bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0028707
HIT000563522_01 (
NR_027468
)
(Protein FAM91A1.)
genome : 143,718,513 - 144,340,782 (622,270)
query : 1 - 1,065 (1,065/1,065)
5 exons
identity = 0.996
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, extr 9, mito_nucl 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0000962
HIT000350645_13 (
ENST00000369365
)
(Neuroblastoma breakpoint family (NBPF) domain containing protein.)
genome : 144,146,812 - 144,224,481 (77,670)
query : 1 - 11,691 (11,691/11,691)
91 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000330081_05
(
AF379616
)
(Neuroblastoma breakpoint family member 10.)
genome : 144,161,851 - 144,830,302 (668,452)
query : 1 - 2,930 (2,930/2,982)
9 exons
identity = 0.968
5'(0.962;0.983;0.946;0.962)3'
coverage = 1.000
InterPro :
IPR010630 : Neuroblastoma breakpoint family (NBPF) domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, E.R. 4.5, E.R._golg 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0213878
HIT000078621_03
(
AF379636
)
(Neuroblastoma breakpoint family (NBPF) domain containing protein.)
genome : 144,185,865 - 144,827,879 (642,015)
query : 1 - 1,660 (1,660/1,660)
14 exons
identity = 0.997
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR010630 : Neuroblastoma breakpoint family (NBPF) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213878)
HIX0028707
HIT000524235 (
ENST00000426301
)
(Conserved hypothetical protein.)
genome : 144,275,918 - 144,341,077 (65,160)
query : 1 - 2,084 (2,084/2,084)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000544108_01 (
ENST00000446174
)
(Myomegalin; Phosphodiesterase 4D-interacting protein;)
genome : 144,276,398 - 144,311,564 (35,167)
query : 1 - 660 (660/660)
4 exons
identity = 0.997
3'(1.000;0.988;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000552034_01 (
ENST00000454100
)
(Myomegalin; Phosphodiesterase 4D-interacting protein;)
genome : 144,276,398 - 144,311,564 (35,167)
query : 1 - 660 (660/660)
4 exons
identity = 0.997
3'(1.000;0.988;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000519970_01 (
ENST00000422036
)
(Myomegalin; Cardiomyopathy-associated protein 2; Phosphodiesterase 4D-interacting protein;)
genome : 144,276,398 - 144,311,493 (35,096)
query : 1 - 851 (851/851)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8.5, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000541176_01 (
ENST00000443242
)
(Myomegalin; Cardiomyopathy-associated protein 2; Phosphodiesterase 4D-interacting protein;)
genome : 144,276,398 - 144,311,492 (35,095)
query : 1 - 850 (850/850)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 12, cyto_nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000509729 (
ENST00000411795
)
(Myomegalin; Phosphodiesterase 4D-interacting protein;)
genome : 144,276,402 - 144,340,736 (64,335)
query : 1 - 1,540 (1,540/1,540)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 2.5, cyto_nucl 2.5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000527175 (
ENST00000429241
)
(Myomegalin; Phosphodiesterase 4D-interacting protein;)
genome : 144,277,291 - 144,311,564 (34,274)
query : 1 - 893 (893/893)
6 exons
identity = 0.987
3'(1.000;1.000;0.894;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, extr 5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000710407_01 (
ENST00000598642
)
(Myomegalin; Cardiomyopathy-associated protein 2; Phosphodiesterase 4D-interacting protein;)
genome : 144,279,606 - 144,289,974 (10,369)
query : 1 - 777 (777/777)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000547026 (
ENST00000449092
)
(Hypothetical short protein.)
genome : 144,280,383 - 144,281,169 (787)
query : 1 - 490 (490/490)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 8.66667, nucl 7, cyto 6,
cyto_pero 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000711821_01 (
ENST00000600072
)
(Myomegalin; Phosphodiesterase 4D-interacting protein;)
genome : 144,281,106 - 144,290,356 (9,251)
query : 1 - 573 (573/573)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15.5, nucl 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000519889_01 (
ENST00000421955
)
(Myomegalin; Phosphodiesterase 4D-interacting protein;)
genome : 144,281,153 - 144,290,308 (9,156)
query : 1 - 375 (375/375)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 8, mito_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000537840_01 (
ENST00000439906
)
(Myomegalin; Phosphodiesterase 4D-interacting protein;)
genome : 144,281,154 - 144,290,308 (9,155)
query : 1 - 374 (374/374)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 9, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000550414_01 (
ENST00000452480
)
(Myomegalin; Phosphodiesterase 4D-interacting protein;)
genome : 144,281,154 - 144,290,308 (9,155)
query : 1 - 374 (374/374)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 9, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000534145_01 (
ENST00000436211
)
(Myomegalin; Cardiomyopathy-associated protein 2; Phosphodiesterase 4D-interacting protein;)
genome : 144,281,157 - 144,289,980 (8,824)
query : 1 - 454 (454/454)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000516908_01 (
ENST00000418974
)
(Myomegalin; Phosphodiesterase 4D-interacting protein;)
genome : 144,284,105 - 144,311,653 (27,549)
query : 1 - 769 (769/769)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11, cyto_nucl 9.33333, cyto 5.5,
cyto_pero 3.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000527430_01 (
ENST00000429496
)
(Myomegalin; Phosphodiesterase 4D-interacting protein;)
genome : 144,284,105 - 144,311,653 (27,549)
query : 1 - 769 (769/769)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11, cyto_nucl 9.33333, cyto 5.5,
cyto_pero 3.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000515910 (
ENST00000417976
)
(Conserved hypothetical protein.)
genome : 144,299,758 - 144,301,536 (1,779)
query : 1 - 1,054 (1,054/1,054)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000260993
(
BC063535
)
(Conserved hypothetical protein.)
genome : 144,300,518 - 144,340,745 (40,228)
query : 1 - 1,239 (1,239/1,283)
2 exons
identity = 0.998
3'(0.999;0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000562684 (
NR_024510
)
(Conserved hypothetical protein.)
genome : 144,300,512 - 144,340,773 (40,262)
query : 1 - 1,273 (1,273/1,287)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000562685 (
NR_024511
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,300,512 - 144,340,773 (40,262)
query : 1 - 839 (839/853)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 9.5, mito_nucl 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000260195
(
BC061517
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,300,512 - 144,340,671 (40,160)
query : 1 - 737 (737/751)
3 exons
identity = 0.996
3'(0.996;0.994;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 9.5, mito_nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000264965
(
BC073170
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,300,512 - 144,340,671 (40,160)
query : 1 - 737 (737/751)
3 exons
identity = 0.996
3'(0.996;0.994;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 9.5, mito_nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000087415
(
BC009950
)
(Conserved hypothetical protein.)
genome : 144,300,518 - 144,340,681 (40,164)
query : 1 - 1,175 (1,175/1,192)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000335110
(
BC094809
)
(Conserved hypothetical protein.)
genome : 144,300,518 - 144,340,681 (40,164)
query : 1 - 1,175 (1,175/1,192)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000090455
(
BC021732
)
(Conserved hypothetical protein.)
genome : 144,300,526 - 144,340,776 (40,251)
query : 6 - 1,268 (1,263/1,285)
2 exons
identity = 0.993
3'(0.993;0.992)5'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000539357 (
ENST00000441423
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,300,512 - 144,340,671 (40,160)
query : 1 - 737 (737/737)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 9.5, mito_nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000537266 (
ENST00000439332
)
(Conserved hypothetical protein.)
genome : 144,300,515 - 144,340,736 (40,222)
query : 1 - 1,233 (1,233/1,233)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0213993
HIT000555579_01 (
ENST00000457645
)
(Hypothetical protein.)
genome : 144,300,517 - 144,301,385 (869)
query : 1 - 554 (554/554)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 6, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213993)
HIX0213993
HIT000532093_01 (
ENST00000434159
)
(Hypothetical protein.)
genome : 144,300,524 - 144,301,280 (757)
query : 1 - 442 (442/442)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 12, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213993)
HIX0213993
HIT000555925_01 (
ENST00000457991
)
(Hypothetical protein.)
genome : 144,300,644 - 144,311,592 (10,949)
query : 1 - 603 (603/603)
3 exons
identity = 0.992
5'(1.000;1.000;0.966)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 12.5, extr 8, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213993)
HIX0028707
HIT000430244_03
(
AK311378
)
(Hypothetical protein.)
genome : 144,300,666 - 144,340,749 (40,084)
query : 1 - 1,095 (1,095/1,095)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.3333, nucl 14, cyto 8.5, cyto_pero 5.5,
extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000512053 (
ENST00000414119
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,301,325 - 144,341,057 (39,733)
query : 1 - 517 (517/517)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000520563 (
ENST00000422629
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,301,398 - 144,341,756 (40,359)
query : 1 - 324 (324/324)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3, mito 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000517039_01 (
ENST00000419105
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,324,956 - 144,340,593 (15,638)
query : 1 - 1,001 (1,001/1,001)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, extr 7, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000531532_01 (
ENST00000433598
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,325,552 - 144,340,593 (15,042)
query : 1 - 405 (405/405)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, extr 7, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000533338_01 (
ENST00000435404
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,325,552 - 144,340,593 (15,042)
query : 1 - 405 (405/405)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, extr 7, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000510128 (
ENST00000412194
)
(Hypothetical short protein.)
genome : 144,325,839 - 144,336,254 (10,416)
query : 1 - 373 (373/373)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000553229_01 (
ENST00000455295
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,326,025 - 144,340,754 (14,730)
query : 1 - 390 (390/390)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 6.5, cyto 5.5, nucl 4.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000538653_01 (
ENST00000440719
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,326,026 - 144,340,754 (14,729)
query : 1 - 389 (389/389)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 6.5, cyto 5.5, nucl 4.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0214321
HIT000706699_01 (
ENST00000594899
)
(Hypothetical short protein.)
genome : 144,329,279 - 144,329,765 (487)
query : 1 - 487 (487/487)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, cyto_nucl 4.33333, cyto 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214321)
HIX0028707
HIT000328501_03
(
AB074166
)
(Hypothetical short protein.)
genome : 144,334,624 - 144,336,702 (2,079)
query : 1 - 2,080 (2,080/2,083)
1 exon
identity = 0.992
3'(0.992)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14, nucl 10, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000515488_01 (
ENST00000417554
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,339,564 - 144,340,683 (1,120)
query : 1 - 213 (213/213)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 7.5, nucl 6.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0028707
HIT000550290_01 (
ENST00000452356
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,339,564 - 144,340,613 (1,050)
query : 1 - 143 (143/143)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 7.5, nucl 6.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028707)
HIX0203880
HIT000637309 (
ENST00000538264
)
(Conserved hypothetical protein.)
genome : 144,339,738 - 144,521,058 (181,321)
query : 1 - 1,073 (1,073/1,073)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203880)
HIX0203880
HIT000689793 (
ENST00000577843
)
(Conserved hypothetical protein.)
genome : 144,339,738 - 144,340,808 (1,071)
query : 1 - 1,071 (1,071/1,088)
1 exon
identity = 0.990
5'(0.990)3'
coverage = 0.984
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 15.5, cyto 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203880)
HIX0203880
HIT000695196 (
ENST00000583315
)
(Conserved hypothetical protein.)
genome : 144,339,738 - 144,340,808 (1,071)
query : 1 - 1,071 (1,071/1,088)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.984
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203880)
HIX0203880
HIT000393272
(
DQ786219
)
Representative transcript
(Hypothetical protein.)
genome : 144,340,599 - 144,341,480 (882)
query : 2 - 573 (572/589)
3 exons
identity = 0.981
5'(0.994;0.969;0.987)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 14, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203880)
HIX0159737
HIT000560878 (
NM_001143883
)
(Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain containing protein.)
genome : 144,363,462 - 144,364,246 (785)
query : 1 - 785 (785/785)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11, mito 6, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159737)
HIX0159737
HIT000639318 (
ENST00000540273
)
(Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain containing protein.)
genome : 144,363,462 - 144,364,246 (785)
query : 1 - 785 (785/785)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11, mito 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159737)
HIX0159737
HIT000689806 (
ENST00000577856
)
(Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain containing protein.)
genome : 144,363,462 - 144,364,246 (785)
query : 1 - 785 (785/785)
1 exon
identity = 0.985
3'(0.985)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11, mito 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159737)
HIX0159737
HIT000693046 (
ENST00000581138
)
(Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain containing protein.)
genome : 144,363,462 - 144,364,246 (785)
query : 1 - 785 (785/785)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11, mito 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159737)
HIX0159737
HIT000694982 (
ENST00000583101
)
(Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain containing protein.)
genome : 144,363,462 - 144,364,246 (785)
query : 1 - 785 (785/785)
1 exon
identity = 0.990
3'(0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11, mito 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159737)
HIX0029407
HIT000527948 (
ENST00000430014
)
(Conserved hypothetical protein.)
genome : 144,456,148 - 144,521,291 (65,144)
query : 1 - 2,063 (2,063/2,073)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, cyto 11.5, extr 11, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000544108_02 (
ENST00000446174
)
(Myomegalin; Phosphodiesterase 4D-interacting protein;)
genome : 144,456,641 - 144,491,793 (35,153)
query : 1 - 660 (660/660)
4 exons
identity = 0.997
3'(1.000;0.988;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000552034_02 (
ENST00000454100
)
(Myomegalin; Phosphodiesterase 4D-interacting protein;)
genome : 144,456,641 - 144,491,793 (35,153)
query : 1 - 660 (660/660)
4 exons
identity = 0.997
3'(1.000;0.988;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000519970_02 (
ENST00000422036
)
(Myomegalin; Cardiomyopathy-associated protein 2; Phosphodiesterase 4D-interacting protein;)
genome : 144,456,641 - 144,491,722 (35,082)
query : 1 - 851 (851/851)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8.5, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000541176_02 (
ENST00000443242
)
(Myomegalin; Cardiomyopathy-associated protein 2; Phosphodiesterase 4D-interacting protein;)
genome : 144,456,641 - 144,491,721 (35,081)
query : 1 - 850 (850/850)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 12, cyto_nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000535719 (
ENST00000437785
)
(Myomegalin; Phosphodiesterase 4D-interacting protein;)
genome : 144,456,645 - 144,520,983 (64,339)
query : 1 - 1,539 (1,539/1,539)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 2.5, cyto_nucl 2.5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000542433 (
ENST00000444499
)
(Myomegalin; Phosphodiesterase 4D-interacting protein;)
genome : 144,457,533 - 144,491,793 (34,261)
query : 1 - 894 (894/894)
6 exons
identity = 0.987
3'(1.000;1.000;0.894;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, extr 5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000554554 (
ENST00000456620
)
(Hypothetical short protein.)
genome : 144,460,626 - 144,461,412 (787)
query : 1 - 490 (490/490)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 8.66667, nucl 7, cyto 6,
cyto_pero 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000519889_02 (
ENST00000421955
)
(Myomegalin; Phosphodiesterase 4D-interacting protein;)
genome : 144,461,396 - 144,470,546 (9,151)
query : 1 - 375 (375/375)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 8, mito_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000537840_02 (
ENST00000439906
)
(Myomegalin; Phosphodiesterase 4D-interacting protein;)
genome : 144,461,397 - 144,470,546 (9,150)
query : 1 - 374 (374/374)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 9, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000550414_02 (
ENST00000452480
)
(Myomegalin; Phosphodiesterase 4D-interacting protein;)
genome : 144,461,397 - 144,470,546 (9,150)
query : 1 - 374 (374/374)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 9, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000526243 (
ENST00000428309
)
(Myomegalin; Cardiomyopathy-associated protein 2; Phosphodiesterase 4D-interacting protein;)
genome : 144,461,400 - 144,470,218 (8,819)
query : 1 - 454 (454/454)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000516908_02 (
ENST00000418974
)
(Myomegalin; Phosphodiesterase 4D-interacting protein;)
genome : 144,464,347 - 144,491,882 (27,536)
query : 1 - 769 (769/769)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11, cyto_nucl 9.33333, cyto 5.5,
cyto_pero 3.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000527430_02 (
ENST00000429496
)
(Myomegalin; Phosphodiesterase 4D-interacting protein;)
genome : 144,464,347 - 144,491,882 (27,536)
query : 1 - 769 (769/769)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11, cyto_nucl 9.33333, cyto 5.5,
cyto_pero 3.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000529862 (
ENST00000431928
)
(Hypothetical short protein.)
genome : 144,479,978 - 144,481,765 (1,788)
query : 1 - 1,063 (1,063/1,063)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000266240
(
BC089397
)
Representative transcript
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,480,747 - 144,521,969 (41,223)
query : 1 - 769 (769/793)
4 exons
identity = 0.997
3'(0.996;1.000;1.000;0.988)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 9, mito_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000509694 (
ENST00000411760
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,480,741 - 144,520,919 (40,179)
query : 1 - 737 (737/737)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 9.5, mito_nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000562747 (
NR_024584
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,480,744 - 144,521,969 (41,226)
query : 1 - 772 (772/772)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 9.5, mito_nucl 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000540443 (
ENST00000442509
)
(Conserved hypothetical protein.)
genome : 144,480,744 - 144,520,993 (40,250)
query : 1 - 1,242 (1,242/1,242)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0213994
HIT000555579_02 (
ENST00000457645
)
(Hypothetical protein.)
genome : 144,480,746 - 144,481,614 (869)
query : 1 - 554 (554/554)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 6, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213994)
HIX0213994
HIT000532093_02 (
ENST00000434159
)
(Hypothetical protein.)
genome : 144,480,753 - 144,481,509 (757)
query : 1 - 442 (442/442)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 12, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213994)
HIX0213994
HIT000555925_02 (
ENST00000457991
)
(Hypothetical protein.)
genome : 144,480,873 - 144,491,821 (10,949)
query : 1 - 603 (603/603)
3 exons
identity = 0.992
5'(1.000;1.000;0.966)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 12.5, extr 8, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213994)
HIX0029407
HIT000512278 (
ENST00000414344
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,481,555 - 144,521,271 (39,717)
query : 1 - 515 (515/515)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.5, extr 10, nucl 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000524720 (
ENST00000426786
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,481,627 - 144,521,970 (40,344)
query : 1 - 324 (324/324)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3, mito 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0000961
HIT000005226
(
AK021952
)
Representative transcript
(Conserved hypothetical protein.)
genome : 144,500,483 - 144,501,995 (1,513)
query : 1 - 1,513 (1,513/1,513)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000961)
HIX0029407
HIT000517039_02 (
ENST00000419105
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,505,208 - 144,520,841 (15,634)
query : 1 - 1,001 (1,001/1,001)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, extr 7, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0160712
HIT000526442_02 (
ENST00000428508
)
(Hypothetical short protein.)
genome : 144,505,752 - 144,506,762 (1,011)
query : 1 - 398 (398/398)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160712)
HIX0029407
HIT000531532_02 (
ENST00000433598
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,505,804 - 144,520,841 (15,038)
query : 1 - 405 (405/405)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, extr 7, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000533338_02 (
ENST00000435404
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,505,804 - 144,520,841 (15,038)
query : 1 - 405 (405/405)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, extr 7, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000542817_01 (
ENST00000444883
)
(Hypothetical short protein.)
genome : 144,506,091 - 144,516,503 (10,413)
query : 1 - 372 (372/372)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000509875 (
ENST00000411941
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,506,277 - 144,521,002 (14,726)
query : 1 - 389 (389/389)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 6.5, cyto 5.5, nucl 4.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0214322
HIT000706699_02 (
ENST00000594899
)
(Hypothetical short protein.)
genome : 144,509,530 - 144,510,016 (487)
query : 1 - 487 (487/487)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, cyto_nucl 4.33333, cyto 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214322)
HIX0029407
HIT000556196 (
ENST00000458262
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,516,419 - 144,520,983 (4,565)
query : 1 - 521 (521/521)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 4, cyto 3.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000019011_05
(
AK094156
)
(Hypothetical protein.)
genome : 144,516,419 - 144,519,720 (3,302)
query : 1 - 3,302 (3,302/3,302)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, mito_nucl 11.8333, mito 10.5,
cyto_nucl 8.33333, extr 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000550290_02 (
ENST00000452356
)
(Poly [ADP-ribose] polymerase 8 isoform 2.)
genome : 144,519,813 - 144,520,861 (1,049)
query : 1 - 143 (143/143)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 7.5, nucl 6.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0029407
HIT000393380
(
DQ786327
)
(Non-protein coding transcript.)
genome : 144,521,685 - 144,522,054 (370)
query : 1 - 370 (370/417)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029407)
HIX0023805
HIT000049323
(
AK130052
)
Representative transcript
(Conserved hypothetical protein.)
genome : 144,528,493 - 144,536,246 (7,754)
query : 1 - 2,225 (2,225/2,228)
2 exons
identity = 0.979
5'(0.991;0.811)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, extr 11, cyto_nucl 11, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023805)
HIX0160067
HIT000436729_06
(
DQ570198
)
Representative transcript
(Non-protein coding transcript.)
genome : 144,590,096 - 144,590,125 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160067)
HIX0000962
HIT000427544
(
AK308678
)
(Hypothetical protein.)
genome : 144,593,696 - 144,615,132 (21,437)
query : 3 - 910 (908/910)
6 exons
identity = 0.994
5'(0.993;0.996;1.000;1.000;0.987;1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 11, cyto_nucl 10, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000545468 (
ENST00000447534
)
(Conserved hypothetical protein.)
genome : 144,593,720 - 144,605,701 (11,982)
query : 1 - 2,644 (2,644/2,644)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 11, extr 8, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000537286 (
ENST00000439352
)
(Conserved hypothetical protein.)
genome : 144,593,736 - 144,597,070 (3,335)
query : 1 - 1,116 (1,116/1,116)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 7, cyto_pero 2.83333, cyto_nucl 2.66667,
cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000526299 (
ENST00000428365
)
(Conserved hypothetical protein.)
genome : 144,593,808 - 144,603,193 (9,386)
query : 1 - 703 (703/703)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 13, extr 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000517754 (
ENST00000419820
)
(Hypothetical protein.)
genome : 144,594,045 - 144,605,891 (11,847)
query : 1 - 3,056 (3,056/3,056)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 11, extr 8, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000265027
(
BC073801
)
(Neuroblastoma breakpoint family member 3; Protein AE2; Protein SHIIIa4;)
genome : 144,596,382 - 144,604,297 (7,916)
query : 1 - 1,527 (1,527/1,544)
3 exons
identity = 0.991
5'(0.989;1.000;0.990)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13.5, cyto 7.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000546161 (
ENST00000448227
)
(Non-protein coding transcript.)
genome : 144,598,614 - 144,606,278 (7,665)
query : 1 - 416 (416/416)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000535385 (
ENST00000437451
)
(Hypothetical protein.)
genome : 144,598,651 - 144,607,547 (8,897)
query : 1 - 725 (725/725)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 5.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0077424
HIT000398494 (
NR_003242
)
(Profilin family protein.)
genome : 144,610,815 - 144,612,727 (1,913)
query : 1 - 1,913 (1,913/1,913)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15, nucl 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077424)
HIX0077424
HIT000501208
(
BC137262
)
Representative transcript
(Profilin family protein.)
genome : 144,610,815 - 144,612,647 (1,833)
query : 1 - 1,833 (1,833/1,833)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR005454 : Profilin1/2/3, vertebrate
IPR005455 : Profilin
GO :
0003779 : Molecular Function : actin binding
0030036 : Biological Process : actin cytoskeleton organization
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077424)
HIX0077424
HIT000078113
(
AF345651
)
(Conserved hypothetical protein.)
genome : 144,610,999 - 144,612,307 (1,309)
query : 12 - 1,322 (1,311/1,338)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 14, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077424)
HIX0077424
HIT000580636 (
ENST00000476442
)
(Profilin family protein.)
genome : 144,612,266 - 144,612,683 (418)
query : 1 - 418 (418/418)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077424)
HIX0000962
HIT000546106 (
ENST00000448172
)
(Conserved hypothetical protein.)
genome : 144,614,532 - 144,619,419 (4,888)
query : 1 - 1,212 (1,212/1,212)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 13.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000332517_02
(
AY894567
)
Representative transcript
(Neuroblastoma breakpoint family (NBPF) domain containing protein.)
genome : 144,614,959 - 144,828,809 (213,851)
query : 2 - 2,759 (2,758/2,759)
18 exons
identity = 0.985
5'(0.997;0.995;1.000;0.991;1.000;0.951;0.995;
0.986;0.981;1.000;0.981;0.983;1.000;0.983;
1.000;0.994;0.972;0.944)3'
coverage = 1.000
InterPro :
IPR010630 : Neuroblastoma breakpoint family (NBPF) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_golg 9.5, nucl 8, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000426675_03
(
AK307809
)
(Neuroblastoma breakpoint family (NBPF) domain containing protein.)
genome : 144,615,179 - 144,822,072 (206,894)
query : 1 - 1,565 (1,565/1,565)
10 exons
identity = 0.987
5'(0.984;0.995;0.991;0.990;0.951;0.991;0.986;
0.981;0.981;0.993)3'
coverage = 1.000
InterPro :
IPR010630 : Neuroblastoma breakpoint family (NBPF) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 13, nucl 12, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0200129
HIT000659751 (
NR_037182
)
(Spindle associated domain containing protein.)
genome : 144,676,437 - 144,680,025 (3,589)
query : 1 - 870 (870/877)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 10, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200129)
HIX0200129
HIT000119706 (
ENST00000313342
)
(Spindle associated domain containing protein.)
genome : 144,676,874 - 144,679,969 (3,096)
query : 1 - 377 (377/377)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11, extr 9, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200129)
HIX0200129
HIT000691077 (
ENST00000579144
)
(Spindle associated domain containing protein.)
genome : 144,676,874 - 144,679,969 (3,096)
query : 1 - 377 (377/377)
3 exons
identity = 0.997
3'(1.000;0.992;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11, extr 9, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200129)
HIX0200215
HIT000632477_01 (
ENST00000533396
)
(Spindle associated domain containing protein.)
genome : 144,693,446 - 145,075,891 (382,446)
query : 1 - 825 (825/825)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12.5, cyto 11.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200215)
HIX0000962
HIT000587509 (
ENST00000483630
)
(Conserved hypothetical protein.)
genome : 144,811,748 - 144,815,261 (3,514)
query : 1 - 678 (678/678)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, extr 6, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000112135_03 (
ENST00000281815
)
(Neuroblastoma breakpoint family (NBPF) domain containing protein.)
genome : 144,813,742 - 144,830,300 (16,559)
query : 16 - 2,886 (2,871/2,886)
10 exons
identity = 0.993
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.756;1.000)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000570478 (
ENST00000465793
)
(Conserved hypothetical protein.)
genome : 144,814,560 - 144,816,049 (1,490)
query : 1 - 449 (449/449)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000576279 (
ENST00000471873
)
(Neuroblastoma breakpoint family (NBPF) domain containing protein.)
genome : 144,814,683 - 144,816,795 (2,113)
query : 1 - 765 (765/765)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000588641 (
ENST00000484811
)
(Neuroblastoma breakpoint family (NBPF) domain containing protein.)
genome : 144,815,811 - 144,816,677 (867)
query : 1 - 403 (403/403)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000019885
(
AK095030
)
(Neuroblastoma breakpoint family (NBPF) domain containing protein.)
genome : 144,820,976 - 144,827,865 (6,890)
query : 1 - 3,509 (3,509/3,509)
6 exons
identity = 0.993
5'(0.999;0.994;1.000;1.000;0.975;1.000)3'
coverage = 1.000
InterPro :
IPR010630 : Neuroblastoma breakpoint family (NBPF) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 12, cyto_nucl 10, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000592511 (
ENST00000488888
)
(Conserved hypothetical protein.)
genome : 144,820,976 - 144,827,865 (6,890)
query : 1 - 3,519 (3,519/3,519)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000078617_06
(
AF379632
)
(Neuroblastoma breakpoint family (NBPF) domain containing protein.)
genome : 144,827,071 - 145,325,305 (498,235)
query : 3 - 900 (898/900)
9 exons
identity = 0.994
5'(1.000;1.000;0.994;1.000;1.000;1.000;1.000;
0.961;0.982)3'
coverage = 0.998
InterPro :
IPR010630 : Neuroblastoma breakpoint family (NBPF) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, extr 9, cyto_nucl 9, mito 5, cyto 4.5,
extr_plas 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000091326
(
BC027348
)
(Hypothetical protein.)
genome : 144,828,876 - 144,830,302 (1,427)
query : 1 - 1,427 (1,427/1,441)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 3.5, cyto_nucl 3.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0019844
HIT000016560
(
AK091693
)
Representative transcript
(Conserved hypothetical protein.)
genome : 144,832,200 - 145,374,694 (542,495)
query : 1 - 2,607 (2,607/2,607)
2 exons
identity = 0.989
3'(0.987;0.991)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 3.5, mito 3, cyto_nucl 3, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019844)
HIX0019844
HIT000571001 (
ENST00000466343
)
(Conserved hypothetical protein.)
genome : 144,833,168 - 144,835,867 (2,700)
query : 1 - 869 (869/869)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019844)
HIX0019844
HIT000690722 (
ENST00000578784
)
(Hypothetical short protein.)
genome : 144,833,168 - 144,835,867 (2,700)
query : 1 - 869 (869/869)
2 exons
identity = 0.998
3'(0.998;0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019844)
HIX0213688
HIT000574181 (
ENST00000469668
)
(Conserved hypothetical protein.)
genome : 144,836,157 - 144,837,850 (1,694)
query : 1 - 735 (735/735)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto 8, cyto_nucl 8, nucl 6, mito_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000627250 (
ENST00000528060
)
(Hypothetical short protein.)
genome : 144,836,385 - 144,837,429 (1,045)
query : 1 - 625 (625/625)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto 8, cyto_nucl 8, nucl 6, mito_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000564972 (
ENST00000460027
)
(Hypothetical short protein.)
genome : 144,837,656 - 144,854,197 (16,542)
query : 1 - 368 (368/368)
3 exons
identity = 0.978
3'(1.000;0.930;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 9, cyto 3, golg 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000026997_03
(
AL832085
)
(Hypothetical protein.)
genome : 144,851,427 - 144,854,377 (2,951)
query : 1 - 2,951 (2,951/3,065)
1 exon
identity = 0.990
3'(0.990)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, nucl 7, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000003310
(
AK000835
)
(Conserved hypothetical protein.)
genome : 144,851,427 - 144,853,036 (1,610)
query : 1 - 1,610 (1,610/1,627)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 7, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000004859
(
AK021585
)
(Conserved hypothetical protein.)
genome : 144,851,428 - 144,853,538 (2,111)
query : 1 - 2,111 (2,111/2,111)
1 exon
identity = 0.991
3'(0.991)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, nucl 7, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000625396 (
ENST00000526182
)
(Hypothetical protein.)
genome : 144,852,299 - 144,853,294 (996)
query : 1 - 277 (277/277)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 9, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000623940 (
ENST00000524688
)
(Hypothetical short protein.)
genome : 144,852,394 - 144,852,925 (532)
query : 1 - 532 (532/558)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.953
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000632842 (
ENST00000533768
)
(Conserved hypothetical protein.)
genome : 144,854,367 - 144,857,016 (2,650)
query : 1 - 635 (635/635)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000633425 (
ENST00000534367
)
(Conserved hypothetical protein.)
genome : 144,855,771 - 144,857,849 (2,079)
query : 1 - 578 (578/578)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, cyto 3, cyto_nucl 2.83333,
cyto_pero 2.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000629282 (
ENST00000530130
)
(Conserved hypothetical protein.)
genome : 144,855,856 - 144,866,711 (10,856)
query : 1 - 927 (927/927)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000625872 (
ENST00000526664
)
(Conserved hypothetical protein.)
genome : 144,856,999 - 144,867,980 (10,982)
query : 1 - 546 (546/546)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 14, cyto 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000633524 (
ENST00000534466
)
(Conserved hypothetical protein.)
genome : 144,857,640 - 144,860,234 (2,595)
query : 1 - 565 (565/565)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, extr 6, nucl 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0203873
HIT000631248 (
ENST00000532137
)
(Hypothetical short protein.)
genome : 144,858,174 - 144,865,800 (7,627)
query : 1 - 554 (554/554)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 13, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203873)
HIX0203873
HIT000689988 (
ENST00000578041
)
(Hypothetical short protein.)
genome : 144,858,174 - 144,865,800 (7,627)
query : 1 - 554 (554/554)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 13, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203873)
HIX0203868
HIT000623762 (
ENST00000524505
)
(Hypothetical protein.)
genome : 144,858,211 - 144,858,781 (571)
query : 3 - 573 (571/573)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 7.66667, nucl 6.5, cyto 5.5,
cyto_pero 4.5, mito_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203868)
HIX0203868
HIT000693350 (
ENST00000581445
)
(Hypothetical protein.)
genome : 144,858,211 - 144,858,781 (571)
query : 3 - 573 (571/573)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 7.66667, nucl 6.5, cyto 5.5,
cyto_pero 4.5, mito_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203868)
HIX0213688
HIT000585205 (
ENST00000481227
)
(Conserved hypothetical protein.)
genome : 144,859,891 - 144,866,850 (6,960)
query : 1 - 802 (802/802)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 8, extr 4, cyto_pero 4, cyto_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000008180
(
AK024906
)
(Neuroblastoma breakpoint family (NBPF) domain containing protein.)
genome : 144,862,709 - 144,876,023 (13,315)
query : 1 - 2,545 (2,545/2,565)
7 exons
identity = 0.992
3'(0.991;1.000;0.985;0.996;0.993;0.996;1.000)5'
coverage = 1.000
InterPro :
IPR010630 : Neuroblastoma breakpoint family (NBPF) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16.5, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000583437 (
ENST00000479369
)
(Neuroblastoma breakpoint family (NBPF) domain containing protein.)
genome : 144,862,705 - 144,876,023 (13,319)
query : 1 - 2,548 (2,548/2,548)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15, cyto 9.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000627093 (
ENST00000527901
)
(Conserved hypothetical protein.)
genome : 144,863,400 - 144,866,137 (2,738)
query : 1 - 561 (561/561)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 4.5, mito 4, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000625107 (
ENST00000525886
)
(Conserved hypothetical protein.)
genome : 144,864,135 - 144,919,011 (54,877)
query : 1 - 483 (483/483)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 11.5, cyto 10.5, extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000598123 (
ENST00000494734
)
(Conserved hypothetical protein.)
genome : 144,864,883 - 144,866,678 (1,796)
query : 1 - 305 (305/305)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10, nucl 9, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0160120
HIT000459940_03
(
DQ593409
)
Representative transcript
(Non-protein coding transcript.)
genome : 144,866,405 - 144,866,434 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160120)
HIX0203872
HIT000630419 (
ENST00000531288
)
(Hypothetical short protein.)
genome : 144,874,945 - 144,878,163 (3,219)
query : 1 - 406 (406/406)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 10.5, mito 7, extr 5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203872)
HIX0203872
HIT000695385 (
ENST00000583504
)
(Conserved hypothetical protein.)
genome : 144,874,945 - 144,878,163 (3,219)
query : 1 - 406 (406/406)
3 exons
identity = 0.998
5'(1.000;0.986;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 7.5, cyto_nucl 6.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203872)
HIX0214050
HIT000689932_01 (
ENST00000577983
)
(Non-protein coding transcript.)
genome : 144,877,330 - 144,877,395 (66)
query : 1 - 66 (66/66)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214050)
HIX0214050
HIT000693604_01 (
ENST00000581702
)
(Non-protein coding transcript.)
genome : 144,877,330 - 144,877,395 (66)
query : 1 - 66 (66/66)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214050)
HIX0214050
HIT000694070_01 (
ENST00000582173
)
(Non-protein coding transcript.)
genome : 144,877,330 - 144,877,395 (66)
query : 1 - 66 (66/66)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214050)
HIX0214050
HIT000695179_01 (
ENST00000583298
)
(Non-protein coding transcript.)
genome : 144,877,330 - 144,877,395 (66)
query : 1 - 66 (66/66)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214050)
HIX0214241
HIT000629738 (
ENST00000530592
)
(Conserved hypothetical protein.)
genome : 144,880,801 - 144,882,701 (1,901)
query : 1 - 507 (507/507)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 6, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214241)
HIX0213688
HIT000265747
(
BC078660
)
(Conserved hypothetical protein.)
genome : 144,890,593 - 144,931,871 (41,279)
query : 1 - 5,183 (5,183/5,215)
19 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;0.969;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000436030
(
BC152439
)
Representative transcript
(Conserved hypothetical protein.)
genome : 144,890,593 - 144,932,365 (41,773)
query : 1 - 5,677 (5,677/5,706)
19 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;0.969;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000315655 (
NM_001002811
)
(Conserved hypothetical protein.)
genome : 144,890,591 - 144,932,032 (41,442)
query : 1 - 5,346 (5,346/5,355)
19 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.969;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 10.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000004093
(
AK001619
)
(Conserved hypothetical protein.)
genome : 144,890,591 - 144,921,903 (31,313)
query : 1 - 3,405 (3,405/3,405)
11 exons
identity = 0.991
3'(0.997;0.959;0.954;1.000;0.994;0.995;0.958;
1.000;0.991;0.994;0.986)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000572455 (
ENST00000467859
)
(Conserved hypothetical protein.)
genome : 144,890,591 - 144,921,903 (31,313)
query : 1 - 3,405 (3,405/3,405)
11 exons
identity = 0.995
3'(1.000;0.963;0.977;1.000;1.000;1.000;0.969;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.6667, cyto_golg 12.3333,
nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000594950 (
ENST00000491426
)
(Conserved hypothetical protein.)
genome : 144,890,592 - 144,904,679 (14,088)
query : 1 - 670 (670/670)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14.5, cyto 9, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000000194
(
AB007946
)
(Conserved hypothetical protein.)
genome : 144,890,594 - 144,932,365 (41,772)
query : 1 - 5,676 (5,676/5,676)
19 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;0.969;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000119740 (
ENST00000313431
)
(Conserved hypothetical protein.)
genome : 144,890,594 - 144,932,365 (41,772)
query : 1 - 5,676 (5,676/5,676)
19 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.969;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000390770
(
BC132717
)
(Conserved hypothetical protein.)
genome : 144,891,161 - 144,931,968 (40,808)
query : 1 - 4,712 (4,712/4,712)
19 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;0.994;1.000;0.969;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000633034 (
ENST00000533963
)
(Conserved hypothetical protein.)
genome : 144,892,240 - 144,894,287 (2,048)
query : 15 - 571 (557/571)
2 exons
identity = 0.996
3'(1.000;0.990)5'
coverage = 0.975
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000629097 (
ENST00000529945
)
(Conserved hypothetical protein.)
genome : 144,897,997 - 144,932,148 (34,152)
query : 1 - 8,824 (8,824/8,824)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.969;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000024334_03
(
AL080213
)
(Hypothetical short protein.)
genome : 144,898,781 - 144,901,419 (2,639)
query : 2 - 2,640 (2,639/2,652)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000583475 (
ENST00000479408
)
(Conserved hypothetical protein.)
genome : 144,902,728 - 144,932,552 (29,825)
query : 1 - 2,746 (2,746/2,746)
17 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.969;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.6667, cyto_golg 11.6667, nucl 7,
golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000006862_03
(
AK023588
)
(Hypothetical protein.)
genome : 144,905,439 - 144,907,258 (1,820)
query : 1 - 1,821 (1,821/1,821)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, cyto_nucl 9.83333, extr 9, cyto_pero 7.16667,
mito 6, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000599592 (
ENST00000496263
)
(Conserved hypothetical protein.)
genome : 144,916,705 - 144,922,065 (5,361)
query : 1 - 687 (687/687)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 9.5, cyto_nucl 7.5, nucl 4.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0213688
HIT000086406
(
BC004860
)
(Zinc finger, AD-type domain containing protein.)
genome : 144,917,600 - 144,932,032 (14,433)
query : 1 - 2,317 (2,317/2,352)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR012934 : Zinc finger, AD-type
GO :
0005634 : Cellular Component : nucleus
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 17, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213688)
HIX0200215
HIT000632919 (
ENST00000533845
)
(Spindle associated domain containing protein.)
genome : 144,946,702 - 144,994,925 (48,224)
query : 1 - 376 (376/376)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 6, mito 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200215)
HIX0200215
HIT000633592 (
ENST00000534536
)
(Spindle associated domain containing protein.)
genome : 144,946,711 - 144,995,082 (48,372)
query : 1 - 647 (647/647)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, cyto_mito 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200215)
HIX0200215
HIT000059333
(
AB042557
)
Representative transcript
(Spindle associated domain containing protein.)
genome : 144,951,760 - 144,994,909 (43,150)
query : 1 - 1,138 (1,138/1,160)
4 exons
identity = 0.991
3'(0.992;0.976;0.987;0.997)5'
coverage = 0.999
InterPro :
IPR012943 : Spindle associated
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 11, nucl 6, E.R._mito 6, cyto_pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200215)
HIX0200215
HIT000656023 (
NM_001195260
)
(Spindle associated domain containing protein.)
genome : 144,951,761 - 144,997,111 (45,351)
query : 1 - 957 (957/975)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11.5, extr 7, nucl 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200215)
HIX0200215
HIT000656024 (
NM_001195261
)
(Spindle associated domain containing protein.)
genome : 144,951,761 - 144,995,082 (43,322)
query : 1 - 1,055 (1,055/1,073)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13, cyto_mito 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200215)
HIX0200215
HIT000315654 (
NM_001002810
)
(Spindle associated domain containing protein.)
genome : 144,951,761 - 144,995,033 (43,273)
query : 1 - 1,260 (1,260/1,278)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200215)
HIX0200215
HIT000350627 (
ENST00000369347
)
(Spindle associated domain containing protein.)
genome : 144,951,760 - 144,994,909 (43,150)
query : 1 - 1,137 (1,137/1,137)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200215)
HIX0200215
HIT000582065 (
ENST00000477941
)
(Spindle associated domain containing protein.)
genome : 144,952,052 - 144,955,352 (3,301)
query : 1 - 586 (586/586)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11.5, extr 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200215)
HIX0200215
HIT000627317 (
ENST00000528129
)
(Spindle associated domain containing protein.)
genome : 144,952,109 - 144,995,049 (42,941)
query : 1 - 597 (597/597)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.5, cyto 7.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200215)
HIX0200215
HIT000625656 (
ENST00000526445
)
(Conserved hypothetical protein.)
genome : 144,952,132 - 144,994,925 (42,794)
query : 1 - 704 (704/704)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 11, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200215)
HIX0200215
HIT000568868 (
ENST00000464103
)
(Spindle associated domain containing protein.)
genome : 144,952,201 - 144,995,082 (42,882)
query : 1 - 615 (615/615)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13, cyto_mito 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200215)
HIX0200215
HIT000629621 (
ENST00000530472
)
(Spindle associated domain containing protein.)
genome : 144,952,201 - 144,994,925 (42,725)
query : 1 - 712 (712/712)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, mito 11, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200215)
HIX0000964
HIT000008199
(
AK024925
)
Representative transcript
(Conserved hypothetical protein.)
genome : 144,989,309 - 144,991,366 (2,058)
query : 1 - 2,054 (2,054/2,071)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11, mito 4, cyto 2, golg 2, E.R._mito 2,
mito_pero 2, cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000964)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000001151
Pan
sp. (Chimpanzee) : ENSPTRT00000002222
HIX0000964
HIT000691021 (
ENST00000579086
)
(Conserved hypothetical protein.)
genome : 144,989,309 - 144,991,365 (2,057)
query : 1 - 2,057 (2,057/2,057)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10, mito 4, cyto 2, golg 2, E.R._mito 2,
mito_pero 2, cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000964)
HIX0000964
HIT000695564 (
ENST00000583686
)
(Conserved hypothetical protein.)
genome : 144,989,309 - 144,991,365 (2,057)
query : 1 - 2,054 (2,054/2,054)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11, mito 4, cyto 2, golg 2, E.R._mito 2,
mito_pero 2, cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000964)
HIX0000964
HIT000708184 (
ENST00000596396
)
(Conserved hypothetical protein.)
genome : 144,989,309 - 144,991,365 (2,057)
query : 1 - 2,057 (2,057/2,057)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10, mito 4, cyto 2, golg 2, E.R._mito 2,
mito_pero 2, cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000964)
HIX0200215
HIT000596582 (
ENST00000493130
)
(Conserved hypothetical protein.)
genome : 145,013,831 - 145,039,771 (25,941)
query : 1 - 873 (873/873)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 12.5, nucl 10.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200215)
HIX0200215
HIT000582746 (
ENST00000478649
)
(Conserved hypothetical protein.)
genome : 145,015,684 - 145,039,786 (24,103)
query : 1 - 581 (581/581)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12.5, cyto 9.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200215)
HIX0200215
HIT000588886 (
ENST00000485062
)
(Conserved hypothetical protein.)
genome : 145,015,864 - 145,039,865 (24,002)
query : 1 - 572 (572/572)
4 exons
identity = 0.993
3'(1.000;0.958;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, extr 11, cyto_nucl 10, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200215)
HIX0200215
HIT000630078 (
ENST00000530940
)
(Conserved hypothetical protein.)
genome : 145,015,873 - 145,039,851 (23,979)
query : 1 - 576 (576/576)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, nucl 9, mito 9, mito_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200215)
HIX0029305
HIT000096377
(
BC040832
)
Representative transcript
(Conserved hypothetical protein.)
genome : 145,069,588 - 145,070,603 (1,016)
query : 1 - 1,016 (1,016/1,031)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 7.5, mito_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029305)
HIX0023693
HIT000044360
(
AK124487
)
Representative transcript
(Conserved hypothetical protein.)
genome : 145,071,314 - 145,073,772 (2,459)
query : 1 - 2,483 (2,483/2,483)
1 exon
identity = 0.985
3'(0.985)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023693)
HIX0200215
HIT000350625 (
ENST00000369345
)
(Conserved hypothetical protein.)
genome : 145,074,825 - 145,076,077 (1,253)
query : 1 - 684 (684/684)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, extr 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200215)
HIX0200215
HIT000067330
(
AF086451
)
(Conserved hypothetical protein.)
genome : 145,074,846 - 145,075,942 (1,097)
query : 2 - 529 (528/538)
2 exons
identity = 0.992
3'(0.986;0.997)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10.5, extr 10, cyto_nucl 10, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200215)
HIX0023504
HIT000551552 (
ENST00000453618
)
(Vesicle-trafficking protein SEC22b; ER-Golgi SNARE of 24 kDa; ERS-24; ERS24; SEC22 vesicle-trafficking protein homolog B; SEC22 vesicle-trafficking protein-like 1;)
genome : 145,096,220 - 145,116,922 (20,703)
query : 1 - 2,008 (2,008/2,008)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18.5, extr_plas 10.5, mito 7, cyto 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023504)
HIX0023504
HIT000201620 (
NM_004892
)
(Vesicle-trafficking protein SEC22b; ER-Golgi SNARE of 24 kDa; ERS-24; ERS24; SEC22 vesicle-trafficking protein homolog B; SEC22 vesicle-trafficking protein-like 1;)
genome : 145,096,407 - 145,116,997 (20,591)
query : 1 - 1,884 (1,884/1,892)
5 exons
identity = 0.985
5'(1.000;0.982;0.988;0.980;0.983)3'
coverage = 0.996
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, E.R._mito 7, mito_pero 6.5, mito 6,
cyto_nucl 6, E.R. 4.5, cyto_plas 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023504)
HIX0023504
HIT000689996 (
ENST00000578049
)
(Vesicle-trafficking protein SEC22b; ER-Golgi SNARE of 24 kDa; ERS-24; ERS24; SEC22 vesicle-trafficking protein homolog B; SEC22 vesicle-trafficking protein-like 1;)
genome : 145,096,407 - 145,116,987 (20,581)
query : 1 - 1,874 (1,874/1,874)
5 exons
identity = 0.985
5'(1.000;0.982;0.988;0.980;0.983)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, E.R._mito 7, mito_pero 6.5, mito 6,
cyto_nucl 6, E.R. 4.5, cyto_plas 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023504)
HIX0023504
HIT000422672
(
AK289875
)
(Vesicle-trafficking protein SEC22b; ER-Golgi SNARE of 24 kDa; ERS-24; ERS24; SEC22 vesicle-trafficking protein homolog B; SEC22 vesicle-trafficking protein-like 1;)
genome : 145,096,413 - 145,116,222 (19,810)
query : 1 - 1,116 (1,116/1,116)
5 exons
identity = 0.993
5'(1.000;1.000;0.994;0.986;0.990)3'
coverage = 1.000
InterPro :
IPR001388 : Synaptobrevin
IPR010908 : Longin domain
IPR011012 : Longin-like domain
GO :
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
0016192 : Biological Process : vesicle-mediated transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, E.R._mito 7, mito_pero 6.5, mito 6,
cyto_nucl 6, E.R. 4.5, cyto_plas 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023504)
HIX0023504
HIT000030350
(
BC001364
)
Representative transcript
(Vesicle-trafficking protein SEC22b; ER-Golgi SNARE of 24 kDa; ERS-24; ERS24; SEC22 vesicle-trafficking protein homolog B; SEC22 vesicle-trafficking protein-like 1;)
genome : 145,096,428 - 145,116,582 (20,155)
query : 1 - 1,444 (1,444/1,482)
5 exons
identity = 0.982
5'(1.000;0.991;0.988;0.980;0.975)3'
coverage = 1.000
InterPro :
IPR001388 : Synaptobrevin
IPR010908 : Longin domain
IPR011012 : Longin-like domain
GO :
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
0016192 : Biological Process : vesicle-mediated transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, E.R._mito 7, mito_pero 6.5, mito 6,
cyto_nucl 6, E.R. 4.5, cyto_plas 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023504)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK037918
Danio
sp. (Zebrafish) : BC055515
Rattus
sp. (Rat) : BC098725
Bos
sp. (Cow) : BC102342
Pongo
sp. (Orangutan) : CR859026
Gallus
sp. (Chicken) : ENSGALT00000004600
Oryzias
sp. (Medaka) : ENSORLT00000005147
Oryzias
sp. (Medaka) : ENSORLT00000010493
Tetraodon
sp. (Tetraodon) : GSTENT00012652001
Takifugu
sp. (Fugu) : SINFRUT00000127019
Macaca
sp. (Macaque) : XM_001114286
Monodelphis
sp. (Opossum) : XM_001363090
Equus
sp. (Horse) : XM_001501227
Canis
sp. (Dog) : XM_533025
Pan
sp. (Chimpanzee) : XR_021541
HIX0023504
HIT000001742
(
AF047442
)
(Vesicle-trafficking protein SEC22b; ER-Golgi SNARE of 24 kDa; ERS-24; ERS24; SEC22 vesicle-trafficking protein homolog B; SEC22 vesicle-trafficking protein-like 1;)
genome : 145,096,483 - 145,116,622 (20,140)
query : 1 - 1,433 (1,433/1,462)
5 exons
identity = 0.981
5'(1.000;0.991;0.988;0.980;0.976)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, E.R._mito 7, mito_pero 6.5, mito 6,
cyto_nucl 6, E.R. 4.5, cyto_plas 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023504)
HIX0023504
HIT000602276 (
ENST00000500203
)
(Conserved hypothetical protein.)
genome : 145,096,531 - 145,100,984 (4,454)
query : 1 - 439 (439/439)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 9, cyto 7.5, cyto_nucl 6.5,
cyto_pero 6.16667, mito_nucl 6.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023504)
HIX0023821
HIT000049701
(
AK130430
)
Representative transcript
(Conserved hypothetical protein.)
genome : 145,107,817 - 145,109,283 (1,467)
query : 1 - 1,463 (1,463/1,463)
1 exon
identity = 0.986
3'(0.986)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 14.5, nucl 12.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023821)
HIX0000966
HIT000006544
(
AK023270
)
Representative transcript
(Conserved hypothetical protein.)
genome : 145,113,535 - 145,115,628 (2,094)
query : 1 - 2,094 (2,094/2,094)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9, cyto_nucl 7.5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000966)
HIX0028595
HIT000663787_01 (
ENST00000549992
)
(Diphosphoinositol polyphosphate phosphohydrolase 2; DIPP-2; EC=3.6.1.52; Diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase 2; EC=3.6.1.-; Nucleoside diphosphate-linked moiety X motif 4; Nudix motif 4;)
genome : 145,136,123 - 145,139,470 (3,348)
query : 242 - 3,582 (3,341/3,607)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.930
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13.5, extr 5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028595)
HIX0028595
HIT000320784 (
NR_002212
)
(Diphosphoinositol polyphosphate phosphohydrolase 2 isoform beta.)
genome : 145,136,118 - 145,139,902 (3,785)
query : 1 - 3,785 (3,785/3,785)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.52
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028595)
HIX0028595
HIT000076998
(
AF311215
)
Representative transcript
(Diphosphoinositol polyphosphate phosphohydrolase 2; DIPP-2; EC=3.6.1.52; Diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase 2; EC=3.6.1.-; Nucleoside diphosphate-linked moiety X motif 4; Nudix motif 4;)
genome : 145,137,279 - 145,139,843 (2,565)
query : 1 - 2,566 (2,566/2,566)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
EC number :
EC 3.6.1.52
InterPro :
IPR000086 : NUDIX hydrolase domain
IPR015797 : NUDIX hydrolase domain-like
IPR020084 : NUDIX hydrolase, conserved site
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028595)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB174626
Rattus
sp. (Rat) : AF253473
Danio
sp. (Zebrafish) : AY423033
Bos
sp. (Cow) : ENSBTAT00000014324
Oryzias
sp. (Medaka) : ENSORLT00000016966
Tetraodon
sp. (Tetraodon) : GSTENT00034210001
HIX0028595
HIT000467358_03
(
DQ600827
)
(Non-protein coding transcript.)
genome : 145,137,994 - 145,138,023 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028595)
HIX0028595
HIT000690285_01 (
ENST00000578341
)
(Diphosphoinositol polyphosphate phosphohydrolase 2; DIPP-2; EC=3.6.1.52; Diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase 2; EC=3.6.1.-; Nucleoside diphosphate-linked moiety X motif 4; Nudix motif 4;)
genome : 145,138,568 - 145,139,613 (1,046)
query : 39 - 1,085 (1,047/1,085)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.965
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028595)
HIX0028595
HIT000695693_01 (
ENST00000583815
)
(Diphosphoinositol polyphosphate phosphohydrolase 2; DIPP-2; EC=3.6.1.52; Diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase 2; EC=3.6.1.-; Nucleoside diphosphate-linked moiety X motif 4; Nudix motif 4;)
genome : 145,138,568 - 145,139,613 (1,046)
query : 39 - 1,085 (1,047/1,085)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.965
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028595)
HIX0028595
HIT000123056 (
ENST00000322209
)
(Diphosphoinositol polyphosphate phosphohydrolase 2; DIPP-2; EC=3.6.1.52; Diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase 2; EC=3.6.1.-; Nucleoside diphosphate-linked moiety X motif 4; Nudix motif 4;)
genome : 145,139,025 - 145,139,569 (545)
query : 1 - 543 (543/543)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
EC number :
EC 3.6.1.52
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028595)
HIX0028595
HIT000314286_01 (
ENST00000360993
)
(Diphosphoinositol polyphosphate phosphohydrolase 2 isoform beta.)
genome : 145,139,027 - 145,139,567 (541)
query : 1 - 541 (541/541)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028595)
HIX0093883
HIT000393250
(
DQ786197
)
Representative transcript
(Conserved hypothetical protein.)
genome : 145,201,540 - 145,202,331 (792)
query : 1 - 793 (793/793)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0093883)
HIX0019918
HIT000005540
(
AK022266
)
Representative transcript
(Conserved hypothetical protein.)
genome : 145,203,964 - 145,206,091 (2,128)
query : 1 - 2,125 (2,125/2,125)
1 exon
identity = 0.991
3'(0.991)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11.5, mito 10, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019918)
HIX0203381
HIT000320069 (
NM_203458
)
(Notch homolog 2 N-terminal-like protein;)
genome : 145,209,111 - 145,285,912 (76,802)
query : 1 - 4,962 (4,962/4,962)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5.5, cyto_nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203381)
HIX0203381
HIT000690153 (
ENST00000578207
)
(Notch homolog 2 N-terminal-like protein;)
genome : 145,209,111 - 145,285,912 (76,802)
query : 1 - 4,968 (4,968/4,968)
5 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203381)
HIX0203381
HIT000315322 (
ENST00000362074
)
(Notch homolog 2 N-terminal-like protein;)
genome : 145,209,119 - 145,282,832 (73,714)
query : 1 - 1,874 (1,874/1,874)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203381)
HIX0203381
HIT000087447
(
BC010154
)
(Notch homolog 2 N-terminal-like protein;)
genome : 145,209,119 - 145,282,082 (72,964)
query : 1 - 1,124 (1,124/1,152)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5.5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203381)
HIX0203381
HIT000334305
(
BC090943
)
(Notch homolog 2 N-terminal-like protein;)
genome : 145,209,136 - 145,282,077 (72,942)
query : 13 - 1,095 (1,083/1,114)
5 exons
identity = 0.985
5'(0.950;1.000;1.000;0.997;1.000)3'
coverage = 0.989
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203381)
HIX0203381
HIT000705308 (
ENST00000593495
)
(Notch homolog 2 N-terminal-like protein;)
genome : 145,209,136 - 145,282,076 (72,941)
query : 1 - 1,082 (1,082/1,082)
5 exons
identity = 0.984
5'(0.950;1.000;0.996;0.997;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203381)
HIX0203381
HIT000038692
(
BC019835
)
(Notch homolog 2 N-terminal-like protein;)
genome : 145,209,142 - 145,282,077 (72,936)
query : 1 - 1,096 (1,096/1,110)
5 exons
identity = 0.998
5'(1.000;1.000;0.996;0.997;1.000)3'
coverage = 1.000
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5.5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203381)
HIX0203381
HIT000023202
(
AK098372
)
(Conserved hypothetical protein.)
genome : 145,209,145 - 145,239,382 (30,238)
query : 3 - 2,475 (2,473/2,475)
3 exons
identity = 0.974
5'(0.987;0.819;0.895)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 4, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203381)
HIX0203381
HIT000261782
(
BC065219
)
(Notch homolog 2 N-terminal-like protein;)
genome : 145,209,155 - 145,282,827 (73,673)
query : 1 - 1,827 (1,827/1,900)
5 exons
identity = 0.995
5'(0.979;1.000;0.996;0.997;0.999)3'
coverage = 1.000
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5.5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203381)
HIX0203381
HIT000266080
(
BC084572
)
(Notch homolog 2 N-terminal-like protein;)
genome : 145,209,165 - 145,282,077 (72,913)
query : 7 - 1,079 (1,073/1,096)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.994
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5.5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203381)
HIX0203381
HIT000054249
(
BX537434
)
Representative transcript
(Notch homolog 2 N-terminal-like protein;)
genome : 145,224,597 - 145,285,912 (61,316)
query : 2 - 5,034 (5,033/5,124)
6 exons
identity = 0.992
5'(1.000;0.990;1.000;1.000;1.000;0.991)3'
coverage = 1.000
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5.5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203381)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AB052936
Mus
sp. (Mouse) : D32210
Equus
sp. (Horse) : ENSECAT00000016738
Pongo
sp. (Orangutan) : ENSPPYT00000001153
Rattus
sp. (Rat) : M93661
HIX0203381
HIT000690135 (
ENST00000578189
)
(Notch homolog 2 N-terminal-like protein;)
genome : 145,224,597 - 145,285,911 (61,315)
query : 1 - 5,034 (5,034/5,034)
6 exons
identity = 0.993
5'(1.000;0.990;1.000;1.000;1.000;0.992)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203381)
HIX0203381
HIT000350620 (
ENST00000369340
)
(Notch homolog 2 N-terminal-like protein;)
genome : 145,224,599 - 145,285,912 (61,314)
query : 1 - 5,036 (5,036/5,036)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203381)
HIX0023755
HIT000047287
(
AK127414
)
Representative transcript
(Conserved hypothetical protein.)
genome : 145,251,811 - 145,253,764 (1,954)
query : 1 - 1,960 (1,960/1,960)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 7, nucl 4, cyto_mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023755)
HIX0000969
HIT000005282
(
AK022008
)
Representative transcript
(Conserved hypothetical protein.)
genome : 145,286,095 - 145,289,335 (3,241)
query : 1 - 3,241 (3,241/3,241)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 11, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000969)
HIX0160091
HIT000446054_04
(
DQ579523
)
Representative transcript
(Non-protein coding transcript.)
genome : 145,287,469 - 145,287,499 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160091)
HIX0160131
HIT000465940_04
(
DQ599409
)
Representative transcript
(Non-protein coding transcript.)
genome : 145,287,602 - 145,287,631 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160131)
HIX0029069
HIT000003362
(
AK000887
)
Representative transcript
(Conserved hypothetical protein.)
genome : 145,288,041 - 145,289,641 (1,601)
query : 1 - 1,601 (1,601/1,601)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, cyto_nucl 7.33333, cyto 6.5,
cyto_pero 4.83333, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029069)
HIX0214201
HIT000584036 (
ENST00000479995
)
(Hypothetical short protein.)
genome : 145,290,422 - 145,291,954 (1,533)
query : 1 - 260 (260/260)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 10, nucl 7.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214201)
HIX0000962
HIT000350507_04 (
ENST00000369227
)
(Neuroblastoma breakpoint family (NBPF) domain containing protein.)
genome : 145,293,361 - 145,370,198 (76,838)
query : 1 - 4,085 (4,085/4,085)
19 exons
identity = 0.989
5'(1.000;1.000;0.981;0.986;0.995;1.000;1.000;
0.981;0.983;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.981)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000366502_03 (
NM_001039703
)
(Neuroblastoma breakpoint family (NBPF) domain containing protein.)
genome : 145,293,371 - 145,368,684 (75,314)
query : 1 - 10,916 (10,916/10,916)
86 exons
identity = 0.996
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.965;0.988;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;0.962;0.994;1.000;0.994;1.000;1.000;
1.000;0.994;1.000;0.977;1.000;0.994;0.879;
0.994;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;0.981;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.977;1.000;0.960;1.000;
0.994;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 17, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000546966_07 (
ENST00000449032
)
(Neuroblastoma breakpoint family (NBPF) domain containing protein.)
genome : 145,296,407 - 145,368,780 (72,374)
query : 1 - 1,787 (1,787/1,787)
13 exons
identity = 0.983
5'(0.976;0.973;0.981;1.000;0.988;0.962;0.983;
1.000;0.988;1.000;1.000;0.964;0.976)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000095720
(
BC039454
)
(Neuroblastoma breakpoint family (NBPF) domain containing protein.)
genome : 145,297,939 - 145,299,058 (1,120)
query : 1 - 1,113 (1,113/1,128)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 1.000
InterPro :
IPR010630 : Neuroblastoma breakpoint family (NBPF) domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000135590 (
ENST00000342960
)
(Neuroblastoma breakpoint family (NBPF) domain containing protein.)
genome : 145,299,730 - 145,368,684 (68,955)
query : 813 - 10,697 (9,885/10,697)
79 exons
identity = 1.000
5'(0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.924
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000570521 (
ENST00000465839
)
(Neuroblastoma breakpoint family (NBPF) domain containing protein.)
genome : 145,301,720 - 145,330,855 (29,136)
query : 1 - 1,764 (1,764/1,764)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 15.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000078644_10
(
AF380582
)
(Neuroblastoma breakpoint family (NBPF) domain containing protein.)
genome : 145,313,330 - 145,315,836 (2,507)
query : 2 - 449 (448/449)
4 exons
identity = 0.996
5'(0.989;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR010630 : Neuroblastoma breakpoint family (NBPF) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000024019_02
(
AL050141
)
(Neuroblastoma breakpoint family (NBPF) domain containing protein.)
genome : 145,314,092 - 145,320,557 (6,466)
query : 1 - 2,354 (2,354/2,370)
7 exons
identity = 0.993
5'(0.990;1.000;0.994;0.995;1.000;0.994;1.000)3'
coverage = 1.000
InterPro :
IPR010630 : Neuroblastoma breakpoint family (NBPF) domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, nucl 8.5, mito_nucl 7, mito 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0000962
HIT000078619_03
(
AF379634
)
(Neuroblastoma breakpoint family member 10.)
genome : 145,327,569 - 145,368,785 (41,217)
query : 1 - 550 (550/567)
3 exons
identity = 0.998
5'(1.000;0.991;1.000)3'
coverage = 1.000
InterPro :
IPR010630 : Neuroblastoma breakpoint family (NBPF) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13.5, cyto 10.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000962)
HIX0160503
HIT000519871 (
ENST00000421937
)
(Conserved hypothetical protein.)
genome : 145,373,054 - 145,375,672 (2,619)
query : 1 - 784 (784/784)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160503)
HIX0160503
HIT000694646 (
ENST00000582756
)
(Conserved hypothetical protein.)
genome : 145,373,054 - 145,375,672 (2,619)
query : 1 - 784 (784/784)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160503)
HIX0159820
HIT000531015 (
ENST00000433081
)
(Hypothetical short protein.)
genome : 145,376,125 - 145,382,397 (6,273)
query : 1 - 814 (814/814)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159820)
HIX0159820
HIT000550817 (
ENST00000452883
)
(Hypothetical short protein.)
genome : 145,376,167 - 145,377,772 (1,606)
query : 1 - 648 (648/648)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 12.5, cyto_nucl 10, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159820)
HIX0159820
HIT000517751 (
ENST00000419817
)
(Hypothetical short protein.)
genome : 145,376,327 - 145,382,362 (6,036)
query : 1 - 872 (872/872)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 11.5, cyto 10, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159820)
HIX0159820
HIT000555399 (
ENST00000457465
)
(Hypothetical short protein.)
genome : 145,377,066 - 145,378,049 (984)
query : 1 - 372 (372/372)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, mito 9, extr 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159820)
HIX0117148
HIT000464647
(
DQ598116
)
Representative transcript
(Non-protein coding transcript.)
genome : 145,393,274 - 145,393,304 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117148)
HIX0000970
HIT000311634 (
ENST00000357836
)
(Hemojuvelin isoform b.)
genome : 145,413,095 - 145,417,543 (4,449)
query : 1 - 2,123 (2,123/2,123)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9, nucl 7.5, cyto_nucl 7.5, cyto 6.5,
E.R._mito 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000692733 (
ENST00000580823
)
(Hemojuvelin isoform b.)
genome : 145,413,095 - 145,417,543 (4,449)
query : 1 - 2,123 (2,123/2,123)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9, nucl 7.5, cyto_nucl 7.5, cyto 6.5,
E.R._mito 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000213183 (
NM_145277
)
(Hemojuvelin isoform b.)
genome : 145,413,191 - 145,417,545 (4,355)
query : 1 - 2,029 (2,029/2,048)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9, nucl 7.5, cyto_nucl 7.5, cyto 6.5,
E.R._mito 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000319933 (
NM_202004
)
(Hemojuvelin; Hemochromatosis type 2 protein; RGM domain family member C; Precursor;)
genome : 145,413,191 - 145,417,545 (4,355)
query : 1 - 1,506 (1,506/1,525)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20.5, extr_plas 11, mito 6, nucl 3, mito_pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000320591 (
NM_213652
)
(Hemojuvelin isoform c.)
genome : 145,413,191 - 145,417,545 (4,355)
query : 1 - 1,469 (1,469/1,488)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20.5, extr_plas 11, mito 6, nucl 3, mito_pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000320592 (
NM_213653
)
(Hemojuvelin; Hemochromatosis type 2 protein; RGM domain family member C; Precursor;)
genome : 145,413,191 - 145,417,545 (4,355)
query : 1 - 2,215 (2,215/2,234)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000331355
(
AK223575
)
(Hemojuvelin isoform b.)
genome : 145,413,271 - 145,417,543 (4,273)
query : 1 - 1,948 (1,948/1,981)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR009496 : Repulsive guidance molecule, C-terminal
IPR010536 : Repulsive guidance molecule, N-terminal
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9, nucl 7.5, cyto_nucl 7.5, cyto 6.5,
E.R._mito 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000038199
(
BC017926
)
(Hemojuvelin; Hemochromatosis type 2 protein; RGM domain family member C; Precursor;)
genome : 145,413,278 - 145,417,543 (4,266)
query : 1 - 1,417 (1,417/1,446)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR009496 : Repulsive guidance molecule, C-terminal
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20.5, extr_plas 11, mito 6, nucl 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000130214 (
ENST00000336751
)
(Hemojuvelin; Hemochromatosis type 2 protein; RGM domain family member C; Precursor;)
genome : 145,413,278 - 145,417,545 (4,268)
query : 1 - 2,128 (2,128/2,128)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000600644 (
ENST00000497365
)
(Hemojuvelin; Hemochromatosis type 2 protein; RGM domain family member C; Precursor;)
genome : 145,413,278 - 145,417,545 (4,268)
query : 1 - 1,419 (1,419/1,419)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20.5, extr_plas 11, mito 6, nucl 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000691352 (
ENST00000579423
)
(Hemojuvelin; Hemochromatosis type 2 protein; RGM domain family member C; Precursor;)
genome : 145,413,278 - 145,417,545 (4,268)
query : 1 - 2,128 (2,128/2,128)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000692603 (
ENST00000580693
)
(Hemojuvelin; Hemochromatosis type 2 protein; RGM domain family member C; Precursor;)
genome : 145,413,278 - 145,417,545 (4,268)
query : 1 - 1,419 (1,419/1,419)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20.5, extr_plas 11, mito 6, nucl 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000017549
(
AK092682
)
(Hemojuvelin isoform b.)
genome : 145,413,278 - 145,417,542 (4,265)
query : 1 - 1,936 (1,936/1,936)
3 exons
identity = 0.997
5'(1.000;0.995;0.998)3'
coverage = 1.000
InterPro :
IPR009496 : Repulsive guidance molecule, C-terminal
IPR010536 : Repulsive guidance molecule, N-terminal
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9, nucl 7.5, cyto_nucl 7.5, cyto 6.5,
E.R._mito 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000434718
(
AK315852
)
(Hemojuvelin isoform b.)
genome : 145,413,278 - 145,417,105 (3,828)
query : 1 - 1,502 (1,502/1,502)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009496 : Repulsive guidance molecule, C-terminal
IPR010536 : Repulsive guidance molecule, N-terminal
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9, nucl 7.5, cyto_nucl 7.5, cyto 6.5,
E.R._mito 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000519756 (
ENST00000421822
)
(Hemojuvelin; Hemochromatosis type 2 protein; RGM domain family member C; Precursor;)
genome : 145,413,278 - 145,415,461 (2,184)
query : 1 - 536 (536/536)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000695438 (
ENST00000583557
)
(Hemojuvelin; Hemochromatosis type 2 protein; RGM domain family member C; Precursor;)
genome : 145,413,278 - 145,415,461 (2,184)
query : 1 - 536 (536/536)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000021760
(
AK096905
)
(Hemojuvelin isoform c.)
genome : 145,413,279 - 145,417,545 (4,267)
query : 1 - 1,381 (1,381/1,381)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
InterPro :
IPR009496 : Repulsive guidance molecule, C-terminal
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20.5, extr_plas 11, mito 6, nucl 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000580022 (
ENST00000475797
)
(Hemojuvelin isoform c.)
genome : 145,413,279 - 145,417,545 (4,267)
query : 1 - 1,381 (1,381/1,381)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20.5, extr_plas 11, mito 6, nucl 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000689473 (
ENST00000577520
)
(Hemojuvelin isoform c.)
genome : 145,413,279 - 145,417,545 (4,267)
query : 1 - 1,381 (1,381/1,381)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20.5, extr_plas 11, mito 6, nucl 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000423628
(
AK290831
)
(Hemojuvelin isoform b.)
genome : 145,413,279 - 145,417,023 (3,745)
query : 1 - 1,419 (1,419/1,419)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009496 : Repulsive guidance molecule, C-terminal
IPR010536 : Repulsive guidance molecule, N-terminal
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9, nucl 7.5, cyto_nucl 7.5, cyto 6.5,
E.R._mito 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000425539
(
AK292742
)
(Hemojuvelin; Hemochromatosis type 2 protein; RGM domain family member C; Precursor;)
genome : 145,413,281 - 145,417,387 (4,107)
query : 1 - 1,967 (1,967/1,967)
4 exons
identity = 0.999
5'(1.000;1.000;0.996;1.000)3'
coverage = 1.000
InterPro :
IPR009496 : Repulsive guidance molecule, C-terminal
IPR010536 : Repulsive guidance molecule, N-terminal
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000017559
(
AK092692
)
(Hemojuvelin; Hemochromatosis type 2 protein; RGM domain family member C; Precursor;)
genome : 145,413,307 - 145,417,545 (4,239)
query : 1 - 1,390 (1,390/1,390)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009496 : Repulsive guidance molecule, C-terminal
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20.5, extr_plas 11, mito 6, nucl 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000044146
(
AK124273
)
Representative transcript
(Hemojuvelin; Hemochromatosis type 2 protein; RGM domain family member C; Precursor;)
genome : 145,413,307 - 145,417,542 (4,236)
query : 1 - 2,096 (2,096/2,096)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009496 : Repulsive guidance molecule, C-terminal
IPR010536 : Repulsive guidance molecule, N-terminal
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : BC089203
Danio
sp. (Zebrafish) : BC112964
Tetraodon
sp. (Tetraodon) : CR659401
Pongo
sp. (Orangutan) : CR857504
Oryzias
sp. (Medaka) : ENSORLT00000021050
Takifugu
sp. (Fugu) : SINFRUT00000138308
Macaca
sp. (Macaque) : XM_001092987
Canis
sp. (Dog) : XM_533038
Bos
sp. (Cow) : XM_589838
Pan
sp. (Chimpanzee) : XR_020865
Monodelphis
sp. (Opossum) : XR_030310
HIX0000970
HIT000266109
(
BC085604
)
(Hemojuvelin isoform b.)
genome : 145,413,338 - 145,417,545 (4,208)
query : 1 - 1,882 (1,882/1,901)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR009496 : Repulsive guidance molecule, C-terminal
IPR010536 : Repulsive guidance molecule, N-terminal
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9, nucl 7.5, cyto_nucl 7.5, cyto 6.5,
E.R._mito 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0000970
HIT000253320
(
AY372521
)
(Hemojuvelin; Hemochromatosis type 2 protein; RGM domain family member C; Precursor;)
genome : 145,414,782 - 145,416,936 (2,155)
query : 1 - 1,281 (1,281/1,281)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009496 : Repulsive guidance molecule, C-terminal
IPR010536 : Repulsive guidance molecule, N-terminal
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000970)
HIX0023624
HIT000203068 (
NM_006472
)
(Thioredoxin-interacting protein; Thioredoxin-binding protein 2; Vitamin D3 up-regulated protein 1;)
genome : 145,438,462 - 145,442,627 (4,166)
query : 1 - 2,926 (2,926/2,953)
8 exons
identity = 1.000
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14, nucl 7, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023624)
HIX0023624
HIT000350597 (
ENST00000369317
)
(Thioredoxin-interacting protein; Thioredoxin-binding protein 2; Vitamin D3 up-regulated protein 1;)
genome : 145,438,469 - 145,442,635 (4,167)
query : 1 - 2,927 (2,927/2,927)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14, nucl 7, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023624)
HIX0023624
HIT000054608
(
BX537824
)
(Thioredoxin-interacting protein.)
genome : 145,438,490 - 145,442,627 (4,138)
query : 1 - 2,332 (2,332/2,350)
5 exons
identity = 0.996
5'(0.996;0.919;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 9, cyto_nucl 6.33333, cyto 4.5,
E.R._mito 4.5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023624)
HIX0023624
HIT000495827
(
AK301203
)
(Thioredoxin-interacting protein;)
genome : 145,438,490 - 145,442,130 (3,641)
query : 1 - 1,573 (1,573/1,573)
4 exons
identity = 0.997
5'(0.995;0.989;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13.5, cyto 11.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023624)
HIX0023624
HIT000579427 (
ENST00000475171
)
(Hypothetical short protein.)
genome : 145,438,511 - 145,442,592 (4,082)
query : 1 - 1,683 (1,683/1,683)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 10.5, mito_pero 6, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023624)
HIX0023624
HIT000385220
(
AK226090
)
Representative transcript
(Thioredoxin-interacting protein; Thioredoxin-binding protein 2; Vitamin D3 up-regulated protein 1;)
genome : 145,438,526 - 145,441,738 (3,213)
query : 1 - 1,973 (1,973/1,988)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;0.990;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR011021 : Arrestin-like, N-terminal
IPR011022 : Arrestin C-terminal-like domain
IPR014756 : Immunoglobulin E-set
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14, nucl 7, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023624)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB062986
Mus
sp. (Mouse) : AK089403
Danio
sp. (Zebrafish) : BC049493
Rattus
sp. (Rat) : BC088411
Bos
sp. (Cow) : BC153252
Tetraodon
sp. (Tetraodon) : CR733825
Pongo
sp. (Orangutan) : CR859944
Monodelphis
sp. (Opossum) : ENSMODT00000023797
Oryzias
sp. (Medaka) : ENSORLT00000013654
Takifugu
sp. (Fugu) : SINFRUT00000141728
Canis
sp. (Dog) : XM_533037
Pan
sp. (Chimpanzee) : XR_022047
HIX0023624
HIT000216486
(
S73591
)
(Thioredoxin-interacting protein; Thioredoxin-binding protein 2; Vitamin D3 up-regulated protein 1;)
genome : 145,438,582 - 145,442,523 (3,942)
query : 1 - 2,701 (2,701/2,704)
8 exons
identity = 0.996
5'(0.998;1.000;1.000;0.990;1.000;1.000;0.993;
0.994)3'
coverage = 0.999
InterPro :
IPR011021 : Arrestin-like, N-terminal
IPR011022 : Arrestin C-terminal-like domain
IPR014756 : Immunoglobulin E-set
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 14, nucl 6, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023624)
HIX0023624
HIT000694293 (
ENST00000582401
)
(Thioredoxin-interacting protein; Thioredoxin-binding protein 2; Vitamin D3 up-regulated protein 1;)
genome : 145,438,582 - 145,442,525 (3,944)
query : 1 - 2,703 (2,703/2,703)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14, nucl 7, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023624)
HIX0023624
HIT000334677
(
BC093702
)
(Thioredoxin-interacting protein; Thioredoxin-binding protein 2; Vitamin D3 up-regulated protein 1;)
genome : 145,438,729 - 145,441,241 (2,513)
query : 1 - 1,272 (1,272/1,272)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.983)3'
coverage = 1.000
InterPro :
IPR011021 : Arrestin-like, N-terminal
IPR011022 : Arrestin C-terminal-like domain
IPR014756 : Immunoglobulin E-set
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14, nucl 7, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023624)
HIX0023624
HIT000334679
(
BC093704
)
(Thioredoxin-interacting protein; Thioredoxin-binding protein 2; Vitamin D3 up-regulated protein 1;)
genome : 145,438,729 - 145,441,239 (2,511)
query : 1 - 1,271 (1,271/1,271)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR011021 : Arrestin-like, N-terminal
IPR011022 : Arrestin C-terminal-like domain
IPR014756 : Immunoglobulin E-set
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14, nucl 7, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023624)
HIX0023624
HIT000255661
(
AY594328
)
(Thioredoxin-interacting protein; Thioredoxin-binding protein 2; Vitamin D3 up-regulated protein 1;)
genome : 145,438,803 - 145,441,217 (2,415)
query : 1 - 1,175 (1,175/1,175)
8 exons
identity = 0.998
5'(0.996;1.000;1.000;1.000;1.000;1.000;0.993;
1.000)3'
coverage = 1.000
InterPro :
IPR011021 : Arrestin-like, N-terminal
IPR011022 : Arrestin C-terminal-like domain
IPR014756 : Immunoglobulin E-set
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 14, nucl 6, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023624)
HIX0023624
HIT000090936
(
BC024305
)
(Thioredoxin-interacting protein.)
genome : 145,438,909 - 145,442,627 (3,719)
query : 1 - 2,479 (2,479/2,506)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;0.990;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR011021 : Arrestin-like, N-terminal
IPR011022 : Arrestin C-terminal-like domain
IPR014756 : Immunoglobulin E-set
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 6, E.R._mito 4.5, nucl 2, cyto 2,
cyto_nucl 2, pero 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023624)
HIX0023624
HIT000495772
(
AK301148
)
(Thioredoxin-interacting protein.)
genome : 145,438,916 - 145,441,508 (2,593)
query : 1 - 1,353 (1,353/1,353)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR011021 : Arrestin-like, N-terminal
IPR011022 : Arrestin C-terminal-like domain
IPR014756 : Immunoglobulin E-set
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, extr 12, mito_pero 7.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023624)
HIX0023624
HIT000523068 (
ENST00000425134
)
(Thioredoxin-interacting protein.)
genome : 145,439,306 - 145,440,992 (1,687)
query : 1 - 1,116 (1,116/1,116)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 11.5, mito_pero 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023624)
HIX0023624
HIT000499294
(
AK304670
)
(Thioredoxin-interacting protein.)
genome : 145,439,347 - 145,441,230 (1,884)
query : 1 - 1,184 (1,184/1,184)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011021 : Arrestin-like, N-terminal
IPR011022 : Arrestin C-terminal-like domain
IPR014756 : Immunoglobulin E-set
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 13.5, mito_pero 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023624)
HIX0023624
HIT000592183 (
ENST00000488537
)
(Thioredoxin-interacting protein.)
genome : 145,439,815 - 145,441,548 (1,734)
query : 1 - 1,509 (1,509/1,509)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 10, cyto 8.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023624)
HIX0023624
HIT000590343 (
ENST00000486597
)
(Thioredoxin-interacting protein.)
genome : 145,440,853 - 145,441,490 (638)
query : 1 - 509 (509/509)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 4, mito 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023624)
HIX0000971
HIT000099192
(
BC050418
)
(Conserved hypothetical protein.)
genome : 145,456,236 - 145,470,388 (14,153)
query : 1 - 1,605 (1,605/1,674)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, extr 12, cyto_nucl 9.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000971)
HIX0000971
HIT000031882
(
BC004355
)
Representative transcript
(DNA-directed RNA polymerase III subunit RPC7-like; RNA polymerase III subunit C7-like; DNA-directed RNA polymerase III subunit G-like;)
genome : 145,456,236 - 145,470,387 (14,152)
query : 1 - 1,165 (1,165/1,191)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
InterPro :
IPR024661 : DNA-directed RNA polymerase III, subunit Rpc31
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 6, nucl 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000971)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK008069
Danio
sp. (Zebrafish) : BC081380
Danio
sp. (Zebrafish) : BC083309
Bos
sp. (Cow) : BC114765
Tetraodon
sp. (Tetraodon) : CR682034
Monodelphis
sp. (Opossum) : ENSMODT00000023796
Takifugu
sp. (Fugu) : SINFRUT00000138352
Rattus
sp. (Rat) : XM_001062895
Macaca
sp. (Macaque) : XM_001090983
Equus
sp. (Horse) : XM_001916394
Pan
sp. (Chimpanzee) : XM_514421
Canis
sp. (Dog) : XM_845347
HIX0000971
HIT000210536 (
NM_032305
)
(DNA-directed RNA polymerase III subunit RPC7-like; RNA polymerase III subunit C7-like; DNA-directed RNA polymerase III subunit G-like;)
genome : 145,456,236 - 145,470,387 (14,152)
query : 1 - 1,165 (1,165/1,191)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 6, nucl 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000971)
HIX0000971
HIT000544506 (
ENST00000446572
)
(DNA-directed RNA polymerase III subunit RPC7-like; RNA polymerase III subunit C7-like; DNA-directed RNA polymerase III subunit G-like;)
genome : 145,456,236 - 145,470,388 (14,153)
query : 1 - 1,603 (1,603/1,603)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, extr 12, cyto_nucl 9.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000971)
HIX0000971
HIT000350594 (
ENST00000369314
)
(DNA-directed RNA polymerase III subunit RPC7-like; RNA polymerase III subunit C7-like; DNA-directed RNA polymerase III subunit G-like;)
genome : 145,456,236 - 145,470,387 (14,152)
query : 1 - 1,165 (1,165/1,165)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 6, nucl 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000971)
HIX0000971
HIT000695075 (
ENST00000583194
)
(DNA-directed RNA polymerase III subunit RPC7-like; RNA polymerase III subunit C7-like; DNA-directed RNA polymerase III subunit G-like;)
genome : 145,456,236 - 145,470,387 (14,152)
query : 1 - 1,165 (1,165/1,165)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 6, nucl 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000971)
HIX0000971
HIT000013598
(
AK056984
)
(DNA-directed RNA polymerase III subunit RPC7-like; RNA polymerase III subunit C7-like; DNA-directed RNA polymerase III subunit G-like;)
genome : 145,456,236 - 145,470,375 (14,140)
query : 1 - 1,153 (1,153/1,153)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR024661 : DNA-directed RNA polymerase III, subunit Rpc31
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 6, nucl 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000971)
HIX0000971
HIT000017076
(
AK092209
)
(Conserved hypothetical protein.)
genome : 145,456,236 - 145,470,364 (14,129)
query : 1 - 1,579 (1,579/1,579)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, extr 12, cyto_nucl 9.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000971)
HIX0000971
HIT000350593 (
ENST00000369313
)
(DNA-directed RNA polymerase III subunit RPC7-like; RNA polymerase III subunit C7-like; DNA-directed RNA polymerase III subunit G-like;)
genome : 145,456,514 - 145,470,387 (13,874)
query : 1 - 818 (818/818)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 7, cyto 7, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000971)
HIX0000971
HIT000576118 (
ENST00000471706
)
(DNA-directed RNA polymerase III subunit RPC7-like; RNA polymerase III subunit C7-like; DNA-directed RNA polymerase III subunit G-like;)
genome : 145,456,565 - 145,470,374 (13,810)
query : 1 - 755 (755/755)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 11.5, extr 9, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000971)
HIX0000971
HIT000436190
(
DQ418461
)
(DNA-directed RNA polymerase III subunit RPC7-like; RNA polymerase III subunit C7-like; DNA-directed RNA polymerase III subunit G-like;)
genome : 145,456,637 - 145,460,222 (3,586)
query : 1 - 657 (657/657)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR024661 : DNA-directed RNA polymerase III, subunit Rpc31
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 6, nucl 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000971)
HIX0199901
HIT000047923
(
AK128050
)
Representative transcript
(Ankyrin repeat domain-containing protein 34A;)
genome : 145,470,508 - 145,475,647 (5,140)
query : 1 - 3,608 (3,608/3,608)
4 exons
identity = 0.998
5'(1.000;1.000;0.989;0.999)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199901)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : BC091343
Equus
sp. (Horse) : ENSECAT00000002323
Pongo
sp. (Orangutan) : ENSPPYT00000001117
Tetraodon
sp. (Tetraodon) : GSTENT00011543001
Takifugu
sp. (Fugu) : SINFRUT00000181155
Monodelphis
sp. (Opossum) : XM_001363990
Canis
sp. (Dog) : XM_533036
Bos
sp. (Cow) : XM_580309
Pan
sp. (Chimpanzee) : XR_021857
HIX0199901
HIT000366582 (
NM_001039888
)
(Ankyrin repeat domain-containing protein 34A;)
genome : 145,470,508 - 145,475,647 (5,140)
query : 1 - 3,612 (3,612/3,612)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199901)
HIX0199901
HIT000696087 (
ENST00000584215
)
(Ankyrin repeat domain-containing protein 34A;)
genome : 145,470,508 - 145,475,647 (5,140)
query : 1 - 3,614 (3,614/3,614)
4 exons
identity = 0.999
5'(1.000;1.000;0.993;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199901)
HIX0199901
HIT000123474 (
ENST00000323397
)
(Ankyrin repeat domain-containing protein 34A;)
genome : 145,470,508 - 145,475,646 (5,139)
query : 1 - 3,611 (3,611/3,611)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199901)
HIX0199901
HIT000019137
(
AK094282
)
(Ankyrin repeat domain-containing protein 34A;)
genome : 145,472,592 - 145,475,647 (3,056)
query : 1 - 2,515 (2,515/2,515)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199901)
HIX0199901
HIT000026350
(
AL359622
)
(Ankyrin repeat domain-containing protein 34A.)
genome : 145,474,354 - 145,475,643 (1,290)
query : 1 - 1,290 (1,290/1,381)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199901)
HIX0159734
HIT000712084 (
ENST00000600340
)
(Hypothetical short protein.)
genome : 145,475,982 - 145,507,857 (31,876)
query : 1 - 692 (692/692)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000712157 (
ENST00000600413
)
(Hypothetical short protein.)
genome : 145,475,982 - 145,507,857 (31,876)
query : 1 - 692 (692/692)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0023573
HIT000048606
(
AK128733
)
(Conserved hypothetical protein.)
genome : 145,477,067 - 145,501,669 (24,603)
query : 1 - 3,834 (3,834/3,834)
6 exons
identity = 0.995
5'(0.946;0.994;1.000;1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 12, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023573)
HIX0023573
HIT000690596 (
ENST00000578657
)
(LIX1-like protein;)
genome : 145,477,067 - 145,501,669 (24,603)
query : 1 - 3,830 (3,830/3,830)
6 exons
identity = 0.994
5'(0.936;0.994;1.000;1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 6.83333, cyto 6.5,
cyto_pero 5.16667, nucl 5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023573)
HIX0023573
HIT000350588 (
ENST00000369308
)
(LIX1-like protein;)
genome : 145,477,085 - 145,501,669 (24,585)
query : 1 - 3,979 (3,979/3,979)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, mito 9, cyto 6, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023573)
HIX0023573
HIT000051490
(
BC035727
)
Representative transcript
(LIX1-like protein;)
genome : 145,477,085 - 145,499,091 (22,007)
query : 1 - 1,401 (1,401/1,467)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029270 : Limb expression 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, mito 9, cyto 6, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023573)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK143438
Rattus
sp. (Rat) : BC087077
Bos
sp. (Cow) : BC133629
Equus
sp. (Horse) : ENSECAT00000022019
Macaca
sp. (Macaque) : ENSMMUT00000022573
Oryzias
sp. (Medaka) : ENSORLT00000003793
Pongo
sp. (Orangutan) : ENSPPYT00000001118
Tetraodon
sp. (Tetraodon) : GSTENT00017380001
Danio
sp. (Zebrafish) : NM_001126439
Takifugu
sp. (Fugu) : SINFRUT00000127628
Monodelphis
sp. (Opossum) : XM_001363911
Pan
sp. (Chimpanzee) : XM_514420
Canis
sp. (Dog) : XM_845324
HIX0023573
HIT000214438 (
NM_153713
)
(LIX1-like protein;)
genome : 145,477,085 - 145,499,091 (22,007)
query : 1 - 1,401 (1,401/1,467)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, mito 9, cyto 6, extr 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023573)
HIX0159734
HIT000705692 (
ENST00000593882
)
(Non-protein coding transcript.)
genome : 145,484,751 - 145,507,857 (23,107)
query : 1 - 798 (798/798)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000709874 (
ENST00000598103
)
(Non-protein coding transcript.)
genome : 145,484,751 - 145,507,857 (23,107)
query : 1 - 798 (798/798)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000709455 (
ENST00000597679
)
(Hypothetical short protein.)
genome : 145,486,034 - 145,507,857 (21,824)
query : 1 - 919 (919/919)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000710123 (
ENST00000598354
)
(Hypothetical short protein.)
genome : 145,486,034 - 145,507,857 (21,824)
query : 1 - 919 (919/919)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000705558 (
ENST00000593747
)
(Hypothetical short protein.)
genome : 145,486,043 - 145,507,857 (21,815)
query : 1 - 750 (750/750)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000711224 (
ENST00000599469
)
(Hypothetical short protein.)
genome : 145,486,043 - 145,507,857 (21,815)
query : 1 - 750 (750/750)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000708925 (
ENST00000597144
)
(Non-protein coding transcript.)
genome : 145,486,263 - 145,507,857 (21,595)
query : 1 - 746 (746/746)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000711061 (
ENST00000599304
)
(Non-protein coding transcript.)
genome : 145,486,263 - 145,507,857 (21,595)
query : 1 - 746 (746/746)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000535141 (
ENST00000437207
)
(Non-protein coding transcript.)
genome : 145,486,272 - 145,493,959 (7,688)
query : 1 - 222 (222/222)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000695579 (
ENST00000583701
)
(Non-protein coding transcript.)
genome : 145,486,272 - 145,493,959 (7,688)
query : 1 - 222 (222/222)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0023573
HIT000306154
(
CR627381
)
(Conserved hypothetical protein.)
genome : 145,487,302 - 145,501,670 (14,369)
query : 21 - 3,634 (3,614/3,775)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.997)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 12, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023573)
HIX0159734
HIT000707310 (
ENST00000595518
)
(Non-protein coding transcript.)
genome : 145,490,462 - 145,507,857 (17,396)
query : 1 - 738 (738/738)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000709214 (
ENST00000597435
)
(Non-protein coding transcript.)
genome : 145,490,462 - 145,507,857 (17,396)
query : 1 - 738 (738/738)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000347385 (
ENST00000366105
)
(Conserved hypothetical protein.)
genome : 145,492,839 - 145,493,891 (1,053)
query : 1 - 377 (377/377)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 10, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000689758 (
ENST00000577808
)
(Conserved hypothetical protein.)
genome : 145,492,839 - 145,493,891 (1,053)
query : 1 - 377 (377/377)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 10, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000706130 (
ENST00000594324
)
(Conserved hypothetical protein.)
genome : 145,493,007 - 145,507,857 (14,851)
query : 1 - 736 (736/736)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3.5, cyto_nucl 3.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000707286 (
ENST00000595494
)
(Conserved hypothetical protein.)
genome : 145,493,007 - 145,507,857 (14,851)
query : 1 - 736 (736/736)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3.5, cyto_nucl 3.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0000976
HIT000535731 (
ENST00000437797
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,493,881 - 145,507,988 (14,108)
query : 1 - 536 (536/536)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14, cyto 10, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0159734
HIT000692729 (
ENST00000580819
)
(Hypothetical short protein.)
genome : 145,493,881 - 145,507,988 (14,108)
query : 1 - 536 (536/536)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 7, cyto_nucl 5.16667, nucl 4.5,
cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000709636 (
ENST00000597861
)
(Hypothetical short protein.)
genome : 145,493,881 - 145,507,857 (13,977)
query : 1 - 543 (543/543)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000710907 (
ENST00000599147
)
(Hypothetical short protein.)
genome : 145,493,881 - 145,507,857 (13,977)
query : 1 - 543 (543/543)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000711378 (
ENST00000599626
)
(Conserved hypothetical protein.)
genome : 145,493,881 - 145,507,857 (13,977)
query : 1 - 760 (760/760)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 13, extr 9, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000712158 (
ENST00000600414
)
(Conserved hypothetical protein.)
genome : 145,493,881 - 145,507,857 (13,977)
query : 1 - 760 (760/760)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 13, extr 9, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000546495 (
ENST00000448561
)
(Conserved hypothetical protein.)
genome : 145,493,881 - 145,507,611 (13,731)
query : 1 - 347 (347/347)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000695684 (
ENST00000583806
)
(Conserved hypothetical protein.)
genome : 145,493,881 - 145,507,611 (13,731)
query : 1 - 347 (347/347)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000519698 (
ENST00000421764
)
(Non-protein coding transcript.)
genome : 145,493,881 - 145,507,490 (13,610)
query : 1 - 287 (287/287)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000690482 (
ENST00000578540
)
(Non-protein coding transcript.)
genome : 145,493,881 - 145,507,490 (13,610)
query : 1 - 287 (287/287)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000510173 (
ENST00000412239
)
(Hypothetical short protein.)
genome : 145,493,884 - 145,508,218 (14,335)
query : 1 - 570 (570/570)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 7, cyto_nucl 5.16667, nucl 4.5,
cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000689172 (
ENST00000577217
)
(Hypothetical short protein.)
genome : 145,493,884 - 145,508,218 (14,335)
query : 1 - 570 (570/570)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 7, cyto_nucl 5.16667, nucl 4.5,
cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000707402 (
ENST00000595611
)
(Conserved hypothetical protein.)
genome : 145,493,893 - 145,507,857 (13,965)
query : 1 - 840 (840/840)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 9, mito_pero 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000713463 (
ENST00000601726
)
(Conserved hypothetical protein.)
genome : 145,493,893 - 145,507,857 (13,965)
query : 1 - 840 (840/840)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 9, mito_pero 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0023573
HIT000043548
(
AK123675
)
(LIX1-like protein;)
genome : 145,497,452 - 145,501,669 (4,218)
query : 1 - 3,245 (3,245/3,245)
3 exons
identity = 0.997
5'(1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR029270 : Limb expression 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 11.5, extr 7, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023573)
HIX0203529
HIT000441744_08
(
DQ575213
)
Representative transcript
(Non-protein coding transcript.)
genome : 145,506,941 - 145,506,970 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203529)
HIX0159734
HIT000545620 (
ENST00000447686
)
(Hypothetical short protein.)
genome : 145,507,357 - 145,508,319 (963)
query : 1 - 846 (846/846)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 7, cyto_nucl 5.16667, nucl 4.5,
cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000696823 (
ENST00000584961
)
(Hypothetical short protein.)
genome : 145,507,357 - 145,508,319 (963)
query : 1 - 846 (846/846)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 7, cyto_nucl 5.16667, nucl 4.5,
cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0000976
HIT000201822 (
NM_005105
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,557 - 145,513,534 (5,978)
query : 1 - 4,958 (4,958/4,973)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0000976
HIT000037829
(
BC017088
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,598 - 145,509,376 (1,779)
query : 4 - 762 (759/813)
6 exons
identity = 0.993
5'(0.964;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR000504 : RNA recognition motif domain
IPR008111 : RNA-binding motif protein 8
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005634 : Cellular Component : nucleus
0005737 : Cellular Component : cytoplasm
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0000976
HIT000126512_01 (
ENST00000330165
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,598 - 145,511,444 (3,847)
query : 1 - 2,827 (2,827/2,827)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0000976
HIT000695194_01 (
ENST00000583313
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,598 - 145,511,444 (3,847)
query : 1 - 2,827 (2,827/2,827)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0000976
HIT000601874 (
ENST00000498663
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,598 - 145,508,947 (1,350)
query : 1 - 764 (764/764)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13.5, nucl 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0000976
HIT000691551 (
ENST00000579626
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,598 - 145,508,947 (1,350)
query : 1 - 764 (764/764)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13.5, nucl 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0000976
HIT000588655 (
ENST00000484825
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,598 - 145,508,611 (1,014)
query : 1 - 542 (542/542)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13.5, nucl 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0000976
HIT000694334 (
ENST00000582443
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,598 - 145,508,611 (1,014)
query : 1 - 542 (542/542)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13.5, nucl 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0159734
HIT000708144 (
ENST00000596355
)
(Hypothetical short protein.)
genome : 145,507,600 - 145,508,503 (904)
query : 1 - 527 (527/527)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 7, cyto_nucl 5.16667, nucl 4.5,
cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0159734
HIT000709739 (
ENST00000597964
)
(Hypothetical short protein.)
genome : 145,507,600 - 145,508,503 (904)
query : 1 - 527 (527/527)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 7, cyto_nucl 5.16667, nucl 4.5,
cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159734)
HIX0000976
HIT000264406
(
BC071577
)
Representative transcript
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,609 - 145,513,534 (5,926)
query : 1 - 4,907 (4,907/4,922)
6 exons
identity = 0.993
5'(0.992;1.000;1.000;1.000;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR008111 : RNA-binding motif protein 8
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005634 : Cellular Component : nucleus
0005737 : Cellular Component : cytoplasm
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
Ortholog candidate ( ->
Evola
)
Oryzias
sp. (Medaka) : AB069905
Macaca
sp. (Macaque) : AB174344
Mus
sp. (Mouse) : AK009953
Equus
sp. (Horse) : AY647161
Danio
sp. (Zebrafish) : BC090261
Bos
sp. (Cow) : BC102484
Tetraodon
sp. (Tetraodon) : CR720064
Rattus
sp. (Rat) : DQ359102
Canis
sp. (Dog) : ENSCAFT00000017835
Monodelphis
sp. (Opossum) : ENSMODT00000023793
Pongo
sp. (Orangutan) : ENSPPYT00000001119
Takifugu
sp. (Fugu) : SINFRUT00000138758
Pan
sp. (Chimpanzee) : XM_001162472
HIX0000976
HIT000350587_01 (
ENST00000369307
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,633 - 145,509,451 (1,819)
query : 1 - 796 (796/796)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0000976
HIT000690357_01 (
ENST00000578414
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,633 - 145,509,451 (1,819)
query : 1 - 796 (796/796)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0000976
HIT000073706
(
AF198620
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,633 - 145,509,371 (1,739)
query : 1 - 716 (716/716)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR008111 : RNA-binding motif protein 8
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005634 : Cellular Component : nucleus
0005737 : Cellular Component : cytoplasm
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0000976
HIT000082044
(
AK075009
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,642 - 145,511,519 (3,878)
query : 7 - 2,864 (2,858/2,864)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.998
InterPro :
IPR000504 : RNA recognition motif domain
IPR008111 : RNA-binding motif protein 8
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005634 : Cellular Component : nucleus
0005737 : Cellular Component : cytoplasm
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0000976
HIT000002186
(
AF182415
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,638 - 145,509,339 (1,702)
query : 1 - 682 (682/682)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0000976
HIT000038121
(
BC017770
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,639 - 145,508,946 (1,308)
query : 2 - 723 (722/752)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13.5, nucl 9, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0000976
HIT000002066
(
AF161463
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,643 - 145,509,370 (1,728)
query : 1 - 708 (708/740)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0000976
HIT000074624
(
AF231511
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,647 - 145,509,369 (1,723)
query : 1 - 700 (700/700)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR008111 : RNA-binding motif protein 8
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005634 : Cellular Component : nucleus
0005737 : Cellular Component : cytoplasm
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0000976
HIT000070571
(
AF127761
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,655 - 145,511,444 (3,790)
query : 1 - 2,770 (2,770/2,770)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR008111 : RNA-binding motif protein 8
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005634 : Cellular Component : nucleus
0005737 : Cellular Component : cytoplasm
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0000976
HIT000076632
(
AF299118
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,667 - 145,509,211 (1,545)
query : 1 - 525 (525/525)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR008111 : RNA-binding motif protein 8
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005634 : Cellular Component : nucleus
0005737 : Cellular Component : cytoplasm
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0000976
HIT000268676
(
CR541805
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,667 - 145,509,211 (1,545)
query : 1 - 525 (525/525)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR008111 : RNA-binding motif protein 8
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005634 : Cellular Component : nucleus
0005737 : Cellular Component : cytoplasm
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0000976
HIT000668873_01 (
ENST00000555532
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,667 - 145,509,211 (1,545)
query : 1 - 525 (525/525)
6 exons
identity = 0.987
5'(1.000;0.983;1.000;0.971;0.985;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11.5, nucl 8.5, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0000976
HIT000268694
(
CR541823
)
(RNA-binding protein 8A; Binder of OVCA1-1; BOV-1; RNA-binding motif protein 8A; RNA-binding protein Y14; Ribonucleoprotein RBM8A;)
genome : 145,507,667 - 145,509,208 (1,542)
query : 1 - 522 (522/522)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.993;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR008111 : RNA-binding motif protein 8
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005634 : Cellular Component : nucleus
0005737 : Cellular Component : cytoplasm
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0028668
HIT000084246
(
AY081843
)
(Putative gonadotropin-releasing hormone II receptor; GnRH II receptor; GnRH-II-R; Type II GnRH receptor;)
genome : 145,509,752 - 145,515,745 (5,994)
query : 1 - 1,035 (1,035/1,035)
4 exons
identity = 0.999
3'(1.000;0.995;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001658 : Gonadotrophin-releasing hormone receptor family
IPR027983 : Gonadotropin-releasing hormone receptor 2
GO :
0004968 : Molecular Function : gonadotropin-releasing hormone receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
0016500 : Molecular Function : protein-hormone receptor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028668)
HIX0028668
HIT000315179 (
ENST00000361928
)
(Putative gonadotropin-releasing hormone II receptor; GnRH II receptor; GnRH-II-R; Type II GnRH receptor;)
genome : 145,509,752 - 145,515,745 (5,994)
query : 1 - 1,035 (1,035/1,035)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10.5, extr 9, cyto_nucl 9, mito 8, nucl 4.5,
extr_plas 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028668)
HIX0028668
HIT000693442 (
ENST00000581539
)
(Putative gonadotropin-releasing hormone II receptor; GnRH II receptor; GnRH-II-R; Type II GnRH receptor;)
genome : 145,509,752 - 145,515,745 (5,994)
query : 1 - 1,035 (1,035/1,035)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10.5, extr 9, cyto_nucl 9, mito 8, nucl 4.5,
extr_plas 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028668)
HIX0028668
HIT000084209
(
AY077708
)
Representative transcript
(Putative gonadotropin-releasing hormone II receptor; GnRH II receptor; GnRH-II-R; Type II GnRH receptor;)
genome : 145,509,779 - 145,516,076 (6,298)
query : 1 - 1,599 (1,599/1,599)
3 exons
identity = 0.997
3'(0.996;0.991;1.000)5'
coverage = 1.000
InterPro :
IPR027983 : Gonadotropin-releasing hormone receptor 2
GO :
0004968 : Molecular Function : gonadotropin-releasing hormone receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028668)
Ortholog candidate ( ->
Evola
)
Oryzias
sp. (Medaka) : AB083363
Tetraodon
sp. (Tetraodon) : AB212816
Macaca
sp. (Macaque) : AF353987
Equus
sp. (Horse) : ENSECAT00000025249
Gallus
sp. (Chicken) : ENSGALT00000033582
Oryzias
sp. (Medaka) : ENSORLT00000015860
Pongo
sp. (Orangutan) : ENSPPYT00000001120
Takifugu
sp. (Fugu) : SINFRUT00000160897
Monodelphis
sp. (Opossum) : XM_001369131
Danio
sp. (Zebrafish) : XM_678316
Canis
sp. (Dog) : XM_845292
Pan
sp. (Chimpanzee) : XR_021854
Bos
sp. (Cow) : XR_028740
HIX0028668
HIT000119491 (
ENST00000312753
)
(Putative gonadotropin-releasing hormone II receptor; GnRH II receptor; GnRH-II-R; Type II GnRH receptor;)
genome : 145,509,779 - 145,516,076 (6,298)
query : 1 - 1,599 (1,599/1,599)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028668)
HIX0028668
HIT000693008 (
ENST00000581100
)
(Putative gonadotropin-releasing hormone II receptor; GnRH II receptor; GnRH-II-R; Type II GnRH receptor;)
genome : 145,509,779 - 145,516,076 (6,298)
query : 1 - 1,599 (1,599/1,599)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028668)
HIX0028668
HIT000366988 (
NR_002328
)
(Putative gonadotropin-releasing hormone II receptor; GnRH II receptor; GnRH-II-R; Type II GnRH receptor;)
genome : 145,509,820 - 145,516,076 (6,257)
query : 1 - 6,257 (6,257/6,257)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9, cyto_nucl 8.5, mito_nucl 8.5, extr 8,
nucl 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028668)
HIX0028668
HIT000331738
(
AY233133
)
(Putative gonadotropin-releasing hormone II receptor; GnRH II receptor; GnRH-II-R; Type II GnRH receptor;)
genome : 145,509,860 - 145,515,845 (5,986)
query : 1 - 1,476 (1,476/1,476)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001658 : Gonadotrophin-releasing hormone receptor family
IPR027983 : Gonadotropin-releasing hormone receptor 2
GO :
0004968 : Molecular Function : gonadotropin-releasing hormone receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
0016500 : Molecular Function : protein-hormone receptor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028668)
HIX0028668
HIT000668659_01 (
ENST00000555315
)
(Putative gonadotropin-releasing hormone II receptor; GnRH II receptor; GnRH-II-R; Type II GnRH receptor;)
genome : 145,509,863 - 145,510,942 (1,080)
query : 1 - 631 (631/631)
2 exons
identity = 0.995
3'(1.000;0.986)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028668)
HIX0000976
HIT000023675
(
AL049219
)
(Conserved hypothetical protein.)
genome : 145,511,195 - 145,512,878 (1,684)
query : 4 - 1,692 (1,689/1,723)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000976)
HIX0028668
HIT000333849
(
BC020593
)
(Putative gonadotropin-releasing hormone II receptor; GnRH II receptor; GnRH-II-R; Type II GnRH receptor;)
genome : 145,514,174 - 145,515,899 (1,726)
query : 1 - 1,036 (1,036/1,104)
3 exons
identity = 0.996
3'(0.995;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR027983 : Gonadotropin-releasing hormone receptor 2
GO :
0004968 : Molecular Function : gonadotropin-releasing hormone receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 10.5, mito 8, extr 6, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028668)
HIX0028668
HIT000574228 (
ENST00000469718
)
(Putative gonadotropin-releasing hormone II receptor; GnRH II receptor; GnRH-II-R; Type II GnRH receptor;)
genome : 145,514,346 - 145,515,899 (1,554)
query : 1 - 861 (861/861)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 10.5, mito 8, extr 6, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028668)
HIX0028668
HIT000694180 (
ENST00000582286
)
(Putative gonadotropin-releasing hormone II receptor; GnRH II receptor; GnRH-II-R; Type II GnRH receptor;)
genome : 145,514,346 - 145,515,899 (1,554)
query : 1 - 861 (861/861)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 10.5, mito 8, extr 6, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028668)
HIX0028668
HIT000342556
(
DQ266410
)
(Putative gonadotropin-releasing hormone II receptor; GnRH II receptor; GnRH-II-R; Type II GnRH receptor;)
genome : 145,514,421 - 145,515,899 (1,479)
query : 1 - 786 (786/786)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR027983 : Gonadotropin-releasing hormone receptor 2
GO :
0004968 : Molecular Function : gonadotropin-releasing hormone receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 10.5, mito 8, extr 6, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028668)
HIX0028668
HIT000383660
(
AB239331
)
(Putative gonadotropin-releasing hormone II receptor; GnRH II receptor; GnRH-II-R; Type II GnRH receptor;)
genome : 145,514,421 - 145,515,899 (1,479)
query : 1 - 786 (786/786)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR027983 : Gonadotropin-releasing hormone receptor 2
GO :
0004968 : Molecular Function : gonadotropin-releasing hormone receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 10.5, mito 8, extr 6, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028668)
HIX0028668
HIT000429602
(
AK310736
)
(Putative gonadotropin-releasing hormone II receptor; GnRH II receptor; GnRH-II-R; Type II GnRH receptor;)
genome : 145,514,889 - 145,516,076 (1,188)
query : 1 - 1,077 (1,077/1,077)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 1.000
InterPro :
IPR027983 : Gonadotropin-releasing hormone receptor 2
GO :
0004968 : Molecular Function : gonadotropin-releasing hormone receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, cyto_nucl 4.5, nucl 4, cyto 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028668)
HIX0028668
HIT000085423
(
AY233132
)
(Putative gonadotropin-releasing hormone II receptor; GnRH II receptor; GnRH-II-R; Type II GnRH receptor;)
genome : 145,515,242 - 145,516,070 (829)
query : 1 - 829 (829/829)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
InterPro :
IPR027983 : Gonadotropin-releasing hormone receptor 2
GO :
0004968 : Molecular Function : gonadotropin-releasing hormone receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, nucl 8.5, cyto_nucl 8.5, mito 8, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028668)
HIX0199831
HIT000200640 (
NM_003846
)
(Peroxisomal membrane protein 11B; Peroxin-11B; Peroxisomal biogenesis factor 11B; Protein PEX11 homolog beta; PEX11-beta;)
genome : 145,516,165 - 145,523,732 (7,568)
query : 1 - 1,829 (1,829/1,836)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.996
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 22, plas 3, nucl 3, lyso 2, cyto_plas 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199831)
HIX0199831
HIT000727623 (
NR_073491
)
(Peroxisomal membrane protein 11B isoform 2.)
genome : 145,516,165 - 145,523,732 (7,568)
query : 1 - 1,825 (1,825/1,832)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.996
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, mito 8, cyto_plas 8, pero 5, mito_nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199831)
HIX0199831
HIT000727624 (
NR_073492
)
(Peroxisomal membrane protein 11B isoform 2.)
genome : 145,516,165 - 145,523,732 (7,568)
query : 1 - 1,819 (1,819/1,826)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.996
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, mito 8, cyto_plas 8, pero 5, mito_nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199831)
HIX0199831
HIT000350586 (
ENST00000369306
)
(Peroxisomal membrane protein 11B; Peroxin-11B; Peroxisomal biogenesis factor 11B; Protein PEX11 homolog beta; PEX11-beta;)
genome : 145,516,252 - 145,523,730 (7,479)
query : 1 - 1,740 (1,740/1,740)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 22, plas 3, nucl 3, lyso 2, cyto_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199831)
HIX0199831
HIT000693052 (
ENST00000581144
)
(Peroxisomal membrane protein 11B; Peroxin-11B; Peroxisomal biogenesis factor 11B; Protein PEX11 homolog beta; PEX11-beta;)
genome : 145,516,252 - 145,523,730 (7,479)
query : 1 - 1,740 (1,740/1,740)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 22, plas 3, nucl 3, lyso 2, cyto_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199831)
HIX0199831
HIT000058545
(
AB018080
)
Representative transcript
(Peroxisomal membrane protein 11B; Peroxin-11B; Peroxisomal biogenesis factor 11B; Protein PEX11 homolog beta; PEX11-beta;)
genome : 145,516,383 - 145,523,731 (7,349)
query : 1 - 1,610 (1,610/1,610)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008733 : Peroxisomal biogenesis factor 11
GO :
0005779 : Cellular Component : integral component of peroxisomal membrane
0016559 : Biological Process : peroxisome fission
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 22, plas 3, nucl 3, lyso 2, cyto_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199831)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : BC098865
Mus
sp. (Mouse) : BC115770
Bos
sp. (Cow) : BC118195
Danio
sp. (Zebrafish) : BC122270
Pongo
sp. (Orangutan) : CR857177
Oryzias
sp. (Medaka) : ENSORLT00000013721
Tetraodon
sp. (Tetraodon) : GSTENT00008798001
Takifugu
sp. (Fugu) : SINFRUT00000141748
Macaca
sp. (Macaque) : XM_001090750
Monodelphis
sp. (Opossum) : XM_001363737
Equus
sp. (Horse) : XM_001499490
Canis
sp. (Dog) : XM_533034
HIX0199831
HIT000035568
(
BC011963
)
(Peroxisomal membrane protein 11B; Peroxin-11B; Peroxisomal biogenesis factor 11B; Protein PEX11 homolog beta; PEX11-beta;)
genome : 145,516,385 - 145,523,730 (7,346)
query : 1 - 1,607 (1,607/1,621)
4 exons
identity = 0.999
5'(1.000;1.000;0.995;1.000)3'
coverage = 1.000
InterPro :
IPR008733 : Peroxisomal biogenesis factor 11
GO :
0005779 : Cellular Component : integral component of peroxisomal membrane
0016559 : Biological Process : peroxisome fission
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 22, plas 3, nucl 3, lyso 2, cyto_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199831)
HIX0199831
HIT000068400
(
AF093670
)
(Peroxisomal membrane protein 11B; Peroxin-11B; Peroxisomal biogenesis factor 11B; Protein PEX11 homolog beta; PEX11-beta;)
genome : 145,516,401 - 145,523,732 (7,332)
query : 17 - 1,609 (1,593/1,610)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.989
InterPro :
IPR008733 : Peroxisomal biogenesis factor 11
GO :
0005779 : Cellular Component : integral component of peroxisomal membrane
0016559 : Biological Process : peroxisome fission
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 22, plas 3, nucl 3, lyso 2, cyto_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199831)
HIX0199831
HIT000007265
(
AK023991
)
(Peroxisomal membrane protein 11B; Peroxin-11B; Peroxisomal biogenesis factor 11B; Protein PEX11 homolog beta; PEX11-beta;)
genome : 145,516,401 - 145,523,730 (7,330)
query : 1 - 1,591 (1,591/1,603)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR008733 : Peroxisomal biogenesis factor 11
GO :
0005779 : Cellular Component : integral component of peroxisomal membrane
0016559 : Biological Process : peroxisome fission
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 22, plas 3, nucl 3, lyso 2, cyto_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199831)
HIX0199831
HIT000268916
(
CR542047
)
(Peroxisomal membrane protein 11B; Peroxin-11B; Peroxisomal biogenesis factor 11B; Protein PEX11 homolog beta; PEX11-beta;)
genome : 145,516,401 - 145,522,916 (6,516)
query : 1 - 777 (777/777)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008733 : Peroxisomal biogenesis factor 11
GO :
0005779 : Cellular Component : integral component of peroxisomal membrane
0016559 : Biological Process : peroxisome fission
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 22, plas 3, nucl 3, lyso 2, cyto_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199831)
HIX0199831
HIT000655434 (
NM_001184795
)
(Peroxisomal membrane protein 11B; Peroxin-11B; Peroxisomal biogenesis factor 11B; Protein PEX11 homolog beta; PEX11-beta;)
genome : 145,516,560 - 145,523,732 (7,173)
query : 1 - 1,635 (1,635/1,642)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.996
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, nucl 5, pero 4, cyto 3, E.R. 3, plas 2,
lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199831)
HIX0199831
HIT000636933 (
ENST00000537888
)
(Peroxisomal membrane protein 11B; Peroxin-11B; Peroxisomal biogenesis factor 11B; Protein PEX11 homolog beta; PEX11-beta;)
genome : 145,516,560 - 145,523,729 (7,170)
query : 1 - 1,632 (1,632/1,632)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, nucl 5, pero 4, cyto 3, E.R. 3, plas 2,
lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199831)
HIX0199831
HIT000691909 (
ENST00000579989
)
(Peroxisomal membrane protein 11B; Peroxin-11B; Peroxisomal biogenesis factor 11B; Protein PEX11 homolog beta; PEX11-beta;)
genome : 145,516,560 - 145,523,729 (7,170)
query : 1 - 1,632 (1,632/1,632)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, nucl 5, pero 4, cyto 3, E.R. 3, plas 2,
lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199831)
HIX0199831
HIT000727625 (
NR_073493
)
(Peroxisomal membrane protein 11B; Peroxin-11B; Peroxisomal biogenesis factor 11B; Protein PEX11 homolog beta; PEX11-beta;)
genome : 145,516,598 - 145,523,732 (7,135)
query : 1 - 2,074 (2,074/2,081)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.997
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R._mito 8.66667, mito 8, cyto 7, mito_pero 6.33333,
E.R. 5, cyto_plas 5, plas 3, extr 3, extr_plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199831)
HIX0199831
HIT000496607
(
AK301983
)
(Peroxisomal membrane protein 11B; Peroxin-11B; Peroxisomal biogenesis factor 11B; Protein PEX11 homolog beta; PEX11-beta;)
genome : 145,516,600 - 145,523,109 (6,510)
query : 1 - 972 (972/972)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008733 : Peroxisomal biogenesis factor 11
GO :
0005779 : Cellular Component : integral component of peroxisomal membrane
0016559 : Biological Process : peroxisome fission
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, nucl 5, pero 4, cyto 3, E.R. 3, plas 2,
lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199831)
HIX0199831
HIT000019028
(
AK094173
)
(Peroxisomal membrane protein 11B; Peroxin-11B; Peroxisomal biogenesis factor 11B; Protein PEX11 homolog beta; PEX11-beta;)
genome : 145,521,304 - 145,523,729 (2,426)
query : 1 - 2,426 (2,426/2,426)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR008733 : Peroxisomal biogenesis factor 11
GO :
0005779 : Cellular Component : integral component of peroxisomal membrane
0016559 : Biological Process : peroxisome fission
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, mito 8, cyto_plas 8, pero 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199831)
HIX0199831
HIT000526568 (
ENST00000428634
)
(Peroxisomal membrane protein 11B; Peroxin-11B; Peroxisomal biogenesis factor 11B; Protein PEX11 homolog beta; PEX11-beta;)
genome : 145,522,674 - 145,523,730 (1,057)
query : 1 - 667 (667/667)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199831)
HIX0199831
HIT000695155 (
ENST00000583274
)
(Peroxisomal membrane protein 11B; Peroxin-11B; Peroxisomal biogenesis factor 11B; Protein PEX11 homolog beta; PEX11-beta;)
genome : 145,522,674 - 145,523,730 (1,057)
query : 1 - 667 (667/667)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199831)
HIX0200017
HIT000350584 (
ENST00000369304
)
(Integrin alpha-10; Precursor;)
genome : 145,524,891 - 145,543,868 (18,978)
query : 1 - 5,269 (5,269/5,269)
30 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28.5, extr_plas 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200017)
HIX0200017
HIT000694898 (
ENST00000583017
)
(Integrin alpha-10; Precursor;)
genome : 145,524,891 - 145,543,868 (18,978)
query : 1 - 5,269 (5,269/5,269)
30 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28.5, extr_plas 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200017)
HIX0200017
HIT000252369
(
AY358325
)
(Integrin alpha-10; Precursor;)
genome : 145,524,969 - 145,529,320 (4,352)
query : 37 - 1,475 (1,439/1,486)
4 exons
identity = 0.997
5'(1.000;1.000;1.000;0.996)3'
coverage = 0.968
InterPro :
IPR013519 : Integrin alpha beta-propellor
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, plas 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200017)
HIX0200017
HIT000572838 (
ENST00000468261
)
(Integrin alpha-10; Precursor;)
genome : 145,524,969 - 145,529,320 (4,352)
query : 1 - 1,438 (1,438/1,438)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, plas 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200017)
HIX0200017
HIT000693190 (
ENST00000581283
)
(Integrin alpha-10; Precursor;)
genome : 145,524,969 - 145,529,320 (4,352)
query : 1 - 1,438 (1,438/1,438)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, plas 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200017)
HIX0200017
HIT000069731
(
AF112345
)
Representative transcript
(Integrin alpha-10; Precursor;)
genome : 145,524,990 - 145,543,868 (18,879)
query : 1 - 5,170 (5,170/5,189)
30 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.988;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000413 : Integrin alpha chain
IPR002035 : von Willebrand factor, type A
IPR013519 : Integrin alpha beta-propellor
IPR013649 : Integrin alpha-2
GO :
0007155 : Biological Process : cell adhesion
0008305 : Cellular Component : integrin complex
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28.5, extr_plas 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200017)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC115770
Equus
sp. (Horse) : ENSECAT00000009218
Macaca
sp. (Macaque) : ENSMMUT00000022563
Monodelphis
sp. (Opossum) : ENSMODT00000030528
Oryzias
sp. (Medaka) : ENSORLT00000012856
Pongo
sp. (Orangutan) : ENSPPYT00000001122
Tetraodon
sp. (Tetraodon) : GSTENT00036565001
Tetraodon
sp. (Tetraodon) : GSTENT00036630001
Takifugu
sp. (Fugu) : SINFRUT00000131466
Rattus
sp. (Rat) : XM_001063132
Danio
sp. (Zebrafish) : XM_001921891
Pan
sp. (Chimpanzee) : XM_514418
Bos
sp. (Cow) : XM_582982
Canis
sp. (Dog) : XM_845262
HIX0200017
HIT000200448 (
NM_003637
)
(Integrin alpha-10; Precursor;)
genome : 145,524,990 - 145,543,868 (18,879)
query : 1 - 5,170 (5,170/5,189)
30 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28.5, extr_plas 15
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200017)
HIX0200017
HIT000503038
(
BC144637
)
(Integrin alpha-10; Precursor;)
genome : 145,525,016 - 145,542,534 (17,519)
query : 1 - 3,381 (3,381/3,381)
26 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.991;1.000)3'
coverage = 1.000
InterPro :
IPR000413 : Integrin alpha chain
IPR002035 : von Willebrand factor, type A
IPR013519 : Integrin alpha beta-propellor
IPR013649 : Integrin alpha-2
GO :
0007155 : Biological Process : cell adhesion
0008305 : Cellular Component : integrin complex
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200017)
HIX0200017
HIT000501577
(
BC140831
)
(Integrin alpha-10; Precursor;)
genome : 145,525,016 - 145,542,533 (17,518)
query : 1 - 3,380 (3,380/3,380)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000413 : Integrin alpha chain
IPR002035 : von Willebrand factor, type A
IPR013519 : Integrin alpha beta-propellor
IPR013649 : Integrin alpha-2
GO :
0007155 : Biological Process : cell adhesion
0008305 : Cellular Component : integrin complex
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200017)
HIX0200017
HIT000638408 (
ENST00000539363
)
(Integrin alpha-10; Precursor;)
genome : 145,525,016 - 145,542,533 (17,518)
query : 1 - 3,380 (3,380/3,380)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200017)
HIX0200017
HIT000692036 (
ENST00000580116
)
(Integrin alpha-10; Precursor;)
genome : 145,525,016 - 145,542,533 (17,518)
query : 1 - 3,380 (3,380/3,380)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200017)
HIX0200017
HIT000498779
(
AK304155
)
(Integrin alpha-10; Precursor;)
genome : 145,525,035 - 145,542,539 (17,505)
query : 1 - 3,478 (3,478/3,478)
27 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.994;1.000;
0.986;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.991;0.997)3'
coverage = 1.000
InterPro :
IPR000413 : Integrin alpha chain
IPR002035 : von Willebrand factor, type A
IPR013519 : Integrin alpha beta-propellor
IPR013649 : Integrin alpha-2
GO :
0007155 : Biological Process : cell adhesion
0008305 : Cellular Component : integrin complex
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200017)
HIX0200017
HIT000637856 (
ENST00000538811
)
(Integrin alpha-10; Precursor;)
genome : 145,525,035 - 145,542,539 (17,505)
query : 1 - 3,479 (3,479/3,479)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200017)
HIX0200017
HIT000695878 (
ENST00000584001
)
(Integrin alpha-10; Precursor;)
genome : 145,525,035 - 145,542,539 (17,505)
query : 1 - 3,479 (3,479/3,479)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200017)
HIX0200017
HIT000498807
(
AK304183
)
(Integrin alpha-10; Precursor;)
genome : 145,525,035 - 145,542,424 (17,390)
query : 1 - 3,541 (3,541/3,541)
29 exons
identity = 0.992
5'(1.000;1.000;0.755;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000413 : Integrin alpha chain
IPR002035 : von Willebrand factor, type A
IPR013519 : Integrin alpha beta-propellor
IPR013649 : Integrin alpha-2
GO :
0007155 : Biological Process : cell adhesion
0008305 : Cellular Component : integrin complex
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200017)
HIX0200017
HIT000433121
(
AK314255
)
(Integrin alpha-10; Precursor;)
genome : 145,525,042 - 145,542,278 (17,237)
query : 1 - 3,528 (3,528/3,528)
30 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.990;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000413 : Integrin alpha chain
IPR002035 : von Willebrand factor, type A
IPR013519 : Integrin alpha beta-propellor
IPR013649 : Integrin alpha-2
GO :
0007155 : Biological Process : cell adhesion
0008305 : Cellular Component : integrin complex
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28.5, extr_plas 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200017)
HIX0200017
HIT000065979
(
AF074015
)
(Integrin alpha-10; Precursor;)
genome : 145,525,047 - 145,542,601 (17,555)
query : 3 - 3,849 (3,847/3,884)
30 exons
identity = 0.997
5'(0.986;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;0.993;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;1.000;0.993;1.000;
0.974;0.978;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)3'
coverage = 0.990
InterPro :
IPR000413 : Integrin alpha chain
IPR002035 : von Willebrand factor, type A
IPR013519 : Integrin alpha beta-propellor
IPR013649 : Integrin alpha-2
GO :
0007155 : Biological Process : cell adhesion
0008305 : Cellular Component : integrin complex
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28.5, extr_plas 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200017)
HIX0200017
HIT000585214 (
ENST00000481236
)
(Integrin alpha-10; Precursor;)
genome : 145,530,952 - 145,532,622 (1,671)
query : 1 - 583 (583/583)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 7.5, cyto_nucl 7.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200017)
HIX0200017
HIT000697134 (
ENST00000585276
)
(Integrin alpha-10; Precursor;)
genome : 145,530,952 - 145,532,622 (1,671)
query : 1 - 583 (583/583)
2 exons
identity = 0.998
5'(1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 7.5, cyto_nucl 7.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200017)
HIX0203705
HIT000512999 (
ENST00000415065
)
(Conserved hypothetical protein.)
genome : 145,541,593 - 145,542,229 (637)
query : 1 - 408 (408/408)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203705)
HIX0203705
HIT000696239 (
ENST00000584369
)
(Conserved hypothetical protein.)
genome : 145,541,593 - 145,542,229 (637)
query : 1 - 408 (408/408)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203705)
HIX0200017
HIT000081598
(
AK074563
)
(Hypothetical short protein.)
genome : 145,542,592 - 145,544,558 (1,967)
query : 1 - 1,967 (1,967/1,967)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 8, cyto 2.5, cyto_nucl 2.5, nucl 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200017)
HIX0199876
HIT000212931 (
NM_144698
)
(Ankyrin repeat domain-containing protein 35.)
genome : 145,549,209 - 145,568,526 (19,318)
query : 1 - 3,363 (3,363/3,363)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_mito 12.3333, mito_pero 11.8333, nucl 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199876)
HIX0199876
HIT000488932
(
AK294308
)
(Ankyrin repeat domain-containing protein 35.)
genome : 145,549,227 - 145,568,521 (19,295)
query : 1 - 3,067 (3,067/3,067)
12 exons
identity = 0.998
5'(0.976;1.000;1.000;1.000;1.000;1.000;1.000;
0.999;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, mito_pero 10, nucl 6.5, cyto_nucl 6.5,
cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199876)
HIX0199876
HIT000309716 (
ENST00000355594
)
(Ankyrin repeat domain-containing protein 35.)
genome : 145,549,230 - 145,568,526 (19,297)
query : 1 - 3,342 (3,342/3,342)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_mito 12.3333, mito_pero 11.8333, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199876)
HIX0199876
HIT000694310 (
ENST00000582418
)
(Ankyrin repeat domain-containing protein 35.)
genome : 145,549,230 - 145,568,526 (19,297)
query : 1 - 3,342 (3,342/3,342)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_mito 12.3333, mito_pero 11.8333, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199876)
HIX0199876
HIT000015987
(
AK091120
)
Representative transcript
(Ankyrin repeat domain-containing protein 35.)
genome : 145,549,244 - 145,568,521 (19,278)
query : 1 - 3,323 (3,323/3,323)
14 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;0.998;1.000;1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_mito 12.3333, mito_pero 11.8333, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199876)
HIX0199876
HIT000491485
(
AK296861
)
(Ankyrin repeat domain-containing protein 35.)
genome : 145,549,244 - 145,561,166 (11,923)
query : 1 - 869 (869/869)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 8, cyto 4.5, cyto_nucl 4.16667,
cyto_pero 3.83333, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199876)
HIX0199876
HIT000643671 (
ENST00000544626
)
(Ankyrin repeat domain-containing protein 35.)
genome : 145,549,244 - 145,561,166 (11,923)
query : 1 - 869 (869/869)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 8, cyto 4.5, cyto_nucl 4.16667,
cyto_pero 3.83333, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199876)
HIX0199876
HIT000696964 (
ENST00000585106
)
(Ankyrin repeat domain-containing protein 35.)
genome : 145,549,244 - 145,561,166 (11,923)
query : 1 - 869 (869/869)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 8, cyto 4.5, cyto_nucl 4.16667,
cyto_pero 3.83333, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199876)
HIX0199876
HIT000336977
(
BC101618
)
(Ankyrin repeat domain-containing protein 35.)
genome : 145,549,262 - 145,567,778 (18,517)
query : 1 - 3,083 (3,083/3,083)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_mito 12.3333, mito_pero 11.8333, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199876)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK046624
Equus
sp. (Horse) : ENSECAT00000017135
Macaca
sp. (Macaque) : ENSMMUT00000022563
Oryzias
sp. (Medaka) : ENSORLT00000021060
Pongo
sp. (Orangutan) : ENSPPYT00000001123
Tetraodon
sp. (Tetraodon) : GSTENT00017346001
Takifugu
sp. (Fugu) : SINFRUT00000159860
Monodelphis
sp. (Opossum) : XM_001369024
Rattus
sp. (Rat) : XM_345258
Canis
sp. (Dog) : XM_533033
Bos
sp. (Cow) : XM_592376
Pan
sp. (Chimpanzee) : XR_024958
HIX0199876
HIT000336979
(
BC101620
)
(Ankyrin repeat domain-containing protein 35.)
genome : 145,549,262 - 145,567,778 (18,517)
query : 1 - 3,083 (3,083/3,083)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_mito 12.3333, mito_pero 11.8333, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199876)
HIX0199876
HIT000014460
(
AK057853
)
(Ankyrin repeat domain-containing protein 35.)
genome : 145,562,315 - 145,568,526 (6,212)
query : 1 - 1,253 (1,253/1,253)
5 exons
identity = 0.999
5'(0.999;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 6, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199876)
HIX0213947
HIT000476513 (
ENST00000393046
)
(E3 SUMO-protein ligase PIAS3 family protein.)
genome : 145,575,233 - 145,580,322 (5,090)
query : 1 - 952 (952/952)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 6, cyto 6, cyto_pero 5.33333,
cyto_nucl 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213947)
HIX0213947
HIT000690543 (
ENST00000578604
)
(E3 SUMO-protein ligase PIAS3 family protein.)
genome : 145,575,233 - 145,580,322 (5,090)
query : 1 - 952 (952/952)
6 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 6, cyto 6, cyto_pero 5.33333,
cyto_nucl 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213947)
HIX0213947
HIT000350579 (
ENST00000369299
)
(E3 SUMO-protein ligase PIAS3 family protein.)
genome : 145,575,290 - 145,580,662 (5,373)
query : 1 - 1,235 (1,235/1,235)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 10, cyto 3.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213947)
HIX0213947
HIT000498663
(
AK304039
)
Representative transcript
(E3 SUMO-protein ligase PIAS3; EC=6.3.2.-; Protein inhibitor of activated STAT protein 3;)
genome : 145,575,290 - 145,580,662 (5,373)
query : 1 - 1,235 (1,235/1,235)
6 exons
identity = 0.998
5'(1.000;0.998;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR003034 : SAP domain
IPR023321 : PINIT domain
IPR027226 : E3 SUMO-protein ligase PIAS3
GO :
0003676 : Molecular Function : nucleic acid binding
0019789 : Molecular Function : SUMO ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 10, cyto 3.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213947)
HIX0213947
HIT000693829 (
ENST00000581930
)
(E3 SUMO-protein ligase PIAS3 family protein.)
genome : 145,575,290 - 145,580,662 (5,373)
query : 1 - 1,235 (1,235/1,235)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 10, cyto 3.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213947)
HIX0213947
HIT000568307 (
ENST00000463514
)
(SAP domain containing protein.)
genome : 145,575,324 - 145,578,307 (2,984)
query : 1 - 409 (409/409)
3 exons
identity = 0.993
5'(1.000;0.982;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, extr 4, nucl 1.5, cyto_nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213947)
HIX0213947
HIT000693576 (
ENST00000581674
)
(SAP domain containing protein.)
genome : 145,575,324 - 145,578,307 (2,984)
query : 1 - 409 (409/409)
3 exons
identity = 0.993
5'(1.000;0.982;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, extr 4, nucl 1.5, cyto_nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213947)
HIX0213947
HIT000488855
(
AK294231
)
(E3 SUMO-protein ligase PIAS3; EC=6.3.2.-; Protein inhibitor of activated STAT protein 3;)
genome : 145,576,020 - 145,580,526 (4,507)
query : 1 - 1,042 (1,042/1,042)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR003034 : SAP domain
IPR027226 : E3 SUMO-protein ligase PIAS3
GO :
0003676 : Molecular Function : nucleic acid binding
0019789 : Molecular Function : SUMO ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 10, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213947)
HIX0213947
HIT000588276 (
ENST00000484423
)
(E3 SUMO-protein ligase PIAS3 family protein.)
genome : 145,576,034 - 145,579,288 (3,255)
query : 1 - 827 (827/827)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 10, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213947)
HIX0213947
HIT000690149 (
ENST00000578203
)
(E3 SUMO-protein ligase PIAS3 family protein.)
genome : 145,576,034 - 145,579,288 (3,255)
query : 1 - 827 (827/827)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 10, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213947)
HIX0213947
HIT000601658 (
ENST00000498436
)
(PINIT domain containing protein.)
genome : 145,578,322 - 145,580,458 (2,137)
query : 1 - 813 (813/813)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 2, cyto 2, mito 2, cyto_nucl 2,
cyto_mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213947)
HIX0213947
HIT000695349 (
ENST00000583468
)
(PINIT domain containing protein.)
genome : 145,578,322 - 145,580,458 (2,137)
query : 1 - 813 (813/813)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 2, cyto 2, mito 2, cyto_nucl 2,
cyto_mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213947)
HIX0213702
HIT000003504
(
AK001030
)
(Conserved hypothetical protein.)
genome : 145,580,865 - 145,582,503 (1,639)
query : 1 - 1,640 (1,640/1,640)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213702)
HIX0213702
HIT000024850
(
AL122061
)
Representative transcript
(E3 SUMO-protein ligase PIAS3; EC=6.3.2.-; Protein inhibitor of activated STAT protein 3;)
genome : 145,581,199 - 145,586,546 (5,348)
query : 3 - 1,886 (1,884/1,896)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 0.998
EC number :
EC 6.3.2.-
InterPro :
IPR004181 : Zinc finger, MIZ-type
IPR027226 : E3 SUMO-protein ligase PIAS3
GO :
0008270 : Molecular Function : zinc ion binding
0019789 : Molecular Function : SUMO ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 12, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213702)
HIX0213702
HIT000024920
(
AL133016
)
(E3 SUMO-protein ligase PIAS3; EC=6.3.2.-; Protein inhibitor of activated STAT protein 3;)
genome : 145,583,714 - 145,586,546 (2,833)
query : 1 - 2,355 (2,355/2,499)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR027228 : E3 SUMO-protein ligase PIAS2
GO :
0019789 : Molecular Function : SUMO ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, extr 13, mito_pero 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213702)
HIX0213702
HIT000576507 (
ENST00000472114
)
(Conserved hypothetical protein.)
genome : 145,583,714 - 145,586,546 (2,833)
query : 1 - 2,386 (2,386/2,386)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17.5, extr 10, mito_pero 9.5, nucl 3,
cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213702)
HIX0213702
HIT000692116 (
ENST00000580196
)
(Conserved hypothetical protein.)
genome : 145,583,714 - 145,586,546 (2,833)
query : 1 - 2,386 (2,386/2,386)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17.5, extr 10, mito_pero 9.5, nucl 3,
cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213702)
HIX0199883
HIT000129006 (
ENST00000334513
)
(NUDIX hydrolase domain containing protein.)
genome : 145,586,115 - 145,589,439 (3,325)
query : 1 - 1,473 (1,473/1,473)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 6, lyso 4, cyto_nucl 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199883)
HIX0199883
HIT000693722 (
ENST00000581821
)
(NUDIX hydrolase domain containing protein.)
genome : 145,586,115 - 145,589,439 (3,325)
query : 1 - 1,473 (1,473/1,473)
8 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 6, lyso 4, cyto_nucl 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199883)
HIX0199883
HIT000098354
(
BC046352
)
Representative transcript
(NUDIX hydrolase domain containing protein.)
genome : 145,586,498 - 145,588,963 (2,466)
query : 1 - 729 (729/744)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.990)5'
coverage = 1.000
InterPro :
IPR000086 : NUDIX hydrolase domain
IPR015797 : NUDIX hydrolase domain-like
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 5.5, nucl 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199883)
HIX0199883
HIT000541949 (
ENST00000444015
)
(NUDIX hydrolase domain containing protein.)
genome : 145,586,484 - 145,588,963 (2,480)
query : 1 - 743 (743/743)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 5.5, nucl 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199883)
HIX0199883
HIT000689316 (
ENST00000577362
)
(NUDIX hydrolase domain containing protein.)
genome : 145,586,484 - 145,588,963 (2,480)
query : 1 - 743 (743/743)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 5.5, nucl 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199883)
HIX0199883
HIT000365183 (
NM_001012758
)
(NUDIX hydrolase domain containing protein.)
genome : 145,586,491 - 145,589,435 (2,945)
query : 1 - 1,093 (1,093/1,093)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 6, lyso 4, cyto_nucl 3, E.R._mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199883)
HIX0199883
HIT000016619
(
AK091752
)
(Conserved hypothetical protein.)
genome : 145,586,501 - 145,590,461 (3,961)
query : 1 - 2,342 (2,342/2,344)
4 exons
identity = 0.996
3'(1.000;1.000;0.971;0.997)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15, nucl 10, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199883)
HIX0199883
HIT000571771 (
ENST00000467151
)
(Conserved hypothetical protein.)
genome : 145,586,501 - 145,590,461 (3,961)
query : 1 - 2,342 (2,342/2,342)
4 exons
identity = 0.998
3'(1.000;1.000;0.971;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15, nucl 10, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199883)
HIX0199883
HIT000694200 (
ENST00000582306
)
(Conserved hypothetical protein.)
genome : 145,586,501 - 145,590,461 (3,961)
query : 1 - 2,342 (2,342/2,342)
4 exons
identity = 0.997
3'(1.000;1.000;0.971;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15, nucl 10, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199883)
HIX0199883
HIT000601426 (
ENST00000498192
)
(NUDIX hydrolase domain containing protein.)
genome : 145,586,804 - 145,589,097 (2,294)
query : 1 - 873 (873/873)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 14, nucl 10, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199883)
HIX0199883
HIT000693672 (
ENST00000581771
)
(NUDIX hydrolase domain containing protein.)
genome : 145,586,804 - 145,589,097 (2,294)
query : 1 - 873 (873/873)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;0.996;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 14, nucl 10, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199883)
HIX0199883
HIT000492707
(
AK298083
)
(NUDIX hydrolase domain containing protein.)
genome : 145,586,806 - 145,589,436 (2,631)
query : 1 - 1,422 (1,422/1,422)
5 exons
identity = 0.999
3'(1.000;1.000;0.996;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR000086 : NUDIX hydrolase domain
IPR015797 : NUDIX hydrolase domain-like
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15.5, cyto 10.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199883)
HIX0199883
HIT000582005 (
ENST00000477878
)
(NUDIX hydrolase domain containing protein.)
genome : 145,586,807 - 145,589,435 (2,629)
query : 1 - 1,028 (1,028/1,028)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 13.5, nucl 10.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199883)
HIX0199883
HIT000696815 (
ENST00000584953
)
(NUDIX hydrolase domain containing protein.)
genome : 145,586,807 - 145,589,435 (2,629)
query : 1 - 1,028 (1,028/1,028)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;0.996;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 13.5, nucl 10.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199883)
HIX0199883
HIT000565792 (
ENST00000460879
)
(NUDIX hydrolase domain containing protein.)
genome : 145,587,379 - 145,589,409 (2,031)
query : 1 - 638 (638/638)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15.5, cyto 10.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199883)
HIX0199883
HIT000695296 (
ENST00000583415
)
(NUDIX hydrolase domain containing protein.)
genome : 145,587,379 - 145,589,409 (2,031)
query : 1 - 638 (638/638)
4 exons
identity = 0.998
3'(1.000;1.000;0.996;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15.5, cyto 10.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199883)
HIX0028767
HIT000259300
(
BC053590
)
Representative transcript
(Conserved hypothetical protein.)
genome : 145,590,668 - 145,592,285 (1,618)
query : 14 - 1,627 (1,614/1,641)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 3, mito 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028767)
HIX0000978
HIT000031014
(
BC002586
)
Representative transcript
(DNA-directed RNA polymerase III subunit RPC3; RNA polymerase III subunit C3; DNA-directed RNA polymerase III subunit C; RNA polymerase III 62 kDa subunit; RPC62;)
genome : 145,592,605 - 145,610,884 (18,280)
query : 10 - 1,860 (1,851/1,897)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
InterPro :
IPR008806 : RNA polymerase III Rpc82, C -terminal
IPR013197 : RNA polymerase III subunit RPC82-related, helix-turn-helix
GO :
0003677 : Molecular Function : DNA binding
0003899 : Molecular Function : DNA-directed RNA polymerase activity
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14, nucl 11, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000978)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AF230105
Mus
sp. (Mouse) : AK016716
Danio
sp. (Zebrafish) : BC046092
Rattus
sp. (Rat) : BC083667
Bos
sp. (Cow) : BC109972
Tetraodon
sp. (Tetraodon) : CR694607
Oryzias
sp. (Medaka) : ENSORLT00000012709
Pongo
sp. (Orangutan) : ENSPPYT00000001126
Takifugu
sp. (Fugu) : SINFRUT00000131470
Pan
sp. (Chimpanzee) : XM_001161607
Monodelphis
sp. (Opossum) : XM_001368960
Equus
sp. (Horse) : XM_001499277
Canis
sp. (Dog) : XM_540277
HIX0000978
HIT000317045 (
NM_006468
)
(DNA-directed RNA polymerase III subunit RPC3; RNA polymerase III subunit C3; DNA-directed RNA polymerase III subunit C; RNA polymerase III 62 kDa subunit; RPC62;)
genome : 145,592,605 - 145,610,884 (18,280)
query : 1 - 1,851 (1,851/1,888)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14, nucl 11, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000978)
HIX0000978
HIT000031930
(
BC004424
)
(DNA-directed RNA polymerase III subunit RPC3; RNA polymerase III subunit C3; DNA-directed RNA polymerase III subunit C; RNA polymerase III 62 kDa subunit; RPC62;)
genome : 145,592,617 - 145,610,937 (18,321)
query : 1 - 1,590 (1,590/1,621)
12 exons
identity = 0.999
3'(1.000;1.000;0.984;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008806 : RNA polymerase III Rpc82, C -terminal
IPR013197 : RNA polymerase III subunit RPC82-related, helix-turn-helix
GO :
0003677 : Molecular Function : DNA binding
0003899 : Molecular Function : DNA-directed RNA polymerase activity
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 12, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000978)
HIX0000978
HIT000331193
(
AK223413
)
(DNA-directed RNA polymerase III subunit RPC3; RNA polymerase III subunit C3; DNA-directed RNA polymerase III subunit C; RNA polymerase III 62 kDa subunit; RPC62;)
genome : 145,592,611 - 145,610,627 (18,017)
query : 3 - 1,768 (1,766/1,784)
15 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.996;0.994;
1.000)5'
coverage = 0.999
InterPro :
IPR008806 : RNA polymerase III Rpc82, C -terminal
IPR013197 : RNA polymerase III subunit RPC82-related, helix-turn-helix
GO :
0003677 : Molecular Function : DNA binding
0003899 : Molecular Function : DNA-directed RNA polymerase activity
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.5, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000978)
HIX0000978
HIT000222678
(
U93867
)
(DNA-directed RNA polymerase III subunit RPC3; RNA polymerase III subunit C3; DNA-directed RNA polymerase III subunit C; RNA polymerase III 62 kDa subunit; RPC62;)
genome : 145,592,620 - 145,610,880 (18,261)
query : 1 - 1,826 (1,826/1,843)
15 exons
identity = 0.982
3'(0.980;1.000;1.000;0.980;0.967;0.967;1.000;
1.000;0.989;0.991;0.978;0.957;0.984;1.000;
0.964)5'
coverage = 1.000
InterPro :
IPR008806 : RNA polymerase III Rpc82, C -terminal
IPR013197 : RNA polymerase III subunit RPC82-related, helix-turn-helix
GO :
0003677 : Molecular Function : DNA binding
0003899 : Molecular Function : DNA-directed RNA polymerase activity
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.5, nucl 11.5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000978)
HIX0000978
HIT000128793 (
ENST00000334163
)
(DNA-directed RNA polymerase III subunit RPC3; RNA polymerase III subunit C3; DNA-directed RNA polymerase III subunit C; RNA polymerase III 62 kDa subunit; RPC62;)
genome : 145,592,605 - 145,610,884 (18,280)
query : 1 - 1,851 (1,851/1,851)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14, nucl 11, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000978)
HIX0000978
HIT000696241 (
ENST00000584371
)
(DNA-directed RNA polymerase III subunit RPC3; RNA polymerase III subunit C3; DNA-directed RNA polymerase III subunit C; RNA polymerase III 62 kDa subunit; RPC62;)
genome : 145,592,605 - 145,610,884 (18,280)
query : 1 - 1,851 (1,851/1,851)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14, nucl 11, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000978)
HIX0000978
HIT000350574 (
ENST00000369294
)
(DNA-directed RNA polymerase III subunit RPC3; RNA polymerase III subunit C3; DNA-directed RNA polymerase III subunit C; RNA polymerase III 62 kDa subunit; RPC62;)
genome : 145,592,617 - 145,610,937 (18,321)
query : 1 - 1,590 (1,590/1,590)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000978)
HIX0000978
HIT000692367 (
ENST00000580452
)
(DNA-directed RNA polymerase III subunit RPC3; RNA polymerase III subunit C3; DNA-directed RNA polymerase III subunit C; RNA polymerase III 62 kDa subunit; RPC62;)
genome : 145,592,617 - 145,610,937 (18,321)
query : 1 - 1,590 (1,590/1,590)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000978)
HIX0000978
HIT000084348
(
AY091463
)
(DNA-directed RNA polymerase III subunit RPC3; RNA polymerase III subunit C3; DNA-directed RNA polymerase III subunit C; RNA polymerase III 62 kDa subunit; RPC62;)
genome : 145,592,625 - 145,609,354 (16,730)
query : 1 - 1,688 (1,688/1,688)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008806 : RNA polymerase III Rpc82, C -terminal
IPR013197 : RNA polymerase III subunit RPC82-related, helix-turn-helix
GO :
0003677 : Molecular Function : DNA binding
0003899 : Molecular Function : DNA-directed RNA polymerase activity
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14, nucl 11, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000978)
HIX0000978
HIT000593040 (
ENST00000489436
)
(DNA-directed RNA polymerase III subunit RPC3; RNA polymerase III subunit C3; DNA-directed RNA polymerase III subunit C; RNA polymerase III 62 kDa subunit; RPC62;)
genome : 145,594,703 - 145,598,573 (3,871)
query : 1 - 820 (820/820)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 7, extr 4, mito 2, lyso 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000978)
HIX0000978
HIT000689727 (
ENST00000577777
)
(DNA-directed RNA polymerase III subunit RPC3; RNA polymerase III subunit C3; DNA-directed RNA polymerase III subunit C; RNA polymerase III 62 kDa subunit; RPC62;)
genome : 145,594,703 - 145,598,573 (3,871)
query : 1 - 820 (820/820)
5 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 7, extr 4, mito 2, lyso 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000978)
HIX0000978
HIT000583864 (
ENST00000479819
)
(Conserved hypothetical protein.)
genome : 145,595,119 - 145,595,595 (477)
query : 1 - 372 (372/372)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000978)
HIX0000978
HIT000690576 (
ENST00000578637
)
(Conserved hypothetical protein.)
genome : 145,595,119 - 145,595,595 (477)
query : 1 - 372 (372/372)
2 exons
identity = 0.997
3'(1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000978)
HIX0000978
HIT000575694 (
ENST00000471254
)
(DNA-directed RNA polymerase III subunit RPC3; RNA polymerase III subunit C3; DNA-directed RNA polymerase III subunit C; RNA polymerase III 62 kDa subunit; RPC62;)
genome : 145,598,256 - 145,611,025 (12,770)
query : 1 - 1,186 (1,186/1,186)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000978)
HIX0000978
HIT000691887 (
ENST00000579967
)
(DNA-directed RNA polymerase III subunit RPC3; RNA polymerase III subunit C3; DNA-directed RNA polymerase III subunit C; RNA polymerase III 62 kDa subunit; RPC62;)
genome : 145,598,256 - 145,611,025 (12,770)
query : 1 - 1,186 (1,186/1,186)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000978)
HIX0000978
HIT000570678 (
ENST00000466003
)
(DNA-directed RNA polymerase III subunit RPC3; RNA polymerase III subunit C3; DNA-directed RNA polymerase III subunit C; RNA polymerase III 62 kDa subunit; RPC62;)
genome : 145,601,756 - 145,610,730 (8,975)
query : 1 - 847 (847/847)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000978)
HIX0000978
HIT000690641 (
ENST00000578703
)
(DNA-directed RNA polymerase III subunit RPC3; RNA polymerase III subunit C3; DNA-directed RNA polymerase III subunit C; RNA polymerase III 62 kDa subunit; RPC62;)
genome : 145,601,756 - 145,610,730 (8,975)
query : 1 - 847 (847/847)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000978)
HIX0000978
HIT000447826
(
DQ581295
)
(Non-protein coding transcript.)
genome : 145,608,591 - 145,608,619 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000978)
HIX0023862
HIT000350571 (
ENST00000369291
)
(Conserved hypothetical protein.)
genome : 145,611,036 - 145,690,661 (79,626)
query : 1 - 3,560 (3,560/3,560)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, cyto 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023862)
HIX0023862
HIT000317124 (
NM_014455
)
(Conserved hypothetical protein.)
genome : 145,611,036 - 145,688,776 (77,741)
query : 1 - 1,675 (1,675/1,675)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, cyto 8, extr 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023862)
HIX0023862
HIT000243021
(
AF419857
)
Representative transcript
(E3 ubiquitin-protein ligase RNF115; EC=6.3.2.-; RING finger protein 115; Rabring 7; Zinc finger protein 364;)
genome : 145,611,036 - 145,688,727 (77,692)
query : 1 - 1,625 (1,625/1,629)
9 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.998
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, cyto 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023862)
HIX0023862
HIT000423546
(
AK290749
)
(E3 ubiquitin-protein ligase RNF115; EC=6.3.2.-; RING finger protein 115; Rabring 7; Zinc finger protein 364;)
genome : 145,611,041 - 145,688,667 (77,627)
query : 1 - 1,561 (1,561/1,561)
9 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, cyto 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023862)
HIX0023862
HIT000694583 (
ENST00000582693
)
(Conserved hypothetical protein.)
genome : 145,611,041 - 145,688,667 (77,627)
query : 1 - 1,561 (1,561/1,561)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, cyto 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023862)
HIX0023862
HIT000638413 (
ENST00000539368
)
(Conserved hypothetical protein.)
genome : 145,611,050 - 145,687,091 (76,042)
query : 1 - 1,025 (1,025/1,025)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16, nucl 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023862)
HIX0023862
HIT000243777
(
AF542552
)
(E3 ubiquitin-protein ligase RNF115; EC=6.3.2.-; RING finger protein 115; Rabring 7; Zinc finger protein 364;)
genome : 145,611,063 - 145,688,667 (77,605)
query : 3 - 1,541 (1,539/1,541)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, cyto 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023862)
HIX0023862
HIT000054059
(
BC054049
)
(E3 ubiquitin-protein ligase RNF115; EC=6.3.2.-; RING finger protein 115; Rabring 7; Zinc finger protein 364;)
genome : 145,611,182 - 145,688,334 (77,153)
query : 25 - 1,111 (1,087/1,125)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.978
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, cyto 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023862)
HIX0023862
HIT000261613
(
BC064903
)
(E3 ubiquitin-protein ligase RNF115; EC=6.3.2.-; RING finger protein 115; Rabring 7; Zinc finger protein 364;)
genome : 145,611,192 - 145,688,642 (77,451)
query : 1 - 1,385 (1,385/1,400)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, cyto 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023862)
HIX0023862
HIT000641783 (
ENST00000542738
)
(Conserved hypothetical protein.)
genome : 145,611,295 - 145,663,273 (51,979)
query : 1 - 470 (470/470)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 8, cyto_nucl 7.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023862)
HIX0023862
HIT000333908
(
BC022240
)
(E3 ubiquitin-protein ligase RNF115.)
genome : 145,661,234 - 145,688,698 (27,465)
query : 1 - 3,097 (3,097/3,282)
6 exons
identity = 0.996
5'(0.998;1.000;1.000;1.000;1.000;0.987)3'
coverage = 0.958
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15.5, cyto 6.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023862)
HIX0023862
HIT000250139
(
AL079314
)
(E3 ubiquitin-protein ligase RNF115.)
genome : 145,663,157 - 145,688,668 (25,512)
query : 2 - 1,147 (1,146/1,161)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14.5, cyto 6.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023862)
HIX0203575
HIT000448151_38
(
DQ581620
)
Representative transcript
(Non-protein coding transcript.)
genome : 145,668,736 - 145,668,766 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203575)
HIX0023862
HIT000250137
(
AL079312
)
(Hypothetical short protein.)
genome : 145,688,218 - 145,688,791 (574)
query : 1 - 569 (569/569)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, extr 10, cyto_plas 7, nucl 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023862)
HIX0000979
HIT000021506
(
AK096651
)
Representative transcript
(Conserved hypothetical protein.)
genome : 145,692,759 - 145,695,489 (2,731)
query : 1 - 2,731 (2,731/2,731)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 10, nucl 2.5, cyto_nucl 2.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000979)
HIX0000980
HIT000203593 (
NM_007053
)
(CD160 antigen; Natural killer cell receptor BY55; AltName: CD_antigen=CD160; Precursor;)
genome : 145,695,798 - 145,715,565 (19,768)
query : 1 - 1,559 (1,559/1,559)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 5.5, E.R._mito 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000980)
HIX0000980
HIT000104667 (
ENST00000235933
)
(CD160 antigen; Natural killer cell receptor BY55; AltName: CD_antigen=CD160; Precursor;)
genome : 145,695,798 - 145,706,861 (11,064)
query : 1 - 1,444 (1,444/1,444)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 5.5, E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000980)
HIX0000980
HIT000696311 (
ENST00000584442
)
(CD160 antigen; Natural killer cell receptor BY55; AltName: CD_antigen=CD160; Precursor;)
genome : 145,695,798 - 145,706,861 (11,064)
query : 1 - 1,444 (1,444/1,444)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 5.5, E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000980)
HIX0000980
HIT000036717
(
BC014465
)
Representative transcript
(CD160 antigen; Natural killer cell receptor BY55; AltName: CD_antigen=CD160; Precursor;)
genome : 145,695,932 - 145,715,565 (19,634)
query : 1 - 1,425 (1,425/1,444)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 5.5, E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000980)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK139789
Pongo
sp. (Orangutan) : ENSPPYT00000001128
Rattus
sp. (Rat) : XM_001063397
Macaca
sp. (Macaque) : XM_001089019
Equus
sp. (Horse) : XM_001496177
Pan
sp. (Chimpanzee) : XM_525213
Canis
sp. (Dog) : XM_540276
HIX0000980
HIT000048243
(
AK128370
)
(CD160 antigen precursor.)
genome : 145,695,933 - 145,715,614 (19,682)
query : 1 - 3,389 (3,389/3,389)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, plas 3, cyto 3, cyto_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000980)
HIX0000980
HIT000350570 (
ENST00000369290
)
(CD160 antigen precursor.)
genome : 145,695,933 - 145,715,614 (19,682)
query : 1 - 3,389 (3,389/3,389)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, plas 3, cyto 3, cyto_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000980)
HIX0000980
HIT000350568 (
ENST00000369288
)
(CD160 antigen; Natural killer cell receptor BY55; AltName: CD_antigen=CD160; Precursor;)
genome : 145,695,933 - 145,715,565 (19,633)
query : 1 - 1,421 (1,421/1,421)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 5.5, E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000980)
HIX0000980
HIT000064941
(
AF060981
)
(CD160 antigen; Natural killer cell receptor BY55; AltName: CD_antigen=CD160; Precursor;)
genome : 145,695,933 - 145,715,562 (19,630)
query : 1 - 1,425 (1,425/1,425)
6 exons
identity = 0.993
3'(0.985;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 5.5, E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000980)
HIX0000980
HIT000557565
(
EU016100
)
(CD160 antigen; Natural killer cell receptor BY55; AltName: CD_antigen=CD160; Precursor;)
genome : 145,698,786 - 145,706,758 (7,973)
query : 1 - 705 (705/705)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, E.R. 6.5, E.R._mito 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000980)
HIX0000980
HIT000503779 (
ENST00000401557
)
(CD160 antigen; Natural killer cell receptor BY55; AltName: CD_antigen=CD160; Precursor;)
genome : 145,698,947 - 145,715,614 (16,668)
query : 1 - 702 (702/704)
4 exons
identity = 0.997
3'(0.986;1.000;1.000;1.000)5'
coverage = 0.997
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 5.5, E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000980)
HIX0000980
HIT000268737
(
CR541867
)
(CD160 antigen; Natural killer cell receptor BY55; AltName: CD_antigen=CD160; Precursor;)
genome : 145,698,947 - 145,706,758 (7,812)
query : 1 - 544 (544/546)
3 exons
identity = 0.996
3'(0.986;1.000;1.000)5'
coverage = 0.996
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 5.5, E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000980)
HIX0000980
HIT000557566
(
EU016101
)
(CD160 antigen; Natural killer cell receptor BY55; AltName: CD_antigen=CD160; Precursor;)
genome : 145,698,947 - 145,706,758 (7,812)
query : 1 - 217 (217/219)
2 exons
identity = 0.991
3'(0.986;1.000)5'
coverage = 0.991
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000980)
HIX0000980
HIT000268758
(
CR541888
)
(CD160 antigen; Natural killer cell receptor BY55; AltName: CD_antigen=CD160; Precursor;)
genome : 145,698,948 - 145,706,758 (7,811)
query : 1 - 543 (543/543)
3 exons
identity = 0.996
3'(0.986;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 5.5, E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000980)
HIX0000981
HIT000541601 (
ENST00000443667
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3 isoform 2.)
genome : 145,726,918 - 145,754,150 (27,233)
query : 1 - 1,010 (1,010/1,010)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 12.5, nucl 6, extr 3, mito 3,
pero 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000981
HIT000694394 (
ENST00000582503
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3 isoform 2.)
genome : 145,726,918 - 145,754,150 (27,233)
query : 1 - 1,010 (1,010/1,010)
6 exons
identity = 0.999
5'(1.000;0.988;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 12.5, nucl 6, extr 3, mito 3,
pero 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000981
HIT000199501 (
NM_002614
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3; NHERF-3; CFTR-associated protein of 70 kDa; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3;)
genome : 145,727,666 - 145,764,207 (36,542)
query : 1 - 2,301 (2,301/2,301)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15, nucl 5.5, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000981
HIT000656764 (
NM_001201325
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3; NHERF-3; CFTR-associated protein of 70 kDa; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3;)
genome : 145,727,666 - 145,764,207 (36,542)
query : 1 - 2,230 (2,230/2,230)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15, nucl 5.5, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000981
HIT000656765 (
NM_001201326
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3; NHERF-3; CFTR-associated protein of 70 kDa; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3;)
genome : 145,727,666 - 145,764,207 (36,542)
query : 1 - 1,897 (1,897/1,897)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16, nucl 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000981
HIT000431966
(
AK313100
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3; NHERF-3; CFTR-associated protein of 70 kDa; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3;)
genome : 145,727,714 - 145,763,623 (35,910)
query : 1 - 1,598 (1,598/1,598)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.995;1.000;
0.997;1.000)3'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15, nucl 5.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000981
HIT000515105 (
ENST00000417171
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3; NHERF-3; CFTR-associated protein of 70 kDa; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3;)
genome : 145,727,724 - 145,764,067 (36,344)
query : 1 - 2,032 (2,032/2,032)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15, nucl 5.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000981
HIT000694916 (
ENST00000583035
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3; NHERF-3; CFTR-associated protein of 70 kDa; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3;)
genome : 145,727,724 - 145,764,067 (36,344)
query : 1 - 2,032 (2,032/2,032)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15, nucl 5.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000981
HIT000032876
(
BC006496
)
Representative transcript
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3; NHERF-3; CFTR-associated protein of 70 kDa; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3;)
genome : 145,727,726 - 145,764,073 (36,348)
query : 1 - 2,107 (2,107/2,131)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15, nucl 5.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF116896
Mus
sp. (Mouse) : AK029752
Bos
sp. (Cow) : BC102213
Pongo
sp. (Orangutan) : CR860088
Equus
sp. (Horse) : ENSECAT00000011869
Oryzias
sp. (Medaka) : ENSORLT00000022487
Pan
sp. (Chimpanzee) : ENSPTRT00000043415
Tetraodon
sp. (Tetraodon) : GSTENT00026016001
Takifugu
sp. (Fugu) : SINFRUT00000162624
Macaca
sp. (Macaque) : XM_001088677
Monodelphis
sp. (Opossum) : XM_001363492
Canis
sp. (Dog) : XM_533031
HIX0000981
HIT000032893
(
BC006518
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3; NHERF-3; CFTR-associated protein of 70 kDa; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3;)
genome : 145,727,726 - 145,764,073 (36,348)
query : 1 - 2,107 (2,107/2,131)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15, nucl 5.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000981
HIT000137400 (
ENST00000344770
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3; NHERF-3; CFTR-associated protein of 70 kDa; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3;)
genome : 145,743,263 - 145,764,074 (20,812)
query : 1 - 2,084 (2,084/2,084)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15, nucl 5.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000981
HIT000693029 (
ENST00000581121
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3; NHERF-3; CFTR-associated protein of 70 kDa; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3;)
genome : 145,743,263 - 145,764,074 (20,812)
query : 1 - 2,084 (2,084/2,084)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15, nucl 5.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000981
HIT000062238
(
AF012281
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3; NHERF-3; CFTR-associated protein of 70 kDa; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3;)
genome : 145,747,031 - 145,764,067 (17,037)
query : 20 - 2,037 (2,018/2,040)
8 exons
identity = 0.997
5'(0.987;1.000;0.993;1.000;1.000;1.000;1.000;
0.996)3'
coverage = 0.989
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15, nucl 5.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000981
HIT000492893
(
AK298269
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3; NHERF-3; CFTR-associated protein of 70 kDa; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3;)
genome : 145,747,031 - 145,763,793 (16,763)
query : 14 - 1,424 (1,411/1,424)
6 exons
identity = 0.997
5'(0.987;1.000;0.995;1.000;1.000;1.000)3'
coverage = 0.991
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000981
HIT000549862 (
ENST00000451928
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3; NHERF-3; CFTR-associated protein of 70 kDa; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3;)
genome : 145,747,031 - 145,763,793 (16,763)
query : 14 - 1,424 (1,411/1,424)
6 exons
identity = 0.998
5'(0.987;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000981
HIT000694226 (
ENST00000582332
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3; NHERF-3; CFTR-associated protein of 70 kDa; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3;)
genome : 145,747,031 - 145,763,793 (16,763)
query : 14 - 1,424 (1,411/1,424)
6 exons
identity = 0.998
5'(0.987;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000981
HIT000527471_03 (
ENST00000429537
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3; NHERF-3; CFTR-associated protein of 70 kDa; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3;)
genome : 145,761,303 - 145,764,073 (2,771)
query : 1 - 578 (578/578)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 12.5, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000981
HIT000689259 (
ENST00000577304
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3; NHERF-3; CFTR-associated protein of 70 kDa; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3;)
genome : 145,761,303 - 145,764,073 (2,771)
query : 1 - 578 (578/578)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 12.5, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000981
HIT000570286 (
ENST00000465595
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3; NHERF-3; CFTR-associated protein of 70 kDa; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3;)
genome : 145,761,349 - 145,764,072 (2,724)
query : 1 - 642 (642/642)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 16.3333, cyto_plas 14.3333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000981
HIT000690624 (
ENST00000578685
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3; NHERF-3; CFTR-associated protein of 70 kDa; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3;)
genome : 145,761,349 - 145,764,072 (2,724)
query : 1 - 642 (642/642)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 16.3333, cyto_plas 14.3333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000981
HIT000571042 (
ENST00000466386
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3; NHERF-3; CFTR-associated protein of 70 kDa; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3;)
genome : 145,762,211 - 145,764,074 (1,864)
query : 1 - 370 (370/370)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, extr 11, cyto_nucl 10.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000981
HIT000690689 (
ENST00000578751
)
(Na(+)/H(+) exchange regulatory cofactor NHE-RF3; NHERF-3; CFTR-associated protein of 70 kDa; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3;)
genome : 145,762,211 - 145,764,074 (1,864)
query : 1 - 370 (370/370)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, extr 11, cyto_nucl 10.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000981)
HIX0000982
HIT000119903 (
ENST00000313835
)
(Golgi pH regulator B; Protein GPR89B;)
genome : 145,764,411 - 145,827,073 (62,663)
query : 1 - 2,120 (2,120/2,120)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000694233 (
ENST00000582339
)
(Golgi pH regulator B; Protein GPR89B;)
genome : 145,764,411 - 145,827,073 (62,663)
query : 1 - 2,120 (2,120/2,120)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000262784
(
BC067816
)
(Golgi pH regulator A isoform 2.)
genome : 145,764,598 - 145,827,039 (62,442)
query : 4 - 1,922 (1,919/1,960)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR015672 : The Golgi pH Regulator
IPR022535 : Golgi pH regulator, conserved domain
IPR025969 : Abscisic acid G-protein coupled receptor-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000253010
(
AY358966
)
Representative transcript
(Golgi pH regulator B; Protein GPR89B;)
genome : 145,764,595 - 145,827,064 (62,470)
query : 18 - 1,941 (1,924/1,963)
14 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.991
InterPro :
IPR015672 : The Golgi pH Regulator
IPR022535 : Golgi pH regulator, conserved domain
IPR025969 : Abscisic acid G-protein coupled receptor-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ851452
Mus
sp. (Mouse) : AK034895
Bos
sp. (Cow) : BC120025
Monodelphis
sp. (Opossum) : ENSMODT00000023784
Oryzias
sp. (Medaka) : ENSORLT00000022481
Pongo
sp. (Orangutan) : ENSPPYT00000001130
Tetraodon
sp. (Tetraodon) : GSTENT00026017001
Takifugu
sp. (Fugu) : SINFRUT00000162626
Macaca
sp. (Macaque) : XM_001087524
Pan
sp. (Chimpanzee) : XM_001160689
Equus
sp. (Horse) : XM_001499085
Rattus
sp. (Rat) : XM_342301
Canis
sp. (Dog) : XM_854100
HIX0000982
HIT000485141 (
NM_001097612
)
(Golgi pH regulator B; Protein GPR89B;)
genome : 145,764,595 - 145,827,103 (62,509)
query : 1 - 1,966 (1,966/1,984)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000485142 (
NM_001097613
)
(Golgi pH regulator A isoform 2.)
genome : 145,764,595 - 145,827,103 (62,509)
query : 1 - 2,012 (2,012/2,030)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000659634 (
NR_036541
)
(Golgi pH regulator A isoform 2.)
genome : 145,764,595 - 145,827,103 (62,509)
query : 1 - 1,986 (1,986/2,004)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R._mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000031501
(
BC003187
)
(Golgi pH regulator B; Protein GPR89B;)
genome : 145,764,595 - 145,827,006 (62,412)
query : 1 - 1,869 (1,869/1,887)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR015672 : The Golgi pH Regulator
IPR022535 : Golgi pH regulator, conserved domain
IPR025969 : Abscisic acid G-protein coupled receptor-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000070934
(
AF132947
)
(Golgi pH regulator B; Protein GPR89B;)
genome : 145,764,598 - 145,827,032 (62,435)
query : 1 - 1,889 (1,889/1,906)
14 exons
identity = 0.997
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR015672 : The Golgi pH Regulator
IPR022535 : Golgi pH regulator, conserved domain
IPR025969 : Abscisic acid G-protein coupled receptor-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000005032
(
AK021758
)
(Golgi pH regulator A isoform 2.)
genome : 145,764,596 - 145,827,073 (62,478)
query : 1 - 1,955 (1,955/1,955)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000565209 (
ENST00000460277
)
(Golgi pH regulator A isoform 2.)
genome : 145,764,596 - 145,827,073 (62,478)
query : 1 - 1,955 (1,955/1,955)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000694274 (
ENST00000582382
)
(Golgi pH regulator A isoform 2.)
genome : 145,764,596 - 145,827,073 (62,478)
query : 1 - 1,955 (1,955/1,955)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000019083
(
AK094228
)
(Golgi pH regulator A isoform 2.)
genome : 145,764,596 - 145,788,795 (24,200)
query : 1 - 1,906 (1,906/1,906)
5 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR015672 : The Golgi pH Regulator
IPR025969 : Abscisic acid G-protein coupled receptor-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, E.R._mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000569893 (
ENST00000465185
)
(Golgi pH regulator A isoform 2.)
genome : 145,764,596 - 145,788,795 (24,200)
query : 1 - 1,906 (1,906/1,906)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000694791 (
ENST00000582906
)
(Golgi pH regulator A isoform 2.)
genome : 145,764,596 - 145,788,795 (24,200)
query : 1 - 1,906 (1,906/1,906)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000552357 (
ENST00000454423
)
(Golgi pH regulator A isoform 2.)
genome : 145,764,599 - 145,827,103 (62,505)
query : 1 - 1,982 (1,982/1,982)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000694514 (
ENST00000582624
)
(Golgi pH regulator A isoform 2.)
genome : 145,764,599 - 145,827,103 (62,505)
query : 1 - 1,982 (1,982/1,982)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000242161
(
AB097024
)
(Golgi pH regulator B; Protein GPR89B;)
genome : 145,764,599 - 145,827,044 (62,446)
query : 1 - 1,903 (1,903/1,903)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR015672 : The Golgi pH Regulator
IPR022535 : Golgi pH regulator, conserved domain
IPR025969 : Abscisic acid G-protein coupled receptor-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000242162
(
AB097025
)
(Golgi pH regulator B; Protein GPR89B;)
genome : 145,764,599 - 145,827,044 (62,446)
query : 1 - 1,903 (1,903/1,903)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR015672 : The Golgi pH Regulator
IPR022535 : Golgi pH regulator, conserved domain
IPR025969 : Abscisic acid G-protein coupled receptor-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000221445_03
(
U78723
)
(Golgi pH regulator B; Protein GPR89B;)
genome : 145,764,599 - 145,827,032 (62,434)
query : 1 - 1,891 (1,891/1,891)
14 exons
identity = 0.997
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR015672 : The Golgi pH Regulator
IPR022535 : Golgi pH regulator, conserved domain
IPR025969 : Abscisic acid G-protein coupled receptor-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000003828
(
AK001354
)
(Golgi pH regulator A isoform 2.)
genome : 145,764,599 - 145,790,953 (26,355)
query : 2 - 2,700 (2,699/2,700)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000597113 (
ENST00000493684
)
(Golgi pH regulator A isoform 2.)
genome : 145,764,599 - 145,790,953 (26,355)
query : 1 - 2,699 (2,699/2,699)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000690583 (
ENST00000578644
)
(Golgi pH regulator A isoform 2.)
genome : 145,764,599 - 145,790,953 (26,355)
query : 1 - 2,699 (2,699/2,699)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000331003
(
AK223223
)
(Golgi pH regulator B; Protein GPR89B;)
genome : 145,764,608 - 145,827,044 (62,437)
query : 1 - 1,900 (1,900/1,900)
14 exons
identity = 0.995
3'(0.998;0.985;1.000;0.990;1.000;1.000;0.950)5'
coverage = 1.000
InterPro :
IPR015672 : The Golgi pH Regulator
IPR022535 : Golgi pH regulator, conserved domain
IPR025969 : Abscisic acid G-protein coupled receptor-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000503137
(
BC146880
)
(Golgi pH regulator B; Protein GPR89B;)
genome : 145,764,755 - 145,827,024 (62,270)
query : 1 - 1,727 (1,727/1,727)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR015672 : The Golgi pH Regulator
IPR022535 : Golgi pH regulator, conserved domain
IPR025969 : Abscisic acid G-protein coupled receptor-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000499984
(
AK316371
)
(Golgi pH regulator A isoform 2.)
genome : 145,764,875 - 145,827,015 (62,141)
query : 1 - 1,644 (1,644/1,644)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR015672 : The Golgi pH Regulator
IPR022535 : Golgi pH regulator, conserved domain
IPR025969 : Abscisic acid G-protein coupled receptor-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000633558 (
ENST00000534502
)
(Golgi pH regulator A isoform 2.)
genome : 145,764,875 - 145,827,015 (62,141)
query : 1 - 1,644 (1,644/1,644)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000695113 (
ENST00000583232
)
(Golgi pH regulator A isoform 2.)
genome : 145,764,875 - 145,827,015 (62,141)
query : 1 - 1,644 (1,644/1,644)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000496563_01
(
AK301939
)
(Golgi pH regulator A isoform 2.)
genome : 145,764,881 - 145,826,450 (61,570)
query : 1 - 1,527 (1,527/1,527)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR015672 : The Golgi pH Regulator
IPR022535 : Golgi pH regulator, conserved domain
IPR025969 : Abscisic acid G-protein coupled receptor-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000567716_01 (
ENST00000462900
)
(Golgi pH regulator A isoform 2.)
genome : 145,764,881 - 145,826,450 (61,570)
query : 1 - 1,527 (1,527/1,527)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000689429_01 (
ENST00000577475
)
(Golgi pH regulator A isoform 2.)
genome : 145,764,881 - 145,826,450 (61,570)
query : 1 - 1,527 (1,527/1,527)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000099599_03
(
BT006679
)
(Golgi pH regulator B; Protein GPR89B;)
genome : 145,765,021 - 145,826,929 (61,909)
query : 1 - 1,366 (1,366/1,368)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR015672 : The Golgi pH Regulator
IPR022535 : Golgi pH regulator, conserved domain
IPR025969 : Abscisic acid G-protein coupled receptor-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000582799 (
ENST00000478703
)
(Golgi pH regulator A isoform 2.)
genome : 145,771,640 - 145,804,365 (32,726)
query : 1 - 662 (662/662)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000690277 (
ENST00000578333
)
(Golgi pH regulator A isoform 2.)
genome : 145,771,640 - 145,804,365 (32,726)
query : 1 - 662 (662/662)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000571237 (
ENST00000466593
)
(Golgi pH regulator A isoform 1.)
genome : 145,787,803 - 145,827,030 (39,228)
query : 1 - 919 (919/919)
8 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000695352 (
ENST00000583471
)
(Golgi pH regulator B.)
genome : 145,787,803 - 145,827,030 (39,228)
query : 1 - 919 (919/919)
8 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000628111 (
ENST00000528944
)
(Golgi pH regulator A isoform 2.)
genome : 145,787,821 - 145,827,036 (39,216)
query : 1 - 866 (866/866)
9 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14.5, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000691709 (
ENST00000579785
)
(Golgi pH regulator A isoform 2.)
genome : 145,787,821 - 145,827,036 (39,216)
query : 1 - 866 (866/866)
9 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14.5, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000595889 (
ENST00000492401
)
(Golgi pH regulator A isoform 2.)
genome : 145,789,111 - 145,804,338 (15,228)
query : 1 - 567 (567/567)
4 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000694453 (
ENST00000582562
)
(Golgi pH regulator A isoform 2.)
genome : 145,789,111 - 145,804,338 (15,228)
query : 1 - 567 (567/567)
4 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0000982
HIT000491769
(
AK297145
)
(Golgi pH regulator A isoform 2.)
genome : 145,791,138 - 145,827,103 (35,966)
query : 1 - 844 (844/844)
8 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR022535 : Golgi pH regulator, conserved domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, E.R._mito 8.33333, extr 8, cyto_mito 7.5,
cyto 3.5, E.R. 3.5, plas 3, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000982)
HIX0203911
HIT000490263
(
AK295639
)
(Neuroblastoma breakpoint family member 14;)
&nbs