bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0001103
HIT000042281
(
D63478
)
(Ubiquitin-associated protein 2-like isoform b.)
genome : 154,192,655 - 154,235,981 (43,327)
query : 1 - 3,411 (3,411/3,411)
25 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.967;
0.977;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR009060 : UBA-like
IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
IPR022166 : Protein of unknown function DUF3697, ubiquitin-associated protein 2
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000136445 (
ENST00000343815
)
(Ubiquitin-associated protein 2-like isoform b.)
genome : 154,192,655 - 154,235,981 (43,327)
query : 1 - 3,411 (3,411/3,411)
25 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.967;
0.977;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000559244 (
NM_001127320
)
(Ubiquitin-associated protein 2-like isoform b.)
genome : 154,192,655 - 154,235,980 (43,326)
query : 1 - 3,410 (3,410/3,410)
25 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.967;
0.977;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000205135 (
NM_014847
)
(Ubiquitin-associated protein 2-like; Protein NICE-4;)
genome : 154,193,325 - 154,243,329 (50,005)
query : 1 - 3,989 (3,989/4,006)
27 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.967;
0.977;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000526865 (
ENST00000428931
)
(Ubiquitin-associated protein 2-like; Protein NICE-4;)
genome : 154,193,325 - 154,243,328 (50,004)
query : 1 - 3,988 (3,988/3,988)
27 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.967;
0.977;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000539824 (
ENST00000441890
)
(Ubiquitin-associated protein 2-like isoform a.)
genome : 154,193,361 - 154,207,770 (14,410)
query : 1 - 678 (678/678)
6 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000497286
(
AK302662
)
Representative transcript
(Ubiquitin-associated protein 2-like isoform a.)
genome : 154,193,392 - 154,243,486 (50,095)
query : 2 - 3,429 (3,428/3,565)
27 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.967;
0.977;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009060 : UBA-like
IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
IPR022166 : Protein of unknown function DUF3697, ubiquitin-associated protein 2
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC029075
Rattus
sp. (Rat) : BC097468
Bos
sp. (Cow) : BT029792
Gallus
sp. (Chicken) : CR353229
Danio
sp. (Zebrafish) : ENSDART00000092138
Equus
sp. (Horse) : ENSECAT00000006859
Oryzias
sp. (Medaka) : ENSORLT00000000521
Pongo
sp. (Orangutan) : ENSPPYT00000000945
Tetraodon
sp. (Tetraodon) : GSTENT00032597001
Takifugu
sp. (Fugu) : SINFRUT00000160957
Macaca
sp. (Macaque) : XM_001113948
Monodelphis
sp. (Opossum) : XM_001366105
Canis
sp. (Dog) : XM_860202
Pan
sp. (Chimpanzee) : XR_023996
HIX0001103
HIT000110798 (
ENST00000271877
)
(Ubiquitin-associated protein 2-like isoform a.)
genome : 154,193,392 - 154,243,485 (50,094)
query : 1 - 3,427 (3,427/3,427)
27 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.967;
0.977;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000498157
(
AK303533
)
(Ubiquitin-associated protein 2-like isoform b.)
genome : 154,193,398 - 154,235,776 (42,379)
query : 1 - 3,173 (3,173/3,173)
25 exons
identity = 0.997
5'(0.991;1.000;1.000;1.000;1.000;1.000;0.967;
0.977;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR009060 : UBA-like
IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
IPR022166 : Protein of unknown function DUF3697, ubiquitin-associated protein 2
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000510530 (
ENST00000412596
)
(Ubiquitin-associated protein 2-like isoform a.)
genome : 154,193,419 - 154,215,778 (22,360)
query : 1 - 980 (980/980)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000349784 (
ENST00000368504
)
(Ubiquitin-associated protein 2-like isoform a.)
genome : 154,193,423 - 154,218,855 (25,433)
query : 1 - 1,120 (1,120/1,120)
11 exons
identity = 0.994
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.967;
0.977)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000535586 (
ENST00000437652
)
(Ubiquitin-associated protein 2-like isoform a.)
genome : 154,193,443 - 154,215,754 (22,312)
query : 1 - 911 (911/911)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000245544
(
AJ243668
)
(Ubiquitin-associated protein 2-like isoform a.)
genome : 154,193,444 - 154,207,199 (13,756)
query : 1 - 523 (523/523)
5 exons
identity = 0.996
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000449 : Ubiquitin-associated domain/translation elongation factor EF-Ts, N-terminal
IPR009060 : UBA-like
IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, nucl 8.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000554259 (
ENST00000456325
)
(Ubiquitin-associated protein 2-like isoform a.)
genome : 154,193,804 - 154,209,612 (15,809)
query : 1 - 812 (812/812)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000044167
(
AK124294
)
(Ubiquitin-associated protein 2-like isoform a.)
genome : 154,193,814 - 154,235,978 (42,165)
query : 1 - 1,725 (1,725/1,725)
15 exons
identity = 0.987
5'(1.000;0.820;0.980;1.000;1.000;0.990;1.000;
0.981;1.000;1.000;0.991;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000031487
(
BC003170
)
(Ubiquitin-associated protein 2-like; Protein NICE-4;)
genome : 154,197,558 - 154,243,329 (45,772)
query : 8 - 3,872 (3,865/3,889)
26 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.967;
0.977;1.000;0.996;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 0.998
InterPro :
IPR009060 : UBA-like
IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
IPR022166 : Protein of unknown function DUF3697, ubiquitin-associated protein 2
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000314806 (
ENST00000361546
)
(Ubiquitin-associated protein 2-like; Protein NICE-4;)
genome : 154,197,558 - 154,243,329 (45,772)
query : 1 - 3,864 (3,864/3,864)
26 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.967;
0.977;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000497577
(
AK302953
)
(Ubiquitin-associated protein 2-like isoform a.)
genome : 154,201,095 - 154,235,796 (34,702)
query : 1 - 2,981 (2,981/2,981)
22 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.967;
0.971;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR022166 : Protein of unknown function DUF3697, ubiquitin-associated protein 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000570837 (
ENST00000466173
)
(Ubiquitin-associated protein 2-like isoform a.)
genome : 154,215,421 - 154,223,576 (8,156)
query : 16 - 804 (789/804)
4 exons
identity = 0.991
5'(0.992;0.977;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, extr 3, cyto_nucl 3, nucl 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0203855
HIT000616411 (
ENST00000517008
)
(Non-protein coding transcript.)
genome : 154,226,921 - 154,226,997 (77)
query : 1 - 77 (77/77)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203855)
HIX0001103
HIT000599035 (
ENST00000495676
)
(Ubiquitin-associated protein 2-like isoform a.)
genome : 154,227,123 - 154,232,459 (5,337)
query : 1 - 867 (867/867)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000592692 (
ENST00000489076
)
(Ubiquitin-associated protein 2-like isoform a.)
genome : 154,227,723 - 154,230,322 (2,600)
query : 1 - 850 (850/850)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 14.5, cyto 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000245546
(
AJ243670
)
(Ubiquitin-associated protein 2-like isoform a.)
genome : 154,227,728 - 154,243,986 (16,259)
query : 1 - 1,789 (1,789/1,793)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000531549 (
ENST00000433615
)
(Ubiquitin-associated protein 2-like isoform a.)
genome : 154,227,728 - 154,243,986 (16,259)
query : 1 - 1,789 (1,789/1,789)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000526529 (
ENST00000428595
)
(Ubiquitin-associated protein 2-like isoform b.)
genome : 154,229,547 - 154,243,040 (13,494)
query : 1 - 1,419 (1,419/1,419)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 15, cyto 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000245545
(
AJ243669
)
(Ubiquitin-associated protein 2-like isoform b.)
genome : 154,229,659 - 154,243,323 (13,665)
query : 1 - 1,589 (1,589/1,593)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 15, cyto 6, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000570537 (
ENST00000465855
)
(Ubiquitin-associated protein 2-like isoform a.)
genome : 154,229,821 - 154,234,175 (4,355)
query : 1 - 684 (684/684)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000588533 (
ENST00000484696
)
(Ubiquitin-associated protein 2-like isoform a.)
genome : 154,231,107 - 154,233,496 (2,390)
query : 1 - 611 (611/611)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 9, cyto_nucl 8.5, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000345866 (
ENST00000364259
)
(Non-protein coding transcript.)
genome : 154,232,203 - 154,232,338 (136)
query : 1 - 136 (136/136)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000579618 (
ENST00000475373
)
(Ubiquitin-associated protein 2; UBAP-2;)
genome : 154,232,212 - 154,235,798 (3,587)
query : 1 - 838 (838/838)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14, cyto 8, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000597286 (
ENST00000493867
)
(Ubiquitin-associated protein 2-like isoform a.)
genome : 154,234,104 - 154,243,649 (9,546)
query : 1 - 677 (677/677)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15, cyto 8.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000245015
(
AJ227866
)
(Non-protein coding transcript.)
genome : 154,235,976 - 154,236,277 (302)
query : 1 - 300 (300/300)
1 exon
identity = 0.980
5'(0.980)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0001103
HIT000588649 (
ENST00000484819
)
(Ubiquitin-associated protein 2-like isoform a.)
genome : 154,238,928 - 154,242,171 (3,244)
query : 1 - 1,056 (1,056/1,056)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 13, extr_plas 10.5, cyto 7, extr 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001103)
HIX0199953
HIT000032312
(
BC005240
)
Representative transcript
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,244,987 - 154,248,348 (3,362)
query : 1 - 1,224 (1,224/1,256)
7 exons
identity = 0.999
5'(1.000;0.996;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.8333, nucl 11, mito 8, cyto 6.5,
cyto_pero 5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK088746
Danio
sp. (Zebrafish) : BC075929
Bos
sp. (Cow) : BC112670
Tetraodon
sp. (Tetraodon) : CR727366
Pongo
sp. (Orangutan) : ENSPPYT00000000943
Takifugu
sp. (Fugu) : SINFRUT00000177873
Macaca
sp. (Macaque) : XM_001114308
Monodelphis
sp. (Opossum) : XM_001366272
Equus
sp. (Horse) : XM_001496771
Pan
sp. (Chimpanzee) : XM_513839
Canis
sp. (Dog) : XM_537258
HIX0199953
HIT000125700 (
ENST00000328703
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,244,987 - 154,248,351 (3,365)
query : 1 - 1,227 (1,227/1,227)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.8333, nucl 11, mito 8, cyto 6.5,
cyto_pero 5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000202739 (
NM_006118
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,039 - 154,248,350 (3,312)
query : 1 - 1,174 (1,174/1,196)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.8333, nucl 11, mito 8, cyto 6.5,
cyto_pero 5, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000221056
(
U68566
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,041 - 154,248,350 (3,310)
query : 3 - 1,174 (1,172/1,196)
7 exons
identity = 0.997
5'(1.000;0.996;1.000;1.000;0.981;1.000;1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.8333, nucl 11, mito 8, cyto 6.5,
cyto_pero 5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000365647 (
NM_001018837
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,039 - 154,248,350 (3,312)
query : 1 - 1,030 (1,030/1,052)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 9, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000555852 (
ENST00000457918
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,065 - 154,248,260 (3,196)
query : 1 - 914 (914/914)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 9, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000495300
(
AK300676
)
(HCLS1-associated protein X-1 isoform b.)
genome : 154,245,085 - 154,248,349 (3,265)
query : 1 - 1,151 (1,151/1,151)
7 exons
identity = 0.999
5'(1.000;0.996;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.8333, nucl 11, mito 9, cyto 6.5,
cyto_pero 5, extr 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000587838 (
ENST00000483970
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,085 - 154,248,349 (3,265)
query : 1 - 1,151 (1,151/1,151)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.8333, nucl 11, mito 9, cyto 6.5,
cyto_pero 5, extr 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000545702 (
ENST00000447768
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,096 - 154,248,139 (3,044)
query : 1 - 842 (842/842)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 16, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000037656
(
BC016730
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,105 - 154,248,350 (3,246)
query : 5 - 1,112 (1,108/1,141)
7 exons
identity = 0.998
5'(1.000;1.000;0.989;1.000;1.000;1.000;1.000)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.8333, nucl 10, mito 8, cyto 7.5,
cyto_pero 5.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000484723
(
EU190982
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,105 - 154,248,350 (3,246)
query : 1 - 1,283 (1,283/1,305)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto_nucl 5.5, nucl 4.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000630563 (
ENST00000531435
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,105 - 154,248,351 (3,247)
query : 1 - 1,284 (1,284/1,284)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto_nucl 5.5, nucl 4.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000432157
(
AK313291
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,105 - 154,248,177 (3,073)
query : 1 - 932 (932/932)
7 exons
identity = 0.996
5'(0.993;0.989;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.8333, nucl 11, mito 8, cyto 6.5,
cyto_pero 5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000488922
(
AK294298
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,113 - 154,247,748 (2,636)
query : 1 - 1,089 (1,089/1,089)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto_nucl 9, cyto 7.5, nucl 5.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000581912 (
ENST00000477780
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,113 - 154,247,748 (2,636)
query : 1 - 1,089 (1,089/1,089)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto_nucl 9, cyto 7.5, nucl 5.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000423423
(
AK290626
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,117 - 154,248,292 (3,176)
query : 1 - 1,038 (1,038/1,038)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.8333, nucl 11, mito 8, cyto 6.5,
cyto_pero 5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000036635
(
BC014314
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,122 - 154,248,351 (3,230)
query : 5 - 1,096 (1,092/1,147)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.977
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.8333, nucl 11, mito 8, cyto 6.5,
cyto_pero 5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000428866
(
AK310000
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,119 - 154,248,288 (3,170)
query : 1 - 955 (955/955)
7 exons
identity = 0.997
5'(0.993;1.000;1.000;0.981;1.000;1.000;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 16, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000430316
(
AK311450
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,125 - 154,248,349 (3,225)
query : 1 - 492 (492/492)
3 exons
identity = 0.967
5'(0.920;0.948;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_nucl 6.5, nucl 5.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000484724
(
EU190983
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,128 - 154,248,350 (3,223)
query : 1 - 1,091 (1,091/1,113)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 16, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000631216 (
ENST00000532105
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,144 - 154,248,315 (3,172)
query : 1 - 771 (771/771)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 16, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000533021 (
ENST00000435087
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,144 - 154,247,959 (2,816)
query : 1 - 822 (822/822)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, mito 11, cyto 9.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000037055
(
BC015209
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,146 - 154,248,350 (3,205)
query : 1 - 1,067 (1,067/1,082)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.8333, nucl 11, mito 8, cyto 6.5,
cyto_pero 5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000575762 (
ENST00000471326
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,245,344 - 154,247,960 (2,617)
query : 1 - 1,170 (1,170/1,170)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 14, cyto 7.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000596032 (
ENST00000492550
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,246,345 - 154,248,349 (2,005)
query : 1 - 733 (733/733)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 16, extr 6, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0199953
HIT000564862 (
ENST00000459914
)
(HCLS1-associated protein X-1; HS1-associating protein X-1; HAX-1; HS1-binding protein 1; HSP1BP-1;)
genome : 154,246,374 - 154,248,351 (1,978)
query : 1 - 726 (726/726)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199953)
HIX0203844
HIT000616276 (
ENST00000516873
)
(Non-protein coding transcript.)
genome : 154,260,936 - 154,261,003 (68)
query : 1 - 68 (68/68)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203844)
HIX0200012
HIT000309374 (
ENST00000355197
)
(Aquaporin-3; AQP-3; 31.4 kDa water channel protein; Aquaglyceroporin-3;)
genome : 154,293,566 - 154,296,518 (2,953)
query : 1 - 882 (882/882)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30.5, extr_plas 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200012)
HIX0200012
HIT000433859
(
AK314993
)
(Aquaporin-10; AQP-10; Aquaglyceroporin-10; Small intestine aquaporin;)
genome : 154,293,569 - 154,296,956 (3,388)
query : 1 - 969 (969/969)
6 exons
identity = 0.998
5'(1.000;1.000;0.993;0.992;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000425 : Major intrinsic protein
IPR022357 : Major intrinsic protein, conserved site
IPR023271 : Aquaporin-like
IPR026252 : Aquaporin 10
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0006833 : Biological Process : water transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200012)
HIX0200012
HIT000060567
(
AB066105
)
Representative transcript
(Aquaporin-10; AQP-10; Aquaglyceroporin-10; Small intestine aquaporin;)
genome : 154,293,592 - 154,297,801 (4,210)
query : 1 - 1,787 (1,787/1,790)
6 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;0.991;0.993)3'
coverage = 0.998
InterPro :
IPR000425 : Major intrinsic protein
IPR022357 : Major intrinsic protein, conserved site
IPR023271 : Aquaporin-like
IPR026252 : Aquaporin 10
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0006833 : Biological Process : water transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200012)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : ENSBTAT00000006790
Oryzias
sp. (Medaka) : ENSORLT00000000413
Oryzias
sp. (Medaka) : ENSORLT00000011131
Pongo
sp. (Orangutan) : ENSPPYT00000000942
Tetraodon
sp. (Tetraodon) : GSTENT00017719001
Tetraodon
sp. (Tetraodon) : GSTENT00032599001
Takifugu
sp. (Fugu) : SINFRUT00000129418
Pan
sp. (Chimpanzee) : XM_001151333
Monodelphis
sp. (Opossum) : XM_001372888
Equus
sp. (Horse) : XM_001493985
Gallus
sp. (Chicken) : XM_424498
Danio
sp. (Zebrafish) : XM_693638
Canis
sp. (Dog) : XM_850021
HIX0200012
HIT000211787 (
NM_080429
)
(Aquaporin-10; AQP-10; Aquaglyceroporin-10; Small intestine aquaporin;)
genome : 154,293,592 - 154,297,801 (4,210)
query : 1 - 1,791 (1,791/1,794)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200012)
HIX0200012
HIT000124050 (
ENST00000324978
)
(Aquaporin-10; AQP-10; Aquaglyceroporin-10; Small intestine aquaporin;)
genome : 154,293,592 - 154,297,801 (4,210)
query : 1 - 1,791 (1,791/1,791)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200012)
HIX0200012
HIT000263758
(
BC069607
)
(Aquaporin-10; AQP-10; Aquaglyceroporin-10; Small intestine aquaporin;)
genome : 154,293,592 - 154,297,047 (3,456)
query : 1 - 1,037 (1,037/1,037)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.995;1.000)3'
coverage = 1.000
InterPro :
IPR000425 : Major intrinsic protein
IPR022357 : Major intrinsic protein, conserved site
IPR023271 : Aquaporin-like
IPR026252 : Aquaporin 10
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0006833 : Biological Process : water transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200012)
HIX0200012
HIT000265403
(
BC074896
)
(Aquaporin-10; AQP-10; Aquaglyceroporin-10; Small intestine aquaporin;)
genome : 154,293,595 - 154,296,990 (3,396)
query : 1 - 977 (977/977)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000425 : Major intrinsic protein
IPR022357 : Major intrinsic protein, conserved site
IPR023271 : Aquaporin-like
IPR026252 : Aquaporin 10
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0006833 : Biological Process : water transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200012)
HIX0200012
HIT000265404
(
BC074897
)
(Aquaporin-10; AQP-10; Aquaglyceroporin-10; Small intestine aquaporin;)
genome : 154,293,595 - 154,296,990 (3,396)
query : 1 - 977 (977/977)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000425 : Major intrinsic protein
IPR022357 : Major intrinsic protein, conserved site
IPR023271 : Aquaporin-like
IPR026252 : Aquaporin 10
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0006833 : Biological Process : water transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200012)
HIX0200012
HIT000072033
(
AF159174
)
(Aquaporin-10; AQP-10; Aquaglyceroporin-10; Small intestine aquaporin;)
genome : 154,293,596 - 154,297,801 (4,206)
query : 1 - 2,262 (2,262/2,300)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000425 : Major intrinsic protein
IPR022357 : Major intrinsic protein, conserved site
IPR023271 : Aquaporin-like
IPR026252 : Aquaporin 10
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0006833 : Biological Process : water transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200012)
HIX0200012
HIT000588693 (
ENST00000484864
)
(Aquaporin-10; AQP-10; Aquaglyceroporin-10; Small intestine aquaporin;)
genome : 154,293,596 - 154,297,801 (4,206)
query : 1 - 2,262 (2,262/2,262)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200012)
HIX0001104
HIT000263418
(
BC069264
)
(Probable phospholipid-transporting ATPase ID; EC=3.6.3.1; ATPase class I type 8B member 2;)
genome : 154,298,029 - 154,310,321 (12,293)
query : 1 - 1,522 (1,522/1,567)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR006539 : P-type ATPase, subfamily IV
IPR008250 : P-type ATPase, A domain
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0046872 : Molecular Function : metal ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001104)
HIX0001104
HIT000349767 (
ENST00000368487
)
(P-type ATPase, subfamily IV protein.)
genome : 154,298,029 - 154,310,322 (12,294)
query : 1 - 1,523 (1,523/1,523)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001104)
HIX0001104
HIT000316263 (
NM_001005855
)
(P-type ATPase, subfamily IV protein.)
genome : 154,298,036 - 154,310,321 (12,286)
query : 1 - 1,515 (1,515/1,560)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001104)
HIX0001104
HIT000349770 (
ENST00000368490
)
(Conserved hypothetical protein.)
genome : 154,298,081 - 154,303,178 (5,098)
query : 1 - 473 (473/473)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001104)
HIX0001104
HIT000322204
(
X58235
)
(Non-protein coding transcript.)
genome : 154,298,085 - 154,300,637 (2,553)
query : 2 - 149 (148/149)
2 exons
identity = 0.974
5'(0.957;1.000)3'
coverage = 0.993
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001104)
HIX0001104
HIT000011500
(
AK054886
)
Representative transcript
(Probable phospholipid-transporting ATPase ID; EC=3.6.3.1; ATPase class I type 8B member 2;)
genome : 154,301,275 - 154,314,264 (12,990)
query : 1 - 2,118 (2,118/2,118)
13 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.985;0.986;1.000)3'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR006539 : P-type ATPase, subfamily IV
IPR008250 : P-type ATPase, A domain
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0046872 : Molecular Function : metal ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001104)
HIX0001104
HIT000134452 (
ENST00000341822
)
(P-type ATPase, subfamily IV protein.)
genome : 154,301,275 - 154,314,264 (12,990)
query : 1 - 2,111 (2,111/2,111)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001104)
HIX0001104
HIT000524379 (
ENST00000426445
)
(P-type ATPase, subfamily IV protein.)
genome : 154,301,275 - 154,314,264 (12,990)
query : 1 - 2,118 (2,118/2,118)
13 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.985;0.986;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001104)
HIX0001104
HIT000613627 (
ENST00000514107
)
(Non-protein coding transcript.)
genome : 154,303,963 - 154,304,455 (493)
query : 1 - 218 (218/218)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001104)
HIX0213796
HIT000086928
(
BC007837
)
(P-type ATPase, subfamily IV protein.)
genome : 154,315,270 - 154,321,876 (6,607)
query : 3 - 2,572 (2,570/2,589)
14 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR023214 : HAD-like domain
IPR023299 : P-type ATPase, cytoplasmic domain N
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213796)
HIX0213796
HIT000096763
(
BC041573
)
Representative transcript
(P-type ATPase, subfamily IV protein.)
genome : 154,315,270 - 154,321,876 (6,607)
query : 3 - 2,572 (2,570/2,589)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR023214 : HAD-like domain
IPR023299 : P-type ATPase, cytoplasmic domain N
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213796)
HIX0213796
HIT000499430
(
AK304806
)
(P-type ATPase family protein.)
genome : 154,316,649 - 154,321,854 (5,206)
query : 1 - 1,880 (1,880/1,880)
10 exons
identity = 0.999
5'(1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR023214 : HAD-like domain
GO :
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213796)
HIX0213796
HIT000261234
(
BC063858
)
(P-type ATPase, subfamily IV protein.)
genome : 154,318,730 - 154,323,780 (5,051)
query : 1 - 2,957 (2,957/2,971)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR006539 : P-type ATPase, subfamily IV
GO :
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213796)
HIX0213796
HIT000092119
(
BC030288
)
(P-type ATPase, subfamily IV protein.)
genome : 154,318,804 - 154,322,028 (3,225)
query : 9 - 1,140 (1,132/1,154)
4 exons
identity = 0.999
5'(0.993;1.000;1.000;1.000)3'
coverage = 0.993
InterPro :
IPR006539 : P-type ATPase, subfamily IV
GO :
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213796)
HIX0213796
HIT000605984 (
ENST00000505882
)
(Conserved hypothetical protein.)
genome : 154,319,091 - 154,321,935 (2,845)
query : 1 - 895 (895/895)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, E.R. 4.5, E.R._mito 4.5, extr 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213796)
HIX0213796
HIT000025825
(
AL137537
)
(P-type ATPase, subfamily IV protein.)
genome : 154,321,308 - 154,322,144 (837)
query : 9 - 847 (839/913)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 0.991
InterPro :
IPR006539 : P-type ATPase, subfamily IV
GO :
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213796)
HIX0161317
HIT000547568 (
ENST00000449634
)
(Ribosomal protein S27/S33, mitochondrial family protein.)
genome : 154,349,442 - 154,351,749 (2,308)
query : 1 - 317 (317/317)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 9, extr 7, E.R._mito 7, mito_pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161317)
HIX0178144
HIT000583302_01 (
ENST00000479228
)
(Ribosomal protein S2 family protein.)
genome : 154,350,676 - 154,351,563 (888)
query : 1 - 888 (888/888)
1 exon
identity = 0.961
3'(0.961)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.5, nucl 5.5, mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178144)
HIX0178144
HIT000588725_01 (
ENST00000484897
)
(Ribosomal protein S2, eukaryotic/archaeal family protein.)
genome : 154,350,678 - 154,351,563 (886)
query : 1 - 886 (886/886)
1 exon
identity = 0.951
3'(0.951)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.5, cyto 9.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178144)
HIX0178144
HIT000535270 (
ENST00000437336
)
(Ribosomal protein S2 family protein.)
genome : 154,350,683 - 154,351,565 (883)
query : 1 - 883 (883/883)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 13, mito 6.5, E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178144)
HIX0178144
HIT000451842_05
(
DQ585311
)
Representative transcript
(Non-protein coding transcript.)
genome : 154,351,099 - 154,351,129 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178144)
HIX0029320
HIT000096736
(
BC041469
)
Representative transcript
(Conserved hypothetical protein.)
genome : 154,374,800 - 154,379,040 (4,241)
query : 1 - 1,760 (1,760/1,791)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 7, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029320)
HIX0029320
HIT000522369 (
ENST00000424435
)
(Conserved hypothetical protein.)
genome : 154,374,804 - 154,379,040 (4,237)
query : 1 - 1,756 (1,756/1,756)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029320)
HIX0028742
HIT000197598 (
NM_000565
)
(Interleukin-6 receptor subunit alpha; IL-6 receptor subunit alpha; IL-6R subunit alpha; IL-6R-alpha; IL-6RA; IL-6R 1; Membrane glycoprotein 80; gp80; AltName: CD_antigen=CD126; Precursor;)
genome : 154,377,669 - 154,441,926 (64,258)
query : 1 - 5,914 (5,914/5,928)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, extr_plas 13.5, plas 6, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028742)
HIX0028742
HIT000318294 (
NM_181359
)
(Interleukin-6 receptor subunit alpha; IL-6 receptor subunit alpha; IL-6R subunit alpha; IL-6R-alpha; IL-6RA; IL-6R 1; Membrane glycoprotein 80; gp80; AltName: CD_antigen=CD126; Precursor;)
genome : 154,377,669 - 154,441,926 (64,258)
query : 1 - 5,820 (5,820/5,834)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24.5, extr_plas 13.5, cyto 2, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028742)
HIX0028742
HIT000349765 (
ENST00000368485
)
(Interleukin-6 receptor subunit alpha; IL-6 receptor subunit alpha; IL-6R subunit alpha; IL-6R-alpha; IL-6RA; IL-6R 1; Membrane glycoprotein 80; gp80; AltName: CD_antigen=CD126; Precursor;)
genome : 154,377,669 - 154,441,926 (64,258)
query : 1 - 5,914 (5,914/5,914)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, extr_plas 13.5, plas 6, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028742)
HIX0028742
HIT000321327
(
X12830
)
Representative transcript
(Interleukin-6 receptor subunit alpha; IL-6 receptor subunit alpha; IL-6R subunit alpha; IL-6R-alpha; IL-6RA; IL-6R 1; Membrane glycoprotein 80; gp80; AltName: CD_antigen=CD126; Precursor;)
genome : 154,377,669 - 154,439,327 (61,659)
query : 1 - 3,319 (3,319/3,319)
10 exons
identity = 0.996
5'(1.000;0.996;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR003530 : Long hematopoietin receptor, soluble alpha chain, conserved site
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR015321 : Interleukin-6 receptor alpha, binding
GO :
0004896 : Molecular Function : cytokine receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, extr_plas 13.5, plas 6, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028742)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK082270
Equus
sp. (Horse) : ENSECAT00000025853
Monodelphis
sp. (Opossum) : ENSMODT00000035566
Pongo
sp. (Orangutan) : ENSPPYT00000000941
Rattus
sp. (Rat) : M58587
Bos
sp. (Cow) : NM_001110785
Macaca
sp. (Macaque) : XM_001114404
Pan
sp. (Chimpanzee) : XM_524889
Canis
sp. (Dog) : XM_850012
HIX0028742
HIT000657329 (
NM_001206866
)
(Interleukin-6 receptor subunit alpha isoform 3 precursor.)
genome : 154,377,669 - 154,410,561 (32,893)
query : 1 - 2,037 (2,037/2,058)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028742)
HIX0028742
HIT000136716 (
ENST00000344086
)
(Interleukin-6 receptor subunit alpha; IL-6 receptor subunit alpha; IL-6R subunit alpha; IL-6R-alpha; IL-6RA; IL-6R 1; Membrane glycoprotein 80; gp80; AltName: CD_antigen=CD126; Precursor;)
genome : 154,377,699 - 154,439,353 (61,655)
query : 1 - 3,217 (3,217/3,217)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24.5, extr_plas 13.5, cyto 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028742)
HIX0028742
HIT000266253
(
BC089410
)
(Interleukin-6 receptor subunit alpha; IL-6 receptor subunit alpha; IL-6R subunit alpha; IL-6R-alpha; IL-6RA; IL-6R 1; Membrane glycoprotein 80; gp80; AltName: CD_antigen=CD126; Precursor;)
genome : 154,377,699 - 154,439,328 (61,630)
query : 1 - 3,192 (3,192/3,217)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003530 : Long hematopoietin receptor, soluble alpha chain, conserved site
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR015321 : Interleukin-6 receptor alpha, binding
GO :
0004896 : Molecular Function : cytokine receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24.5, extr_plas 13.5, cyto 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028742)
HIX0028742
HIT000331362
(
AK223582
)
(Interleukin-6 receptor subunit alpha; IL-6 receptor subunit alpha; IL-6R subunit alpha; IL-6R-alpha; IL-6RA; IL-6R 1; Membrane glycoprotein 80; gp80; AltName: CD_antigen=CD126; Precursor;)
genome : 154,377,848 - 154,438,032 (60,185)
query : 1 - 1,841 (1,841/1,841)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR003530 : Long hematopoietin receptor, soluble alpha chain, conserved site
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR015321 : Interleukin-6 receptor alpha, binding
GO :
0004896 : Molecular Function : cytokine receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, extr_plas 13.5, plas 6, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028742)
HIX0028742
HIT000390739
(
BC132684
)
(Interleukin-6 receptor subunit alpha; IL-6 receptor subunit alpha; IL-6R subunit alpha; IL-6R-alpha; IL-6RA; IL-6R 1; Membrane glycoprotein 80; gp80; AltName: CD_antigen=CD126; Precursor;)
genome : 154,377,856 - 154,437,917 (60,062)
query : 1 - 1,718 (1,718/1,718)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003530 : Long hematopoietin receptor, soluble alpha chain, conserved site
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR015321 : Interleukin-6 receptor alpha, binding
GO :
0004896 : Molecular Function : cytokine receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, extr_plas 13.5, plas 6, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028742)
HIX0028742
HIT000390741
(
BC132686
)
(Interleukin-6 receptor subunit alpha; IL-6 receptor subunit alpha; IL-6R subunit alpha; IL-6R-alpha; IL-6RA; IL-6R 1; Membrane glycoprotein 80; gp80; AltName: CD_antigen=CD126; Precursor;)
genome : 154,377,856 - 154,437,917 (60,062)
query : 1 - 1,718 (1,718/1,718)
10 exons
identity = 0.999
5'(1.000;0.996;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR003530 : Long hematopoietin receptor, soluble alpha chain, conserved site
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR015321 : Interleukin-6 receptor alpha, binding
GO :
0004896 : Molecular Function : cytokine receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, extr_plas 13.5, plas 6, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028742)
HIX0028742
HIT000322210
(
X58298
)
(Interleukin-6 receptor subunit alpha; IL-6 receptor subunit alpha; IL-6R subunit alpha; IL-6R-alpha; IL-6RA; IL-6R 1; Membrane glycoprotein 80; gp80; AltName: CD_antigen=CD126; Precursor;)
genome : 154,378,055 - 154,437,884 (59,830)
query : 1 - 1,486 (1,486/1,486)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003530 : Long hematopoietin receptor, soluble alpha chain, conserved site
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR015321 : Interleukin-6 receptor alpha, binding
GO :
0004896 : Molecular Function : cytokine receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, extr_plas 13.5, plas 6, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028742)
HIX0028742
HIT000425810
(
AK293013
)
(Interleukin-6 receptor subunit alpha isoform 2 precursor.)
genome : 154,378,055 - 154,437,736 (59,682)
query : 1 - 1,244 (1,244/1,244)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992)3'
coverage = 1.000
InterPro :
IPR003530 : Long hematopoietin receptor, soluble alpha chain, conserved site
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR015321 : Interleukin-6 receptor alpha, binding
GO :
0004896 : Molecular Function : cytokine receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24.5, extr_plas 13.5, cyto 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028742)
HIX0028742
HIT000431596
(
AK312730
)
(Interleukin-6 receptor subunit alpha; IL-6 receptor subunit alpha; IL-6R subunit alpha; IL-6R-alpha; IL-6RA; IL-6R 1; Membrane glycoprotein 80; gp80; AltName: CD_antigen=CD126; Precursor;)
genome : 154,378,058 - 154,437,856 (59,799)
query : 1 - 1,455 (1,455/1,455)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.989;1.000)3'
coverage = 1.000
InterPro :
IPR003530 : Long hematopoietin receptor, soluble alpha chain, conserved site
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR015321 : Interleukin-6 receptor alpha, binding
GO :
0004896 : Molecular Function : cytokine receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, extr_plas 13.5, plas 6, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028742)
HIX0028742
HIT000612123 (
ENST00000512471
)
(Interleukin-6 receptor subunit alpha; IL-6 receptor subunit alpha; IL-6R subunit alpha; IL-6R-alpha; IL-6RA; IL-6R 1; Membrane glycoprotein 80; gp80; AltName: CD_antigen=CD126; Precursor;)
genome : 154,378,091 - 154,407,059 (28,969)
query : 1 - 527 (527/527)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028742)
HIX0028742
HIT000093827
(
BC035327
)
(Interleukin-6 receptor subunit alpha isoform 3 precursor.)
genome : 154,378,094 - 154,410,561 (32,468)
query : 1 - 1,611 (1,611/1,648)
7 exons
identity = 0.998
5'(1.000;0.996;0.992;0.995;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR003530 : Long hematopoietin receptor, soluble alpha chain, conserved site
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR015321 : Interleukin-6 receptor alpha, binding
GO :
0004896 : Molecular Function : cytokine receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028742)
HIX0178327
HIT000534209 (
ENST00000436275
)
(SAC3/GANP/Nin1/mts3/eIF-3 p25 family protein.)
genome : 154,386,845 - 154,387,613 (769)
query : 1 - 769 (769/769)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 12.5, extr 8, nucl 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178327)
HIX0028742
HIT000580221 (
ENST00000476006
)
(Interleukin-6 receptor subunit alpha; IL-6 receptor subunit alpha; IL-6R subunit alpha; IL-6R-alpha; IL-6RA; IL-6R 1; Membrane glycoprotein 80; gp80; AltName: CD_antigen=CD126; Precursor;)
genome : 154,401,819 - 154,422,455 (20,637)
query : 1 - 881 (881/881)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11.5, cyto_mito 10.5, cyto_nucl 10, nucl 8,
cyto 7.5, cyto_pero 5.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028742)
HIX0028742
HIT000614637 (
ENST00000515190
)
(Interleukin-6 receptor subunit alpha; IL-6 receptor subunit alpha; IL-6R subunit alpha; IL-6R-alpha; IL-6RA; IL-6R 1; Membrane glycoprotein 80; gp80; AltName: CD_antigen=CD126; Precursor;)
genome : 154,407,129 - 154,427,059 (19,931)
query : 1 - 570 (570/570)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 13.5, extr_plas 12, extr 9.5, mito 3.5,
E.R._mito 3, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028742)
HIX0028742
HIT000607257 (
ENST00000507256
)
(Interleukin-6 receptor subunit alpha; IL-6 receptor subunit alpha; IL-6R subunit alpha; IL-6R-alpha; IL-6RA; IL-6R 1; Membrane glycoprotein 80; gp80; AltName: CD_antigen=CD126; Precursor;)
genome : 154,407,486 - 154,437,790 (30,305)
query : 1 - 539 (539/539)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 9, plas 6.5, mito_pero 6.5, cyto 5,
extr_plas 4.5, cyto_mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028742)
HIX0028742
HIT000216446
(
S72848
)
(Interleukin-6 receptor subunit alpha; IL-6 receptor subunit alpha; IL-6R subunit alpha; IL-6R-alpha; IL-6RA; IL-6R 1; Membrane glycoprotein 80; gp80; AltName: CD_antigen=CD126; Precursor;)
genome : 154,420,598 - 154,437,641 (17,044)
query : 11 - 162 (152/162)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.938
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 14, extr 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028742)
HIX0028742
HIT000603013 (
ENST00000502679
)
(Interleukin-6 receptor subunit alpha; IL-6 receptor subunit alpha; IL-6R subunit alpha; IL-6R-alpha; IL-6RA; IL-6R 1; Membrane glycoprotein 80; gp80; AltName: CD_antigen=CD126; Precursor;)
genome : 154,426,585 - 154,437,724 (11,140)
query : 1 - 588 (588/588)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, mito 3, pero 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028742)
HIX0018636
HIT000590510 (
ENST00000486773
)
(Conserved hypothetical protein.)
genome : 154,442,248 - 154,458,520 (16,273)
query : 1 - 693 (693/693)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 10, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018636)
HIX0018636
HIT000306940_03
(
CR936667
)
(SH2 domain-containing adapter protein E;)
genome : 154,451,963 - 154,473,964 (22,002)
query : 12 - 5,617 (5,606/5,635)
6 exons
identity = 0.994
3'(0.993;1.000;1.000;1.000;1.000;0.981)5'
coverage = 0.998
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 14.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018636)
HIX0018636
HIT000307009
(
CR936736
)
(SH2 domain-containing adapter protein D.)
genome : 154,451,963 - 154,461,642 (9,680)
query : 1 - 6,848 (6,848/6,866)
3 exons
identity = 0.997
3'(0.997;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 7, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018636)
HIX0018636
HIT000316703 (
NM_001010846
)
(SH2 domain-containing adapter protein E;)
genome : 154,451,954 - 154,474,526 (22,573)
query : 1 - 6,183 (6,183/6,186)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito_nucl 13.8333, cyto_nucl 12.3333,
mito 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018636)
HIX0018636
HIT000116839 (
ENST00000304760
)
(SH2 domain-containing adapter protein E;)
genome : 154,451,957 - 154,474,589 (22,633)
query : 1 - 6,243 (6,243/6,243)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito_nucl 13.8333, cyto_nucl 12.3333,
mito 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018636)
HIX0018636
HIT000668536 (
ENST00000555188
)
(SH2 domain-containing adapter protein D.)
genome : 154,451,957 - 154,461,642 (9,686)
query : 1 - 6,855 (6,855/6,855)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 7, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018636)
HIX0018636
HIT000014847
(
AK074067
)
(SH2 domain-containing adapter protein E.)
genome : 154,451,961 - 154,473,945 (21,985)
query : 1 - 5,595 (5,595/5,595)
6 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 12.5, mito 7, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018636)
HIX0018636
HIT000050275
(
AK131004
)
(Hypothetical short protein.)
genome : 154,451,961 - 154,452,510 (550)
query : 1 - 550 (550/550)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 11.5, mito 8, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018636)
HIX0018636
HIT000045879
(
AK126006
)
(SH2 domain-containing adapter protein E;)
genome : 154,454,507 - 154,461,835 (7,329)
query : 10 - 2,894 (2,885/2,894)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 14.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018636)
HIX0018636
HIT000387500
(
BC117210
)
Representative transcript
(SH2 domain-containing adapter protein E;)
genome : 154,456,596 - 154,474,526 (17,931)
query : 1 - 1,541 (1,541/1,541)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito_nucl 13.8333, cyto_nucl 12.3333,
mito 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018636)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC109362
Bos
sp. (Cow) : BC140673
Equus
sp. (Horse) : ENSECAT00000025491
Oryzias
sp. (Medaka) : ENSORLT00000012148
Pongo
sp. (Orangutan) : ENSPPYT00000000940
Rattus
sp. (Rat) : ENSRNOT00000028225
Tetraodon
sp. (Tetraodon) : GSTENT00032589001
Tetraodon
sp. (Tetraodon) : GSTENT00033965001
Takifugu
sp. (Fugu) : SINFRUT00000157445
Monodelphis
sp. (Opossum) : XM_001373050
Pan
sp. (Chimpanzee) : XM_524890
Danio
sp. (Zebrafish) : XM_684895
Canis
sp. (Dog) : XM_850008
Macaca
sp. (Macaque) : XR_014286
HIX0018636
HIT000502208
(
BC143765
)
(SH2 domain-containing adapter protein E;)
genome : 154,456,596 - 154,474,525 (17,930)
query : 1 - 1,540 (1,540/1,540)
6 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.992;0.997)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 6, cyto_nucl 5, nucl 4.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018636)
HIX0001105
HIT000318594 (
NM_182499
)
(Tudor domain-containing protein 10;)
genome : 154,474,695 - 154,520,623 (45,929)
query : 1 - 2,331 (2,331/2,346)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, nucl 12, cyto_mito 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001105)
HIX0001105
HIT000334019
(
BC044864
)
Representative transcript
(Tudor domain-containing protein 10;)
genome : 154,474,695 - 154,520,623 (45,929)
query : 1 - 2,330 (2,330/2,345)
13 exons
identity = 0.997
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
0.989;0.986;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR002999 : Tudor domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, nucl 11, cyto_mito 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001105)
Ortholog candidate ( ->
Evola
)
Equus
sp. (Horse) : ENSECAT00000024938
Pongo
sp. (Orangutan) : ENSPPYT00000000939
Macaca
sp. (Macaque) : XM_001111801
Pan
sp. (Chimpanzee) : XM_001141015
Monodelphis
sp. (Opossum) : XM_001373083
Bos
sp. (Cow) : XM_870113
HIX0001105
HIT000485196 (
NM_001098475
)
(Tudor domain-containing protein 10;)
genome : 154,474,695 - 154,520,623 (45,929)
query : 1 - 2,529 (2,529/2,544)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, nucl 13, cyto_mito 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001105)
HIX0001105
HIT000349762 (
ENST00000368482
)
(Tudor domain-containing protein 10;)
genome : 154,474,695 - 154,520,623 (45,929)
query : 1 - 2,331 (2,331/2,331)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, nucl 12, cyto_mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001105)
HIX0001105
HIT000349760 (
ENST00000368480
)
(Tudor domain-containing protein 10;)
genome : 154,475,448 - 154,520,623 (45,176)
query : 1 - 1,776 (1,776/1,776)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, nucl 13, cyto_mito 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001105)
HIX0001105
HIT000496768
(
AK302144
)
(Tudor domain-containing protein 10;)
genome : 154,475,448 - 154,520,274 (44,827)
query : 1 - 1,427 (1,427/1,427)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR002999 : Tudor domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, nucl 12, cyto_mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001105)
HIX0001105
HIT000026698
(
AL713777
)
(Tudor domain-containing protein 10;)
genome : 154,493,842 - 154,520,623 (26,782)
query : 1 - 1,324 (1,324/1,341)
8 exons
identity = 0.995
5'(0.991;1.000;1.000;0.993;0.993;0.987;1.000;
0.998)3'
coverage = 1.000
InterPro :
IPR002999 : Tudor domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 9.5, cyto_nucl 8.5, nucl 6.5,
E.R._mito 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001105)
HIX0001105
HIT000583980 (
ENST00000479937
)
(Tudor domain-containing protein 10;)
genome : 154,493,842 - 154,520,623 (26,782)
query : 1 - 1,327 (1,327/1,327)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 8.5, cyto_nucl 8.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001105)
HIX0001105
HIT000336316
(
BC100897
)
(Tudor domain-containing protein 10;)
genome : 154,493,871 - 154,520,005 (26,135)
query : 1 - 789 (789/789)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002999 : Tudor domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto_nucl 4.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001105)
HIX0001105
HIT000336317
(
BC100898
)
(Tudor domain-containing protein 10;)
genome : 154,493,871 - 154,520,005 (26,135)
query : 1 - 789 (789/789)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002999 : Tudor domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto_nucl 4.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001105)
HIX0001105
HIT000386322
(
BC100895
)
(Tudor domain-containing protein 10;)
genome : 154,493,871 - 154,520,005 (26,135)
query : 1 - 789 (789/789)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002999 : Tudor domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto_nucl 4.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001105)
HIX0001105
HIT000386323
(
BC100896
)
(Tudor domain-containing protein 10;)
genome : 154,493,871 - 154,520,005 (26,135)
query : 1 - 789 (789/789)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002999 : Tudor domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto_nucl 4.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001105)
HIX0029195
HIT000091199
(
BC026120
)
Representative transcript
(Conserved hypothetical protein.)
genome : 154,502,038 - 154,504,202 (2,165)
query : 1 - 2,162 (2,162/2,177)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, extr 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029195)
HIX0001105
HIT000573267 (
ENST00000468714
)
(Tudor domain-containing protein 10;)
genome : 154,507,017 - 154,519,955 (12,939)
query : 1 - 572 (572/572)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 7, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001105)
HIX0001105
HIT000567689 (
ENST00000462871
)
(Tudor domain-containing protein 10;)
genome : 154,514,387 - 154,517,309 (2,923)
query : 1 - 489 (489/489)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001105)
HIX0001105
HIT000252240
(
AY358195
)
(Tudor domain-containing protein 10;)
genome : 154,515,206 - 154,520,623 (5,418)
query : 19 - 1,298 (1,280/1,300)
5 exons
identity = 0.999
5'(1.000;0.993;1.000;1.000;1.000)3'
coverage = 0.985
InterPro :
IPR002999 : Tudor domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, nucl 9, cyto 8, extr 7, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001105)
HIX0001106
HIT000250707
(
AY112698
)
Representative transcript
(Ubiquitin-conjugating enzyme E2 Q1; EC=6.3.2.19; Protein NICE-5; Ubiquitin carrier protein Q1; Ubiquitin-protein ligase Q1;)
genome : 154,521,053 - 154,531,095 (10,043)
query : 1 - 3,195 (3,195/3,230)
13 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 6.3.2.19
InterPro :
IPR000608 : Ubiquitin-conjugating enzyme E2
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0016881 : Molecular Function : acid-amino acid ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB174372
Mus
sp. (Mouse) : AY112699
Canis
sp. (Dog) : ENSCAFT00000027200
Oryzias
sp. (Medaka) : ENSORLT00000016420
Pongo
sp. (Orangutan) : ENSPPYT00000000938
Rattus
sp. (Rat) : ENSRNOT00000028210
Tetraodon
sp. (Tetraodon) : GSTENT00022489001
Takifugu
sp. (Fugu) : SINFRUT00000127877
Pan
sp. (Chimpanzee) : XM_001152268
Monodelphis
sp. (Opossum) : XM_001373097
Equus
sp. (Horse) : XM_001915875
Bos
sp. (Cow) : XM_868595
HIX0001106
HIT000206478 (
NM_017582
)
(Ubiquitin-conjugating enzyme E2 Q1; EC=6.3.2.19; Protein NICE-5; Ubiquitin carrier protein Q1; Ubiquitin-protein ligase Q1;)
genome : 154,521,051 - 154,531,120 (10,070)
query : 1 - 3,223 (3,223/3,223)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 12.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000013002
(
AK056388
)
(Ubiquitin-conjugating enzyme E2 Q1; EC=6.3.2.19; Protein NICE-5; Ubiquitin carrier protein Q1; Ubiquitin-protein ligase Q1;)
genome : 154,521,051 - 154,525,627 (4,577)
query : 1 - 2,523 (2,523/2,523)
9 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
InterPro :
IPR000608 : Ubiquitin-conjugating enzyme E2
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0016881 : Molecular Function : acid-amino acid ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000113535 (
ENST00000292211
)
(Ubiquitin-conjugating enzyme E2 Q1; EC=6.3.2.19; Protein NICE-5; Ubiquitin carrier protein Q1; Ubiquitin-protein ligase Q1;)
genome : 154,521,053 - 154,531,109 (10,057)
query : 1 - 3,210 (3,210/3,210)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000488610
(
AK293986
)
(Ubiquitin-conjugating enzyme E2 Q1; EC=6.3.2.19; Protein NICE-5; Ubiquitin carrier protein Q1; Ubiquitin-protein ligase Q1;)
genome : 154,522,420 - 154,530,735 (8,316)
query : 9 - 1,477 (1,469/1,477)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
EC number :
EC 6.3.2.19
InterPro :
IPR000608 : Ubiquitin-conjugating enzyme E2
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0016881 : Molecular Function : acid-amino acid ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14, nucl 5, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000034256
(
BC009286
)
(Ubiquitin-conjugating enzyme E2 Q1; EC=6.3.2.19; Protein NICE-5; Ubiquitin carrier protein Q1; Ubiquitin-protein ligase Q1;)
genome : 154,522,460 - 154,525,254 (2,795)
query : 1 - 952 (952/983)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
InterPro :
IPR000608 : Ubiquitin-conjugating enzyme E2
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0016881 : Molecular Function : acid-amino acid ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19, cyto 14.5, nucl 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000264116
(
BC070158
)
(Ubiquitin-conjugating enzyme E2 Q1; EC=6.3.2.19; Protein NICE-5; Ubiquitin carrier protein Q1; Ubiquitin-protein ligase Q1;)
genome : 154,522,463 - 154,528,383 (5,921)
query : 1 - 1,336 (1,336/1,368)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 6.3.2.19
InterPro :
IPR000608 : Ubiquitin-conjugating enzyme E2
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0016881 : Molecular Function : acid-amino acid ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 14, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000070056
(
AF116721
)
(Ubiquitin-conjugating enzyme E2 Q1; EC=6.3.2.19; Protein NICE-5; Ubiquitin carrier protein Q1; Ubiquitin-protein ligase Q1;)
genome : 154,522,460 - 154,524,601 (2,142)
query : 1 - 791 (791/808)
6 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
InterPro :
IPR000608 : Ubiquitin-conjugating enzyme E2
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0016881 : Molecular Function : acid-amino acid ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 7, cyto_pero 7, cyto_plas 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000037072
(
BC015316
)
(Ubiquitin-conjugating enzyme E2 Q1; EC=6.3.2.19; Protein NICE-5; Ubiquitin carrier protein Q1; Ubiquitin-protein ligase Q1;)
genome : 154,522,460 - 154,524,455 (1,996)
query : 1 - 757 (757/772)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
InterPro :
IPR000608 : Ubiquitin-conjugating enzyme E2
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0016881 : Molecular Function : acid-amino acid ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 5, extr 4, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000266158
(
BC087836
)
(Ubiquitin-conjugating enzyme E2 Q1; EC=6.3.2.19; Protein NICE-5; Ubiquitin carrier protein Q1; Ubiquitin-protein ligase Q1;)
genome : 154,522,460 - 154,527,931 (5,472)
query : 12 - 1,225 (1,214/1,239)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.991
EC number :
EC 6.3.2.19
InterPro :
IPR000608 : Ubiquitin-conjugating enzyme E2
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0016881 : Molecular Function : acid-amino acid ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27.5, cyto_nucl 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000085901
(
BC000848
)
(Ubiquitin-conjugating enzyme E2 Q1; EC=6.3.2.19; Protein NICE-5; Ubiquitin carrier protein Q1; Ubiquitin-protein ligase Q1;)
genome : 154,522,460 - 154,525,650 (3,191)
query : 12 - 1,148 (1,137/1,162)
9 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.990
EC number :
EC 6.3.2.19
InterPro :
IPR000608 : Ubiquitin-conjugating enzyme E2
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0016881 : Molecular Function : acid-amino acid ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000260205
(
BC061583
)
(Ubiquitin-conjugating enzyme E2 Q1; EC=6.3.2.19; Protein NICE-5; Ubiquitin carrier protein Q1; Ubiquitin-protein ligase Q1;)
genome : 154,522,460 - 154,525,627 (3,168)
query : 13 - 1,126 (1,114/1,140)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.989
EC number :
EC 6.3.2.19
InterPro :
IPR000608 : Ubiquitin-conjugating enzyme E2
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0016881 : Molecular Function : acid-amino acid ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 18, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000245542
(
AJ243666
)
(Ubiquitin-conjugating enzyme E2 Q1; EC=6.3.2.19; Protein NICE-5; Ubiquitin carrier protein Q1; Ubiquitin-protein ligase Q1;)
genome : 154,522,459 - 154,524,911 (2,453)
query : 2 - 882 (881/885)
7 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.938)5'
coverage = 0.995
EC number :
EC 6.3.2.19
InterPro :
IPR000608 : Ubiquitin-conjugating enzyme E2
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0016881 : Molecular Function : acid-amino acid ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 18, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000435621
(
BC148185
)
(Ubiquitin-conjugating enzyme E2 Q1; EC=6.3.2.19; Protein NICE-5; Ubiquitin carrier protein Q1; Ubiquitin-protein ligase Q1;)
genome : 154,522,675 - 154,530,790 (8,116)
query : 8 - 1,276 (1,269/1,276)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.989)5'
coverage = 0.995
EC number :
EC 6.3.2.19
InterPro :
IPR000608 : Ubiquitin-conjugating enzyme E2
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0016881 : Molecular Function : acid-amino acid ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14.5, mito 5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000338621
(
BC107057
)
(Ubiquitin-conjugating enzyme E2 Q2 isoform 1.)
genome : 154,522,675 - 154,530,774 (8,100)
query : 16 - 1,267 (1,252/1,267)
13 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.917)5'
coverage = 0.988
EC number :
EC 6.3.2.19
InterPro :
IPR000608 : Ubiquitin-conjugating enzyme E2
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0016881 : Molecular Function : acid-amino acid ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11, mito 5, pero 5, mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000333223
(
AY948200
)
(Ubiquitin-conjugating enzyme E2 Q1; EC=6.3.2.19; Protein NICE-5; Ubiquitin carrier protein Q1; Ubiquitin-protein ligase Q1;)
genome : 154,522,822 - 154,531,103 (8,282)
query : 1 - 1,435 (1,435/1,435)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.998)5'
coverage = 1.000
EC number :
EC 6.3.2.19
InterPro :
IPR000608 : Ubiquitin-conjugating enzyme E2
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0016881 : Molecular Function : acid-amino acid ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000572285 (
ENST00000467683
)
(Ubiquitin-conjugating enzyme E2 Q1; EC=6.3.2.19; Protein NICE-5; Ubiquitin carrier protein Q1; Ubiquitin-protein ligase Q1;)
genome : 154,522,885 - 154,525,296 (2,412)
query : 1 - 370 (370/370)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto 9.5, extr 9, cyto_nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000268069
(
CR457219
)
(Ubiquitin-conjugating enzyme E2 Q1; EC=6.3.2.19; Protein NICE-5; Ubiquitin carrier protein Q1; Ubiquitin-protein ligase Q1;)
genome : 154,522,914 - 154,523,983 (1,070)
query : 7 - 216 (210/216)
3 exons
identity = 0.971
3'(0.969;1.000;0.955)5'
coverage = 0.972
EC number :
EC 6.3.2.19
InterPro :
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 11.5, nucl 10.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000595092 (
ENST00000491572
)
(Ubiquitin-conjugating enzyme E2 Q1; EC=6.3.2.19; Protein NICE-5; Ubiquitin carrier protein Q1; Ubiquitin-protein ligase Q1;)
genome : 154,523,429 - 154,524,333 (905)
query : 1 - 235 (235/235)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000580800 (
ENST00000476612
)
(Conserved hypothetical protein.)
genome : 154,523,699 - 154,524,277 (579)
query : 1 - 301 (301/301)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 10, nucl 8.5, extr_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000587518 (
ENST00000483639
)
(Ubiquitin-conjugating enzyme E2 Q1; EC=6.3.2.19; Protein NICE-5; Ubiquitin carrier protein Q1; Ubiquitin-protein ligase Q1;)
genome : 154,523,936 - 154,525,552 (1,617)
query : 1 - 694 (694/694)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12.3333, nucl 8,
cyto_plas 7.33333, mito_nucl 7.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000578478 (
ENST00000474181
)
(Non-protein coding transcript.)
genome : 154,524,227 - 154,524,851 (625)
query : 1 - 524 (524/524)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0001106
HIT000600728 (
ENST00000497453
)
(Ubiquitin-conjugating enzyme E2 Q1; EC=6.3.2.19; Protein NICE-5; Ubiquitin carrier protein Q1; Ubiquitin-protein ligase Q1;)
genome : 154,524,858 - 154,531,504 (6,647)
query : 1 - 830 (830/830)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12.5, mito 5, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001106)
HIX0161103
HIT000539547 (
ENST00000441613
)
(Hypothetical short protein.)
genome : 154,526,085 - 154,527,493 (1,409)
query : 1 - 432 (432/432)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 3, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161103)
HIX0029192
HIT000091038
(
BC025328
)
Representative transcript
(Conserved hypothetical protein.)
genome : 154,537,284 - 154,538,524 (1,241)
query : 1 - 1,241 (1,241/1,263)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, mito 5, nucl 2.5,
E.R._mito 2.5, mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029192)
HIX0029192
HIT000563950
(
AB593149
)
(Conserved hypothetical protein.)
genome : 154,538,486 - 154,540,192 (1,707)
query : 1 - 340 (340/340)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029192)
HIX0028798
HIT000349756 (
ENST00000368476
)
(Neuronal acetylcholine receptor subunit beta-2; Precursor;)
genome : 154,540,257 - 154,552,502 (12,246)
query : 1 - 5,867 (5,867/5,867)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028798)
HIX0028798
HIT000197764 (
NM_000748
)
(Neuronal acetylcholine receptor subunit beta-2; Precursor;)
genome : 154,540,257 - 154,552,352 (12,096)
query : 1 - 5,717 (5,717/5,731)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028798)
HIX0028798
HIT000220721
(
U62437
)
Representative transcript
(Neuronal acetylcholine receptor subunit beta-2; Precursor;)
genome : 154,540,257 - 154,549,083 (8,827)
query : 1 - 2,448 (2,448/2,448)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR002394 : Nicotinic acetylcholine receptor
IPR006029 : Neurotransmitter-gated ion-channel transmembrane domain
IPR006201 : Neurotransmitter-gated ion-channel
IPR006202 : Neurotransmitter-gated ion-channel ligand-binding domain
IPR018000 : Neurotransmitter-gated ion-channel, conserved site
IPR027361 : Nicotinic acetylcholine-gated receptor, transmembrane domain
GO :
0004889 : Molecular Function : acetylcholine-activated cation-selective channel activity
0005216 : Molecular Function : ion channel activity
0005230 : Molecular Function : extracellular ligand-gated ion channel activity
0006810 : Biological Process : transport
0006811 : Biological Process : ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0045211 : Cellular Component : postsynaptic membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028798)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK081254
Takifugu
sp. (Fugu) : AY297428
Canis
sp. (Dog) : ENSCAFT00000027196
Danio
sp. (Zebrafish) : ENSDART00000041625
Oryzias
sp. (Medaka) : ENSORLT00000012169
Pongo
sp. (Orangutan) : ENSPPYT00000000937
Tetraodon
sp. (Tetraodon) : GSTENT00033964001
Gallus
sp. (Chicken) : J05643
Rattus
sp. (Rat) : L31622
Macaca
sp. (Macaque) : XM_001114439
Pan
sp. (Chimpanzee) : XM_001152392
Monodelphis
sp. (Opossum) : XM_001373116
Bos
sp. (Cow) : XM_595691
HIX0028798
HIT000321820
(
X53179
)
(Neuronal acetylcholine receptor subunit beta-2; Precursor;)
genome : 154,540,355 - 154,548,504 (8,150)
query : 1 - 1,771 (1,771/1,771)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR002394 : Nicotinic acetylcholine receptor
IPR006029 : Neurotransmitter-gated ion-channel transmembrane domain
IPR006201 : Neurotransmitter-gated ion-channel
IPR006202 : Neurotransmitter-gated ion-channel ligand-binding domain
IPR018000 : Neurotransmitter-gated ion-channel, conserved site
IPR027361 : Nicotinic acetylcholine-gated receptor, transmembrane domain
GO :
0004889 : Molecular Function : acetylcholine-activated cation-selective channel activity
0005216 : Molecular Function : ion channel activity
0005230 : Molecular Function : extracellular ligand-gated ion channel activity
0006810 : Biological Process : transport
0006811 : Biological Process : ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0045211 : Cellular Component : postsynaptic membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028798)
HIX0028798
HIT000432336
(
AK313470
)
(Neuronal acetylcholine receptor subunit beta-2; Precursor;)
genome : 154,540,488 - 154,548,408 (7,921)
query : 1 - 1,542 (1,542/1,542)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002394 : Nicotinic acetylcholine receptor
IPR006029 : Neurotransmitter-gated ion-channel transmembrane domain
IPR006201 : Neurotransmitter-gated ion-channel
IPR006202 : Neurotransmitter-gated ion-channel ligand-binding domain
IPR018000 : Neurotransmitter-gated ion-channel, conserved site
IPR027361 : Nicotinic acetylcholine-gated receptor, transmembrane domain
GO :
0004889 : Molecular Function : acetylcholine-activated cation-selective channel activity
0005216 : Molecular Function : ion channel activity
0005230 : Molecular Function : extracellular ligand-gated ion channel activity
0006810 : Biological Process : transport
0006811 : Biological Process : ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0045211 : Cellular Component : postsynaptic membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028798)
HIX0028798
HIT000265547
(
BC075040
)
(Neuronal acetylcholine receptor subunit beta-2; Precursor;)
genome : 154,540,492 - 154,548,440 (7,949)
query : 1 - 1,570 (1,570/1,570)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002394 : Nicotinic acetylcholine receptor
IPR006029 : Neurotransmitter-gated ion-channel transmembrane domain
IPR006201 : Neurotransmitter-gated ion-channel
IPR006202 : Neurotransmitter-gated ion-channel ligand-binding domain
IPR018000 : Neurotransmitter-gated ion-channel, conserved site
IPR027361 : Nicotinic acetylcholine-gated receptor, transmembrane domain
GO :
0004889 : Molecular Function : acetylcholine-activated cation-selective channel activity
0005216 : Molecular Function : ion channel activity
0005230 : Molecular Function : extracellular ligand-gated ion channel activity
0006810 : Biological Process : transport
0006811 : Biological Process : ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0045211 : Cellular Component : postsynaptic membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028798)
HIX0028798
HIT000265548
(
BC075041
)
(Neuronal acetylcholine receptor subunit beta-2; Precursor;)
genome : 154,540,492 - 154,548,440 (7,949)
query : 1 - 1,570 (1,570/1,570)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002394 : Nicotinic acetylcholine receptor
IPR006029 : Neurotransmitter-gated ion-channel transmembrane domain
IPR006201 : Neurotransmitter-gated ion-channel
IPR006202 : Neurotransmitter-gated ion-channel ligand-binding domain
IPR018000 : Neurotransmitter-gated ion-channel, conserved site
IPR027361 : Nicotinic acetylcholine-gated receptor, transmembrane domain
GO :
0004889 : Molecular Function : acetylcholine-activated cation-selective channel activity
0005216 : Molecular Function : ion channel activity
0005230 : Molecular Function : extracellular ligand-gated ion channel activity
0006810 : Biological Process : transport
0006811 : Biological Process : ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0045211 : Cellular Component : postsynaptic membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028798)
HIX0028798
HIT000325446
(
Y08415
)
(Neuronal acetylcholine receptor subunit beta-2; Precursor;)
genome : 154,540,521 - 154,548,408 (7,888)
query : 1 - 1,509 (1,509/1,509)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002394 : Nicotinic acetylcholine receptor
IPR006029 : Neurotransmitter-gated ion-channel transmembrane domain
IPR006201 : Neurotransmitter-gated ion-channel
IPR006202 : Neurotransmitter-gated ion-channel ligand-binding domain
IPR018000 : Neurotransmitter-gated ion-channel, conserved site
IPR027361 : Nicotinic acetylcholine-gated receptor, transmembrane domain
GO :
0004889 : Molecular Function : acetylcholine-activated cation-selective channel activity
0005216 : Molecular Function : ion channel activity
0005230 : Molecular Function : extracellular ligand-gated ion channel activity
0006810 : Biological Process : transport
0006811 : Biological Process : ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0045211 : Cellular Component : postsynaptic membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028798)
HIX0160500
HIT000519800 (
ENST00000421866
)
(Non-protein coding transcript.)
genome : 154,551,541 - 154,552,139 (599)
query : 1 - 321 (321/321)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160500)
HIX0001101
HIT000365790 (
NM_001025107
)
(Double-stranded RNA-specific adenosine deaminase isoform d.)
genome : 154,554,535 - 154,600,456 (45,922)
query : 1 - 6,539 (6,539/6,561)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.999;
0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.5, cyto 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000198115 (
NM_001111
)
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,554,535 - 154,580,724 (26,190)
query : 1 - 6,670 (6,670/6,692)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.999;
1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000205651 (
NM_015840
)
(Double-stranded RNA-specific adenosine deaminase isoform b.)
genome : 154,554,535 - 154,580,724 (26,190)
query : 1 - 6,592 (6,592/6,614)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.999;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000205652 (
NM_015841
)
(Double-stranded RNA-specific adenosine deaminase isoform c.)
genome : 154,554,535 - 154,580,724 (26,190)
query : 1 - 6,535 (6,535/6,557)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.999;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000655868 (
NM_001193495
)
(Double-stranded RNA-specific adenosine deaminase isoform d.)
genome : 154,554,535 - 154,578,776 (24,242)
query : 1 - 6,708 (6,708/6,730)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.999;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.5, cyto 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000055290
(
BX640741
)
(Double-stranded RNA-specific adenosine deaminase isoform d.)
genome : 154,554,544 - 154,600,437 (45,894)
query : 2 - 6,517 (6,516/6,544)
15 exons
identity = 0.997
3'(0.995;1.000;0.991;1.000;1.000;1.000;0.989;
0.994;1.000;1.000;1.000;1.000;1.000;0.997;
0.991)5'
coverage = 1.000
InterPro :
IPR000607 : Double-stranded RNA-specific adenosine deaminase (DRADA)
IPR002466 : Adenosine deaminase/editase
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR014720 : Double-stranded RNA-binding domain
GO :
0003723 : Molecular Function : RNA binding
0003726 : Molecular Function : double-stranded RNA adenosine deaminase activity
0004000 : Molecular Function : adenosine deaminase activity
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 18.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000052003
(
BC038227
)
Representative transcript
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,554,544 - 154,580,643 (26,100)
query : 9 - 6,595 (6,587/6,618)
15 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;1.000;1.000;0.989;
1.000;1.000;1.000;1.000;1.000;1.000;0.999;
0.994)5'
coverage = 0.999
EC number :
EC 3.5.4.-
InterPro :
IPR000607 : Double-stranded RNA-specific adenosine deaminase (DRADA)
IPR002466 : Adenosine deaminase/editase
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR014720 : Double-stranded RNA-binding domain
GO :
0003723 : Molecular Function : RNA binding
0003726 : Molecular Function : double-stranded RNA adenosine deaminase activity
0004000 : Molecular Function : adenosine deaminase activity
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB172025
Mus
sp. (Mouse) : AK147614
Gallus
sp. (Chicken) : AM179858
Danio
sp. (Zebrafish) : BC044344
Equus
sp. (Horse) : ENSECAT00000002639
Monodelphis
sp. (Opossum) : ENSMODT00000021787
Oryzias
sp. (Medaka) : ENSORLT00000012490
Pongo
sp. (Orangutan) : ENSPPYT00000000936
Tetraodon
sp. (Tetraodon) : GSTENT00033938001
Takifugu
sp. (Fugu) : SINFRUT00000162057
Rattus
sp. (Rat) : U18942
Pan
sp. (Chimpanzee) : XM_513841
Canis
sp. (Dog) : XM_547564
Bos
sp. (Cow) : XM_581374
HIX0001101
HIT000055014
(
BX538232
)
(Double-stranded RNA-specific adenosine deaminase isoform b.)
genome : 154,554,544 - 154,600,440 (45,897)
query : 1 - 6,521 (6,521/6,537)
15 exons
identity = 0.997
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993;0.995;0.999;
1.000)5'
coverage = 1.000
InterPro :
IPR000607 : Double-stranded RNA-specific adenosine deaminase (DRADA)
IPR002466 : Adenosine deaminase/editase
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR014720 : Double-stranded RNA-binding domain
GO :
0003723 : Molecular Function : RNA binding
0003726 : Molecular Function : double-stranded RNA adenosine deaminase activity
0004000 : Molecular Function : adenosine deaminase activity
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000113533 (
ENST00000292205
)
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,554,538 - 154,600,474 (45,937)
query : 1 - 6,554 (6,554/6,554)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.6667, cyto 11.5,
cyto_golg 7.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000323749
(
X79449
)
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,554,543 - 154,580,682 (26,140)
query : 3 - 6,626 (6,624/6,630)
15 exons
identity = 0.995
3'(0.992;0.992;1.000;1.000;1.000;1.000;0.989;
1.000;1.000;1.000;1.000;1.000;1.000;0.997;
0.995)5'
coverage = 0.999
EC number :
EC 3.5.4.-
InterPro :
IPR000607 : Double-stranded RNA-specific adenosine deaminase (DRADA)
IPR002466 : Adenosine deaminase/editase
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR014720 : Double-stranded RNA-binding domain
GO :
0003723 : Molecular Function : RNA binding
0003726 : Molecular Function : double-stranded RNA adenosine deaminase activity
0004000 : Molecular Function : adenosine deaminase activity
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000323748
(
X79448
)
(Double-stranded RNA-specific adenosine deaminase isoform d.)
genome : 154,554,543 - 154,578,776 (24,234)
query : 1 - 6,704 (6,704/6,708)
15 exons
identity = 0.995
3'(0.992;0.992;1.000;1.000;1.000;1.000;0.989;
1.000;1.000;1.000;1.000;1.000;1.000;0.997;
0.997)5'
coverage = 0.999
InterPro :
IPR000607 : Double-stranded RNA-specific adenosine deaminase (DRADA)
IPR002466 : Adenosine deaminase/editase
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR014720 : Double-stranded RNA-binding domain
GO :
0003723 : Molecular Function : RNA binding
0003726 : Molecular Function : double-stranded RNA adenosine deaminase activity
0004000 : Molecular Function : adenosine deaminase activity
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000349751 (
ENST00000368471
)
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,554,543 - 154,600,440 (45,898)
query : 1 - 6,515 (6,515/6,515)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000349754 (
ENST00000368474
)
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,554,543 - 154,580,682 (26,140)
query : 1 - 6,620 (6,620/6,620)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000217998
(
U10439
)
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,554,545 - 154,580,636 (26,092)
query : 1 - 6,572 (6,572/6,572)
15 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.999;
0.988)5'
coverage = 1.000
EC number :
EC 3.5.4.-
InterPro :
IPR000607 : Double-stranded RNA-specific adenosine deaminase (DRADA)
IPR002466 : Adenosine deaminase/editase
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR014720 : Double-stranded RNA-binding domain
GO :
0003723 : Molecular Function : RNA binding
0003726 : Molecular Function : double-stranded RNA adenosine deaminase activity
0004000 : Molecular Function : adenosine deaminase activity
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000218436
(
U18121
)
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,554,545 - 154,580,529 (25,985)
query : 1 - 6,474 (6,474/6,474)
15 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.998;
1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.-
InterPro :
IPR000607 : Double-stranded RNA-specific adenosine deaminase (DRADA)
IPR002466 : Adenosine deaminase/editase
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR014720 : Double-stranded RNA-binding domain
GO :
0003723 : Molecular Function : RNA binding
0003726 : Molecular Function : double-stranded RNA adenosine deaminase activity
0004000 : Molecular Function : adenosine deaminase activity
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000325089
(
X98559
)
(Double-stranded RNA-specific adenosine deaminase isoform c.)
genome : 154,554,545 - 154,575,102 (20,558)
query : 1 - 6,407 (6,407/6,407)
14 exons
identity = 0.995
3'(0.991;0.992;1.000;1.000;1.000;1.000;0.989;
1.000;1.000;1.000;1.000;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR000607 : Double-stranded RNA-specific adenosine deaminase (DRADA)
IPR002466 : Adenosine deaminase/editase
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR014720 : Double-stranded RNA-binding domain
GO :
0003723 : Molecular Function : RNA binding
0003726 : Molecular Function : double-stranded RNA adenosine deaminase activity
0004000 : Molecular Function : adenosine deaminase activity
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 18, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000498777
(
AK304153
)
(Double-stranded RNA-specific adenosine deaminase isoform a.)
genome : 154,554,736 - 154,580,678 (25,943)
query : 1 - 3,245 (3,245/3,245)
11 exons
identity = 0.997
3'(1.000;0.931;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997;1.000)5'
coverage = 1.000
InterPro :
IPR000607 : Double-stranded RNA-specific adenosine deaminase (DRADA)
IPR002466 : Adenosine deaminase/editase
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR014720 : Double-stranded RNA-binding domain
GO :
0003723 : Molecular Function : RNA binding
0003726 : Molecular Function : double-stranded RNA adenosine deaminase activity
0004000 : Molecular Function : adenosine deaminase activity
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000329826
(
AB209891
)
(Double-stranded RNA-specific adenosine deaminase isoform b.)
genome : 154,554,768 - 154,600,400 (45,633)
query : 1 - 6,259 (6,259/6,259)
15 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993;0.995;0.999;
1.000)5'
coverage = 1.000
InterPro :
IPR000607 : Double-stranded RNA-specific adenosine deaminase (DRADA)
IPR002466 : Adenosine deaminase/editase
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR014720 : Double-stranded RNA-binding domain
GO :
0003723 : Molecular Function : RNA binding
0003726 : Molecular Function : double-stranded RNA adenosine deaminase activity
0004000 : Molecular Function : adenosine deaminase activity
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 16.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000596109 (
ENST00000492630
)
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,557,110 - 154,557,894 (785)
query : 1 - 612 (612/612)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 9, mito_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000628332 (
ENST00000529168
)
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,557,285 - 154,575,102 (17,818)
query : 1 - 3,585 (3,585/3,585)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 18, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000630091 (
ENST00000530954
)
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,558,123 - 154,560,756 (2,634)
query : 1 - 558 (558/558)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 10, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000633340 (
ENST00000534279
)
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,558,469 - 154,561,078 (2,610)
query : 1 - 849 (849/849)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 11, nucl 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000022096
(
AK097241
)
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,572,653 - 154,600,462 (27,810)
query : 1 - 2,347 (2,347/2,347)
3 exons
identity = 0.997
3'(0.999;0.980;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.-
InterPro :
IPR000607 : Double-stranded RNA-specific adenosine deaminase (DRADA)
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR014720 : Double-stranded RNA-binding domain
GO :
0003723 : Molecular Function : RNA binding
0003726 : Molecular Function : double-stranded RNA adenosine deaminase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12.5, nucl 2.5, extr 2, mito 2,
cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000568694 (
ENST00000463920
)
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,572,653 - 154,600,462 (27,810)
query : 1 - 2,347 (2,347/2,347)
3 exons
identity = 0.998
3'(1.000;0.984;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, nucl 2.5, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000089432
(
BC017853
)
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,574,040 - 154,574,692 (653)
query : 1 - 653 (653/682)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.998
EC number :
EC 3.5.4.-
InterPro :
IPR000607 : Double-stranded RNA-specific adenosine deaminase (DRADA)
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0003723 : Molecular Function : RNA binding
0003726 : Molecular Function : double-stranded RNA adenosine deaminase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 9, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000598251 (
ENST00000494866
)
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,574,554 - 154,600,388 (25,835)
query : 1 - 471 (471/471)
3 exons
identity = 0.992
3'(1.000;0.984;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000575516 (
ENST00000471068
)
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,574,572 - 154,600,475 (25,904)
query : 1 - 577 (577/577)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 12, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000626113 (
ENST00000526905
)
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,574,675 - 154,581,288 (6,614)
query : 1 - 490 (490/490)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 13.5, extr 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000395332
(
EF190448
)
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,574,680 - 154,575,106 (427)
query : 21 - 311 (291/311)
2 exons
identity = 0.986
3'(1.000;0.984)5'
coverage = 0.936
EC number :
EC 3.5.4.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14, cyto 7.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000395333
(
EF190449
)
(Double-stranded RNA-specific adenosine deaminase isoform c.)
genome : 154,574,680 - 154,575,106 (427)
query : 21 - 447 (427/447)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.955
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 8.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000395336
(
EF190452
)
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,574,680 - 154,575,102 (423)
query : 16 - 302 (287/302)
2 exons
identity = 0.986
3'(1.000;0.984)5'
coverage = 0.950
EC number :
EC 3.5.4.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 11, extr 6, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000395337
(
EF190453
)
(Double-stranded RNA-specific adenosine deaminase isoform c.)
genome : 154,574,680 - 154,575,102 (423)
query : 16 - 438 (423/438)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.966
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, extr 6, cyto 4, mito 4, cyto_mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000395334
(
EF190450
)
(Double-stranded RNA-specific adenosine deaminase isoform c.)
genome : 154,574,680 - 154,575,103 (424)
query : 3 - 426 (424/426)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 16, cyto 9.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000395335
(
EF190451
)
(Double-stranded RNA-specific adenosine deaminase; DRADA; EC=3.5.4.-; 136 kDa double-stranded RNA-binding protein; p136; Interferon-inducible protein 4; IFI-4; K88DSRBP;)
genome : 154,574,680 - 154,575,103 (424)
query : 3 - 290 (288/290)
2 exons
identity = 0.986
3'(1.000;0.984)5'
coverage = 0.993
EC number :
EC 3.5.4.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 7.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000325092
(
X98563
)
(Conserved hypothetical protein.)
genome : 154,578,459 - 154,579,158 (700)
query : 1 - 700 (700/700)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0029738
HIT000325091
(
X98562
)
Representative transcript
(Hypothetical short protein.)
genome : 154,597,539 - 154,597,629 (91)
query : 1 - 91 (91/91)
1 exon
identity = 0.989
3'(0.989)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029738)
HIX0001101
HIT000325090
(
X98561
)
(Non-protein coding transcript.)
genome : 154,600,331 - 154,600,384 (54)
query : 2 - 55 (54/55)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.982
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0001101
HIT000066630
(
AF084516
)
(Non-protein coding transcript.)
genome : 154,600,332 - 154,600,433 (102)
query : 1 - 102 (102/102)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001101)
HIX0023527
HIT000199164 (
NM_002249
)
(Small conductance calcium-activated potassium channel protein 3; SK3; SKCa 3; SKCa3; KCa2.3;)
genome : 154,669,943 - 154,842,754 (172,812)
query : 1 - 13,019 (13,019/13,035)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023527)
HIX0023527
HIT000656949 (
NM_001204087
)
(Small conductance calcium-activated potassium channel protein 3 isoform c.)
genome : 154,669,943 - 154,842,754 (172,812)
query : 1 - 13,064 (13,064/13,080)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023527)
HIX0023527
HIT000214584 (
NM_170782
)
(Small conductance calcium-activated potassium channel protein 3; SK3; SKCa 3; SKCa3; KCa2.3;)
genome : 154,669,943 - 154,832,338 (162,396)
query : 1 - 11,940 (11,940/11,956)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023527)
HIX0023527
HIT000092032
(
BC030100
)
(Hypothetical short protein.)
genome : 154,674,765 - 154,675,702 (938)
query : 5 - 938 (934/961)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10.5, cyto 9.5, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023527)
HIX0023527
HIT000615058 (
ENST00000515643
)
(Small conductance calcium-activated potassium channel protein 3; SK3; SKCa 3; SKCa3; KCa2.3;)
genome : 154,675,205 - 154,680,702 (5,498)
query : 1 - 532 (532/532)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, nucl 7.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023527)
HIX0023527
HIT000052661
(
BC042147
)
(Small conductance calcium-activated potassium channel protein 3; SK3; SKCa 3; SKCa3; KCa2.3;)
genome : 154,679,916 - 154,832,319 (152,404)
query : 1 - 1,948 (1,948/1,965)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993)5'
coverage = 1.000
InterPro :
IPR004178 : Calmodulin-binding domain
IPR013099 : Two pore domain potassium channel domain
IPR015449 : Potassium channel, calcium-activated, SK
GO :
0005516 : Molecular Function : calmodulin binding
0006813 : Biological Process : potassium ion transport
0015269 : Molecular Function : calcium-activated potassium channel activity
0016021 : Cellular Component : integral component of membrane
0016286 : Molecular Function : small conductance calcium-activated potassium channel activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023527)
HIX0023527
HIT000245984
(
AJ251016
)
Representative transcript
(Small conductance calcium-activated potassium channel protein 3; SK3; SKCa 3; SKCa3; KCa2.3;)
genome : 154,679,916 - 154,842,754 (162,839)
query : 20 - 3,080 (3,061/3,095)
8 exons
identity = 0.994
3'(0.999;1.000;1.000;1.000;1.000;0.998;1.000;
0.988)5'
coverage = 0.994
InterPro :
IPR004178 : Calmodulin-binding domain
IPR013099 : Two pore domain potassium channel domain
IPR015449 : Potassium channel, calcium-activated, SK
GO :
0005516 : Molecular Function : calmodulin binding
0006813 : Biological Process : potassium ion transport
0015269 : Molecular Function : calcium-activated potassium channel activity
0016021 : Cellular Component : integral component of membrane
0016286 : Molecular Function : small conductance calcium-activated potassium channel activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023527)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB170809
Rattus
sp. (Rat) : AF292389
Mus
sp. (Mouse) : AK137738
Danio
sp. (Zebrafish) : BC133827
Oryzias
sp. (Medaka) : ENSORLT00000012519
Pongo
sp. (Orangutan) : ENSPPYT00000000931
Tetraodon
sp. (Tetraodon) : GSTENT00033938001
Takifugu
sp. (Fugu) : SINFRUT00000162062
Monodelphis
sp. (Opossum) : XM_001366387
Equus
sp. (Horse) : XM_001497582
Danio
sp. (Zebrafish) : XM_001921759
Canis
sp. (Dog) : XM_547563
Bos
sp. (Cow) : XM_868686
Pan
sp. (Chimpanzee) : XR_020328
HIX0023527
HIT000314418 (
ENST00000361147
)
(Small conductance calcium-activated potassium channel protein 3; SK3; SKCa 3; SKCa3; KCa2.3;)
genome : 154,679,916 - 154,832,319 (152,404)
query : 1 - 1,948 (1,948/1,962)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023527)
HIX0023527
HIT000079662
(
AF438203
)
(Small conductance calcium-activated potassium channel protein 3; SK3; SKCa 3; SKCa3; KCa2.3;)
genome : 154,679,908 - 154,832,316 (152,409)
query : 1 - 1,953 (1,953/1,953)
8 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;1.000;0.998;1.000;
0.993)5'
coverage = 1.000
InterPro :
IPR004178 : Calmodulin-binding domain
IPR013099 : Two pore domain potassium channel domain
IPR015449 : Potassium channel, calcium-activated, SK
GO :
0005516 : Molecular Function : calmodulin binding
0006813 : Biological Process : potassium ion transport
0015269 : Molecular Function : calcium-activated potassium channel activity
0016021 : Cellular Component : integral component of membrane
0016286 : Molecular Function : small conductance calcium-activated potassium channel activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023527)
HIX0023527
HIT000110804 (
ENST00000271915
)
(Small conductance calcium-activated potassium channel protein 3; SK3; SKCa 3; SKCa3; KCa2.3;)
genome : 154,680,002 - 154,842,756 (162,755)
query : 1 - 2,962 (2,962/2,962)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023527)
HIX0023527
HIT000083835
(
AY049734
)
(Small conductance calcium-activated potassium channel protein 3; SK3; SKCa 3; SKCa3; KCa2.3;)
genome : 154,680,340 - 154,842,507 (162,168)
query : 1 - 2,393 (2,393/2,393)
8 exons
identity = 0.991
3'(1.000;1.000;1.000;1.000;1.000;0.993;1.000;
0.981)5'
coverage = 1.000
InterPro :
IPR004178 : Calmodulin-binding domain
IPR013099 : Two pore domain potassium channel domain
IPR015449 : Potassium channel, calcium-activated, SK
GO :
0005516 : Molecular Function : calmodulin binding
0006813 : Biological Process : potassium ion transport
0015269 : Molecular Function : calcium-activated potassium channel activity
0016021 : Cellular Component : integral component of membrane
0016286 : Molecular Function : small conductance calcium-activated potassium channel activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023527)
HIX0023527
HIT000063075
(
AF031815
)
(Small conductance calcium-activated potassium channel protein 3; SK3; SKCa 3; SKCa3; KCa2.3;)
genome : 154,680,425 - 154,842,726 (162,302)
query : 1 - 2,509 (2,509/2,521)
8 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;0.995;0.990;
0.995)5'
coverage = 1.000
InterPro :
IPR004178 : Calmodulin-binding domain
IPR013099 : Two pore domain potassium channel domain
IPR015449 : Potassium channel, calcium-activated, SK
GO :
0005516 : Molecular Function : calmodulin binding
0006813 : Biological Process : potassium ion transport
0015269 : Molecular Function : calcium-activated potassium channel activity
0016021 : Cellular Component : integral component of membrane
0016286 : Molecular Function : small conductance calcium-activated potassium channel activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023527)
HIX0023527
HIT000084709
(
AY138900
)
(Small conductance calcium-activated potassium channel protein 3 isoform b.)
genome : 154,680,428 - 154,840,795 (160,368)
query : 1 - 1,658 (1,658/1,658)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.998;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR004178 : Calmodulin-binding domain
IPR013099 : Two pore domain potassium channel domain
IPR015449 : Potassium channel, calcium-activated, SK
GO :
0005516 : Molecular Function : calmodulin binding
0006813 : Biological Process : potassium ion transport
0015269 : Molecular Function : calcium-activated potassium channel activity
0016021 : Cellular Component : integral component of membrane
0016286 : Molecular Function : small conductance calcium-activated potassium channel activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023527)
HIX0023527
HIT000312199 (
ENST00000358505
)
(Small conductance calcium-activated potassium channel protein 3 isoform b.)
genome : 154,680,428 - 154,840,795 (160,368)
query : 1 - 1,658 (1,658/1,658)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023527)
HIX0023527
HIT000251276
(
AY258142
)
(Small conductance calcium-activated potassium channel protein 3; SK3; SKCa 3; SKCa3; KCa2.3;)
genome : 154,680,452 - 154,842,440 (161,989)
query : 1 - 2,214 (2,214/2,214)
8 exons
identity = 0.991
3'(1.000;1.000;1.000;1.000;1.000;0.998;1.000;
0.981)5'
coverage = 1.000
InterPro :
IPR004178 : Calmodulin-binding domain
IPR013099 : Two pore domain potassium channel domain
IPR015449 : Potassium channel, calcium-activated, SK
GO :
0005516 : Molecular Function : calmodulin binding
0006813 : Biological Process : potassium ion transport
0015269 : Molecular Function : calcium-activated potassium channel activity
0016021 : Cellular Component : integral component of membrane
0016286 : Molecular Function : small conductance calcium-activated potassium channel activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023527)
HIX0023527
HIT000325427
(
Y08263
)
(Small conductance calcium-activated potassium channel protein 3; SK3; SKCa 3; SKCa3; KCa2.3;)
genome : 154,698,429 - 154,842,726 (144,298)
query : 1 - 1,953 (1,953/1,956)
5 exons
identity = 0.986
3'(1.000;1.000;0.971;0.979;0.989)5'
coverage = 0.998
InterPro :
IPR013099 : Two pore domain potassium channel domain
IPR015449 : Potassium channel, calcium-activated, SK
GO :
0006813 : Biological Process : potassium ion transport
0016021 : Cellular Component : integral component of membrane
0016286 : Molecular Function : small conductance calcium-activated potassium channel activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023527)
HIX0023527
HIT000428943
(
AK310077
)
(Small conductance calcium-activated potassium channel protein 3 isoform b.)
genome : 154,743,990 - 154,842,754 (98,765)
query : 1 - 2,238 (2,238/2,238)
3 exons
identity = 0.992
3'(0.999;1.000;0.986)5'
coverage = 1.000
InterPro :
IPR015449 : Potassium channel, calcium-activated, SK
GO :
0006813 : Biological Process : potassium ion transport
0016021 : Cellular Component : integral component of membrane
0016286 : Molecular Function : small conductance calcium-activated potassium channel activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023527)
HIX0203603
HIT000452596_05
(
DQ586065
)
Representative transcript
(Non-protein coding transcript.)
genome : 154,827,418 - 154,827,447 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203603)
HIX0023527
HIT000057793
(
BX649146
)
(Conserved hypothetical protein.)
genome : 154,833,448 - 154,840,461 (7,014)
query : 1 - 7,013 (7,013/7,032)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 7.5, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023527)
HIX0001026
HIT000032596
(
BC006089
)
Representative transcript
(Phosphomevalonate kinase; PMKase; hPMK; EC=2.7.4.2;)
genome : 154,897,210 - 154,909,467 (12,258)
query : 1 - 1,280 (1,280/1,339)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.956
EC number :
EC 2.7.4.2
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR005919 : Higher eukaryotic phosphomevalonate kinase
GO :
0004631 : Molecular Function : phosphomevalonate kinase activity
0005737 : Cellular Component : cytoplasm
0006695 : Biological Process : cholesterol biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, mito 8.5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001026)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK150483
Rattus
sp. (Rat) : BC086349
Bos
sp. (Cow) : BC112509
Danio
sp. (Zebrafish) : BC135045
Tetraodon
sp. (Tetraodon) : CR697255
Equus
sp. (Horse) : ENSECAT00000016967
Pongo
sp. (Orangutan) : ENSPPYT00000000929
Takifugu
sp. (Fugu) : SINFRUT00000178599
Macaca
sp. (Macaque) : XM_001114509
Monodelphis
sp. (Opossum) : XM_001373383
Pan
sp. (Chimpanzee) : XM_513842
Canis
sp. (Dog) : XM_849989
HIX0001026
HIT000033385
(
BC007694
)
(Phosphomevalonate kinase; PMKase; hPMK; EC=2.7.4.2;)
genome : 154,897,216 - 154,909,397 (12,182)
query : 1 - 1,204 (1,204/1,225)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.2
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR005919 : Higher eukaryotic phosphomevalonate kinase
GO :
0004631 : Molecular Function : phosphomevalonate kinase activity
0005737 : Cellular Component : cytoplasm
0006695 : Biological Process : cholesterol biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, mito 8.5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001026)
HIX0001026
HIT000203147 (
NM_006556
)
(Phosphomevalonate kinase; PMKase; hPMK; EC=2.7.4.2;)
genome : 154,897,208 - 154,909,484 (12,277)
query : 1 - 1,299 (1,299/1,307)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.994
EC number :
EC 2.7.4.2
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, mito 8.5, E.R._mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001026)
HIX0001026
HIT000349747 (
ENST00000368467
)
(Phosphomevalonate kinase; PMKase; hPMK; EC=2.7.4.2;)
genome : 154,897,210 - 154,909,467 (12,258)
query : 1 - 1,280 (1,280/1,280)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.2
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, mito 8.5, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001026)
HIX0001026
HIT000194009
(
L77213
)
(Phosphomevalonate kinase; PMKase; hPMK; EC=2.7.4.2;)
genome : 154,897,217 - 154,909,178 (11,962)
query : 19 - 1,002 (984/1,002)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.982
EC number :
EC 2.7.4.2
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR005919 : Higher eukaryotic phosphomevalonate kinase
GO :
0004631 : Molecular Function : phosphomevalonate kinase activity
0005737 : Cellular Component : cytoplasm
0006695 : Biological Process : cholesterol biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, mito 8.5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001026)
HIX0001026
HIT000431669
(
AK312803
)
(Phosphomevalonate kinase; PMKase; hPMK; EC=2.7.4.2;)
genome : 154,897,605 - 154,909,443 (11,839)
query : 1 - 861 (861/861)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.2
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR005919 : Higher eukaryotic phosphomevalonate kinase
GO :
0004631 : Molecular Function : phosphomevalonate kinase activity
0005737 : Cellular Component : cytoplasm
0006695 : Biological Process : cholesterol biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, mito 8.5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001026)
HIX0001026
HIT000266756
(
BT019976
)
(Phosphomevalonate kinase; PMKase; hPMK; EC=2.7.4.2;)
genome : 154,897,605 - 154,909,161 (11,557)
query : 1 - 579 (579/579)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.2
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR005919 : Higher eukaryotic phosphomevalonate kinase
GO :
0004631 : Molecular Function : phosphomevalonate kinase activity
0005737 : Cellular Component : cytoplasm
0006695 : Biological Process : cholesterol biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, mito 8.5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001026)
HIX0001026
HIT000268867
(
CR541998
)
(Phosphomevalonate kinase; PMKase; hPMK; EC=2.7.4.2;)
genome : 154,897,608 - 154,909,161 (11,554)
query : 1 - 576 (576/576)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.2
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR005919 : Higher eukaryotic phosphomevalonate kinase
GO :
0004631 : Molecular Function : phosphomevalonate kinase activity
0005737 : Cellular Component : cytoplasm
0006695 : Biological Process : cholesterol biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, mito 8.5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001026)
HIX0001107
HIT000037719
(
BC016852
)
Representative transcript
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,916,560 - 154,926,236 (9,677)
query : 21 - 3,195 (3,175/3,213)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 12, E.R. 8, cyto_mito 4, E.R._golg 4, cyto 3.5,
mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168250
Mus
sp. (Mouse) : AK028858
Rattus
sp. (Rat) : BC129100
Bos
sp. (Cow) : BC148133
Pongo
sp. (Orangutan) : ENSPPYT00000000927
Pan
sp. (Chimpanzee) : ENSPTRT00000002554
Monodelphis
sp. (Opossum) : XM_001373476
Canis
sp. (Dog) : XM_537257
HIX0001107
HIT000207970 (
NM_020524
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,916,560 - 154,926,236 (9,677)
query : 21 - 3,195 (3,175/3,213)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 12, E.R. 8, cyto_mito 4, E.R._golg 4, cyto 3.5,
mito 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000005771
(
AK022497
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,916,552 - 154,928,597 (12,046)
query : 2 - 3,145 (3,144/3,145)
10 exons
identity = 0.998
3'(0.998;0.998;1.000;1.000;1.000;0.996;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 18, E.R. 5, nucl 4, cyto 4, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000349745 (
ENST00000368465
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,916,552 - 154,928,597 (12,046)
query : 1 - 3,144 (3,144/3,144)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 18, E.R. 5, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000349743 (
ENST00000368463
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,916,556 - 154,928,580 (12,025)
query : 1 - 3,212 (3,212/3,212)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 12, E.R. 8, cyto_mito 4, E.R._golg 4, cyto 3.5,
mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000006493
(
AK023219
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,916,918 - 154,928,580 (11,663)
query : 1 - 2,645 (2,645/2,645)
12 exons
identity = 0.997
3'(0.994;1.000;0.999;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.972)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, E.R. 8, nucl 4, cyto_mito 4, E.R._golg 4,
cyto 3.5, mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000498487
(
AK303863
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,917,061 - 154,928,583 (11,523)
query : 1 - 2,191 (2,191/2,191)
8 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.954;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, plas 6, E.R. 6, mito 3, E.R._golg 3,
cysk_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000638925 (
ENST00000539880
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,917,061 - 154,928,583 (11,523)
query : 1 - 2,191 (2,191/2,191)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.966;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, plas 6, E.R. 6, mito 3, E.R._golg 3,
cysk_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000495611
(
AK300987
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,917,198 - 154,928,585 (11,388)
query : 1 - 1,918 (1,918/1,918)
6 exons
identity = 0.993
3'(1.000;1.000;0.992;1.000;1.000;0.797)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, nucl 15, cyto 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000217397
(
U00952
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,917,254 - 154,918,749 (1,496)
query : 1 - 1,038 (1,038/1,047)
2 exons
identity = 0.988
3'(1.000;0.982)5'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 7, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000074366
(
AF221521
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,917,429 - 154,928,580 (11,152)
query : 9 - 2,353 (2,345/2,353)
11 exons
identity = 0.995
3'(0.953;0.997;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 12, E.R. 8, cyto_mito 4, E.R._golg 4, cyto 3.5,
mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000498037
(
AK303413
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,917,486 - 154,928,583 (11,098)
query : 1 - 1,865 (1,865/1,865)
8 exons
identity = 0.999
3'(1.000;0.999;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 7.5, E.R. 7, mito 6, extr_plas 5.5,
mito_pero 4.5, nucl 3, lyso 3, plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000641504 (
ENST00000542459
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,917,486 - 154,928,583 (11,098)
query : 1 - 1,865 (1,865/1,865)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 7.5, E.R. 7, mito 6, extr_plas 5.5,
mito_pero 4.5, nucl 3, lyso 3, plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000434417
(
AK315551
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,917,500 - 154,928,618 (11,119)
query : 3 - 2,307 (2,305/2,307)
11 exons
identity = 0.999
3'(1.000;0.998;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 12, E.R. 8, cyto_mito 4, E.R._golg 4, cyto 3.5,
mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000495168
(
AK300544
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,918,046 - 154,928,603 (10,558)
query : 1 - 1,003 (1,003/1,005)
6 exons
identity = 0.997
3'(1.000;0.982;1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15, cyto 10.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000389527
(
BC127909
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,918,429 - 154,918,714 (286)
query : 10 - 295 (286/304)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 0.941
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000389528
(
BC127910
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,918,429 - 154,918,714 (286)
query : 10 - 295 (286/304)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 0.941
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000349740 (
ENST00000368460
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,919,574 - 154,928,587 (9,014)
query : 1 - 1,175 (1,175/1,175)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 19, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000601771 (
ENST00000498553
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,919,895 - 154,926,233 (6,339)
query : 1 - 777 (777/777)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, extr_plas 11, mito 10, plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000429578
(
AK310712
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,920,113 - 154,928,614 (8,502)
query : 1 - 886 (886/892)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 0.993
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, extr_plas 10.5, cyto 5, mito 4, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000593798 (
ENST00000490230
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,920,129 - 154,928,599 (8,471)
query : 1 - 853 (853/853)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 14, cyto 9, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000596585 (
ENST00000493133
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,923,705 - 154,926,233 (2,529)
query : 1 - 707 (707/707)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 8.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0001107
HIT000429254
(
AK310388
)
(Pre-B-cell leukemia transcription factor-interacting protein 1; Hematopoietic PBX-interacting protein;)
genome : 154,923,803 - 154,927,803 (4,001)
query : 1 - 874 (874/874)
6 exons
identity = 0.999
3'(1.000;1.000;0.992;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 13.5, cyto 11.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001107)
HIX0213754
HIT000088156
(
BC013725
)
(Zinc finger, PHD-finger domain containing protein.)
genome : 154,929,502 - 154,931,957 (2,456)
query : 1 - 2,456 (2,456/2,508)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 11.3333, extr 10, cyto 5.5,
cyto_pero 3.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213754)
HIX0213754
HIT000212309 (
NM_138300
)
(Zinc finger, PHD-finger domain containing protein.)
genome : 154,929,502 - 154,934,258 (4,757)
query : 1 - 3,180 (3,180/3,227)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213754)
HIX0213754
HIT000050459
(
BC006132
)
Representative transcript
(Zinc finger, PHD-finger domain containing protein.)
genome : 154,929,502 - 154,934,224 (4,723)
query : 1 - 3,146 (3,146/3,193)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213754)
HIX0213754
HIT000076427
(
AF289598
)
(Zinc finger, PHD-finger domain containing protein.)
genome : 154,929,502 - 154,934,010 (4,509)
query : 1 - 2,931 (2,931/2,977)
3 exons
identity = 0.995
3'(0.994;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9.5, cyto_mito 9, nucl 8.5, cyto_nucl 8.5,
cyto 7, cyto_pero 5.66667, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213754)
HIX0213754
HIT000041418
(
BC032099
)
(Zinc finger, PHD-finger domain containing protein.)
genome : 154,929,502 - 154,934,224 (4,723)
query : 1 - 3,145 (3,145/3,190)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213754)
HIX0213754
HIT000349737 (
ENST00000368457
)
(Zinc finger, PHD-finger domain containing protein.)
genome : 154,929,502 - 154,934,224 (4,723)
query : 1 - 3,146 (3,146/3,146)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213754)
HIX0213754
HIT000017256
(
AK092389
)
(Zinc finger, PHD-finger domain containing protein.)
genome : 154,929,503 - 154,934,207 (4,705)
query : 1 - 3,128 (3,128/3,128)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213754)
HIX0213754
HIT000015412
(
AK090545
)
(Zinc finger, PHD-finger domain containing protein.)
genome : 154,929,503 - 154,931,999 (2,497)
query : 1 - 2,497 (2,497/2,497)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, extr 10, nucl 10, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213754)
HIX0213754
HIT000020280
(
AK095425
)
(Zinc finger, FYVE/PHD-type domain containing protein.)
genome : 154,929,503 - 154,931,439 (1,937)
query : 1 - 1,938 (1,938/1,938)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR011011 : Zinc finger, FYVE/PHD-type
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213754)
HIX0213754
HIT000349736 (
ENST00000368456
)
(Zinc finger, PHD-finger domain containing protein.)
genome : 154,931,216 - 154,934,512 (3,297)
query : 1 - 1,306 (1,306/1,306)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213754)
HIX0213754
HIT000079961
(
AF457208
)
(Zinc finger, PHD-finger domain containing protein.)
genome : 154,931,255 - 154,934,052 (2,798)
query : 1 - 1,221 (1,221/1,221)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213754)
HIX0213754
HIT000563977
(
AB593176
)
(Hypothetical protein.)
genome : 154,934,030 - 154,934,658 (629)
query : 1 - 629 (629/629)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 9.16667, nucl 7.5, cyto 7.5,
cyto_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213754)
HIX0001108
HIT000221210
(
U73377
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,934,774 - 154,943,196 (8,423)
query : 1 - 3,455 (3,455/3,664)
12 exons
identity = 0.997
3'(0.997;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994)5'
coverage = 0.943
InterPro :
IPR000980 : SH2 domain
IPR006019 : Phosphotyrosine interaction domain, Shc-like
IPR006020 : PTB/PI domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000199897 (
NM_003029
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,934,774 - 154,946,959 (12,186)
query : 1 - 3,169 (3,169/3,195)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000559620 (
NM_001130041
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,934,774 - 154,946,959 (12,186)
query : 1 - 3,166 (3,166/3,192)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000656907 (
NM_001202859
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,934,774 - 154,946,959 (12,186)
query : 1 - 3,166 (3,166/3,192)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000036552
(
BC014158
)
Representative transcript
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,934,774 - 154,946,840 (12,067)
query : 1 - 3,050 (3,050/3,076)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
IPR006019 : Phosphotyrosine interaction domain, Shc-like
IPR006020 : PTB/PI domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK049357
Rattus
sp. (Rat) : BC088298
Bos
sp. (Cow) : BC122688
Pongo
sp. (Orangutan) : CR859992
Oryzias
sp. (Medaka) : ENSORLT00000012224
Tetraodon
sp. (Tetraodon) : GSTENT00033961001
Takifugu
sp. (Fugu) : SINFRUT00000174503
Macaca
sp. (Macaque) : XM_001112447
Monodelphis
sp. (Opossum) : XM_001366442
Equus
sp. (Horse) : XM_001497785
Danio
sp. (Zebrafish) : XM_001921590
Pan
sp. (Chimpanzee) : XM_513843
Canis
sp. (Dog) : XM_547561
HIX0001108
HIT000042029
(
BC033925
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,934,774 - 154,943,223 (8,450)
query : 2 - 2,880 (2,879/2,899)
10 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.950;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
IPR006019 : Phosphotyrosine interaction domain, Shc-like
IPR006020 : PTB/PI domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 6, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000322913
(
X68148
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,934,774 - 154,946,802 (12,029)
query : 1 - 3,013 (3,013/3,031)
13 exons
identity = 0.997
3'(0.996;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.987)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
IPR006019 : Phosphotyrosine interaction domain, Shc-like
IPR006020 : PTB/PI domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000055796
(
BX647149
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,934,774 - 154,943,223 (8,450)
query : 1 - 3,482 (3,482/3,497)
12 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
IPR006019 : Phosphotyrosine interaction domain, Shc-like
IPR006020 : PTB/PI domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000318900 (
NM_183001
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,934,774 - 154,943,223 (8,450)
query : 1 - 3,478 (3,478/3,493)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000559619 (
NM_001130040
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,934,774 - 154,943,223 (8,450)
query : 1 - 3,481 (3,481/3,496)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000055783
(
BX647136
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,934,774 - 154,943,187 (8,414)
query : 1 - 3,394 (3,394/3,409)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.984;1.000;0.998;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
IPR006019 : Phosphotyrosine interaction domain, Shc-like
IPR006020 : PTB/PI domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000349730 (
ENST00000368450
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,934,774 - 154,946,852 (12,079)
query : 1 - 3,059 (3,059/3,059)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000349733 (
ENST00000368453
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,934,774 - 154,946,852 (12,079)
query : 1 - 3,062 (3,062/3,062)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000349729 (
ENST00000368449
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,934,774 - 154,943,223 (8,450)
query : 1 - 2,881 (2,881/2,881)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 8, mito_pero 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000546050 (
ENST00000448116
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,934,774 - 154,943,223 (8,450)
query : 1 - 3,481 (3,481/3,481)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000349725 (
ENST00000368445
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,934,774 - 154,943,217 (8,444)
query : 1 - 3,472 (3,472/3,472)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000021024
(
AK096169
)
(SHC-transforming protein 1 isoform 2.)
genome : 154,934,775 - 154,943,223 (8,449)
query : 1 - 3,463 (3,463/3,463)
12 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.976)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
IPR006019 : Phosphotyrosine interaction domain, Shc-like
IPR006020 : PTB/PI domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 11.5, mito 7, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000328784
(
AB208849
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,934,775 - 154,941,057 (6,283)
query : 2 - 4,205 (4,204/4,205)
8 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
IPR006019 : Phosphotyrosine interaction domain, Shc-like
IPR006020 : PTB/PI domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 21, cyto_nucl 5.5, nucl 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000087712
(
BC011813
)
(SHC-transforming protein 1 isoform 3.)
genome : 154,935,763 - 154,943,217 (7,455)
query : 1 - 2,484 (2,484/2,502)
12 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
IPR006019 : Phosphotyrosine interaction domain, Shc-like
IPR006020 : PTB/PI domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000089235
(
BC017283
)
(SHC-transforming protein 1 isoform 3.)
genome : 154,935,763 - 154,943,217 (7,455)
query : 1 - 2,484 (2,484/2,502)
12 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
IPR006019 : Phosphotyrosine interaction domain, Shc-like
IPR006020 : PTB/PI domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000491410
(
AK296786
)
(SHC-transforming protein 1 isoform 2.)
genome : 154,935,778 - 154,943,220 (7,443)
query : 1 - 2,288 (2,288/2,288)
13 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.849)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
IPR006019 : Phosphotyrosine interaction domain, Shc-like
IPR006020 : PTB/PI domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000594214 (
ENST00000490667
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,935,805 - 154,938,238 (2,434)
query : 1 - 727 (727/727)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.5, nucl 15, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000434708
(
AK315842
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,935,806 - 154,946,870 (11,065)
query : 1 - 2,048 (2,048/2,048)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
IPR006019 : Phosphotyrosine interaction domain, Shc-like
IPR006020 : PTB/PI domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000049285
(
AK130014
)
(SHC-transforming protein 1 isoform 2.)
genome : 154,935,835 - 154,946,851 (11,017)
query : 20 - 1,753 (1,734/1,755)
11 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.875;1.000)5'
coverage = 0.988
InterPro :
IPR000980 : SH2 domain
IPR006019 : Phosphotyrosine interaction domain, Shc-like
IPR006020 : PTB/PI domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 11, cyto 11, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000542598 (
ENST00000444664
)
(SHC-transforming protein 3; Neuronal Shc; N-Shc; SHC-transforming protein C; Src homology 2 domain-containing-transforming protein C3; SH2 domain protein C3;)
genome : 154,936,153 - 154,938,966 (2,814)
query : 1 - 1,305 (1,305/1,305)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 9.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000424940
(
AK292143
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,936,156 - 154,946,959 (10,804)
query : 1 - 1,787 (1,787/1,787)
13 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
IPR006019 : Phosphotyrosine interaction domain, Shc-like
IPR006020 : PTB/PI domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000384462
(
AK225332
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,936,219 - 154,943,148 (6,930)
query : 1 - 1,958 (1,958/1,958)
12 exons
identity = 0.999
3'(1.000;0.996;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
IPR006019 : Phosphotyrosine interaction domain, Shc-like
IPR006020 : PTB/PI domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000487468
(
AB451255
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,936,281 - 154,943,002 (6,722)
query : 1 - 1,753 (1,753/1,755)
12 exons
identity = 0.999
3'(1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000980 : SH2 domain
IPR006019 : Phosphotyrosine interaction domain, Shc-like
IPR006020 : PTB/PI domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000487592
(
AB451379
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,936,282 - 154,943,002 (6,721)
query : 1 - 1,752 (1,752/1,752)
12 exons
identity = 0.999
3'(1.000;1.000;0.985;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
IPR006019 : Phosphotyrosine interaction domain, Shc-like
IPR006020 : PTB/PI domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000512049 (
ENST00000414115
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,938,468 - 154,941,369 (2,902)
query : 1 - 780 (780/780)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 9.5, extr 8, nucl 7.5, mito 4,
extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000542113 (
ENST00000444179
)
(SHC-transforming protein 1; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,938,901 - 154,941,350 (2,450)
query : 1 - 550 (550/550)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.5, extr 8, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000510104 (
ENST00000412170
)
(SHC-transforming protein 1; SHC-transforming protein 3; SHC-transforming protein A; Src homology 2 domain-containing-transforming protein C1; SH2 domain protein C1;)
genome : 154,940,146 - 154,946,812 (6,667)
query : 1 - 692 (692/692)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, extr 10, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0001108
HIT000347722 (
ENST00000366442
)
(SHC-transforming protein 1 isoform 4.)
genome : 154,940,978 - 154,946,871 (5,894)
query : 1 - 780 (780/780)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001108)
HIX0199959
HIT000198758 (
NM_001826
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,118 - 154,951,725 (4,608)
query : 1 - 816 (816/834)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000562405 (
NR_024163
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,118 - 154,951,725 (4,608)
query : 1 - 924 (924/942)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 9, extr 7, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000349719 (
ENST00000368439
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,129 - 154,951,724 (4,596)
query : 1 - 912 (912/912)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 9, extr 7, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000264275
(
BC070320
)
Representative transcript
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,157 - 154,951,722 (4,566)
query : 1 - 774 (774/806)
3 exons
identity = 0.999
5'(1.000;1.000;0.998)3'
coverage = 0.997
InterPro :
IPR000789 : Cyclin-dependent kinase, regulatory subunit
GO :
0007049 : Biological Process : cell cycle
0016538 : Molecular Function : cyclin-dependent protein serine/threonine kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AB025409
Danio
sp. (Zebrafish) : BC077092
Bos
sp. (Cow) : BC120301
Tetraodon
sp. (Tetraodon) : CR708764
Canis
sp. (Dog) : ENSCAFT00000027140
Equus
sp. (Horse) : ENSECAT00000003406
Monodelphis
sp. (Opossum) : ENSMODT00000021754
Pongo
sp. (Orangutan) : ENSPPYT00000000923
Pan
sp. (Chimpanzee) : ENSPTRT00000002560
Takifugu
sp. (Fugu) : SINFRUT00000137450
Takifugu
sp. (Fugu) : SINFRUT00000150093
Macaca
sp. (Macaque) : XM_001114905
Rattus
sp. (Rat) : XM_579997
HIX0199959
HIT000264274
(
BC070319
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,157 - 154,951,718 (4,562)
query : 1 - 770 (770/802)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR000789 : Cyclin-dependent kinase, regulatory subunit
GO :
0007049 : Biological Process : cell cycle
0016538 : Molecular Function : cyclin-dependent protein serine/threonine kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000430635
(
AK311769
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,157 - 154,951,253 (4,097)
query : 1 - 305 (305/305)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000789 : Cyclin-dependent kinase, regulatory subunit
GO :
0007049 : Biological Process : cell cycle
0016538 : Molecular Function : cyclin-dependent protein serine/threonine kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000349716 (
ENST00000368436
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,159 - 154,951,160 (4,002)
query : 1 - 820 (820/820)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 17, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000425932
(
AK307066
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,170 - 154,952,930 (5,761)
query : 1 - 2,077 (2,077/2,077)
3 exons
identity = 0.999
5'(1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000789 : Cyclin-dependent kinase, regulatory subunit
GO :
0007049 : Biological Process : cell cycle
0016538 : Molecular Function : cyclin-dependent protein serine/threonine kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 9, extr 7, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000033421
(
BC007751
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,175 - 154,951,725 (4,551)
query : 1 - 759 (759/787)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000789 : Cyclin-dependent kinase, regulatory subunit
GO :
0007049 : Biological Process : cell cycle
0016538 : Molecular Function : cyclin-dependent protein serine/threonine kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000118173_01 (
ENST00000308987
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,175 - 154,951,725 (4,551)
query : 1 - 759 (759/759)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000639833_01 (
ENST00000540788
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,222 - 154,951,307 (4,086)
query : 33 - 326 (294/326)
3 exons
identity = 0.990
5'(0.966;1.000;0.991)3'
coverage = 0.902
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000075897
(
AF274941
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,196 - 154,951,716 (4,521)
query : 1 - 724 (724/749)
3 exons
identity = 0.967
5'(1.000;1.000;0.954)3'
coverage = 0.995
InterPro :
IPR000789 : Cyclin-dependent kinase, regulatory subunit
GO :
0007049 : Biological Process : cell cycle
0016538 : Molecular Function : cyclin-dependent protein serine/threonine kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000037227
(
BC015629
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,196 - 154,951,720 (4,525)
query : 1 - 733 (733/750)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000789 : Cyclin-dependent kinase, regulatory subunit
GO :
0007049 : Biological Process : cell cycle
0016538 : Molecular Function : cyclin-dependent protein serine/threonine kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000076073
(
AF279897
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,196 - 154,951,687 (4,492)
query : 1 - 701 (701/727)
3 exons
identity = 0.989
5'(1.000;1.000;0.984)3'
coverage = 0.997
InterPro :
IPR000789 : Cyclin-dependent kinase, regulatory subunit
GO :
0007049 : Biological Process : cell cycle
0016538 : Molecular Function : cyclin-dependent protein serine/threonine kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000321950
(
X54941
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,214 - 154,951,722 (4,509)
query : 2 - 717 (716/717)
3 exons
identity = 0.999
5'(1.000;1.000;0.998)3'
coverage = 0.999
InterPro :
IPR000789 : Cyclin-dependent kinase, regulatory subunit
GO :
0007049 : Biological Process : cell cycle
0016538 : Molecular Function : cyclin-dependent protein serine/threonine kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000621530_01 (
ENST00000522230
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,221 - 154,951,247 (4,027)
query : 1 - 235 (235/235)
3 exons
identity = 0.974
5'(0.983;0.984;0.936)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, extr 4, nucl 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000100116
(
BT007196
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,222 - 154,951,251 (4,030)
query : 1 - 238 (238/240)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.992
InterPro :
IPR000789 : Cyclin-dependent kinase, regulatory subunit
GO :
0007049 : Biological Process : cell cycle
0016538 : Molecular Function : cyclin-dependent protein serine/threonine kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000522866_02 (
ENST00000424932
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,222 - 154,951,253 (4,032)
query : 1 - 240 (240/240)
3 exons
identity = 0.963
5'(0.983;0.977;0.906)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000668569_01 (
ENST00000555221
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,222 - 154,951,253 (4,032)
query : 1 - 240 (240/240)
3 exons
identity = 0.967
5'(0.949;0.977;0.962)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000712630_01 (
ENST00000600888
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,222 - 154,951,253 (4,032)
query : 1 - 240 (240/240)
3 exons
identity = 0.996
5'(0.983;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000632979_01 (
ENST00000533906
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,222 - 154,951,249 (4,028)
query : 1 - 236 (236/236)
3 exons
identity = 0.966
5'(0.983;0.969;0.939)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000075899
(
AF274943
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,298 - 154,951,724 (4,427)
query : 1 - 743 (743/772)
3 exons
identity = 0.996
5'(1.000;1.000;0.994)3'
coverage = 0.997
InterPro :
IPR000789 : Cyclin-dependent kinase, regulatory subunit
GO :
0007049 : Biological Process : cell cycle
0016538 : Molecular Function : cyclin-dependent protein serine/threonine kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 9, extr 7, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000581811 (
ENST00000477676
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,947,508 - 154,951,601 (4,094)
query : 1 - 602 (602/602)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.1667, cyto 6.5, extr 6,
mito 5, cyto_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000578511 (
ENST00000474215
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,948,007 - 154,951,717 (3,711)
query : 1 - 739 (739/739)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.1667, cyto 6.5, extr 6,
mito 5, cyto_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0199959
HIT000577680 (
ENST00000473344
)
(Cyclin-dependent kinases regulatory subunit 1; CKS-1;)
genome : 154,948,015 - 154,951,392 (3,378)
query : 1 - 390 (390/390)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.1667, cyto 6.5, extr 6,
mito 5, cyto_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0203899
HIT000659475 (
NR_036212
)
(Non-protein coding transcript.)
genome : 154,948,169 - 154,948,259 (91)
query : 1 - 91 (91/91)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203899)
HIX0203899
HIT000692830 (
ENST00000580920
)
(Non-protein coding transcript.)
genome : 154,948,169 - 154,948,259 (91)
query : 1 - 91 (91/91)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203899)
HIX0199959
HIT000575685 (
ENST00000471245
)
(Cyclin-dependent kinases regulatory subunit; SUC1 homolog;)
genome : 154,949,775 - 154,951,550 (1,776)
query : 1 - 1,166 (1,166/1,166)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.1667, cyto 6.5, extr 6,
mito 5, cyto_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199959)
HIX0213753
HIT000655474 (
NM_001184892
)
(MoaB/Mog domain containing protein.)
genome : 154,955,770 - 154,961,488 (5,719)
query : 1 - 1,876 (1,876/1,911)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.7.2
KEGG pathway :
00740 : Riboflavin metabolism (21)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 14.5, cyto 11.5, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213753)
HIX0213753
HIT000596099 (
ENST00000492620
)
(Conserved hypothetical protein.)
genome : 154,955,814 - 154,960,608 (4,795)
query : 1 - 727 (727/727)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 12, nucl 11, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213753)
HIX0213753
HIT000015409
(
AK090542
)
(FAD synthase isoform 3.)
genome : 154,955,828 - 154,963,682 (7,855)
query : 1 - 2,656 (2,656/2,656)
4 exons
identity = 1.000
5'(1.000;0.999;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.7.2
KEGG pathway :
00740 : Riboflavin metabolism (21)
01100 : Metabolic pathways (1346)
InterPro :
IPR001453 : MoaB/Mog domain
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
GO :
0006777 : Biological Process : Mo-molybdopterin cofactor biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15, nucl 7.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213753)
HIX0213753
HIT000349713 (
ENST00000368433
)
(MoaB/Mog domain containing protein.)
genome : 154,955,828 - 154,963,682 (7,855)
query : 1 - 2,656 (2,656/2,656)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213753)
HIX0213753
HIT000427109
(
AK308243
)
(MoaB/Mog domain containing protein.)
genome : 154,955,836 - 154,961,321 (5,486)
query : 1 - 996 (996/996)
3 exons
identity = 0.991
5'(1.000;1.000;0.988)3'
coverage = 1.000
InterPro :
IPR001453 : MoaB/Mog domain
GO :
0006777 : Biological Process : Mo-molybdopterin cofactor biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 10, cyto 9, nucl 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213753)
HIX0213753
HIT000074267
(
AF218022
)
Representative transcript
(FAD synthase isoform 4.)
genome : 154,955,843 - 154,961,488 (5,646)
query : 1 - 1,803 (1,803/1,838)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.7.2
KEGG pathway :
00740 : Riboflavin metabolism (21)
01100 : Metabolic pathways (1346)
InterPro :
IPR001453 : MoaB/Mog domain
GO :
0006777 : Biological Process : Mo-molybdopterin cofactor biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 14.5, cyto 11.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213753)
HIX0213753
HIT000349711 (
ENST00000368431
)
(MoaB/Mog domain containing protein.)
genome : 154,955,843 - 154,961,488 (5,646)
query : 1 - 1,803 (1,803/1,803)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 14.5, cyto 11.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213753)
HIX0213753
HIT000591077 (
ENST00000487371
)
(MoaB/Mog domain containing protein.)
genome : 154,955,907 - 154,960,909 (5,003)
query : 1 - 757 (757/757)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9.5, cyto_mito 9.16667, extr 8, cyto 7.5,
cyto_nucl 6.66667, cyto_pero 5.66667, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213753)
HIX0213753
HIT000255364
(
AY545550
)
(Hypothetical short protein.)
genome : 154,956,474 - 154,956,906 (433)
query : 2 - 431 (430/431)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 7, nucl 2.5, cyto_nucl 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213753)
HIX0214209
HIT000585721 (
ENST00000481758
)
(Phosphoadenosine phosphosulphate reductase domain containing protein.)
genome : 154,965,065 - 154,965,587 (523)
query : 1 - 408 (408/408)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 6, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214209)
HIX0200026
HIT000207357 (
NM_018655
)
(Lens epithelial cell protein LEP503;)
genome : 154,966,062 - 154,966,791 (730)
query : 1 - 649 (649/671)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 10, cyto_mito 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200026)
HIX0200026
HIT000349707 (
ENST00000368427
)
(Lens epithelial cell protein LEP503;)
genome : 154,966,062 - 154,966,791 (730)
query : 1 - 649 (649/649)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 10, cyto_mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200026)
HIX0200026
HIT000075735
(
AF268478
)
Representative transcript
(Lens epithelial cell protein LEP503;)
genome : 154,966,062 - 154,966,774 (713)
query : 1 - 632 (632/632)
2 exons
identity = 0.998
5'(1.000;0.997)3'
coverage = 1.000
InterPro :
IPR029194 : Lens epithelial cell protein LEP503
GO :
0007275 : Biological Process : multicellular organismal development
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 10, cyto_mito 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200026)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : BC107653
Bos
sp. (Cow) : ENSBTAT00000000215
Canis
sp. (Dog) : ENSCAFT00000027124
Macaca
sp. (Macaque) : ENSMMUT00000009219
Pongo
sp. (Orangutan) : ENSPPYT00000000919
Pan
sp. (Chimpanzee) : ENSPTRT00000002564
Monodelphis
sp. (Opossum) : XM_001366501
Equus
sp. (Horse) : XM_001497954
HIX0200026
HIT000263312
(
BC069140
)
(Lens epithelial cell protein LEP503;)
genome : 154,966,062 - 154,966,324 (263)
query : 1 - 263 (263/280)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.939
InterPro :
IPR029194 : Lens epithelial cell protein LEP503
GO :
0007275 : Biological Process : multicellular organismal development
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 10, cyto_mito 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200026)
HIX0200026
HIT000335674
(
BC096714
)
(Lens epithelial cell protein LEP503;)
genome : 154,966,064 - 154,966,618 (555)
query : 1 - 555 (555/555)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR029194 : Lens epithelial cell protein LEP503
GO :
0007275 : Biological Process : multicellular organismal development
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 10, cyto_mito 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200026)
HIX0200026
HIT000335793
(
BC098148
)
(Lens epithelial cell protein LEP503;)
genome : 154,966,064 - 154,966,618 (555)
query : 1 - 555 (555/555)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR029194 : Lens epithelial cell protein LEP503
GO :
0007275 : Biological Process : multicellular organismal development
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 10, cyto_mito 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200026)
HIX0200026
HIT000335823
(
BC098246
)
(Lens epithelial cell protein LEP503;)
genome : 154,966,064 - 154,966,618 (555)
query : 1 - 555 (555/555)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR029194 : Lens epithelial cell protein LEP503
GO :
0007275 : Biological Process : multicellular organismal development
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 10, cyto_mito 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200026)
HIX0200026
HIT000335830
(
BC098253
)
(Lens epithelial cell protein LEP503;)
genome : 154,966,064 - 154,966,618 (555)
query : 1 - 555 (555/555)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR029194 : Lens epithelial cell protein LEP503
GO :
0007275 : Biological Process : multicellular organismal development
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 10, cyto_mito 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200026)
HIX0200026
HIT000475970 (
ENST00000392487
)
(Lens epithelial cell protein LEP503;)
genome : 154,966,064 - 154,966,618 (555)
query : 1 - 555 (555/555)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 10, cyto_mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200026)
HIX0200026
HIT000487670
(
AB451457
)
(Lens epithelial cell protein LEP503;)
genome : 154,966,084 - 154,966,266 (183)
query : 1 - 183 (183/183)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR029194 : Lens epithelial cell protein LEP503
GO :
0007275 : Biological Process : multicellular organismal development
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 10, cyto_mito 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200026)
HIX0028581
HIT000723317 (
NM_001252406
)
(Zinc finger and BTB domain-containing protein 7B; Krueppel-related zinc finger protein cKrox; hcKrox; T-helper-inducing POZ/Krueppel-like factor; Zinc finger and BTB domain-containing protein 15; Zinc finger protein 67 homolog; Zfp-67; Zinc finger protein 857B; Zinc finger protein Th-POK;)
genome : 154,975,106 - 154,991,001 (15,896)
query : 1 - 4,020 (4,020/4,030)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028581)
HIX0028581
HIT000723678 (
NM_001256455
)
(Zinc finger and BTB domain-containing protein 7B; Krueppel-related zinc finger protein cKrox; hcKrox; T-helper-inducing POZ/Krueppel-like factor; Zinc finger and BTB domain-containing protein 15; Zinc finger protein 67 homolog; Zfp-67; Zinc finger protein 857B; Zinc finger protein Th-POK;)
genome : 154,975,106 - 154,991,001 (15,896)
query : 1 - 3,780 (3,780/3,790)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028581)
HIX0028581
HIT000726327 (
NR_045515
)
(Zinc finger and BTB domain-containing protein 7B; Krueppel-related zinc finger protein cKrox; hcKrox; T-helper-inducing POZ/Krueppel-like factor; Zinc finger and BTB domain-containing protein 15; Zinc finger protein 67 homolog; Zfp-67; Zinc finger protein 857B; Zinc finger protein Th-POK;)
genome : 154,975,106 - 154,991,001 (15,896)
query : 1 - 3,847 (3,847/3,857)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028581)
HIX0028581
HIT000726535 (
NR_046206
)
(Zinc finger and BTB domain-containing protein 7B; Krueppel-related zinc finger protein cKrox; hcKrox; T-helper-inducing POZ/Krueppel-like factor; Zinc finger and BTB domain-containing protein 15; Zinc finger protein 67 homolog; Zfp-67; Zinc finger protein 857B; Zinc finger protein Th-POK;)
genome : 154,975,106 - 154,991,001 (15,896)
query : 1 - 3,703 (3,703/3,713)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028581)
HIX0028581
HIT000727173 (
NR_049765
)
(Zinc finger and BTB domain-containing protein 7B; Krueppel-related zinc finger protein cKrox; hcKrox; T-helper-inducing POZ/Krueppel-like factor; Zinc finger and BTB domain-containing protein 15; Zinc finger protein 67 homolog; Zfp-67; Zinc finger protein 857B; Zinc finger protein Th-POK;)
genome : 154,975,106 - 154,991,001 (15,896)
query : 1 - 3,624 (3,624/3,634)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028581)
HIX0028581
HIT000424416
(
AK291619
)
(Zinc finger and BTB domain-containing protein 7B; Krueppel-related zinc finger protein cKrox; hcKrox; T-helper-inducing POZ/Krueppel-like factor; Zinc finger and BTB domain-containing protein 15; Zinc finger protein 67 homolog; Zfp-67; Zinc finger protein 857B; Zinc finger protein Th-POK;)
genome : 154,975,127 - 154,989,244 (14,118)
query : 1 - 1,925 (1,925/1,925)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999;1.000)3'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR011333 : BTB/POZ fold
IPR013069 : BTB/POZ
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028581)
HIX0028581
HIT000634465 (
ENST00000535420
)
(Zinc finger and BTB domain-containing protein 7B; Krueppel-related zinc finger protein cKrox; hcKrox; T-helper-inducing POZ/Krueppel-like factor; Zinc finger and BTB domain-containing protein 15; Zinc finger protein 67 homolog; Zfp-67; Zinc finger protein 857B; Zinc finger protein Th-POK;)
genome : 154,975,127 - 154,989,244 (14,118)
query : 1 - 1,925 (1,925/1,925)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028581)
HIX0028581
HIT000349706 (
ENST00000368426
)
(Zinc finger and BTB domain-containing protein 7B; Krueppel-related zinc finger protein cKrox; hcKrox; T-helper-inducing POZ/Krueppel-like factor; Zinc finger and BTB domain-containing protein 15; Zinc finger protein 67 homolog; Zfp-67; Zinc finger protein 857B; Zinc finger protein Th-POK;)
genome : 154,975,133 - 154,990,998 (15,866)
query : 1 - 3,594 (3,594/3,594)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028581)
HIX0028581
HIT000035635
(
BC012070
)
Representative transcript
(Zinc finger and BTB domain-containing protein 7B; Krueppel-related zinc finger protein cKrox; hcKrox; T-helper-inducing POZ/Krueppel-like factor; Zinc finger and BTB domain-containing protein 15; Zinc finger protein 67 homolog; Zfp-67; Zinc finger protein 857B; Zinc finger protein Th-POK;)
genome : 154,975,133 - 154,989,481 (14,349)
query : 1 - 2,077 (2,077/2,099)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR011333 : BTB/POZ fold
IPR013069 : BTB/POZ
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028581)
HIX0028581
HIT000591240 (
ENST00000487542
)
(Zinc finger and BTB domain-containing protein 7B; Krueppel-related zinc finger protein cKrox; hcKrox; T-helper-inducing POZ/Krueppel-like factor; Zinc finger and BTB domain-containing protein 15; Zinc finger protein 67 homolog; Zfp-67; Zinc finger protein 857B; Zinc finger protein Th-POK;)
genome : 154,975,202 - 154,987,785 (12,584)
query : 1 - 873 (873/873)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 14.5, cyto 9.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028581)
HIX0028581
HIT000499386
(
AK304762
)
(Zinc finger and BTB domain-containing protein 7B isoform 2.)
genome : 154,975,295 - 154,989,407 (14,113)
query : 1 - 2,237 (2,237/2,237)
5 exons
identity = 0.998
5'(1.000;0.993;1.000;0.998;0.999)3'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR011333 : BTB/POZ fold
IPR013069 : BTB/POZ
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028581)
HIX0028581
HIT000515868 (
ENST00000417934
)
(Zinc finger and BTB domain-containing protein 7B; Krueppel-related zinc finger protein cKrox; hcKrox; T-helper-inducing POZ/Krueppel-like factor; Zinc finger and BTB domain-containing protein 15; Zinc finger protein 67 homolog; Zfp-67; Zinc finger protein 857B; Zinc finger protein Th-POK;)
genome : 154,975,295 - 154,989,407 (14,113)
query : 1 - 2,237 (2,237/2,237)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028581)
HIX0028581
HIT000306342
(
CR749303
)
(Zinc finger and BTB domain-containing protein 7B isoform 2.)
genome : 154,975,316 - 154,989,467 (14,152)
query : 17 - 2,292 (2,276/2,311)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.993
InterPro :
IPR000210 : BTB/POZ-like
IPR011333 : BTB/POZ fold
IPR013069 : BTB/POZ
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028581)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK171443
Monodelphis
sp. (Opossum) : ENSMODT00000021746
Oryzias
sp. (Medaka) : ENSORLT00000013386
Pongo
sp. (Orangutan) : ENSPPYT00000000918
Tetraodon
sp. (Tetraodon) : GSTENT00015377001
Rattus
sp. (Rat) : XM_001072729
Macaca
sp. (Macaque) : XM_001112511
Equus
sp. (Horse) : XM_001916152
Pan
sp. (Chimpanzee) : XM_513845
Canis
sp. (Dog) : XM_547559
Bos
sp. (Cow) : XM_585895
HIX0028581
HIT000566408 (
ENST00000461530
)
(Zinc finger and BTB domain-containing protein 7B; Krueppel-related zinc finger protein cKrox; hcKrox; T-helper-inducing POZ/Krueppel-like factor; Zinc finger and BTB domain-containing protein 15; Zinc finger protein 67 homolog; Zfp-67; Zinc finger protein 857B; Zinc finger protein Th-POK;)
genome : 154,975,316 - 154,987,444 (12,129)
query : 1 - 658 (658/658)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 10.5, cyto 10, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028581)
HIX0028581
HIT000587126 (
ENST00000483226
)
(Non-protein coding transcript.)
genome : 154,975,321 - 154,987,195 (11,875)
query : 1 - 243 (243/243)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028581)
HIX0028581
HIT000061916
(
AF007833
)
(BTB/POZ domain containing protein.)
genome : 154,986,924 - 154,989,457 (2,534)
query : 1 - 2,127 (2,127/2,128)
2 exons
identity = 0.996
5'(0.999;0.990)3'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR011333 : BTB/POZ fold
IPR013069 : BTB/POZ
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028581)
HIX0028581
HIT000113530 (
ENST00000292176
)
(Zinc finger and BTB domain-containing protein 7B; Krueppel-related zinc finger protein cKrox; hcKrox; T-helper-inducing POZ/Krueppel-like factor; Zinc finger and BTB domain-containing protein 15; Zinc finger protein 67 homolog; Zfp-67; Zinc finger protein 857B; Zinc finger protein Th-POK;)
genome : 154,986,924 - 154,989,457 (2,534)
query : 1 - 2,129 (2,129/2,129)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028581)
HIX0001110
HIT000047757
(
AK127884
)
(Hypothetical protein.)
genome : 154,989,433 - 154,990,998 (1,566)
query : 1 - 1,567 (1,567/1,567)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 14, mito_nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001110)
HIX0028581
HIT000389703
(
BC128176
)
(Non-protein coding transcript.)
genome : 154,989,550 - 154,989,738 (189)
query : 5 - 193 (189/201)
1 exon
identity = 0.984
5'(0.984)3'
coverage = 0.940
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028581)
HIX0001110
HIT000589760 (
ENST00000485982
)
(DC-STAMP domain-containing protein 2.)
genome : 154,990,996 - 155,006,257 (15,262)
query : 1 - 2,494 (2,494/2,494)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001110)
HIX0001110
HIT000212860 (
NM_144622
)
(DC-STAMP domain-containing protein 2.)
genome : 154,991,003 - 155,006,257 (15,255)
query : 1 - 2,419 (2,419/2,421)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001110)
HIX0001110
HIT000014110
(
AK057496
)
Representative transcript
(DC-STAMP domain-containing protein 2.)
genome : 154,991,005 - 155,006,257 (15,253)
query : 1 - 2,485 (2,485/2,485)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)5'
coverage = 1.000
InterPro :
IPR012858 : Dendritic cell-specific transmembrane protein-like
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001110)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : ENSBTAT00000014066
Canis
sp. (Dog) : ENSCAFT00000027117
Macaca
sp. (Macaque) : ENSMMUT00000032827
Pongo
sp. (Orangutan) : ENSPPYT00000000917
Takifugu
sp. (Fugu) : SINFRUT00000131528
Rattus
sp. (Rat) : XM_001074559
Monodelphis
sp. (Opossum) : XM_001373612
Equus
sp. (Horse) : XM_001915839
Mus
sp. (Mouse) : XM_283860
Pan
sp. (Chimpanzee) : XM_524891
Danio
sp. (Zebrafish) : XM_679060
HIX0001110
HIT000022847
(
AK097993
)
(DC-STAMP domain-containing protein 2.)
genome : 154,991,007 - 155,003,678 (12,672)
query : 1 - 2,087 (2,087/2,087)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR012858 : Dendritic cell-specific transmembrane protein-like
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 3, extr 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001110)
HIX0001110
HIT000349703 (
ENST00000368423
)
(DC-STAMP domain-containing protein 2.)
genome : 154,991,007 - 155,003,678 (12,672)
query : 1 - 2,087 (2,087/2,087)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 3, extr 2, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001110)
HIX0001110
HIT000349704 (
ENST00000368424
)
(DC-STAMP domain-containing protein 2.)
genome : 154,991,009 - 155,006,236 (15,228)
query : 1 - 2,392 (2,392/2,392)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001110)
HIX0001110
HIT000022322
(
AK097468
)
(DC-STAMP domain-containing protein 2.)
genome : 154,991,009 - 155,005,177 (14,169)
query : 1 - 1,826 (1,826/1,826)
13 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR012858 : Dendritic cell-specific transmembrane protein-like
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001110)
HIX0001110
HIT000572577 (
ENST00000467991
)
(DC-STAMP domain-containing protein 2.)
genome : 154,991,059 - 154,999,069 (8,011)
query : 1 - 718 (718/718)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 8, cyto_nucl 7.16667, extr 4, cyto 4,
cyto_pero 3.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001110)
HIX0001110
HIT000340051
(
BC111794
)
(DC-STAMP domain-containing protein 2.)
genome : 154,991,111 - 155,006,236 (15,126)
query : 1 - 2,290 (2,290/2,290)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :