : AMP deaminase activity
0006188 : Biological Process : IMP biosynthetic process
0009168 : Biological Process : purine ribonucleoside monophosphate biosynthetic process
0019239 : Molecular Function : deaminase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 6, cyto 5, cyto_nucl 3.83333,
cyto_pero 3.33333, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199913)
HIX0199913
HIT000259574
(
BC056678
)
(AMP deaminase 1; EC=3.5.4.6; AMP deaminase isoform M; Myoadenylate deaminase;)
genome : 115,221,033 - 115,238,164 (17,132)
query : 5 - 1,089 (1,085/1,113)
7 exons
identity = 0.990
3'(0.974;1.000;1.000;1.000;1.000;1.000;0.926)5'
coverage = 0.975
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001365 : Adenosine/AMP deaminase domain
IPR006329 : AMP deaminase
GO :
0003876 : Molecular Function : AMP deaminase activity
0006188 : Biological Process : IMP biosynthetic process
0019239 : Molecular Function : deaminase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 9.5, cyto_mito 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199913)
HIX0199913
HIT000589362 (
ENST00000485564
)
(AMP deaminase 1; EC=3.5.4.6; AMP deaminase isoform M; Myoadenylate deaminase;)
genome : 115,226,816 - 115,229,622 (2,807)
query : 11 - 436 (426/453)
2 exons
identity = 0.998
3'(0.994;1.000)5'
coverage = 0.940
EC number :
EC 3.5.4.6
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12, nucl 8.5, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199913)
HIX0213813
HIT000088047
(
BC013214
)
(Conserved hypothetical protein.)
genome : 115,247,095 - 115,249,141 (2,047)
query : 1 - 2,047 (2,047/2,076)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213813)
HIX0213813
HIT000332855
(
AY941100
)
(Hypothetical short protein.)
genome : 115,247,097 - 115,248,500 (1,404)
query : 1 - 1,403 (1,403/1,431)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 10, cyto_nucl 5.5, mito_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213813)
HIX0213813
HIT000199417 (
NM_002524
)
(Small GTPase superfamily protein.)
genome : 115,247,085 - 115,259,515 (12,431)
query : 1 - 4,454 (4,454/4,454)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213813)
HIX0213813
HIT000350815 (
ENST00000369535
)
(Small GTPase superfamily protein.)
genome : 115,247,090 - 115,259,515 (12,426)
query : 1 - 4,449 (4,449/4,449)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213813)
HIX0213813
HIT000332856
(
AY941101
)
(Conserved hypothetical protein.)
genome : 115,248,849 - 115,250,022 (1,174)
query : 1 - 1,174 (1,174/1,174)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 8, extr_plas 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213813)
HIX0213813
HIT000032298
(
BC005219
)
Representative transcript
(Small GTPase superfamily protein.)
genome : 115,249,574 - 115,259,382 (9,809)
query : 1 - 1,832 (1,832/1,862)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.990)5'
coverage = 0.999
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213813)
HIX0213813
HIT000080767
(
AF493919
)
(Small GTPase superfamily protein.)
genome : 115,251,156 - 115,258,781 (7,626)
query : 1 - 570 (570/570)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213813)
HIX0213813
HIT000266631
(
BT019734
)
(Small GTPase superfamily protein.)
genome : 115,251,157 - 115,258,781 (7,625)
query : 1 - 569 (569/570)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213813)
HIX0213813
HIT000266632
(
BT019735
)
(Small GTPase superfamily protein.)
genome : 115,251,157 - 115,258,781 (7,625)
query : 1 - 569 (569/570)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213813)
HIX0214214
HIT000587299 (
ENST00000483407
)
(SUZ-C domain containing protein.)
genome : 115,260,423 - 115,261,559 (1,137)
query : 1 - 741 (741/741)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 12.5, extr 10, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214214)
HIX0214028
HIT000586936 (
ENST00000483030
)
(Cold-shock protein, DNA-binding domain containing protein.)
genome : 115,262,837 - 115,268,969 (6,133)
query : 1 - 873 (873/873)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214028)
HIX0214028
HIT000629926 (
ENST00000530784
)
(Conserved hypothetical protein.)
genome : 115,263,199 - 115,266,908 (3,710)
query : 1 - 545 (545/545)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 12, cyto_nucl 9, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214028)
HIX0213910
HIT000628212 (
ENST00000529046
)
(Cold-shock protein, DNA-binding domain containing protein.)
genome : 115,276,390 - 115,300,608 (24,219)
query : 1 - 571 (571/571)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213910)
HIX0213910
HIT000624376 (
ENST00000525132
)
(Conserved hypothetical protein.)
genome : 115,279,379 - 115,300,590 (21,212)
query : 1 - 521 (521/521)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 12, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213910)
HIX0213910
HIT000633447 (
ENST00000534389
)
(Cold-shock protein, DNA-binding domain containing protein.)
genome : 115,280,609 - 115,289,480 (8,872)
query : 1 - 601 (601/601)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213910)
HIX0213910
HIT000249783
(
AK131495
)
Representative transcript
(Cold-shock protein, DNA-binding domain containing protein.)
genome : 115,281,312 - 115,284,720 (3,409)
query : 1 - 3,411 (3,411/3,411)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR002059 : Cold-shock protein, DNA-binding
IPR012340 : Nucleic acid-binding, OB-fold
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213910)
HIX0213910
HIT000625099 (
ENST00000525878
)
(Nucleic acid-binding, OB-fold domain containing protein.)
genome : 115,282,374 - 115,301,297 (18,924)
query : 1 - 626 (626/626)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, extr 9, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213910)
HIX0213910
HIT000625190 (
ENST00000525970
)
(Non-protein coding transcript.)
genome : 115,282,491 - 115,300,608 (18,118)
query : 1 - 503 (503/503)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213910)
HIX0213910
HIT000632892 (
ENST00000533818
)
(Non-protein coding transcript.)
genome : 115,290,938 - 115,300,608 (9,671)
query : 1 - 552 (552/552)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213910)
HIX0213910
HIT000623904 (
ENST00000524652
)
(Hypothetical short protein.)
genome : 115,292,442 - 115,300,608 (8,167)
query : 1 - 562 (562/562)
3 exons
identity = 0.993
3'(1.000;0.966;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 5.33333, cyto 5, nucl 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213910)
HIX0213910
HIT000457995
(
DQ591464
)
(Non-protein coding transcript.)
genome : 115,292,578 - 115,292,608 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213910)
HIX0199839
HIT000306260
(
CR749219
)
(Suppressor of IKBKE 1 isoform 1.)
genome : 115,312,106 - 115,323,299 (11,194)
query : 1 - 5,493 (5,493/5,511)
5 exons
identity = 0.998
3'(0.998;1.000;0.993;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008555 : Suppressor of IKBKE 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.6667, cyto 17.5, cyto_plas 11.1667,
nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199839)
HIX0199839
HIT000307044
(
CR936771
)
(Suppressor of IKBKE 1 isoform 1.)
genome : 115,312,106 - 115,323,299 (11,194)
query : 1 - 5,493 (5,493/5,511)
5 exons
identity = 0.998
3'(0.998;1.000;0.993;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008555 : Suppressor of IKBKE 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.6667, cyto 17.5, cyto_plas 11.1667,
nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199839)
HIX0199839
HIT000209699 (
NM_025073
)
(Suppressor of IKBKE 1; Suppressor of IKK-epsilon;)
genome : 115,312,106 - 115,323,308 (11,203)
query : 1 - 5,490 (5,490/5,507)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.1667, cyto 19, cyto_plas 11.8333, nucl 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199839)
HIX0199839
HIT000485620 (
NM_001102396
)
(Suppressor of IKBKE 1; Suppressor of IKK-epsilon;)
genome : 115,312,106 - 115,323,308 (11,203)
query : 1 - 5,502 (5,502/5,519)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.6667, cyto 17.5, cyto_plas 11.1667,
nucl 10.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199839)
HIX0199839
HIT000727152 (
NR_049741
)
(Suppressor of IKBKE 1 isoform 2.)
genome : 115,312,106 - 115,323,308 (11,203)
query : 1 - 5,552 (5,552/5,569)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 15, nucl 8, extr 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199839)
HIX0199839
HIT000727153 (
NR_049742
)
(Suppressor of IKBKE 1 isoform 2.)
genome : 115,312,106 - 115,323,308 (11,203)
query : 1 - 5,384 (5,384/5,401)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.5, cyto 9.5, extr 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199839)
HIX0199839
HIT000350808 (
ENST00000369528
)
(Suppressor of IKBKE 1; Suppressor of IKK-epsilon;)
genome : 115,312,100 - 115,323,306 (11,207)
query : 1 - 5,506 (5,506/5,506)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.6667, cyto 17.5, cyto_plas 11.1667,
nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199839)
HIX0199839
HIT000046189
(
AK126316
)
(Suppressor of IKBKE 1; Suppressor of IKK-epsilon;)
genome : 115,313,669 - 115,323,306 (9,638)
query : 1 - 3,937 (3,937/3,937)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008555 : Suppressor of IKBKE 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.6667, cyto 17.5, cyto_plas 11.1667,
nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199839)
HIX0199839
HIT000008095
(
AK024821
)
(Suppressor of IKBKE 1; Suppressor of IKK-epsilon;)
genome : 115,315,396 - 115,323,298 (7,903)
query : 1 - 2,190 (2,190/2,209)
5 exons
identity = 0.999
3'(0.999;0.991;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008555 : Suppressor of IKBKE 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.1667, cyto 17.5, cyto_plas 11.1667,
nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199839)
HIX0199839
HIT000102362 (
ENST00000060969
)
(Suppressor of IKBKE 1; Suppressor of IKK-epsilon;)
genome : 115,315,396 - 115,323,298 (7,903)
query : 1 - 2,190 (2,190/2,190)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.1667, cyto 19, cyto_plas 11.8333, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199839)
HIX0199839
HIT000032533
(
BC005934
)
Representative transcript
(Suppressor of IKBKE 1; Suppressor of IKK-epsilon;)
genome : 115,316,116 - 115,323,278 (7,163)
query : 1 - 1,450 (1,450/1,478)
5 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008555 : Suppressor of IKBKE 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.1667, cyto 19, cyto_plas 11.8333, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199839)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720809
Mus
sp. (Mouse) : AK033553
Rattus
sp. (Rat) : BC089208
Bos
sp. (Cow) : BC120197
Pongo
sp. (Orangutan) : CR859757
Monodelphis
sp. (Opossum) : ENSMODT00000005913
Oryzias
sp. (Medaka) : ENSORLT00000000913
Tetraodon
sp. (Tetraodon) : GSTENT00020561001
Takifugu
sp. (Fugu) : SINFRUT00000171677
Macaca
sp. (Macaque) : XM_001111696
Equus
sp. (Horse) : XM_001500218
Canis
sp. (Dog) : XM_540248
Danio
sp. (Zebrafish) : XM_691486
HIX0199839
HIT000384864
(
AK225734
)
(Suppressor of IKBKE 1; Suppressor of IKK-epsilon;)
genome : 115,316,747 - 115,323,299 (6,553)
query : 1 - 840 (840/859)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008555 : Suppressor of IKBKE 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.1667, cyto 19, cyto_plas 11.8333, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199839)
HIX0199839
HIT000350804 (
ENST00000369524
)
(Suppressor of IKBKE 1 isoform 2.)
genome : 115,316,763 - 115,322,811 (6,049)
query : 1 - 455 (455/455)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 16, nucl 8.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199839)
HIX0199839
HIT000610503 (
ENST00000510745
)
(Suppressor of IKBKE 1 isoform 1.)
genome : 115,316,966 - 115,323,133 (6,168)
query : 1 - 349 (349/349)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 14, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199839)
HIX0199839
HIT000606389 (
ENST00000506320
)
(Suppressor of IKBKE 1 isoform 2.)
genome : 115,319,005 - 115,323,232 (4,228)
query : 1 - 505 (505/505)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 16.5, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199839)
HIX0199839
HIT000566973 (
ENST00000462123
)
(Suppressor of IKBKE 1 isoform 1.)
genome : 115,321,719 - 115,323,158 (1,440)
query : 1 - 394 (394/394)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199839)
HIX0199839
HIT000571297 (
ENST00000466657
)
(Suppressor of IKBKE 1 isoform 2.)
genome : 115,321,728 - 115,323,306 (1,579)
query : 1 - 415 (415/415)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 12.5, cyto 11.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199839)
HIX0199839
HIT000579583 (
ENST00000475335
)
(Suppressor of IKBKE 1 isoform 2.)
genome : 115,321,728 - 115,323,255 (1,528)
query : 1 - 470 (470/470)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 19.1667, cyto_plas 12, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199839)
HIX0199839
HIT000578844 (
ENST00000474562
)
(Suppressor of IKBKE 1 isoform 1.)
genome : 115,321,735 - 115,323,248 (1,514)
query : 1 - 412 (412/412)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199839)
HIX0199839
HIT000576369 (
ENST00000471969
)
(Suppressor of IKBKE 1 isoform 1.)
genome : 115,321,823 - 115,323,116 (1,294)
query : 1 - 469 (469/469)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12, extr 8, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199839)
HIX0203669
HIT000461448_12
(
DQ594917
)
Representative transcript
(Non-protein coding transcript.)
genome : 115,332,987 - 115,333,018 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203669)
HIX0161405
HIT000550617 (
ENST00000452683
)
(Zinc finger, nuclear hormone receptor-type domain containing protein.)
genome : 115,379,848 - 115,394,074 (14,227)
query : 1 - 1,377 (1,377/1,377)
7 exons
identity = 0.986
5'(1.000;0.993;0.988;0.990;0.948;1.000;0.960)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161405)
HIX0213920
HIT000338250
(
BC105299
)
(Synaptonemal complex 1 family protein.)
genome : 115,397,535 - 115,401,205 (3,671)
query : 5 - 462 (458/486)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;0.977;1.000;1.000)3'
coverage = 0.991
InterPro :
IPR008827 : Synaptonemal complex 1
GO :
0000795 : Cellular Component : synaptonemal complex
0007130 : Biological Process : synaptonemal complex assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 9.5, extr 5, mito 5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213920)
HIX0213920
HIT000261753
(
BC065190
)
Representative transcript
(Synaptonemal complex 1 family protein.)
genome : 115,397,571 - 115,420,831 (23,261)
query : 1 - 1,011 (1,011/1,080)
12 exons
identity = 0.992
5'(1.000;1.000;1.000;1.000;1.000;0.988;1.000;
1.000;1.000;1.000;1.000;0.950)3'
coverage = 0.994
InterPro :
IPR008827 : Synaptonemal complex 1
GO :
0000795 : Cellular Component : synaptonemal complex
0007130 : Biological Process : synaptonemal complex assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 9, mito 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213920)
HIX0213920
HIT000581371 (
ENST00000477215
)
(Synaptonemal complex 1 family protein.)
genome : 115,401,171 - 115,419,503 (18,333)
query : 1 - 579 (579/579)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 12, extr 7, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213920)
HIX0213920
HIT000572770 (
ENST00000468191
)
(Synaptonemal complex 1 family protein.)
genome : 115,402,309 - 115,405,731 (3,423)
query : 1 - 396 (396/396)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213920)
HIX0214027
HIT000586637 (
ENST00000482717
)
(Synaptonemal complex 1 family protein.)
genome : 115,452,700 - 115,487,568 (34,869)
query : 1 - 763 (763/763)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 9.5, nucl 8, cyto 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214027)
HIX0214027
HIT000596815 (
ENST00000493377
)
(Synaptonemal complex 1 family protein.)
genome : 115,452,819 - 115,466,255 (13,437)
query : 1 - 783 (783/783)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, extr 3, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214027)
HIX0214197
HIT000581731 (
ENST00000477590
)
(Conserved hypothetical protein.)
genome : 115,520,178 - 115,537,975 (17,798)
query : 1 - 800 (800/800)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214197)
HIX0028781
HIT000106963 (
ENST00000256592
)
(Thyrotropin subunit beta; Thyroid-stimulating hormone subunit beta; TSH-B; TSH-beta; Thyrotropin beta chain; AltName: INN=Thyrotropin alfa; Precursor;)
genome : 115,572,415 - 115,576,941 (4,527)
query : 1 - 578 (578/578)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028781)
HIX0028781
HIT000197584 (
NM_000549
)
(Thyrotropin subunit beta; Thyroid-stimulating hormone subunit beta; TSH-B; TSH-beta; Thyrotropin beta chain; AltName: INN=Thyrotropin alfa; Precursor;)
genome : 115,572,445 - 115,576,930 (4,486)
query : 1 - 537 (537/537)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028781)
HIX0028781
HIT000350797 (
ENST00000369517
)
(Thyrotropin subunit beta; Thyroid-stimulating hormone subunit beta; TSH-B; TSH-beta; Thyrotropin beta chain; AltName: INN=Thyrotropin alfa; Precursor;)
genome : 115,575,984 - 115,576,905 (922)
query : 1 - 474 (474/474)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028781)
HIX0028781
HIT000263450
(
BC069298
)
Representative transcript
(Thyrotropin subunit beta; Thyroid-stimulating hormone subunit beta; TSH-B; TSH-beta; Thyrotropin beta chain; AltName: INN=Thyrotropin alfa; Precursor;)
genome : 115,575,984 - 115,576,848 (865)
query : 1 - 417 (417/417)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001545 : Gonadotropin, beta subunit
IPR006208 : Glycoprotein hormone subunit beta, cystine knot
IPR018245 : Gonadotropin, beta subunit, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0005179 : Molecular Function : hormone activity
0005576 : Cellular Component : extracellular region
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028781)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AF033495
Monodelphis
sp. (Opossum) : AY048589
Pongo
sp. (Orangutan) : ENSPPYT00000001196
Mus
sp. (Mouse) : J00644
Bos
sp. (Cow) : K01939
Canis
sp. (Dog) : U51644
Equus
sp. (Horse) : U51789
Rattus
sp. (Rat) : X01454
Macaca
sp. (Macaque) : XM_001111873
Pan
sp. (Chimpanzee) : XM_001160337
HIX0028781
HIT000725457 (
NM_001277991
)
(Thyrotropin subunit beta isoform 2.)
genome : 115,576,567 - 115,576,930 (364)
query : 1 - 364 (364/364)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028781)
HIX0000918
HIT000202393 (
NM_005725
)
(Tetraspanin-2; Tspan-2; Tetraspan NET-3;)
genome : 115,590,632 - 115,632,121 (41,490)
query : 1 - 3,213 (3,213/3,213)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000918)
HIX0000918
HIT000350796 (
ENST00000369516
)
(Tetraspanin-2; Tspan-2; Tetraspan NET-3;)
genome : 115,590,632 - 115,632,085 (41,454)
query : 1 - 3,177 (3,177/3,177)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000918)
HIX0029078
HIT000005418
(
AK022144
)
Representative transcript
(Conserved hypothetical protein.)
genome : 115,590,635 - 115,593,033 (2,399)
query : 1 - 2,403 (2,403/2,403)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, extr 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029078)
HIX0000918
HIT000039242
(
BC021675
)
Representative transcript
(Tetraspanin-2; Tspan-2; Tetraspan NET-3;)
genome : 115,591,838 - 115,632,085 (40,248)
query : 2 - 1,973 (1,972/2,006)
8 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;1.000;0.990;1.000;
1.000)5'
coverage = 0.998
InterPro :
IPR000301 : Tetraspanin
IPR008952 : Tetraspanin, EC2 domain
IPR018499 : Tetraspanin/Peripherin
IPR018503 : Tetraspanin, conserved site
IPR028977 : CD81 antigen, large extracellular loop domain
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000918)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AJ271442
Mus
sp. (Mouse) : AK079560
Danio
sp. (Zebrafish) : BC095323
Gallus
sp. (Chicken) : CR353115
Tetraodon
sp. (Tetraodon) : CR661265
Tetraodon
sp. (Tetraodon) : CR704758
Bos
sp. (Cow) : ENSBTAT00000021222
Equus
sp. (Horse) : ENSECAT00000011410
Oryzias
sp. (Medaka) : ENSORLT00000010975
Pongo
sp. (Orangutan) : ENSPPYT00000001195
Takifugu
sp. (Fugu) : SINFRUT00000131822
Macaca
sp. (Macaque) : XM_001111915
Monodelphis
sp. (Opossum) : XM_001362798
Pan
sp. (Chimpanzee) : XM_513675
Danio
sp. (Zebrafish) : XM_690266
Canis
sp. (Dog) : XM_843666
HIX0000918
HIT000350795 (
ENST00000369515
)
(Tetraspanin-2; Tspan-2; Tetraspan NET-3;)
genome : 115,592,977 - 115,632,121 (39,145)
query : 1 - 793 (793/793)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000918)
HIX0000918
HIT000531106 (
ENST00000433172
)
(Tetraspanin-2; Tspan-2; Tetraspan NET-3;)
genome : 115,593,004 - 115,632,035 (39,032)
query : 1 - 671 (671/671)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000918)
HIX0000918
HIT000595496 (
ENST00000491992
)
(Tetraspanin-2; Tspan-2; Tetraspan NET-3;)
genome : 115,593,066 - 115,601,046 (7,981)
query : 1 - 464 (464/464)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19, mito 6, cyto 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000918)
HIX0000918
HIT000434251
(
AK315385
)
(Tetraspanin-2; Tspan-2; Tetraspan NET-3;)
genome : 115,593,111 - 115,632,081 (38,971)
query : 1 - 694 (694/694)
8 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;0.990;0.990;
1.000)5'
coverage = 1.000
InterPro :
IPR000301 : Tetraspanin
IPR008952 : Tetraspanin, EC2 domain
IPR018499 : Tetraspanin/Peripherin
IPR018503 : Tetraspanin, conserved site
IPR028977 : CD81 antigen, large extracellular loop domain
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000918)
HIX0000918
HIT000064591
(
AF054839
)
(Tetraspanin-2; Tspan-2; Tetraspan NET-3;)
genome : 115,593,111 - 115,632,053 (38,943)
query : 1 - 669 (669/669)
8 exons
identity = 0.990
3'(1.000;1.000;0.959;0.980;1.000;0.980;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000301 : Tetraspanin
IPR008952 : Tetraspanin, EC2 domain
IPR018499 : Tetraspanin/Peripherin
IPR018503 : Tetraspanin, conserved site
IPR028977 : CD81 antigen, large extracellular loop domain
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000918)
HIX0000918
HIT000350794 (
ENST00000369514
)
(Tetraspanin-2; Tspan-2; Tetraspan NET-3;)
genome : 115,593,111 - 115,632,053 (38,943)
query : 1 - 582 (582/582)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000918)
HIX0000918
HIT000649096
(
GU971730
)
(Tetraspanin-2; Tspan-2; Tetraspan NET-3;)
genome : 115,593,111 - 115,632,053 (38,943)
query : 1 - 582 (582/582)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000301 : Tetraspanin
IPR008952 : Tetraspanin, EC2 domain
IPR018499 : Tetraspanin/Peripherin
IPR018503 : Tetraspanin, conserved site
IPR028977 : CD81 antigen, large extracellular loop domain
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000918)
HIX0161299
HIT000546614 (
ENST00000448680
)
(Hypothetical short protein.)
genome : 115,642,293 - 115,645,279 (2,987)
query : 1 - 491 (491/491)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5, mito 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161299)
HIX0077639
HIT000261269
(
BC063894
)
Representative transcript
(Pre-mRNA-splicing factor SPF27.)
genome : 115,064,017 - 115,213,044 (149,028)
query : 1 - 5,255 (5,255/5,277)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.978;1.000;1.000;1.000;1.000;
0.999;1.000)5'
coverage = 1.000
InterPro :
IPR008409 : Pre-mRNA-splicing factor SPF27
GO :
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 18.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077639)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC085427
Gallus
sp. (Chicken) : BX935624
Gallus
sp. (Chicken) : CR385526
HIX0000915
HIT000320943
(
X02751
)
(GTPase NRas; Transforming protein N-Ras; Precursor;)
genome : 115,249,585 - 115,259,988 (10,404)
query : 1 - 2,436 (2,436/2,436)
7 exons
identity = 0.991
3'(0.986;1.000;1.000;1.000;1.000;1.000;0.990)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000306415
(
CR749378
)
(Cold shock domain-containing protein E1; N-ras upstream gene protein; Protein UNR;)
genome : 115,259,537 - 115,292,811 (33,275)
query : 1 - 4,167 (4,167/4,188)
20 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;1.000;1.000;1.000;
0.990;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR002059 : Cold-shock protein, DNA-binding
IPR011129 : Cold shock protein
IPR012340 : Nucleic acid-binding, OB-fold
IPR019844 : Cold-shock conserved site
IPR024642 : SUZ-C domain
GO :
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000203673 (
NM_007158
)
(Cold shock domain-containing protein E1 isoform 2.)
genome : 115,259,534 - 115,300,671 (41,138)
query : 1 - 4,073 (4,073/4,090)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000316468 (
NM_001007553
)
(Cold shock domain-containing protein E1; N-ras upstream gene protein; Protein UNR;)
genome : 115,259,534 - 115,300,671 (41,138)
query : 1 - 4,166 (4,166/4,183)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000559725 (
NM_001130523
)
(Cold shock domain-containing protein E1 isoform 3.)
genome : 115,259,534 - 115,300,671 (41,138)
query : 1 - 4,220 (4,220/4,237)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000722763 (
NM_001242891
)
(Cold shock domain-containing protein E1; N-ras upstream gene protein; Protein UNR;)
genome : 115,259,534 - 115,300,671 (41,138)
query : 1 - 4,313 (4,313/4,330)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000722764 (
NM_001242892
)
(Cold shock domain-containing protein E1; N-ras upstream gene protein; Protein UNR;)
genome : 115,259,534 - 115,300,671 (41,138)
query : 1 - 3,779 (3,779/3,796)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000722765 (
NM_001242893
)
(Cold shock domain-containing protein E1 isoform 2.)
genome : 115,259,534 - 115,300,671 (41,138)
query : 1 - 3,686 (3,686/3,703)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000306462
(
CR749431
)
(Cold shock domain-containing protein E1; Protein UNR; Fragment;)
genome : 115,259,537 - 115,300,602 (41,066)
query : 2 - 4,149 (4,148/4,168)
20 exons
identity = 0.998
3'(0.998;1.000;0.994;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;0.995;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;0.992;1.000)5'
coverage = 1.000
InterPro :
IPR002059 : Cold-shock protein, DNA-binding
IPR011129 : Cold shock protein
IPR012340 : Nucleic acid-binding, OB-fold
IPR019844 : Cold-shock conserved site
IPR024642 : SUZ-C domain
GO :
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000057427
(
BX648780
)
(Cold shock domain-containing protein E1; Protein UNR; Fragment;)
genome : 115,259,537 - 115,300,604 (41,068)
query : 2 - 4,003 (4,002/4,021)
19 exons
identity = 0.998
3'(0.998;0.992;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;1.000;1.000;0.997;0.983)5'
coverage = 1.000
InterPro :
IPR002059 : Cold-shock protein, DNA-binding
IPR011129 : Cold shock protein
IPR012340 : Nucleic acid-binding, OB-fold
IPR019844 : Cold-shock conserved site
IPR024642 : SUZ-C domain
GO :
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000132068 (
ENST00000339438
)
(Cold shock domain-containing protein E1 isoform 2.)
genome : 115,259,534 - 115,300,604 (41,071)
query : 1 - 4,006 (4,006/4,006)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000536296 (
ENST00000438362
)
(Cold shock domain-containing protein E1; N-ras upstream gene protein; Protein UNR;)
genome : 115,259,537 - 115,292,811 (33,275)
query : 1 - 4,167 (4,167/4,167)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000000602
(
AB020692
)
Representative transcript
(Cold shock domain-containing protein E1; N-ras upstream gene protein; Protein UNR;)
genome : 115,259,538 - 115,300,585 (41,048)
query : 1 - 4,076 (4,076/4,076)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB072746
Gallus
sp. (Chicken) : AJ851668
Mus
sp. (Mouse) : BC062097
Bos
sp. (Cow) : BC140514
Tetraodon
sp. (Tetraodon) : CR648049
Pongo
sp. (Orangutan) : CR860764
Oryzias
sp. (Medaka) : ENSORLT00000000879
Takifugu
sp. (Fugu) : SINFRUT00000180392
Rattus
sp. (Rat) : X52311
Pan
sp. (Chimpanzee) : XM_001160588
Danio
sp. (Zebrafish) : XM_001335876
Monodelphis
sp. (Opossum) : XM_001362149
Equus
sp. (Horse) : XM_001917756
Canis
sp. (Dog) : XM_533016
HIX0000915
HIT000312220 (
ENST00000358528
)
(Cold shock domain-containing protein E1; N-ras upstream gene protein; Protein UNR;)
genome : 115,259,538 - 115,300,585 (41,048)
query : 1 - 4,076 (4,076/4,076)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000024028
(
AL050150
)
(Cold shock domain-containing protein E1; Protein UNR; Fragment;)
genome : 115,259,910 - 115,272,947 (13,038)
query : 1 - 1,990 (1,990/2,006)
9 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002059 : Cold-shock protein, DNA-binding
IPR011129 : Cold shock protein
IPR012340 : Nucleic acid-binding, OB-fold
IPR024642 : SUZ-C domain
GO :
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 12, cyto_nucl 9.5, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000024458
(
AL110192
)
(Cold shock domain-containing protein E1 isoform 2.)
genome : 115,259,917 - 115,263,330 (3,414)
query : 1 - 1,389 (1,389/1,409)
4 exons
identity = 0.999
3'(1.000;0.985;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR002059 : Cold-shock protein, DNA-binding
IPR011129 : Cold shock protein
IPR012340 : Nucleic acid-binding, OB-fold
IPR024642 : SUZ-C domain
GO :
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, extr 11, cyto_nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000090442
(
BC021692
)
(Cold shock domain-containing protein E1; Protein UNR; Fragment;)
genome : 115,259,942 - 115,268,891 (8,950)
query : 4 - 1,668 (1,665/1,699)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR002059 : Cold-shock protein, DNA-binding
IPR011129 : Cold shock protein
IPR012340 : Nucleic acid-binding, OB-fold
IPR024642 : SUZ-C domain
GO :
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 12, cyto_nucl 9.5, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000107972 (
ENST00000261443
)
(Cold shock domain-containing protein E1 isoform 2.)
genome : 115,259,916 - 115,300,595 (40,680)
query : 1 - 3,228 (3,228/3,228)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000005790
(
AK022516
)
(Cold shock domain-containing protein E1; Protein UNR; Fragment;)
genome : 115,259,916 - 115,300,573 (40,658)
query : 1 - 3,206 (3,206/3,206)
18 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995;1.000)5'
coverage = 1.000
InterPro :
IPR002059 : Cold-shock protein, DNA-binding
IPR011129 : Cold shock protein
IPR012340 : Nucleic acid-binding, OB-fold
IPR019844 : Cold-shock conserved site
IPR024642 : SUZ-C domain
GO :
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000005802
(
AK022528
)
(Cold shock domain-containing protein E1; Protein UNR; Fragment;)
genome : 115,259,916 - 115,300,573 (40,658)
query : 1 - 3,206 (3,206/3,206)
18 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995;1.000)5'
coverage = 1.000
InterPro :
IPR002059 : Cold-shock protein, DNA-binding
IPR011129 : Cold shock protein
IPR012340 : Nucleic acid-binding, OB-fold
IPR019844 : Cold-shock conserved site
IPR024642 : SUZ-C domain
GO :
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000049663
(
AK130392
)
(Cold shock domain-containing protein E1; Protein UNR; Fragment;)
genome : 115,259,916 - 115,269,688 (9,773)
query : 1 - 1,893 (1,893/1,893)
8 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR002059 : Cold-shock protein, DNA-binding
IPR011129 : Cold shock protein
IPR012340 : Nucleic acid-binding, OB-fold
IPR024642 : SUZ-C domain
GO :
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 12, cyto_nucl 9.5, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000057208
(
BX648561
)
(Cold shock domain-containing protein E1; Protein UNR; Fragment;)
genome : 115,259,941 - 115,292,643 (32,703)
query : 2 - 3,503 (3,502/3,523)
19 exons
identity = 0.998
3'(0.998;1.000;1.000;0.994;1.000;0.991;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.990;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002059 : Cold-shock protein, DNA-binding
IPR011129 : Cold shock protein
IPR012340 : Nucleic acid-binding, OB-fold
IPR019844 : Cold-shock conserved site
IPR024642 : SUZ-C domain
GO :
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000630025 (
ENST00000530886
)
(Cold shock domain-containing protein E1 isoform 1.)
genome : 115,259,926 - 115,300,648 (40,723)
query : 1 - 3,459 (3,459/3,459)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000350810 (
ENST00000369530
)
(Cold shock domain-containing protein E1 isoform 3.)
genome : 115,259,933 - 115,300,624 (40,692)
query : 1 - 3,774 (3,774/3,774)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000001798
(
AF077054
)
(Conserved hypothetical protein.)
genome : 115,259,952 - 115,300,578 (40,627)
query : 1 - 3,573 (3,573/3,582)
19 exons
identity = 0.995
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.940;1.000;0.992;1.000;1.000;
1.000;0.982;0.995;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000089353
(
BC017662
)
(Cold shock domain-containing protein E1 isoform 2.)
genome : 115,260,033 - 115,300,595 (40,563)
query : 1 - 3,110 (3,110/3,125)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.991;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002059 : Cold-shock protein, DNA-binding
IPR011129 : Cold shock protein
IPR012340 : Nucleic acid-binding, OB-fold
IPR019844 : Cold-shock conserved site
IPR024642 : SUZ-C domain
GO :
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000083851
(
AY049788
)
(Cold shock domain-containing protein E1 isoform 2.)
genome : 115,260,573 - 115,282,513 (21,941)
query : 14 - 2,537 (2,524/2,537)
17 exons
identity = 0.999
3'(1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR002059 : Cold-shock protein, DNA-binding
IPR011129 : Cold shock protein
IPR012340 : Nucleic acid-binding, OB-fold
IPR019844 : Cold-shock conserved site
GO :
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000422943
(
AK290146
)
(Cold shock domain-containing protein E1; N-ras upstream gene protein; Protein UNR;)
genome : 115,260,578 - 115,300,603 (40,026)
query : 1 - 2,667 (2,667/2,667)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002059 : Cold-shock protein, DNA-binding
IPR011129 : Cold shock protein
IPR012340 : Nucleic acid-binding, OB-fold
IPR019844 : Cold-shock conserved site
IPR024642 : SUZ-C domain
GO :
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000633746 (
ENST00000534699
)
(Cold shock domain-containing protein E1; N-ras upstream gene protein; Protein UNR;)
genome : 115,260,578 - 115,300,603 (40,026)
query : 1 - 2,667 (2,667/2,667)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000041538
(
BC032446
)
(Cold shock domain-containing protein E1 isoform 2.)
genome : 115,260,605 - 115,300,601 (39,997)
query : 6 - 2,937 (2,932/2,951)
19 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.964)5'
coverage = 0.998
InterPro :
IPR002059 : Cold-shock protein, DNA-binding
IPR011129 : Cold shock protein
IPR012340 : Nucleic acid-binding, OB-fold
IPR019844 : Cold-shock conserved site
IPR024642 : SUZ-C domain
GO :
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0000915
HIT000065709
(
AF070542
)
(Cold shock domain-containing protein E1 isoform 2.)
genome : 115,269,603 - 115,292,534 (22,932)
query : 18 - 1,482 (1,465/1,511)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.981
InterPro :
IPR002059 : Cold-shock protein, DNA-binding
IPR011129 : Cold shock protein
IPR012340 : Nucleic acid-binding, OB-fold
IPR019844 : Cold-shock conserved site
GO :
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000915)
HIX0028584
HIT000350802 (
ENST00000369522
)
(Synaptonemal complex protein 1; SCP-1; Cancer/testis antigen 8; CT8;)
genome : 115,397,424 - 115,537,991 (140,568)
query : 1 - 3,522 (3,522/3,522)
32 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 5, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028584)
HIX0028584
HIT000200034 (
NM_003176
)
(Synaptonemal complex protein 1; SCP-1; Cancer/testis antigen 8; CT8;)
genome : 115,397,455 - 115,537,989 (140,535)
query : 1 - 3,489 (3,489/3,503)
32 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 5, cyto_golg 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028584)
HIX0028584
HIT000040120
(
BC026162
)
(Synaptonemal complex protein 1; SCP-1; Cancer/testis antigen 8; CT8;)
genome : 115,397,461 - 115,537,989 (140,529)
query : 1 - 3,484 (3,484/3,499)
32 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.984;
1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR008827 : Synaptonemal complex 1
GO :
0000795 : Cellular Component : synaptonemal complex
0007130 : Biological Process : synaptonemal complex assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 5, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028584)
HIX0028584
HIT000434134
(
AK315268
)
(Synaptonemal complex protein 1.)
genome : 115,397,465 - 115,537,640 (140,176)
query : 1 - 3,058 (3,058/3,058)
31 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008827 : Synaptonemal complex 1
GO :
0000795 : Cellular Component : synaptonemal complex
0007130 : Biological Process : synaptonemal complex assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 5, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028584)
HIX0028584
HIT000075855
(
AF273043
)
(Synaptonemal complex protein 1.)
genome : 115,397,489 - 115,520,224 (122,736)
query : 1 - 2,547 (2,547/2,564)
28 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008827 : Synaptonemal complex 1
GO :
0000795 : Cellular Component : synaptonemal complex
0007130 : Biological Process : synaptonemal complex assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 8, cyto_golg 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028584)
HIX0028584
HIT000553921 (
ENST00000455987
)
(Synaptonemal complex protein 1.)
genome : 115,397,489 - 115,520,231 (122,743)
query : 1 - 2,554 (2,554/2,554)
28 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.1667, cyto 11.5,
cyto_golg 7.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028584)
HIX0028584
HIT000388858
(
BC126266
)
Representative transcript
(Synaptonemal complex protein 1; SCP-1; Cancer/testis antigen 8; CT8;)
genome : 115,397,547 - 115,537,731 (140,185)
query : 1 - 3,139 (3,139/3,139)
32 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008827 : Synaptonemal complex 1
GO :
0000795 : Cellular Component : synaptonemal complex
0007130 : Biological Process : synaptonemal complex assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 5, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028584)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC045503
Canis
sp. (Dog) : ENSCAFT00000015417
Gallus
sp. (Chicken) : ENSGALT00000003960
Monodelphis
sp. (Opossum) : ENSMODT00000006036
Pongo
sp. (Orangutan) : ENSPPYT00000001197
Rattus
sp. (Rat) : X67805
Macaca
sp. (Macaque) : XM_001111808
Equus
sp. (Horse) : XM_001496116
Pan
sp. (Chimpanzee) : XM_513674
Bos
sp. (Cow) : XR_027427
Mus
sp. (Mouse) : Z38118
HIX0028584
HIT000502455
(
BC144019
)
(Synaptonemal complex protein 1; SCP-1; Cancer/testis antigen 8; CT8;)
genome : 115,397,547 - 115,537,731 (140,185)
query : 1 - 3,142 (3,142/3,142)
32 exons
identity = 0.999
5'(1.000;1.000;1.000;0.977;1.000;1.000;1.000;
1.000;0.983;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008827 : Synaptonemal complex 1
GO :
0000795 : Cellular Component : synaptonemal complex
0007130 : Biological Process : synaptonemal complex assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 5, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028584)
HIX0028584
HIT000502456
(
BC144020
)
(Synaptonemal complex protein 1.)
genome : 115,397,547 - 115,537,722 (140,176)
query : 1 - 3,234 (3,234/3,234)
33 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.983;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.984;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008827 : Synaptonemal complex 1
GO :
0000795 : Cellular Component : synaptonemal complex
0007130 : Biological Process : synaptonemal complex assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6, cyto_golg 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028584)
HIX0028584
HIT000324920
(
X95654
)
(Synaptonemal complex protein 1; SCP-1; Cancer/testis antigen 8; CT8;)
genome : 115,397,571 - 115,537,989 (140,419)
query : 1 - 3,374 (3,374/3,393)
32 exons
identity = 0.996
5'(0.914;1.000;0.988;1.000;1.000;0.994;1.000;
1.000;1.000;0.957;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.994)3'
coverage = 1.000
InterPro :
IPR008827 : Synaptonemal complex 1
GO :
0000795 : Cellular Component : synaptonemal complex
0007130 : Biological Process : synaptonemal complex assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6, cyto_golg 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028584)
HIX0028584
HIT000101719
(
D67035
)
(Synaptonemal complex protein 1.)
genome : 115,397,754 - 115,537,988 (140,235)
query : 4 - 3,446 (3,443/3,446)
32 exons
identity = 0.989
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.956;
1.000;0.983;1.000;1.000;1.000;1.000;0.989;
0.941;1.000;0.990;0.894;0.873;0.986;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR008827 : Synaptonemal complex 1
GO :
0000795 : Cellular Component : synaptonemal complex
0007130 : Biological Process : synaptonemal complex assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7, cyto_golg 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028584)
HIX0028584
HIT000350798 (
ENST00000369518
)
(Synaptonemal complex protein 1; SCP-1; Cancer/testis antigen 8; CT8;)
genome : 115,397,754 - 115,537,988 (140,235)
query : 1 - 3,452 (3,452/3,452)
32 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 5, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028584)
AL133517.11
114200001-114296643 F -
NCBI
AL365321.16
114296644-114337534 F +
NCBI
AL137856.24
114337535-114479153 F +
NCBI
AL731797.9
114479154-114525406 F +
NCBI
AL591742.7
114525407-114609455 F +
NCBI
AL162594.13
114609456-114721553 F +
NCBI
AL121999.18
114721554-114858943 F -
NCBI
AL512291.7
114858944-114860450 F +
NCBI
AL035410.7
114860451-115002902 F -
NCBI
AL390241.19
115002903-115126303 F +
NCBI
AL133382.8
115126304-115207622 F +
NCBI
AL096773.6
115207623-115347729 F -
NCBI
AL390235.30
115347730-115368832 F +
NCBI
AL358372.11
115368833-115522651 F +
NCBI
AL645502.7
115522652-115546396 F +
NCBI
AL109660.14
115546397-115683959 F +
NCBI
AL139428.15
115683960-115725638 F +
NCBI
AL049825.18
115725639-115800000 F -
NCBI