bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0019294
HIT000032966
(
BC006983
)
(Nucleoside diphosphate kinase 7; NDK 7; NDP kinase 7; EC=2.7.4.6; nm23-H7;)
genome : 169,101,774 - 169,337,032 (235,259)
query : 1 - 1,464 (1,464/1,493)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001564 : Nucleoside diphosphate kinase
IPR006602 : Uncharacterised domain DM10
GO :
0004550 : Molecular Function : nucleoside diphosphate kinase activity
0005524 : Molecular Function : ATP binding
0006165 : Biological Process : nucleoside diphosphate phosphorylation
0006183 : Biological Process : GTP biosynthetic process
0006228 : Biological Process : UTP biosynthetic process
0006241 : Biological Process : CTP biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.6667, cyto_plas 10.3333,
nucl 5.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019294)
HIX0019294
HIT000204307 (
NM_013330
)
(Nucleoside diphosphate kinase 7; NDK 7; NDP kinase 7; EC=2.7.4.6; nm23-H7;)
genome : 169,101,770 - 169,337,186 (235,417)
query : 1 - 1,622 (1,622/1,646)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.6667, cyto_plas 10.3333,
nucl 5.5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019294)
HIX0019294
HIT000319120 (
NM_197972
)
(Nucleoside diphosphate kinase 7 isoform b.)
genome : 169,101,774 - 169,337,186 (235,413)
query : 1 - 1,587 (1,587/1,615)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.6667, cyto_plas 12.3333,
mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019294)
HIX0019294
HIT000349091 (
ENST00000367811
)
(Nucleoside diphosphate kinase 7; NDK 7; NDP kinase 7; EC=2.7.4.6; nm23-H7;)
genome : 169,101,769 - 169,337,205 (235,437)
query : 1 - 1,642 (1,642/1,642)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.6667, cyto_plas 10.3333,
nucl 5.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019294)
HIX0019294
HIT000577015 (
ENST00000472647
)
(Nucleoside diphosphate kinase 7 isoform b.)
genome : 169,101,769 - 169,337,184 (235,416)
query : 1 - 1,590 (1,590/1,590)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.6667, cyto_plas 12.3333,
mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019294)
HIX0019294
HIT000071842
(
AF153191
)
Representative transcript
(Nucleoside diphosphate kinase 7; NDK 7; NDP kinase 7; EC=2.7.4.6; nm23-H7;)
genome : 169,101,771 - 169,337,040 (235,270)
query : 1 - 1,475 (1,475/1,475)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001564 : Nucleoside diphosphate kinase
IPR006602 : Uncharacterised domain DM10
GO :
0004550 : Molecular Function : nucleoside diphosphate kinase activity
0005524 : Molecular Function : ATP binding
0006165 : Biological Process : nucleoside diphosphate phosphorylation
0006183 : Biological Process : GTP biosynthetic process
0006228 : Biological Process : UTP biosynthetic process
0006241 : Biological Process : CTP biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.6667, cyto_plas 10.3333,
nucl 5.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019294)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169065
Mus
sp. (Mouse) : AK133221
Danio
sp. (Zebrafish) : BC049398
Rattus
sp. (Rat) : BC060314
Bos
sp. (Cow) : BT021848
Canis
sp. (Dog) : ENSCAFT00000009166
Pongo
sp. (Orangutan) : ENSPPYT00000000649
Tetraodon
sp. (Tetraodon) : GSTENT00025766001
Takifugu
sp. (Fugu) : SINFRUT00000179286
Pan
sp. (Chimpanzee) : XM_001135530
Monodelphis
sp. (Opossum) : XM_001372077
Equus
sp. (Horse) : XM_001491236
HIX0019294
HIT000019368
(
AK094513
)
(Nucleoside diphosphate kinase 7 isoform b.)
genome : 169,101,775 - 169,337,184 (235,410)
query : 1 - 1,584 (1,584/1,584)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001564 : Nucleoside diphosphate kinase
IPR006602 : Uncharacterised domain DM10
GO :
0004550 : Molecular Function : nucleoside diphosphate kinase activity
0005524 : Molecular Function : ATP binding
0006165 : Biological Process : nucleoside diphosphate phosphorylation
0006183 : Biological Process : GTP biosynthetic process
0006228 : Biological Process : UTP biosynthetic process
0006241 : Biological Process : CTP biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.6667, cyto_plas 12.3333,
mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019294)
HIX0019294
HIT000496541
(
AK301917
)
(Nucleoside diphosphate kinase 7; NDK 7; NDP kinase 7; EC=2.7.4.6; nm23-H7;)
genome : 169,101,775 - 169,337,184 (235,410)
query : 1 - 1,678 (1,678/1,678)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001564 : Nucleoside diphosphate kinase
IPR006602 : Uncharacterised domain DM10
GO :
0004550 : Molecular Function : nucleoside diphosphate kinase activity
0005524 : Molecular Function : ATP binding
0006165 : Biological Process : nucleoside diphosphate phosphorylation
0006183 : Biological Process : GTP biosynthetic process
0006228 : Biological Process : UTP biosynthetic process
0006241 : Biological Process : CTP biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.6667, cyto 15.5, cyto_plas 10, nucl 8.5,
mito 2, pero 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019294)
HIX0019294
HIT000624676 (
ENST00000525440
)
(Nucleoside diphosphate kinase 7; NDK 7; NDP kinase 7; EC=2.7.4.6; nm23-H7;)
genome : 169,101,775 - 169,337,184 (235,410)
query : 1 - 1,678 (1,678/1,678)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.6667, cyto 15.5, cyto_plas 10, nucl 8.5,
mito 2, pero 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019294)
HIX0019294
HIT000423498
(
AK290701
)
(Nucleoside diphosphate kinase 7; NDK 7; NDP kinase 7; EC=2.7.4.6; nm23-H7;)
genome : 169,101,775 - 169,337,035 (235,261)
query : 1 - 1,466 (1,466/1,466)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.991;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001564 : Nucleoside diphosphate kinase
IPR006602 : Uncharacterised domain DM10
GO :
0004550 : Molecular Function : nucleoside diphosphate kinase activity
0005524 : Molecular Function : ATP binding
0006165 : Biological Process : nucleoside diphosphate phosphorylation
0006183 : Biological Process : GTP biosynthetic process
0006228 : Biological Process : UTP biosynthetic process
0006241 : Biological Process : CTP biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.6667, cyto_plas 10.3333,
nucl 5.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019294)
HIX0019294
HIT000587128 (
ENST00000483228
)
(Nucleoside diphosphate kinase 7 isoform b.)
genome : 169,138,759 - 169,279,309 (140,551)
query : 1 - 631 (631/631)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, extr 9, cyto_nucl 9, mito 7, nucl 4.5,
extr_plas 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019294)
HIX0019294
HIT000627694 (
ENST00000528517
)
(Nucleoside diphosphate kinase 7 isoform b.)
genome : 169,199,952 - 169,336,968 (137,017)
query : 1 - 1,087 (1,087/1,087)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.1667, cyto 17, cyto_plas 11, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019294)
HIX0019294
HIT000584496 (
ENST00000480478
)
(Nucleoside diphosphate kinase 7 isoform b.)
genome : 169,199,990 - 169,337,035 (137,046)
query : 1 - 768 (768/768)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 11.5, nucl 8.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019294)
HIX0019294
HIT000328984
(
AB209049
)
(Nucleoside diphosphate kinase 7 isoform b.)
genome : 169,252,460 - 169,337,010 (84,551)
query : 1 - 4,897 (4,897/4,897)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001564 : Nucleoside diphosphate kinase
IPR006602 : Uncharacterised domain DM10
GO :
0004550 : Molecular Function : nucleoside diphosphate kinase activity
0005524 : Molecular Function : ATP binding
0006165 : Biological Process : nucleoside diphosphate phosphorylation
0006183 : Biological Process : GTP biosynthetic process
0006228 : Biological Process : UTP biosynthetic process
0006241 : Biological Process : CTP biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 10.5, cysk 5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019294)
HIX0019294
HIT000624213 (
ENST00000524967
)
(Nucleoside diphosphate kinase 7 isoform b.)
genome : 169,253,059 - 169,337,010 (83,952)
query : 1 - 4,298 (4,298/4,298)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 10.5, cysk 5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019294)
HIX0019294
HIT000573995 (
ENST00000469474
)
(Nucleoside diphosphate kinase 7 isoform b.)
genome : 169,256,443 - 169,293,688 (37,246)
query : 1 - 867 (867/867)
7 exons
identity = 0.997
3'(1.000;1.000;0.958;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 4, pero 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019294)
HIX0019294
HIT000589406 (
ENST00000485609
)
(Nucleoside diphosphate kinase 7 isoform b.)
genome : 169,267,794 - 169,337,186 (69,393)
query : 1 - 719 (719/719)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, cysk 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019294)
HIX0019294
HIT000577331 (
ENST00000472984
)
(Nucleoside diphosphate kinase 7; NDK 7; NDP kinase 7; EC=2.7.4.6; nm23-R7;)
genome : 169,267,816 - 169,272,690 (4,875)
query : 1 - 494 (494/494)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 18, cyto_nucl 4.5, extr 4, cyto 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019294)
HIX0019294
HIT000594758 (
ENST00000491225
)
(Nucleoside diphosphate kinase 7 isoform b.)
genome : 169,267,843 - 169,337,035 (69,193)
query : 1 - 770 (770/770)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12, extr 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019294)
HIX0019294
HIT000626659 (
ENST00000527460
)
(Nucleoside diphosphate kinase 7 isoform a.)
genome : 169,272,338 - 169,337,020 (64,683)
query : 1 - 557 (557/557)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.4.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.6667, cyto 17, cyto_plas 10.6667,
nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019294)
HIX0160804
HIT000530015 (
ENST00000432081
)
(Hypothetical short protein.)
genome : 169,279,903 - 169,291,717 (11,815)
query : 1 - 368 (368/368)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 6.66667, cyto 5, mito 5,
cyto_pero 4.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160804)
HIX0001312
HIT000200475 (
NM_003666
)
(Golgin-45; Basic leucine zipper nuclear factor 1; JEM-1; p45 basic leucine-zipper nuclear factor;)
genome : 169,337,194 - 169,365,779 (28,586)
query : 1 - 2,315 (2,315/2,344)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.5, nucl 4, pero 4, extr 2,
mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001312)
HIX0001312
HIT000126036 (
ENST00000329281
)
(Golgin-45; Basic leucine zipper nuclear factor 1; JEM-1; p45 basic leucine-zipper nuclear factor;)
genome : 169,337,208 - 169,365,778 (28,571)
query : 1 - 2,300 (2,300/2,300)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.5, nucl 4, pero 4, extr 2,
mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001312)
HIX0001312
HIT000349088 (
ENST00000367808
)
(Golgin-45; Basic leucine zipper nuclear factor 1; JEM-1; p45 basic leucine-zipper nuclear factor;)
genome : 169,337,208 - 169,357,543 (20,336)
query : 1 - 2,749 (2,749/2,749)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.5, nucl 4, pero 4, extr 2,
mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001312)
HIX0001312
HIT000349087 (
ENST00000367807
)
(Golgin-45.)
genome : 169,337,208 - 169,346,621 (9,414)
query : 1 - 1,295 (1,295/1,295)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 10, nucl 7, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001312)
HIX0001312
HIT000518465 (
ENST00000420531
)
(Golgin-45.)
genome : 169,337,210 - 169,346,132 (8,923)
query : 1 - 795 (795/795)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10.5, nucl 8.5, mito 7, extr 4,
mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001312)
HIX0001312
HIT000221553
(
U79751
)
(Golgin-45; Basic leucine zipper nuclear factor 1; JEM-1; p45 basic leucine-zipper nuclear factor;)
genome : 169,337,228 - 169,357,539 (20,312)
query : 1 - 2,730 (2,730/2,730)
7 exons
identity = 0.996
5'(0.997;1.000;1.000;1.000;1.000;1.000;0.992)3'
coverage = 1.000
InterPro :
IPR013183 : DASH complex subunit Hsk3 like
IPR027095 : Golgin-45
GO :
0007030 : Biological Process : Golgi organization
0043001 : Biological Process : Golgi to plasma membrane protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.5, nucl 4, pero 4, extr 2,
mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001312)
HIX0001312
HIT000076334
(
AF288161
)
(Golgin-45.)
genome : 169,337,228 - 169,346,621 (9,394)
query : 1 - 1,274 (1,274/1,278)
3 exons
identity = 0.996
5'(0.992;1.000;0.998)3'
coverage = 0.997
InterPro :
IPR027095 : Golgin-45
GO :
0007030 : Biological Process : Golgi organization
0043001 : Biological Process : Golgi to plasma membrane protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 10, nucl 7, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001312)
HIX0001312
HIT000331313
(
AK223533
)
(Golgin-45; Basic leucine zipper nuclear factor 1; JEM-1; p45 basic leucine-zipper nuclear factor;)
genome : 169,337,255 - 169,356,441 (19,187)
query : 1 - 1,600 (1,600/1,600)
7 exons
identity = 0.999
5'(0.997;1.000;0.998;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013183 : DASH complex subunit Hsk3 like
IPR027095 : Golgin-45
GO :
0007030 : Biological Process : Golgi organization
0043001 : Biological Process : Golgi to plasma membrane protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.5, nucl 4, pero 4, extr 2,
mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001312)
HIX0001312
HIT000426017
(
AK307151
)
(Golgin-45.)
genome : 169,337,445 - 169,356,264 (18,820)
query : 1 - 849 (849/849)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;0.972;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013183 : DASH complex subunit Hsk3 like
IPR027095 : Golgin-45
GO :
0007030 : Biological Process : Golgi organization
0043001 : Biological Process : Golgi to plasma membrane protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001312)
HIX0001312
HIT000424522
(
AK291725
)
(Golgin-45; Basic leucine zipper nuclear factor 1; JEM-1; p45 basic leucine-zipper nuclear factor;)
genome : 169,337,451 - 169,356,901 (19,451)
query : 2 - 1,865 (1,864/1,865)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 0.999
InterPro :
IPR013183 : DASH complex subunit Hsk3 like
IPR027095 : Golgin-45
GO :
0007030 : Biological Process : Golgi organization
0043001 : Biological Process : Golgi to plasma membrane protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.5, nucl 4, pero 4, extr 2,
mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001312)
HIX0001312
HIT000038913
(
BC020716
)
Representative transcript
(Golgin-45; Basic leucine zipper nuclear factor 1; JEM-1; p45 basic leucine-zipper nuclear factor;)
genome : 169,337,468 - 169,365,777 (28,310)
query : 1 - 2,039 (2,039/2,070)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 0.999
InterPro :
IPR013183 : DASH complex subunit Hsk3 like
IPR027095 : Golgin-45
GO :
0007030 : Biological Process : Golgi organization
0043001 : Biological Process : Golgi to plasma membrane protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.5, nucl 4, pero 4, extr 2,
mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001312)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK029787
Danio
sp. (Zebrafish) : BC070020
Rattus
sp. (Rat) : BC079114
Bos
sp. (Cow) : BC105457
Gallus
sp. (Chicken) : BX929848
Macaca
sp. (Macaque) : DQ147942
Equus
sp. (Horse) : ENSECAT00000018469
Oryzias
sp. (Medaka) : ENSORLT00000004573
Pongo
sp. (Orangutan) : ENSPPYT00000000645
Pan
sp. (Chimpanzee) : ENSPTRT00000003003
Monodelphis
sp. (Opossum) : XM_001372174
Canis
sp. (Dog) : XM_547475
HIX0001312
HIT000524597 (
ENST00000426663
)
(Golgin-45.)
genome : 169,337,475 - 169,349,800 (12,326)
query : 1 - 926 (926/926)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 11, cyto_mito 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001312)
HIX0019044
HIT000012497
(
AK055883
)
(Conserved hypothetical protein.)
genome : 169,363,676 - 169,365,799 (2,124)
query : 1 - 2,127 (2,127/2,127)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 12, cyto_nucl 10.8333, cyto 5.5,
cyto_pero 3.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019044)
HIX0019044
HIT000349085 (
ENST00000367805
)
(Uncharacterised protein C1orf114 family protein.)
genome : 169,364,108 - 169,396,712 (32,605)
query : 1 - 1,914 (1,914/1,914)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019044)
HIX0019044
HIT000349086 (
ENST00000367806
)
(Uncharacterised protein C1orf114 family protein.)
genome : 169,364,108 - 169,396,655 (32,548)
query : 1 - 1,860 (1,860/1,860)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019044)
HIX0019044
HIT000208286 (
NM_021179
)
(Uncharacterised protein C1orf114 family protein.)
genome : 169,364,114 - 169,396,670 (32,557)
query : 1 - 1,866 (1,866/1,866)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019044)
HIX0019044
HIT000250078
(
AL049687
)
(Uncharacterised protein C1orf114 family protein.)
genome : 169,364,114 - 169,396,670 (32,557)
query : 1 - 1,866 (1,866/1,866)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026687 : Uncharacterised protein C1orf114
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019044)
HIX0019044
HIT000331134
(
AK223354
)
(Uncharacterised protein C1orf114 family protein.)
genome : 169,364,250 - 169,396,655 (32,406)
query : 1 - 1,718 (1,718/1,749)
6 exons
identity = 0.998
3'(1.000;1.000;1.000;0.997;1.000;0.992)5'
coverage = 1.000
InterPro :
IPR026687 : Uncharacterised protein C1orf114
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019044)
HIX0019044
HIT000023542
(
AK098712
)
(Uncharacterised protein C1orf114 family protein.)
genome : 169,364,251 - 169,396,655 (32,405)
query : 1 - 1,717 (1,717/1,717)
6 exons
identity = 0.998
3'(1.000;1.000;1.000;0.997;1.000;0.992)5'
coverage = 1.000
InterPro :
IPR026687 : Uncharacterised protein C1orf114
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019044)
HIX0019044
HIT000432464
(
AK313598
)
Representative transcript
(Uncharacterised protein C1orf114 family protein.)
genome : 169,364,285 - 169,429,907 (65,623)
query : 1 - 2,035 (2,035/2,035)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;0.998;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026687 : Uncharacterised protein C1orf114
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019044)
HIX0019044
HIT000644050 (
ENST00000545005
)
(Uncharacterised protein C1orf114 family protein.)
genome : 169,364,285 - 169,429,907 (65,623)
query : 1 - 2,035 (2,035/2,035)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019044)
HIX0019044
HIT000040091
(
BC026073
)
(Uncharacterised protein C1orf114 family protein.)
genome : 169,388,027 - 169,396,712 (8,686)
query : 1 - 1,650 (1,650/1,667)
4 exons
identity = 0.999
3'(0.997;0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026687 : Uncharacterised protein C1orf114
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019044)
HIX0019044
HIT000595090 (
ENST00000491570
)
(Uncharacterised protein C1orf114 family protein.)
genome : 169,388,024 - 169,396,712 (8,689)
query : 1 - 1,652 (1,652/1,652)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019044)
HIX0019044
HIT000087057
(
BC008388
)
(Uncharacterised protein C1orf114 family protein.)
genome : 169,390,600 - 169,396,698 (6,099)
query : 1 - 1,265 (1,265/1,310)
3 exons
identity = 0.998
3'(0.998;1.000;0.994)5'
coverage = 0.987
InterPro :
IPR026687 : Uncharacterised protein C1orf114
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019044)
HIX0019044
HIT000087058
(
BC008389
)
(Uncharacterised protein C1orf114 family protein.)
genome : 169,390,600 - 169,396,700 (6,101)
query : 1 - 1,247 (1,247/1,284)
3 exons
identity = 0.998
3'(0.998;1.000;0.994)5'
coverage = 0.991
InterPro :
IPR026687 : Uncharacterised protein C1orf114
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019044)
HIX0019044
HIT000554041 (
ENST00000456107
)
(Uncharacterised protein C1orf114 family protein.)
genome : 169,390,601 - 169,396,700 (6,100)
query : 1 - 1,246 (1,246/1,246)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 16.8333, cyto_golg 12.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019044)
HIX0019044
HIT000096719
(
BC041451
)
(Conserved hypothetical protein.)
genome : 169,411,876 - 169,429,690 (17,815)
query : 1 - 1,493 (1,493/1,566)
6 exons
identity = 0.997
3'(1.000;0.994;0.995;0.988;1.000;0.995)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, plas 11, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019044)
HIX0019044
HIT000543362 (
ENST00000445428
)
(Conserved hypothetical protein.)
genome : 169,411,876 - 169,429,690 (17,815)
query : 1 - 1,491 (1,491/1,491)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, plas 11, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019044)
HIX0019044
HIT000535791 (
ENST00000437857
)
(Hypothetical short protein.)
genome : 169,423,629 - 169,429,659 (6,031)
query : 1 - 427 (427/427)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019044)
HIX0199979
HIT000245219
(
AJ237724
)
Representative transcript
(Thiamine transporter 1; ThTr-1; ThTr1; Solute carrier family 19 member 2; Thiamine carrier 1; TC1;)
genome : 169,432,465 - 169,455,014 (22,550)
query : 1 - 4,126 (4,126/4,126)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002666 : Reduced folate carrier
GO :
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199979)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK044825
Rattus
sp. (Rat) : BC099811
Canis
sp. (Dog) : ENSCAFT00000024176
Danio
sp. (Zebrafish) : ENSDART00000083305
Equus
sp. (Horse) : ENSECAT00000016840
Oryzias
sp. (Medaka) : ENSORLT00000014805
Pongo
sp. (Orangutan) : ENSPPYT00000000643
Tetraodon
sp. (Tetraodon) : GSTENT00027067001
Takifugu
sp. (Fugu) : SINFRUT00000146718
Monodelphis
sp. (Opossum) : XM_001364588
Gallus
sp. (Chicken) : XM_425529
Pan
sp. (Chimpanzee) : XM_524958
Bos
sp. (Cow) : XM_612064
HIX0199979
HIT000203540 (
NM_006996
)
(Thiamine transporter 1; ThTr-1; ThTr1; Solute carrier family 19 member 2; Thiamine carrier 1; TC1;)
genome : 169,433,150 - 169,455,208 (22,059)
query : 1 - 3,635 (3,635/3,655)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199979)
HIX0199979
HIT000104682 (
ENST00000236137
)
(Thiamine transporter 1; ThTr-1; ThTr1; Solute carrier family 19 member 2; Thiamine carrier 1; TC1;)
genome : 169,433,147 - 169,455,241 (22,095)
query : 1 - 3,671 (3,671/3,671)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199979)
HIX0199979
HIT000349084 (
ENST00000367804
)
(Thiamine transporter 2; ThTr-2; ThTr2; Solute carrier family 19 member 3;)
genome : 169,433,147 - 169,455,241 (22,095)
query : 1 - 3,068 (3,068/3,068)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199979)
HIX0199979
HIT000349082 (
ENST00000367802
)
(Thiamine transporter 1; ThTr-1; ThTr1; Solute carrier family 19 member 2; Thiamine carrier 1; TC1;)
genome : 169,433,147 - 169,455,146 (22,000)
query : 1 - 3,462 (3,462/3,462)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199979)
HIX0199979
HIT000072057
(
AF160812
)
(Thiamine transporter 1; ThTr-1; ThTr1; Solute carrier family 19 member 2; Thiamine carrier 1; TC1;)
genome : 169,433,167 - 169,455,100 (21,934)
query : 1 - 3,510 (3,510/3,530)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002666 : Reduced folate carrier
GO :
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199979)
HIX0199979
HIT000071847
(
AF153330
)
(Thiamine transporter 1; ThTr-1; ThTr1; Solute carrier family 19 member 2; Thiamine carrier 1; TC1;)
genome : 169,433,167 - 169,455,241 (22,075)
query : 1 - 3,651 (3,651/3,668)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002666 : Reduced folate carrier
GO :
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199979)
HIX0199979
HIT000038356
(
BC018514
)
(Thiamine transporter 2; ThTr-2; ThTr2; Solute carrier family 19 member 3;)
genome : 169,433,169 - 169,455,169 (22,001)
query : 1 - 2,974 (2,974/2,990)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002666 : Reduced folate carrier
GO :
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199979)
HIX0199979
HIT000071046
(
AF135488
)
(Thiamine transporter 1; ThTr-1; ThTr1; Solute carrier family 19 member 2; Thiamine carrier 1; TC1;)
genome : 169,433,169 - 169,455,164 (21,996)
query : 1 - 3,572 (3,572/3,572)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002666 : Reduced folate carrier
GO :
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199979)
HIX0199979
HIT000329475
(
AB209540
)
(Thiamine transporter 2; ThTr-2; ThTr2; Solute carrier family 19 member 3;)
genome : 169,433,170 - 169,438,435 (5,266)
query : 1 - 3,130 (3,130/3,130)
2 exons
identity = 0.998
3'(1.000;0.996)5'
coverage = 1.000
InterPro :
IPR002666 : Reduced folate carrier
GO :
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, E.R._mito 5.5, E.R. 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199979)
HIX0199979
HIT000500078
(
AK316465
)
(Thiamine transporter 1; ThTr-1; ThTr1; Solute carrier family 19 member 2; Thiamine carrier 1; TC1;)
genome : 169,434,753 - 169,446,877 (12,125)
query : 1 - 1,506 (1,506/1,506)
5 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002666 : Reduced folate carrier
GO :
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199979)
HIX0199979
HIT000498645
(
AK304021
)
(Thiamine transporter 1; ThTr-1; ThTr1; Solute carrier family 19 member 2; Thiamine carrier 1; TC1;)
genome : 169,435,072 - 169,454,953 (19,882)
query : 1 - 1,458 (1,458/1,458)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002666 : Reduced folate carrier
GO :
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, E.R. 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199979)
HIX0199979
HIT000432645
(
AK313779
)
(Thiamine transporter 1; ThTr-1; ThTr1; Solute carrier family 19 member 2; Thiamine carrier 1; TC1;)
genome : 169,435,087 - 169,455,180 (20,094)
query : 1 - 1,670 (1,670/1,670)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002666 : Reduced folate carrier
GO :
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199979)
HIX0199979
HIT000075807
(
AF272359
)
(Thiamine transporter 1; ThTr-1; ThTr1; Solute carrier family 19 member 2; Thiamine carrier 1; TC1;)
genome : 169,435,087 - 169,455,004 (19,918)
query : 1 - 1,494 (1,494/1,494)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002666 : Reduced folate carrier
GO :
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199979)
HIX0161394
HIT000550406 (
ENST00000452472
)
(Non-protein coding transcript.)
genome : 169,443,298 - 169,443,397 (100)
query : 1 - 100 (100/100)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161394)
HIX0001315
HIT000018479
(
AK093612
)
Representative transcript
(Conserved hypothetical protein.)
genome : 169,447,791 - 169,450,182 (2,392)
query : 1 - 2,391 (2,391/2,391)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 9, cyto 9, cyto_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001315)
HIX0028567
HIT000072067
(
AF161337
)
Representative transcript
(Conserved hypothetical protein.)
genome : 169,455,380 - 169,456,846 (1,467)
query : 2 - 1,466 (1,465/1,466)
1 exon
identity = 0.989
5'(0.989)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 4, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028567)
HIX0028567
HIT000475591 (
ENST00000392097
)
(Conserved hypothetical protein.)
genome : 169,455,380 - 169,456,846 (1,467)
query : 1 - 1,463 (1,463/1,463)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028567)
HIX0028567
HIT000098002
(
BC045168
)
(Conserved hypothetical protein.)
genome : 169,455,430 - 169,459,264 (3,835)
query : 1 - 3,835 (3,835/3,922)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028567)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XM_001092960
HIX0028626
HIT000197179 (
NM_000130
)
(Coagulation factor V; Activated protein C cofactor; Proaccelerin, labile factor; Contains: Coagulation factor V heavy chain; Contains: Coagulation factor V light chain; Precursor;)
genome : 169,481,192 - 169,555,769 (74,578)
query : 1 - 9,179 (9,179/9,179)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 6, E.R. 6, mito 2, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028626)
HIX0028626
HIT000349076 (
ENST00000367796
)
(Coagulation factor V; Activated protein C cofactor; Proaccelerin, labile factor; Contains: Coagulation factor V heavy chain; Contains: Coagulation factor V light chain; Precursor;)
genome : 169,483,404 - 169,555,826 (72,423)
query : 1 - 7,039 (7,039/7,039)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 6, E.R. 6, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028626)
HIX0028626
HIT000349077 (
ENST00000367797
)
(Coagulation factor V; Activated protein C cofactor; Proaccelerin, labile factor; Contains: Coagulation factor V heavy chain; Contains: Coagulation factor V light chain; Precursor;)
genome : 169,483,404 - 169,555,826 (72,423)
query : 1 - 7,024 (7,024/7,024)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 6, E.R. 6, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028626)
HIX0028626
HIT000598843 (
ENST00000495481
)
(Discoidin, CUB and LCCL domain-containing protein 2 precursor.)
genome : 169,483,404 - 169,484,983 (1,580)
query : 1 - 596 (596/596)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 14, nucl 3.5, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028626)
HIX0028626
HIT000385209
(
AK226079
)
Representative transcript
(Coagulation factor V; Activated protein C cofactor; Proaccelerin, labile factor; Contains: Coagulation factor V heavy chain; Contains: Coagulation factor V light chain; Precursor;)
genome : 169,483,406 - 169,555,687 (72,282)
query : 1 - 6,883 (6,883/6,883)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000421 : Coagulation factor 5/8 C-terminal type domain
IPR002355 : Multicopper oxidase, copper-binding site
IPR008972 : Cupredoxin
IPR008979 : Galactose-binding domain-like
IPR011707 : Multicopper oxidase, type 3
GO :
0005507 : Molecular Function : copper ion binding
0007155 : Biological Process : cell adhesion
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 6, E.R. 6, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028626)
Ortholog candidate ( ->
Evola
)
Takifugu
sp. (Fugu) : AF465280
Mus
sp. (Mouse) : AK137537
Rattus
sp. (Rat) : AY321333
Danio
sp. (Zebrafish) : BC108018
Canis
sp. (Dog) : ENSCAFT00000024154
Oryzias
sp. (Medaka) : ENSORLT00000016805
Pongo
sp. (Orangutan) : ENSPPYT00000000642
Pan
sp. (Chimpanzee) : ENSPTRT00000046325
Tetraodon
sp. (Tetraodon) : GSTENT00021786001
Bos
sp. (Cow) : M81440
Macaca
sp. (Macaque) : XM_001093072
Monodelphis
sp. (Opossum) : XM_001372225
Equus
sp. (Horse) : XM_001915666
HIX0028626
HIT000194503
(
M16967
)
(Coagulation factor V; Activated protein C cofactor; Proaccelerin, labile factor; Contains: Coagulation factor V heavy chain; Contains: Coagulation factor V light chain; Precursor;)
genome : 169,483,407 - 169,555,706 (72,300)
query : 9 - 6,909 (6,901/6,909)
25 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995;1.000;1.000;0.997;1.000;
1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000421 : Coagulation factor 5/8 C-terminal type domain
IPR002355 : Multicopper oxidase, copper-binding site
IPR008972 : Cupredoxin
IPR008979 : Galactose-binding domain-like
IPR011707 : Multicopper oxidase, type 3
GO :
0005507 : Molecular Function : copper ion binding
0007155 : Biological Process : cell adhesion
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 6, E.R. 6, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028626)
HIX0028626
HIT000194331
(
M14335
)
(Coagulation factor V; Activated protein C cofactor; Proaccelerin, labile factor; Contains: Coagulation factor V heavy chain; Contains: Coagulation factor V light chain; Precursor;)
genome : 169,483,409 - 169,555,687 (72,279)
query : 14 - 6,893 (6,880/6,893)
25 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995;1.000;1.000;0.998;1.000;
1.000;0.995;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR000421 : Coagulation factor 5/8 C-terminal type domain
IPR002355 : Multicopper oxidase, copper-binding site
IPR008972 : Cupredoxin
IPR008979 : Galactose-binding domain-like
IPR011707 : Multicopper oxidase, type 3
GO :
0005507 : Molecular Function : copper ion binding
0007155 : Biological Process : cell adhesion
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 6, E.R. 6, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028626)
HIX0028626
HIT000246728
(
AJ297255
)
(Coagulation factor V; Activated protein C cofactor; Proaccelerin, labile factor; Contains: Coagulation factor V heavy chain; Contains: Coagulation factor V light chain; Precursor;)
genome : 169,509,532 - 169,512,352 (2,821)
query : 1 - 2,821 (2,821/2,821)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
InterPro :
IPR009271 : Coagulation factor V, LSPD
GO :
0007596 : Biological Process : blood coagulation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028626)
HIX0028626
HIT000424410
(
AK291613
)
(Venom prothrombin activator omicarin-C non-catalytic subunit; vPA; Venom coagulation factor Va-like protein; Contains: Omicarin-C non-catalytic subunit heavy chain; Contains: Omicarin-C non-catalytic subunit light chain; Precursor;)
genome : 169,511,239 - 169,555,719 (44,481)
query : 1 - 3,184 (3,184/3,184)
13 exons
identity = 0.999
3'(0.999;1.000;1.000;0.991;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008972 : Cupredoxin
IPR011707 : Multicopper oxidase, type 3
GO :
0005507 : Molecular Function : copper ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, E.R. 6, nucl 5, mito 2, pero 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028626)
HIX0028626
HIT000196856
(
M94010
)
(Coagulation factor V; Activated protein C cofactor; Proaccelerin, labile factor; Contains: Coagulation factor V heavy chain; Contains: Coagulation factor V light chain; Precursor;)
genome : 169,511,529 - 169,512,236 (708)
query : 1 - 708 (708/708)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13.5, cyto 10.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028626)
HIX0028626
HIT000246727
(
AJ297254
)
(Coagulation factor V; Activated protein C cofactor; Proaccelerin, labile factor; Contains: Coagulation factor V heavy chain; Contains: Coagulation factor V light chain; Precursor;)
genome : 169,515,680 - 169,515,830 (151)
query : 1 - 151 (151/151)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
InterPro :
IPR008972 : Cupredoxin
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 13.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028626)
HIX0028626
HIT000495093
(
AK300469
)
(Coagulation factor V; Activated protein C cofactor; Proaccelerin, labile factor; Contains: Coagulation factor V heavy chain; Contains: Coagulation factor V light chain; Precursor;)
genome : 169,515,727 - 169,555,719 (39,993)
query : 1 - 1,714 (1,714/1,714)
10 exons
identity = 0.998
3'(1.000;0.986;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008972 : Cupredoxin
IPR011707 : Multicopper oxidase, type 3
IPR027150 : Ceruloplasmin
GO :
0004322 : Molecular Function : ferroxidase activity
0005507 : Molecular Function : copper ion binding
0006825 : Biological Process : copper ion transport
0006879 : Biological Process : cellular iron ion homeostasis
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 12, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028626)
HIX0028626
HIT000645126 (
ENST00000546081
)
(Coagulation factor V; Activated protein C cofactor; Proaccelerin, labile factor; Contains: Coagulation factor V heavy chain; Contains: Coagulation factor V light chain; Precursor;)
genome : 169,515,727 - 169,555,719 (39,993)
query : 1 - 1,714 (1,714/1,714)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 12, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028626)
HIX0001316
HIT000040420
(
BC028067
)
(P-selectin precursor.)
genome : 169,558,089 - 169,588,457 (30,369)
query : 1 - 3,086 (3,086/3,160)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;0.995;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR001304 : C-type lectin
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto_nucl 2.33333, cyto_mito 2.33333, cyto 2,
nucl 1.5, mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001316)
HIX0001316
HIT000199874 (
NM_003005
)
(P-selectin; CD62 antigen-like family member P; Granule membrane protein 140; GMP-140; Leukocyte-endothelial cell adhesion molecule 3; LECAM3; Platelet activation dependent granule-external membrane protein; PADGEM; AltName: CD_antigen=CD62P; Precursor;)
genome : 169,558,089 - 169,599,377 (41,289)
query : 1 - 3,170 (3,170/3,185)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 10, extr_plas 8, plas 7, extr 7, nucl 2, cyto 2,
mito 2, cyto_nucl 2, cyto_mito 2, mito_nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001316)
HIX0001316
HIT000263090
(
BC068533
)
Representative transcript
(P-selectin; CD62 antigen-like family member P; Granule membrane protein 140; GMP-140; Leukocyte-endothelial cell adhesion molecule 3; LECAM3; Platelet activation dependent granule-external membrane protein; PADGEM; AltName: CD_antigen=CD62P; Precursor;)
genome : 169,558,089 - 169,599,363 (41,275)
query : 1 - 3,153 (3,153/3,168)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;0.991;1.000;1.000;0.995;
0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR001304 : C-type lectin
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 10, extr_plas 8, plas 7, extr 7, nucl 2, cyto 2,
mito 2, cyto_nucl 2, cyto_mito 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001316)
Ortholog candidate ( ->
Evola
)
Equus
sp. (Horse) : AY509881
Rattus
sp. (Rat) : BC101919
Bos
sp. (Cow) : BC149300
Oryzias
sp. (Medaka) : ENSORLT00000020888
Pongo
sp. (Orangutan) : ENSPPYT00000000641
Mus
sp. (Mouse) : M72332
Canis
sp. (Dog) : M88170
Takifugu
sp. (Fugu) : SINFRUT00000181053
Macaca
sp. (Macaque) : XM_001094728
Pan
sp. (Chimpanzee) : XM_001137240
Danio
sp. (Zebrafish) : XM_001336788
Monodelphis
sp. (Opossum) : XM_001372248
Gallus
sp. (Chicken) : XM_422207
HIX0001316
HIT000524640 (
ENST00000426706
)
(P-selectin precursor.)
genome : 169,558,087 - 169,588,457 (30,371)
query : 1 - 3,088 (3,088/3,088)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto_nucl 2.33333, cyto_mito 2.33333, cyto 2,
nucl 1.5, mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001316)
HIX0001316
HIT000349071 (
ENST00000367791
)
(P-selectin precursor.)
genome : 169,558,090 - 169,599,377 (41,288)
query : 1 - 2,611 (2,611/2,611)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 13, extr_plas 8, plas 7, extr 7, mito_pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001316)
HIX0001316
HIT000349072 (
ENST00000367792
)
(P-selectin; CD62 antigen-like family member P; Granule membrane protein 140; GMP-140; Leukocyte-endothelial cell adhesion molecule 3; LECAM3; Platelet activation dependent granule-external membrane protein; PADGEM; AltName: CD_antigen=CD62P; Precursor;)
genome : 169,558,090 - 169,599,377 (41,288)
query : 1 - 2,617 (2,617/2,617)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 13, extr_plas 8, plas 7, extr 7, mito_pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001316)
HIX0001316
HIT000349073 (
ENST00000367793
)
(P-selectin precursor.)
genome : 169,558,090 - 169,599,377 (41,288)
query : 1 - 2,983 (2,983/2,983)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 11, extr_plas 8, plas 7, extr 7, cyto 2, mito 2,
cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001316)
HIX0001316
HIT000349074 (
ENST00000367794
)
(P-selectin precursor.)
genome : 169,558,090 - 169,599,377 (41,288)
query : 1 - 2,983 (2,983/2,983)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 12, extr_plas 8, plas 7, extr 7, cyto_pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001316)
HIX0001316
HIT000108986 (
ENST00000263686
)
(P-selectin; CD62 antigen-like family member P; Granule membrane protein 140; GMP-140; Leukocyte-endothelial cell adhesion molecule 3; LECAM3; Platelet activation dependent granule-external membrane protein; PADGEM; AltName: CD_antigen=CD62P; Precursor;)
genome : 169,558,090 - 169,599,350 (41,261)
query : 1 - 3,142 (3,142/3,142)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 10, extr_plas 8, plas 7, extr 7, nucl 2, cyto 2,
mito 2, cyto_nucl 2, cyto_mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001316)
HIX0001316
HIT000194990
(
M25322
)
(P-selectin; CD62 antigen-like family member P; Granule membrane protein 140; GMP-140; Leukocyte-endothelial cell adhesion molecule 3; LECAM3; Platelet activation dependent granule-external membrane protein; PADGEM; AltName: CD_antigen=CD62P; Precursor;)
genome : 169,558,090 - 169,599,350 (41,261)
query : 1 - 3,142 (3,142/3,142)
17 exons
identity = 0.998
3'(1.000;1.000;1.000;0.992;1.000;0.995;0.984;
1.000;1.000;1.000;0.995;0.995;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR001304 : C-type lectin
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 11, extr_plas 8, plas 7, extr 7, nucl 2, cyto 2,
cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001316)
HIX0001316
HIT000570831 (
ENST00000466167
)
(P-selectin; CD62 antigen-like family member P; Granule membrane protein 140; GMP-140; Leukocyte-endothelial cell adhesion molecule 3; LECAM3; Platelet activation dependent granule-external membrane protein; PADGEM; AltName: CD_antigen=CD62P; Precursor;)
genome : 169,558,315 - 169,560,808 (2,494)
query : 1 - 690 (690/690)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 12, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001316)
HIX0001316
HIT000349066 (
ENST00000367786
)
(P-selectin precursor.)
genome : 169,558,752 - 169,588,458 (29,707)
query : 5 - 2,402 (2,398/2,402)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 12, extr_plas 8, plas 7, extr 7, cyto_pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001316)
HIX0001316
HIT000349068 (
ENST00000367788
)
(P-selectin precursor.)
genome : 169,559,385 - 169,599,431 (40,047)
query : 1 - 2,427 (2,427/2,427)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 11, extr_plas 8, plas 7, extr 7, cyto 2, mito 2,
cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001316)
HIX0001316
HIT000556533 (
ENST00000458599
)
(P-selectin; CD62 antigen-like family member P; Granule membrane protein 140; GMP-140; Leukocyte-endothelial cell adhesion molecule 3; LECAM3; Platelet activation dependent granule-external membrane protein; PADGEM; AltName: CD_antigen=CD62P; Precursor;)
genome : 169,559,385 - 169,588,458 (29,074)
query : 6 - 1,945 (1,940/1,945)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 13, extr_plas 8, plas 7, extr 7, mito_pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001316)
HIX0001316
HIT000431750
(
AK312884
)
(P-selectin; CD62 antigen-like family member P; Granule membrane protein 140; GMP-140; Leukocyte-endothelial cell adhesion molecule 3; LECAM3; Platelet activation dependent granule-external membrane protein; PADGEM; AltName: CD_antigen=CD62P; Precursor;)
genome : 169,559,386 - 169,599,359 (39,974)
query : 1 - 2,540 (2,540/2,540)
16 exons
identity = 0.999
3'(0.982;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.997;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR001304 : C-type lectin
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 10, extr_plas 8, plas 7, extr 7, nucl 2, cyto 2,
mito 2, cyto_nucl 2, cyto_mito 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001316)
HIX0001316
HIT000349075 (
ENST00000367795
)
(L-selectin; CD62 antigen-like family member L; Leukocyte adhesion molecule 1; LAM-1; Leukocyte-endothelial cell adhesion molecule 1; LECAM1; Lymph node homing receptor; Lymphocyte antigen 22; Ly-22; Lymphocyte surface MEL-14 antigen; AltName: CD_antigen=CD62L; Precursor;)
genome : 169,572,264 - 169,588,458 (16,195)
query : 15 - 1,345 (1,331/1,345)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto_nucl 2.5, nucl 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001316)
HIX0001316
HIT000253278
(
AY367063
)
(P-selectin; CD62 antigen-like family member P; Granule membrane protein 140; GMP-140; Leukocyte-endothelial cell adhesion molecule 3; LECAM3; Platelet activation dependent granule-external membrane protein; PADGEM; AltName: CD_antigen=CD62P; Precursor;)
genome : 169,582,179 - 169,586,400 (4,222)
query : 1 - 417 (417/417)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR001304 : C-type lectin
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 7.5, nucl 6, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001316)
HIX0001319
HIT000046971
(
AK127098
)
(Uncharacterized protein C1orf112;)
genome : 169,631,245 - 169,822,226 (190,982)
query : 1 - 3,849 (3,849/3,849)
29 exons
identity = 0.998
5'(1.000;1.000;1.000;0.975;1.000;0.980;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR027902 : Protein of unknown function DUF4487
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, E.R. 6, extr_plas 6, cyto 5.5, cyto_mito 3.5,
E.R._golg 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000601516 (
ENST00000498289
)
(Uncharacterized protein C1orf112;)
genome : 169,631,245 - 169,822,226 (190,982)
query : 1 - 3,849 (3,849/3,849)
29 exons
identity = 0.999
5'(1.000;1.000;1.000;0.975;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, E.R. 6, extr_plas 6, cyto 5.5, cyto_mito 3.5,
E.R._golg 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0199982
HIT000321540
(
X16150
)
(L-selectin; CD62 antigen-like family member L; Leukocyte adhesion molecule 1; LAM-1; Leukocyte surface antigen Leu-8; Leukocyte-endothelial cell adhesion molecule 1; LECAM1; Lymph node homing receptor; TQ1; gp90-MEL; AltName: CD_antigen=CD62L; Precursor;)
genome : 169,659,808 - 169,680,726 (20,919)
query : 5 - 2,321 (2,317/2,330)
9 exons
identity = 0.994
3'(0.992;1.000;1.000;1.000;0.984;1.000;0.997;
1.000;1.000)5'
coverage = 0.994
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR001304 : C-type lectin
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, E.R. 3, nucl 2, cyto 2, cyto_nucl 2, lyso 2,
E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199982)
HIX0199982
HIT000194983
(
M25280
)
(L-selectin; CD62 antigen-like family member L; Leukocyte adhesion molecule 1; LAM-1; Leukocyte surface antigen Leu-8; Leukocyte-endothelial cell adhesion molecule 1; LECAM1; Lymph node homing receptor; TQ1; gp90-MEL; AltName: CD_antigen=CD62L; Precursor;)
genome : 169,659,812 - 169,680,754 (20,943)
query : 2 - 2,347 (2,346/2,354)
9 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;0.992)5'
coverage = 0.997
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR001304 : C-type lectin
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, E.R. 3, nucl 2, cyto 2, cyto_nucl 2, lyso 2,
E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199982)
HIX0199982
HIT000197678 (
NM_000655
)
(L-selectin; CD62 antigen-like family member L; Leukocyte adhesion molecule 1; LAM-1; Leukocyte surface antigen Leu-8; Leukocyte-endothelial cell adhesion molecule 1; LECAM1; Lymph node homing receptor; TQ1; gp90-MEL; AltName: CD_antigen=CD62L; Precursor;)
genome : 169,659,806 - 169,680,843 (21,038)
query : 1 - 2,442 (2,442/2,442)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, E.R. 3, nucl 2, cyto 2, cyto_nucl 2, lyso 2,
E.R._mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199982)
HIX0199982
HIT000657940 (
NR_029467
)
(L-selectin; CD62 antigen-like family member L; Leukocyte adhesion molecule 1; LAM-1; Leukocyte-endothelial cell adhesion molecule 1; LECAM1; Lymph node homing receptor; AltName: CD_antigen=CD62L; Precursor;)
genome : 169,659,806 - 169,677,997 (18,192)
query : 1 - 2,206 (2,206/2,206)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, cyto 3, nucl 2, mito 1.5, mito_pero 1.5,
cyto_golg 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199982)
HIX0199982
HIT000104684 (
ENST00000236147
)
(L-selectin; CD62 antigen-like family member L; Leukocyte adhesion molecule 1; LAM-1; Leukocyte surface antigen Leu-8; Leukocyte-endothelial cell adhesion molecule 1; LECAM1; Lymph node homing receptor; TQ1; gp90-MEL; AltName: CD_antigen=CD62L; Precursor;)
genome : 169,659,808 - 169,680,839 (21,032)
query : 1 - 2,436 (2,436/2,436)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, E.R. 3, nucl 2, cyto 2, cyto_nucl 2, lyso 2,
E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199982)
HIX0199982
HIT000321615
(
X17519
)
(L-selectin; CD62 antigen-like family member L; Leukocyte adhesion molecule 1; LAM-1; Leukocyte surface antigen Leu-8; Leukocyte-endothelial cell adhesion molecule 1; LECAM1; Lymph node homing receptor; TQ1; gp90-MEL; AltName: CD_antigen=CD62L; Precursor;)
genome : 169,659,810 - 169,680,727 (20,918)
query : 1 - 2,323 (2,323/2,323)
9 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.995;1.000;0.997;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR001304 : C-type lectin
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, E.R. 3, nucl 2, cyto 2, cyto_nucl 2, lyso 2,
E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199982)
HIX0199982
HIT000321536
(
X16070
)
(L-selectin; CD62 antigen-like family member L; Leukocyte adhesion molecule 1; LAM-1; Leukocyte surface antigen Leu-8; Leukocyte-endothelial cell adhesion molecule 1; LECAM1; Lymph node homing receptor; TQ1; gp90-MEL; AltName: CD_antigen=CD62L; Precursor;)
genome : 169,659,936 - 169,680,744 (20,809)
query : 25 - 2,235 (2,211/2,259)
9 exons
identity = 0.993
3'(0.994;1.000;1.000;1.000;0.989;0.981;0.992;
0.988;0.991)5'
coverage = 0.979
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR001304 : C-type lectin
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, extr 2, nucl 2, cyto 2, cyto_nucl 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199982)
HIX0199982
HIT000384843
(
AK225713
)
(L-selectin; CD62 antigen-like family member L; Leukocyte adhesion molecule 1; LAM-1; Leukocyte surface antigen Leu-8; Leukocyte-endothelial cell adhesion molecule 1; LECAM1; Lymph node homing receptor; TQ1; gp90-MEL; AltName: CD_antigen=CD62L; Precursor;)
genome : 169,660,166 - 169,680,754 (20,589)
query : 1 - 1,993 (1,993/1,993)
9 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
0.988;1.000)5'
coverage = 1.000
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR001304 : C-type lectin
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, extr 2, nucl 2, cyto 2, cyto_nucl 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199982)
HIX0199982
HIT000493329
(
AK298705
)
(L-selectin; CD62 antigen-like family member L; Leukocyte adhesion molecule 1; LAM-1; Leukocyte-endothelial cell adhesion molecule 1; LECAM1; Lymph node homing receptor; AltName: CD_antigen=CD62L; Precursor;)
genome : 169,660,452 - 169,677,992 (17,541)
query : 1 - 1,555 (1,555/1,555)
7 exons
identity = 0.998
3'(1.000;1.000;1.000;0.995;0.995;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR001304 : C-type lectin
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, cyto 3, nucl 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199982)
HIX0199982
HIT000245910
(
AJ246000
)
Representative transcript
(L-selectin; CD62 antigen-like family member L; Leukocyte adhesion molecule 1; LAM-1; Leukocyte surface antigen Leu-8; Leukocyte-endothelial cell adhesion molecule 1; LECAM1; Lymph node homing receptor; TQ1; gp90-MEL; AltName: CD_antigen=CD62L; Precursor;)
genome : 169,660,550 - 169,680,714 (20,165)
query : 1 - 1,569 (1,569/1,569)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR001304 : C-type lectin
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, E.R. 3, nucl 2, cyto 2, cyto_nucl 2, lyso 2,
E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199982)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK157273
Bos
sp. (Cow) : BC149526
Gallus
sp. (Chicken) : ENSGALT00000005376
Rattus
sp. (Rat) : S79523
Takifugu
sp. (Fugu) : SINFRUT00000181053
Pan
sp. (Chimpanzee) : U73728
Pongo
sp. (Orangutan) : U73729
Macaca
sp. (Macaque) : U73730
Monodelphis
sp. (Opossum) : XM_001372299
Equus
sp. (Horse) : XM_001491555
Canis
sp. (Dog) : XM_537201
Danio
sp. (Zebrafish) : XM_681324
HIX0199982
HIT000600575 (
ENST00000497295
)
(Hypothetical short protein.)
genome : 169,660,822 - 169,672,470 (11,649)
query : 1 - 216 (216/216)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199982)
HIX0199982
HIT000038942
(
BC020758
)
(L-selectin; CD62 antigen-like family member L; Leukocyte adhesion molecule 1; LAM-1; Leukocyte surface antigen Leu-8; Leukocyte-endothelial cell adhesion molecule 1; LECAM1; Lymph node homing receptor; TQ1; gp90-MEL; AltName: CD_antigen=CD62L; Precursor;)
genome : 169,670,665 - 169,680,740 (10,076)
query : 1 - 1,218 (1,218/1,249)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR001304 : C-type lectin
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, E.R. 3, nucl 2, cyto 2, cyto_nucl 2, lyso 2,
E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199982)
HIX0199982
HIT000567917 (
ENST00000463108
)
(L-selectin; CD62 antigen-like family member L; Leukocyte adhesion molecule 1; LAM-1; Leukocyte surface antigen Leu-8; Leukocyte-endothelial cell adhesion molecule 1; LECAM1; Lymph node homing receptor; TQ1; gp90-MEL; AltName: CD_antigen=CD62L; Precursor;)
genome : 169,670,649 - 169,680,839 (10,191)
query : 1 - 1,333 (1,333/1,346)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, E.R. 3, nucl 2, cyto 2, cyto_nucl 2, lyso 2,
E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199982)
HIX0199982
HIT000431539
(
AK312673
)
(L-selectin; CD62 antigen-like family member L; Leukocyte adhesion molecule 1; LAM-1; Leukocyte surface antigen Leu-8; Leukocyte-endothelial cell adhesion molecule 1; LECAM1; Lymph node homing receptor; TQ1; gp90-MEL; AltName: CD_antigen=CD62L; Precursor;)
genome : 169,670,700 - 169,680,754 (10,055)
query : 1 - 1,197 (1,197/1,234)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.970
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR001304 : C-type lectin
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, E.R. 3, nucl 2, cyto 2, cyto_nucl 2, lyso 2,
E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199982)
HIX0199982
HIT000253276
(
AY367061
)
(L-selectin; CD62 antigen-like family member L; Leukocyte adhesion molecule 1; LAM-1; Leukocyte surface antigen Leu-8; Leukocyte-endothelial cell adhesion molecule 1; LECAM1; Lymph node homing receptor; TQ1; gp90-MEL; AltName: CD_antigen=CD62L; Precursor;)
genome : 169,670,717 - 169,677,597 (6,881)
query : 1 - 633 (633/633)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, cyto 6, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199982)
HIX0199982
HIT000565568 (
ENST00000460650
)
(L-selectin; CD62 antigen-like family member L; Leukocyte adhesion molecule 1; LAM-1; Leukocyte surface antigen Leu-8; Leukocyte-endothelial cell adhesion molecule 1; LECAM1; Lymph node homing receptor; TQ1; gp90-MEL; AltName: CD_antigen=CD62L; Precursor;)
genome : 169,672,246 - 169,673,894 (1,649)
query : 1 - 522 (522/522)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, extr 11, cyto 10, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199982)
HIX0199982
HIT000583707 (
ENST00000479657
)
(L-selectin; CD62 antigen-like family member L; Leukocyte adhesion molecule 1; LAM-1; Leukocyte surface antigen Leu-8; Leukocyte-endothelial cell adhesion molecule 1; LECAM1; Lymph node homing receptor; TQ1; gp90-MEL; AltName: CD_antigen=CD62L; Precursor;)
genome : 169,672,458 - 169,677,781 (5,324)
query : 1 - 701 (701/701)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 6, cyto 3.5, cyto_nucl 3.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199982)
HIX0199982
HIT000570998 (
ENST00000466340
)
(L-selectin; CD62 antigen-like family member L; Leukocyte adhesion molecule 1; LAM-1; Leukocyte surface antigen Leu-8; Leukocyte-endothelial cell adhesion molecule 1; LECAM1; Lymph node homing receptor; TQ1; gp90-MEL; AltName: CD_antigen=CD62L; Precursor;)
genome : 169,673,868 - 169,679,673 (5,806)
query : 1 - 619 (619/619)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 8.5, mito 7, cyto 5.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199982)
HIX0028687
HIT000435414
(
BC142711
)
Representative transcript
(E-selectin; CD62 antigen-like family member E; Endothelial leukocyte adhesion molecule 1; ELAM-1; Leukocyte-endothelial cell adhesion molecule 2; LECAM2; AltName: CD_antigen=CD62E; Precursor;)
genome : 169,691,781 - 169,703,207 (11,427)
query : 1 - 3,862 (3,862/3,961)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR001304 : C-type lectin
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr_plas 15.5, extr 11, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028687)
Ortholog candidate ( ->
Evola
)
Equus
sp. (Horse) : AF307972
Mus
sp. (Mouse) : AK153623
Bos
sp. (Cow) : BC149190
Gallus
sp. (Chicken) : ENSGALT00000005376
Oryzias
sp. (Medaka) : ENSORLT00000020888
Pongo
sp. (Orangutan) : ENSPPYT00000000637
Tetraodon
sp. (Tetraodon) : GSTENT00004779001
Canis
sp. (Dog) : L23087
Rattus
sp. (Rat) : L25527
Takifugu
sp. (Fugu) : SINFRUT00000165903
Macaca
sp. (Macaque) : XM_001094967
Pan
sp. (Chimpanzee) : XM_001137309
Monodelphis
sp. (Opossum) : XM_001372299
Danio
sp. (Zebrafish) : XM_681324
HIX0028687
HIT000435380
(
BC142677
)
(E-selectin; CD62 antigen-like family member E; Endothelial leukocyte adhesion molecule 1; ELAM-1; Leukocyte-endothelial cell adhesion molecule 2; LECAM2; AltName: CD_antigen=CD62E; Precursor;)
genome : 169,691,781 - 169,703,207 (11,427)
query : 1 - 3,862 (3,862/3,936)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR001304 : C-type lectin
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr_plas 15.5, extr 11, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028687)
HIX0028687
HIT000197494 (
NM_000450
)
(E-selectin; CD62 antigen-like family member E; Endothelial leukocyte adhesion molecule 1; ELAM-1; Leukocyte-endothelial cell adhesion molecule 2; LECAM2; AltName: CD_antigen=CD62E; Precursor;)
genome : 169,691,781 - 169,703,220 (11,440)
query : 1 - 3,875 (3,875/3,875)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr_plas 15.5, extr 11, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028687)
HIX0028687
HIT000349059 (
ENST00000367779
)
(E-selectin; CD62 antigen-like family member E; Endothelial leukocyte adhesion molecule 1; ELAM-1; Leukocyte-endothelial cell adhesion molecule 2; LECAM2; AltName: CD_antigen=CD62E; Precursor;)
genome : 169,691,781 - 169,703,220 (11,440)
query : 1 - 3,497 (3,497/3,497)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17.5, extr_plas 15, extr 9.5, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028687)
HIX0028687
HIT000349060 (
ENST00000367780
)
(E-selectin; CD62 antigen-like family member E; Endothelial leukocyte adhesion molecule 1; ELAM-1; Leukocyte-endothelial cell adhesion molecule 2; LECAM2; AltName: CD_antigen=CD62E; Precursor;)
genome : 169,691,781 - 169,703,220 (11,440)
query : 1 - 3,500 (3,500/3,500)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15.5, extr_plas 15, extr 11.5, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028687)
HIX0028687
HIT000349061 (
ENST00000367781
)
(E-selectin; CD62 antigen-like family member E; Endothelial leukocyte adhesion molecule 1; ELAM-1; Leukocyte-endothelial cell adhesion molecule 2; LECAM2; AltName: CD_antigen=CD62E; Precursor;)
genome : 169,691,781 - 169,703,220 (11,440)
query : 1 - 3,686 (3,686/3,686)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16.5, extr_plas 15, extr 10.5, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028687)
HIX0028687
HIT000349062 (
ENST00000367782
)
(E-selectin; CD62 antigen-like family member E; Endothelial leukocyte adhesion molecule 1; ELAM-1; Leukocyte-endothelial cell adhesion molecule 2; LECAM2; AltName: CD_antigen=CD62E; Precursor;)
genome : 169,691,781 - 169,703,220 (11,440)
query : 1 - 3,686 (3,686/3,686)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr_plas 15.5, plas 15, extr 12, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028687)
HIX0028687
HIT000128301 (
ENST00000333360
)
(E-selectin; CD62 antigen-like family member E; Endothelial leukocyte adhesion molecule 1; ELAM-1; Leukocyte-endothelial cell adhesion molecule 2; LECAM2; AltName: CD_antigen=CD62E; Precursor;)
genome : 169,691,782 - 169,703,203 (11,422)
query : 1 - 3,857 (3,857/3,857)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr_plas 15.5, extr 11, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028687)
HIX0028687
HIT000195381
(
M30640
)
(E-selectin; CD62 antigen-like family member E; Endothelial leukocyte adhesion molecule 1; ELAM-1; Leukocyte-endothelial cell adhesion molecule 2; LECAM2; AltName: CD_antigen=CD62E; Precursor;)
genome : 169,691,782 - 169,703,203 (11,422)
query : 1 - 3,856 (3,856/3,856)
14 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR001304 : C-type lectin
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr_plas 15.5, extr 11, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028687)
HIX0028687
HIT000194947
(
M24736
)
(E-selectin; CD62 antigen-like family member E; Endothelial leukocyte adhesion molecule 1; ELAM-1; Leukocyte-endothelial cell adhesion molecule 2; LECAM2; AltName: CD_antigen=CD62E; Precursor;)
genome : 169,691,782 - 169,703,179 (11,398)
query : 1 - 3,834 (3,834/3,834)
14 exons
identity = 0.999
3'(0.998;0.986;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR001304 : C-type lectin
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr_plas 15.5, extr 11, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028687)
HIX0028687
HIT000349056 (
ENST00000367776
)
(E-selectin; CD62 antigen-like family member E; Endothelial leukocyte adhesion molecule 1; ELAM-1; Leukocyte-endothelial cell adhesion molecule 2; LECAM2; AltName: CD_antigen=CD62E; Precursor;)
genome : 169,691,782 - 169,702,801 (11,020)
query : 1 - 3,576 (3,576/3,576)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16.5, extr_plas 15, extr 10.5, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028687)
HIX0028687
HIT000349057 (
ENST00000367777
)
(E-selectin; CD62 antigen-like family member E; Endothelial leukocyte adhesion molecule 1; ELAM-1; Leukocyte-endothelial cell adhesion molecule 2; LECAM2; AltName: CD_antigen=CD62E; Precursor;)
genome : 169,691,782 - 169,702,801 (11,020)
query : 1 - 3,576 (3,576/3,576)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr_plas 15.5, plas 15, extr 12, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028687)
HIX0028687
HIT000349055 (
ENST00000367775
)
(E-selectin; CD62 antigen-like family member E; Endothelial leukocyte adhesion molecule 1; ELAM-1; Leukocyte-endothelial cell adhesion molecule 2; LECAM2; AltName: CD_antigen=CD62E; Precursor;)
genome : 169,691,782 - 169,702,800 (11,019)
query : 1 - 3,389 (3,389/3,389)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15.5, extr_plas 15, extr 11.5, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028687)
HIX0028687
HIT000390514
(
BC131551
)
(E-selectin; CD62 antigen-like family member E; Endothelial leukocyte adhesion molecule 1; ELAM-1; Leukocyte-endothelial cell adhesion molecule 2; LECAM2; AltName: CD_antigen=CD62E; Precursor;)
genome : 169,693,520 - 169,703,179 (9,660)
query : 1 - 2,095 (2,095/2,095)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR001304 : C-type lectin
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr_plas 15.5, extr 11, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028687)
HIX0028687
HIT000349054 (
ENST00000367774
)
(E-selectin; CD62 antigen-like family member E; Endothelial leukocyte adhesion molecule 1; ELAM-1; Leukocyte-endothelial cell adhesion molecule 2; LECAM2; AltName: CD_antigen=CD62E; Precursor;)
genome : 169,694,870 - 169,702,801 (7,932)
query : 1 - 1,518 (1,518/1,518)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17.5, extr_plas 15, extr 9.5, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028687)
HIX0028687
HIT000433080
(
AK314214
)
(E-selectin; CD62 antigen-like family member E; Endothelial leukocyte adhesion molecule 1; ELAM-1; Leukocyte-endothelial cell adhesion molecule 2; LECAM2; AltName: CD_antigen=CD62E; Precursor;)
genome : 169,694,885 - 169,703,220 (8,336)
query : 1 - 1,990 (1,990/1,990)
13 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;1.000;1.000;0.997;0.988;1.000)5'
coverage = 1.000
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR000742 : Epidermal growth factor-like domain
IPR001304 : C-type lectin
IPR002396 : Selectin superfamily
IPR013032 : EGF-like, conserved site
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr_plas 15.5, extr 11, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028687)
HIX0028687
HIT000253277
(
AY367062
)
(E-selectin; CD62 antigen-like family member E; Endothelial leukocyte adhesion molecule 1; ELAM-1; Leukocyte-endothelial cell adhesion molecule 2; LECAM2; AltName: CD_antigen=CD62E; Precursor;)
genome : 169,695,870 - 169,697,039 (1,170)
query : 1 - 415 (415/415)
3 exons
identity = 0.998
3'(1.000;1.000;0.994)5'
coverage = 1.000
InterPro :
IPR000436 : Sushi/SCR/CCP domain
IPR002396 : Selectin superfamily
GO :
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 7, cyto 5, E.R. 5, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028687)
HIX0028687
HIT000565989 (
ENST00000461085
)
(E-selectin; CD62 antigen-like family member E; Endothelial leukocyte adhesion molecule 1; ELAM-1; Leukocyte-endothelial cell adhesion molecule 2; LECAM2; AltName: CD_antigen=CD62E; Precursor;)
genome : 169,700,632 - 169,701,859 (1,228)
query : 1 - 556 (556/556)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 7, nucl 6.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028687)
HIX0161446
HIT000552205 (
ENST00000454271
)
(Hypothetical short protein.)
genome : 169,732,070 - 169,733,789 (1,720)
query : 1 - 677 (677/677)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 3.5, mito 3, cyto_nucl 3, cyto 1.5,
E.R._mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161446)
HIX0001318
HIT000211334 (
NM_033418
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 169,761,674 - 169,764,061 (2,388)
query : 1 - 1,471 (1,471/1,487)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001318)
HIX0001318
HIT000033894
(
BC008679
)
(Histidine protein methyltransferase 1 homolog; EC=2.1.1.-; Arsenic-transactivated protein 2; AsTP2; Methyltransferase-like protein 18;)
genome : 169,761,674 - 169,763,830 (2,157)
query : 1 - 1,422 (1,422/1,438)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
InterPro :
IPR019410 : Nicotinamide N-methyltransferase-like
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001318)
HIX0001318
HIT000118690 (
ENST00000310392
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 169,761,670 - 169,764,107 (2,438)
query : 1 - 1,521 (1,521/1,521)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001318)
HIX0001318
HIT000250057
(
AL035369
)
Representative transcript
(Histidine protein methyltransferase 1 homolog; EC=2.1.1.-; Arsenic-transactivated protein 2; AsTP2; Methyltransferase-like protein 18;)
genome : 169,761,670 - 169,764,031 (2,362)
query : 1 - 1,445 (1,445/1,445)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
InterPro :
IPR019410 : Nicotinamide N-methyltransferase-like
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001318)
HIX0001318
HIT000116447 (
ENST00000303469
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 169,761,670 - 169,763,830 (2,161)
query : 1 - 1,426 (1,426/1,426)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001318)
HIX0001318
HIT000432775
(
AK313909
)
(Histidine protein methyltransferase 1 homolog; EC=2.1.1.-; Arsenic-transactivated protein 2; AsTP2; Methyltransferase-like protein 18;)
genome : 169,761,718 - 169,764,035 (2,318)
query : 2 - 1,403 (1,402/1,403)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 0.999
EC number :
EC 2.1.1.-
InterPro :
IPR019410 : Nicotinamide N-methyltransferase-like
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001318)
HIX0001318
HIT000257435
(
AY744366
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 169,761,718 - 169,762,836 (1,119)
query : 1 - 1,119 (1,119/1,119)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR019410 : Nicotinamide N-methyltransferase-like
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001318)
HIX0001318
HIT000267239
(
CR450330
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 169,761,721 - 169,762,836 (1,116)
query : 1 - 1,116 (1,116/1,116)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR019410 : Nicotinamide N-methyltransferase-like
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001318)
HIX0001318
HIT000552406 (
ENST00000454472
)
(Conserved hypothetical protein.)
genome : 169,762,283 - 169,764,104 (1,822)
query : 1 - 850 (850/850)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.5, extr 8, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001318)
HIX0001319
HIT000087637
(
BC011445
)
(Uncharacterized protein C1orf112;)
genome : 169,763,871 - 169,773,521 (9,651)
query : 3 - 921 (919/951)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.993)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 11.5, cyto 11.5, extr 4, mito 2,
pero 2, extr_plas 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000577157 (
ENST00000472795
)
(Uncharacterized protein C1orf112;)
genome : 169,763,871 - 169,773,521 (9,651)
query : 1 - 919 (919/919)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 11.5, cyto 11.5, extr 4, mito 2,
pero 2, extr_plas 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000087583
(
BC011012
)
(Uncharacterized protein C1orf112;)
genome : 169,764,184 - 169,773,482 (9,299)
query : 5 - 780 (776/807)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 12, cyto 9, cyto_nucl 8, nucl 5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000497920
(
AK303296
)
(Uncharacterized protein C1orf112;)
genome : 169,764,181 - 169,798,955 (34,775)
query : 1 - 1,697 (1,697/1,697)
11 exons
identity = 0.999
5'(1.000;1.000;0.990;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR027902 : Protein of unknown function DUF4487
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, plas 6, nucl 6, mito 2, E.R. 2, pero 2,
E.R._mito 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000511745 (
ENST00000413811
)
(Uncharacterized protein C1orf112;)
genome : 169,764,181 - 169,798,955 (34,775)
query : 1 - 1,697 (1,697/1,697)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, plas 6, nucl 6, mito 2, E.R. 2, pero 2,
E.R._mito 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000585707 (
ENST00000481744
)
(Uncharacterized protein C1orf112;)
genome : 169,764,184 - 169,776,978 (12,795)
query : 1 - 755 (755/755)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000600270 (
ENST00000496973
)
(Uncharacterized protein C1orf112;)
genome : 169,764,184 - 169,773,488 (9,305)
query : 1 - 782 (782/782)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 12, cyto 9, cyto_nucl 8, nucl 5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000312882 (
ENST00000359326
)
(Uncharacterized protein C1orf112;)
genome : 169,764,190 - 169,823,221 (59,032)
query : 1 - 4,002 (4,002/4,002)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.3333, cyto_mito 8.83333,
nucl 6.5, plas 2.5, extr_plas 2.5, pero 2, extr 1.5, mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000564731 (
ENST00000459772
)
(Uncharacterized protein C1orf112;)
genome : 169,764,220 - 169,823,221 (59,002)
query : 1 - 3,727 (3,727/3,727)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 9.83333, cyto_mito 8.33333, E.R. 4,
pero 4, nucl 3.5, plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000004042
(
AK001568
)
(Uncharacterized protein C1orf112;)
genome : 169,764,220 - 169,822,226 (58,007)
query : 1 - 2,732 (2,732/2,732)
23 exons
identity = 0.999
5'(1.000;0.976;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, cyto_nucl 10.3333, cyto_mito 8.83333, E.R. 4,
pero 4, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000554618 (
ENST00000456684
)
(Uncharacterized protein C1orf112;)
genome : 169,764,220 - 169,795,258 (31,039)
query : 1 - 1,071 (1,071/1,071)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, plas 6, pero 4, E.R. 3, extr_plas 3,
cysk_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000571224 (
ENST00000466580
)
(Uncharacterized protein C1orf112;)
genome : 169,764,220 - 169,790,860 (26,641)
query : 1 - 815 (815/815)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 6, plas 4, E.R. 3.5, cyto_pero 3.5,
nucl 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000334366
(
BC091516
)
Representative transcript
(Uncharacterized protein C1orf112;)
genome : 169,764,227 - 169,822,228 (58,002)
query : 1 - 2,973 (2,973/3,019)
25 exons
identity = 0.999
5'(1.000;0.987;0.980;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR027902 : Protein of unknown function DUF4487
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.3333, cyto_mito 8.83333,
nucl 6.5, plas 2.5, extr_plas 2.5, pero 2, extr 1.5, mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK141661
Rattus
sp. (Rat) : BC083793
Danio
sp. (Zebrafish) : BC095206
Gallus
sp. (Chicken) : BX931552
Bos
sp. (Cow) : ENSBTAT00000019683
Canis
sp. (Dog) : ENSCAFT00000024057
Equus
sp. (Horse) : ENSECAT00000009420
Monodelphis
sp. (Opossum) : ENSMODT00000004289
Oryzias
sp. (Medaka) : ENSORLT00000020947
Pongo
sp. (Orangutan) : ENSPPYT00000000635
Tetraodon
sp. (Tetraodon) : GSTENT00009028001
Takifugu
sp. (Fugu) : SINFRUT00000177713
Macaca
sp. (Macaque) : XM_001095525
Pan
sp. (Chimpanzee) : XM_001138398
HIX0001319
HIT000021348
(
AK096493
)
(Uncharacterized protein C1orf112;)
genome : 169,764,231 - 169,822,226 (57,996)
query : 1 - 2,967 (2,967/2,967)
25 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR027902 : Protein of unknown function DUF4487
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.3333, cyto_mito 8.83333,
nucl 6.5, plas 2.5, extr_plas 2.5, pero 2, extr 1.5, mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000429504
(
AK310638
)
(Conserved hypothetical protein.)
genome : 169,764,231 - 169,821,378 (57,148)
query : 1 - 2,478 (2,478/2,478)
19 exons
identity = 0.998
5'(1.000;0.976;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.981;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7, nucl 5, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000493993
(
AK299369
)
(Uncharacterized protein C1orf112;)
genome : 169,764,235 - 169,795,268 (31,034)
query : 1 - 1,066 (1,066/1,066)
11 exons
identity = 0.999
5'(1.000;0.976;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR027902 : Protein of unknown function DUF4487
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, plas 6, pero 4, E.R. 3, extr_plas 3,
cysk_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000112668 (
ENST00000286031
)
(Uncharacterized protein C1orf112;)
genome : 169,764,550 - 169,823,221 (58,672)
query : 1 - 4,355 (4,355/4,355)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.3333, cyto_mito 8.83333,
nucl 6.5, plas 2.5, extr_plas 2.5, pero 2, extr 1.5, mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000207016 (
NM_018186
)
(Uncharacterized protein C1orf112;)
genome : 169,764,550 - 169,822,229 (57,680)
query : 1 - 3,363 (3,363/3,363)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.3333, cyto_mito 8.83333,
nucl 6.5, plas 2.5, extr_plas 2.5, pero 2, extr 1.5, mito 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000250332
(
AL354614
)
(Uncharacterized protein C1orf112;)
genome : 169,764,550 - 169,822,229 (57,680)
query : 1 - 3,363 (3,363/3,363)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR027902 : Protein of unknown function DUF4487
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.3333, cyto_mito 8.83333,
nucl 6.5, plas 2.5, extr_plas 2.5, pero 2, extr 1.5, mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000338733
(
BC107169
)
(Uncharacterized protein C1orf112;)
genome : 169,765,062 - 169,822,178 (57,117)
query : 1 - 2,800 (2,800/2,801)
24 exons
identity = 0.999
5'(1.000;0.980;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR027902 : Protein of unknown function DUF4487
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.3333, cyto_mito 8.83333,
nucl 6.5, plas 2.5, extr_plas 2.5, pero 2, extr 1.5, mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000338732
(
BC107168
)
(Uncharacterized protein C1orf112;)
genome : 169,765,062 - 169,822,178 (57,117)
query : 1 - 2,661 (2,661/2,661)
23 exons
identity = 0.999
5'(1.000;0.980;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR027902 : Protein of unknown function DUF4487
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, cyto_nucl 15, nucl 6, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000260580
(
BC062689
)
(Uncharacterized protein C1orf112;)
genome : 169,770,059 - 169,773,525 (3,467)
query : 4 - 613 (610/644)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.997)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13.5, nucl 9, extr 4, pero 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000489193
(
AK294569
)
(Uncharacterized protein C1orf112;)
genome : 169,772,296 - 169,822,227 (49,932)
query : 1 - 2,504 (2,504/2,504)
20 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR027902 : Protein of unknown function DUF4487
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, plas 5, pero 5, cyto 3.5, nucl 3,
cyto_mito 3, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001319
HIT000006806
(
AK023532
)
(Uncharacterized protein C1orf112;)
genome : 169,796,209 - 169,823,139 (26,931)
query : 1 - 2,708 (2,708/2,708)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.984;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR027902 : Protein of unknown function DUF4487
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, cyto 9, cyto_nucl 9, nucl 5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001319)
HIX0001320
HIT000055999
(
BX647352
)
(Protein-associating with the carboxyl-terminal domain of ezrin; Ezrin-binding protein PACE-1; SCY1-like protein 3;)
genome : 169,818,766 - 169,863,408 (44,643)
query : 1 - 3,688 (3,688/3,704)
14 exons
identity = 0.973
3'(0.999;0.639;0.938;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 24, pero 5, mito 1.5, E.R._mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001320)
HIX0001320
HIT000349052 (
ENST00000367772
)
(Protein-associating with the carboxyl-terminal domain of ezrin; Ezrin-binding protein PACE-1; SCY1-like protein 3;)
genome : 169,821,804 - 169,863,076 (41,273)
query : 1 - 3,477 (3,477/3,477)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 27.5, extr_plas 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001320)
HIX0001320
HIT000036841
(
BC014662
)
(Protein-associating with the carboxyl-terminal domain of ezrin; Ezrin-binding protein PACE-1; SCY1-like protein 3;)
genome : 169,822,230 - 169,863,037 (40,808)
query : 1 - 2,855 (2,855/2,874)
13 exons
identity = 0.996
3'(0.990;0.996;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 26.5, extr_plas 14.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001320)
HIX0001320
HIT000207928 (
NM_020423
)
(Protein-associating with the carboxyl-terminal domain of ezrin isoform 1.)
genome : 169,822,215 - 169,863,100 (40,886)
query : 1 - 2,928 (2,928/2,928)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 26.5, extr_plas 14.5, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001320)
HIX0001320
HIT000318239 (
NM_181093
)
(Protein-associating with the carboxyl-terminal domain of ezrin; Ezrin-binding protein PACE-1; SCY1-like protein 3;)
genome : 169,822,215 - 169,863,100 (40,886)
query : 1 - 3,090 (3,090/3,090)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 27.5, extr_plas 15
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001320)
HIX0001320
HIT000349051 (
ENST00000367771
)
(Protein-associating with the carboxyl-terminal domain of ezrin isoform 1.)
genome : 169,822,215 - 169,863,093 (40,879)
query : 1 - 2,921 (2,921/2,921)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 26.5, extr_plas 14.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001320)
HIX0001320
HIT000250267
(
AL117233
)
Representative transcript
(Protein-associating with the carboxyl-terminal domain of ezrin isoform 1.)
genome : 169,822,215 - 169,862,983 (40,769)
query : 1 - 2,811 (2,811/2,811)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 26.5, extr_plas 14.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001320)
HIX0001320
HIT000349050 (
ENST00000367770
)
(Protein-associating with the carboxyl-terminal domain of ezrin; Ezrin-binding protein PACE-1; SCY1-like protein 3;)
genome : 169,822,215 - 169,858,029 (35,815)
query : 1 - 2,916 (2,916/2,916)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 27.5, extr_plas 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001320)
HIX0001320
HIT000425304
(
AK292507
)
(Protein-associating with the carboxyl-terminal domain of ezrin; Ezrin-binding protein PACE-1; SCY1-like protein 3;)
genome : 169,822,233 - 169,863,046 (40,814)
query : 1 - 3,018 (3,018/3,020)
14 exons
identity = 0.999
3'(0.999;0.997;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 27.5, extr_plas 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001320)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ851694
Mus
sp. (Mouse) : AK162937
Danio
sp. (Zebrafish) : BC044195
Equus
sp. (Horse) : ENSECAT00000023819
Monodelphis
sp. (Opossum) : ENSMODT00000038136
Oryzias
sp. (Medaka) : ENSORLT00000020958
Pongo
sp. (Orangutan) : ENSPPYT00000000634
Tetraodon
sp. (Tetraodon) : GSTENT00009027001
Takifugu
sp. (Fugu) : SINFRUT00000130019
Rattus
sp. (Rat) : XM_001075015
Macaca
sp. (Macaque) : XM_001096051
Pan
sp. (Chimpanzee) : XM_513987
Canis
sp. (Dog) : XM_537198
HIX0001320
HIT000081464
(
AF540957
)
(Protein-associating with the carboxyl-terminal domain of ezrin; Ezrin-binding protein PACE-1; SCY1-like protein 3;)
genome : 169,822,341 - 169,858,033 (35,693)
query : 1 - 2,632 (2,632/2,632)
12 exons
identity = 0.998
3'(0.997;0.997;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 26.5, extr_plas 14.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001320)
HIX0001320
HIT000084738
(
AY144493
)
(Protein-associating with the carboxyl-terminal domain of ezrin; Ezrin-binding protein PACE-1; SCY1-like protein 3;)
genome : 169,822,341 - 169,858,033 (35,693)
query : 1 - 2,794 (2,794/2,794)
13 exons
identity = 0.999
3'(0.997;0.997;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 27.5, extr_plas 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001320)
HIX0001320
HIT000499105
(
AK304481
)
(Protein-associating with the carboxyl-terminal domain of ezrin isoform 1.)
genome : 169,822,715 - 169,839,745 (17,031)
query : 1 - 2,020 (2,020/2,020)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10.5, extr_plas 8.5, pero 6, extr 5.5, nucl 5,
cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001320)
HIX0001320
HIT000521604 (
ENST00000423670
)
(Protein-associating with the carboxyl-terminal domain of ezrin; Ezrin-binding protein PACE-1; SCY1-like protein 3;)
genome : 169,823,652 - 169,863,408 (39,757)
query : 1 - 2,077 (2,077/2,077)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 27, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001320)
HIX0001320
HIT000574723 (
ENST00000470238
)
(Protein-associating with the carboxyl-terminal domain of ezrin; Ezrin-binding protein PACE-1; SCY1-like protein 3;)
genome : 169,828,260 - 169,863,093 (34,834)
query : 1 - 1,538 (1,538/1,538)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 8, cyto 6, E.R._mito 5.33333, plas 5,
cyto_nucl 5, nucl 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001320)
HIX0001321
HIT000205247 (
NM_014970
)
(Kinesin-associated protein 3; KAP-3; KAP3; Smg GDS-associated protein;)
genome : 169,890,471 - 170,043,879 (153,409)
query : 1 - 2,996 (2,996/3,011)
20 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.942;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 8, mito_pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
HIX0001321
HIT000657128 (
NM_001204514
)
(Kinesin-associated protein 3 isoform 2.)
genome : 169,890,471 - 170,043,879 (153,409)
query : 1 - 3,160 (3,160/3,175)
21 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.942;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, nucl 4.5, plas 4, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
HIX0001321
HIT000657129 (
NM_001204516
)
(Kinesin-associated protein 3 isoform 3.)
genome : 169,890,471 - 170,043,879 (153,409)
query : 1 - 2,864 (2,864/2,879)
19 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.942;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_mito 12.1667, nucl 6,
mito_pero 2.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
HIX0001321
HIT000040603
(
BC028679
)
Representative transcript
(Kinesin-associated protein 3; KAP-3; KAP3; Smg GDS-associated protein;)
genome : 169,890,471 - 170,043,836 (153,366)
query : 1 - 2,953 (2,953/2,968)
20 exons
identity = 0.997
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.994;1.000;1.000;0.942;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR008658 : Kinesin-associated protein 3
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0005871 : Cellular Component : kinesin complex
0019894 : Molecular Function : kinesin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 8, mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC080842
Bos
sp. (Cow) : BC105229
Pongo
sp. (Orangutan) : CR859569
Mus
sp. (Mouse) : D50367
Canis
sp. (Dog) : ENSCAFT00000023932
Oryzias
sp. (Medaka) : ENSORLT00000017410
Takifugu
sp. (Fugu) : SINFRUT00000134054
Rattus
sp. (Rat) : XM_001070739
Pan
sp. (Chimpanzee) : XM_001139809
Monodelphis
sp. (Opossum) : XM_001372552
Equus
sp. (Horse) : XM_001491829
Gallus
sp. (Chicken) : XM_422239
Danio
sp. (Zebrafish) : XM_684890
HIX0001321
HIT000657130 (
NM_001204517
)
(Kinesin-associated protein 3 isoform 4.)
genome : 169,890,471 - 170,038,056 (147,586)
query : 1 - 4,105 (4,105/4,120)
20 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.942;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 12.8333, cyto_mito 12, nucl 6.5,
mito 4.5, mito_pero 4.33333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
HIX0001321
HIT000009745
(
AK026471
)
(Kinesin-associated protein 3; KAP-3; KAP3; Smg GDS-associated protein;)
genome : 169,890,471 - 170,043,658 (153,188)
query : 1 - 2,775 (2,775/2,788)
20 exons
identity = 0.995
3'(0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.942;
1.000;1.000;1.000;1.000;0.985;0.988)5'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR008658 : Kinesin-associated protein 3
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0005871 : Cellular Component : kinesin complex
0019894 : Molecular Function : kinesin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_mito 11.6667, nucl 8,
mito_pero 2.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
HIX0001321
HIT000098867
(
BC048012
)
(Kinesin-associated protein 3 isoform 3.)
genome : 169,890,477 - 170,043,729 (153,253)
query : 196 - 2,902 (2,707/2,917)
19 exons
identity = 0.996
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.994;1.000;1.000;0.942;
1.000;1.000;1.000;1.000;0.993)5'
coverage = 0.933
InterPro :
IPR000225 : Armadillo
IPR008658 : Kinesin-associated protein 3
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0005871 : Cellular Component : kinesin complex
0019894 : Molecular Function : kinesin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_mito 12.1667, nucl 6,
mito_pero 2.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
HIX0001321
HIT000314840 (
ENST00000361580
)
(Kinesin-associated protein 3; KAP-3; KAP3; Smg GDS-associated protein;)
genome : 169,890,467 - 170,043,836 (153,370)
query : 1 - 2,957 (2,957/2,957)
20 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.942;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 8, mito_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
HIX0001321
HIT000349047 (
ENST00000367767
)
(Kinesin-associated protein 3 isoform 3.)
genome : 169,890,467 - 170,043,729 (153,263)
query : 1 - 2,718 (2,718/2,718)
19 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.942;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_mito 12.1667, nucl 6,
mito_pero 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
HIX0001321
HIT000349045 (
ENST00000367765
)
(Kinesin-associated protein 3 isoform 4.)
genome : 169,890,467 - 170,038,058 (147,592)
query : 1 - 4,111 (4,111/4,111)
20 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.942;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 12.8333, cyto_mito 12, nucl 6.5,
mito 4.5, mito_pero 4.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
HIX0001321
HIT000491992
(
AK297368
)
(Kinesin-associated protein 3 isoform 3.)
genome : 169,890,472 - 170,043,806 (153,335)
query : 1 - 2,790 (2,790/2,790)
19 exons
identity = 0.996
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.988;
1.000;1.000;1.000;1.000;1.000;1.000;0.942;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR008658 : Kinesin-associated protein 3
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0005871 : Cellular Component : kinesin complex
0019894 : Molecular Function : kinesin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_mito 12.1667, nucl 6,
mito_pero 2.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
HIX0001321
HIT000042770
(
AK122897
)
(Kinesin-associated protein 3 isoform 4.)
genome : 169,890,478 - 170,038,056 (147,579)
query : 3 - 4,100 (4,098/4,100)
20 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;0.942;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR008658 : Kinesin-associated protein 3
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0005871 : Cellular Component : kinesin complex
0019894 : Molecular Function : kinesin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 12.8333, cyto_mito 12, nucl 6.5,
mito 4.5, mito_pero 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
HIX0001321
HIT000496536
(
AK301912
)
(Kinesin-associated protein 3; KAP-3; KAP3; Smg GDS-associated protein;)
genome : 169,890,478 - 169,995,042 (104,565)
query : 1 - 1,956 (1,956/1,956)
13 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR008658 : Kinesin-associated protein 3
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0005871 : Cellular Component : kinesin complex
0019894 : Molecular Function : kinesin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 8, pero 7, E.R. 4.5, E.R._mito 4.5, plas 4,
cyto 4, cyto_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
HIX0001321
HIT000639950 (
ENST00000540905
)
(Kinesin-associated protein 3; KAP-3; KAP3; Smg GDS-associated protein;)
genome : 169,890,478 - 169,995,042 (104,565)
query : 1 - 1,956 (1,956/1,956)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 8, pero 7, E.R. 4.5, E.R._mito 4.5, plas 4,
cyto 4, cyto_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
HIX0001321
HIT000045807
(
AK125934
)
(Kinesin-associated protein 3; KAP-3; KAP3; Smg GDS-associated protein;)
genome : 169,890,478 - 169,894,191 (3,714)
query : 1 - 3,716 (3,716/3,716)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
HIX0001321
HIT000497676
(
AK303052
)
(Kinesin-associated protein 3 isoform 2.)
genome : 169,890,575 - 170,043,836 (153,262)
query : 1 - 3,013 (3,013/3,015)
21 exons
identity = 0.997
3'(1.000;0.990;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.942;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000225 : Armadillo
IPR008658 : Kinesin-associated protein 3
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0005871 : Cellular Component : kinesin complex
0019894 : Molecular Function : kinesin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, nucl 4.5, mito 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
HIX0001321
HIT000637411 (
ENST00000538366
)
(Kinesin-associated protein 3 isoform 2.)
genome : 169,890,573 - 170,043,836 (153,264)
query : 1 - 3,015 (3,015/3,015)
21 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.942;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, nucl 4.5, plas 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
HIX0001321
HIT000220610
(
U59919
)
(Kinesin-associated protein 3; KAP-3; KAP3; Smg GDS-associated protein;)
genome : 169,890,736 - 170,043,793 (153,058)
query : 4 - 2,648 (2,645/2,648)
20 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;0.942;
1.000;1.000;1.000;0.994;1.000;0.991)5'
coverage = 0.999
InterPro :
IPR000225 : Armadillo
IPR008658 : Kinesin-associated protein 3
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0005871 : Cellular Component : kinesin complex
0019894 : Molecular Function : kinesin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 8, mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
HIX0001321
HIT000434452
(
AK315586
)
(Kinesin-associated protein 3; KAP-3; KAP3; Smg GDS-associated protein;)
genome : 169,890,817 - 170,043,793 (152,977)
query : 1 - 2,564 (2,564/2,564)
20 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;0.942;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR008658 : Kinesin-associated protein 3
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0005871 : Cellular Component : kinesin complex
0019894 : Molecular Function : kinesin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 8, mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
HIX0001322
HIT000004754
(
AK021480
)
Representative transcript
(Conserved hypothetical protein.)
genome : 169,900,078 - 169,901,550 (1,473)
query : 1 - 1,473 (1,473/1,474)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28.5, mito_pero 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001322)
HIX0161293
HIT000546417_01 (
ENST00000448483
)
(Ribosomal protein S10 domain containing protein.)
genome : 169,959,208 - 169,959,337 (130)
query : 1 - 130 (130/130)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 8, cyto_nucl 6.33333, mito 6,
cyto_plas 4.83333, mito_nucl 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161293)
HIX0023807
HIT000049483
(
AK130212
)
Representative transcript
(Conserved hypothetical protein.)
genome : 169,990,599 - 169,991,390 (792)
query : 1 - 790 (790/791)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023807)
HIX0023807
HIT000347371 (
ENST00000366091
)
(Conserved hypothetical protein.)
genome : 169,990,599 - 169,991,390 (792)
query : 1 - 790 (790/790)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023807)
HIX0161060
HIT000538255 (
ENST00000440321
)
(Hypothetical short protein.)
genome : 169,993,218 - 169,993,824 (607)
query : 1 - 341 (341/341)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161060)
HIX0001321
HIT000578588 (
ENST00000474292
)
(Kinesin-associated protein 3; KAP-3; KAP3; Smg GDS-associated protein;)
genome : 169,993,609 - 170,001,351 (7,743)
query : 1 - 454 (454/454)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 10, cyto_mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
HIX0001321
HIT000594106 (
ENST00000490550
)
(Kinesin-associated protein 3 isoform 4.)
genome : 170,004,650 - 170,054,349 (49,700)
query : 1 - 704 (704/704)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001321)
HIX0029059
HIT000244578
(
AJ012497
)
Representative transcript
(Non-protein coding transcript.)
genome : 170,011,227 - 170,011,347 (121)
query : 1 - 121 (121/131)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029059)
HIX0161490
HIT000553503 (
ENST00000455569
)
(Conserved hypothetical protein.)
genome : 170,084,777 - 170,085,717 (941)
query : 1 - 941 (941/941)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr_plas 7.5, plas 7, cyto 7, extr 6, mito 5.5,
E.R._mito 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161490)
HIX0056992
HIT000537307 (
ENST00000439373
)
(N-terminal Xaa-Pro-Lys N-methyltransferase 1.)
genome : 170,115,142 - 170,136,931 (21,790)
query : 1 - 992 (992/992)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 9.16667, nucl 7, cyto 7,
cyto_pero 6.83333, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056992)
HIX0056992
HIT000503589
(
BC171858
)
Representative transcript
(N-terminal Xaa-Pro-Lys N-methyltransferase 1.)
genome : 170,115,188 - 170,136,931 (21,744)
query : 1 - 946 (946/946)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008576 : Alpha-N-methyltransferase NTM1
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
GO :
0008168 : Molecular Function : methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 9.16667, nucl 7, cyto 7,
cyto_pero 6.83333, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056992)
Ortholog candidate ( ->
Evola
)
Tetraodon
sp. (Tetraodon) : CR672926
Oryzias
sp. (Medaka) : ENSORLT00000016879
Pongo
sp. (Orangutan) : ENSPPYT00000000630
Takifugu
sp. (Fugu) : SINFRUT00000147921
Rattus
sp. (Rat) : XM_001074994
Macaca
sp. (Macaque) : XM_001093866
Monodelphis
sp. (Opossum) : XM_001372612
Equus
sp. (Horse) : XM_001491868
Danio
sp. (Zebrafish) : XM_001923085
Mus
sp. (Mouse) : XM_136356
Gallus
sp. (Chicken) : XM_426622
Canis
sp. (Dog) : XM_547472
Bos
sp. (Cow) : XM_599563
Pan
sp. (Chimpanzee) : XR_022805
HIX0056992
HIT000503415
(
BC157860
)
(N-terminal Xaa-Pro-Lys N-methyltransferase 1.)
genome : 170,115,188 - 170,136,923 (21,736)
query : 1 - 938 (938/938)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008576 : Alpha-N-methyltransferase NTM1
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
GO :
0008168 : Molecular Function : methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 9.16667, nucl 7, cyto 7,
cyto_pero 6.83333, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056992)
HIX0056992
HIT000560290 (
NM_001136107
)
(N-terminal Xaa-Pro-Lys N-methyltransferase 1.)
genome : 170,115,188 - 170,136,923 (21,736)
query : 1 - 938 (938/938)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 9.16667, nucl 7, cyto 7,
cyto_pero 6.83333, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056992)
HIX0203891
HIT000659331 (
NR_036065
)
(Non-protein coding transcript.)
genome : 170,120,519 - 170,120,603 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203891)
HIX0203891
HIT000689552 (
ENST00000577602
)
(Non-protein coding transcript.)
genome : 170,120,519 - 170,120,603 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203891)
HIX0203890
HIT000659330 (
NR_036064
)
(Non-protein coding transcript.)
genome : 170,120,519 - 170,120,603 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203890)
HIX0056992
HIT000349044 (
ENST00000367764
)
(N-terminal Xaa-Pro-Lys N-methyltransferase 1; EC=2.1.1.244; Alpha N-terminal protein methyltransferase 1A; Methyltransferase-like protein 11A; X-Pro-Lys N-terminal protein methyltransferase 1A; NTM1A;)
genome : 170,127,110 - 170,136,704 (9,595)
query : 1 - 716 (716/716)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056992)
HIX0161018
HIT000537118 (
ENST00000439184
)
(Hypothetical short protein.)
genome : 170,143,544 - 170,210,428 (66,885)
query : 1 - 760 (760/760)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12.5, extr 7, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161018)
HIX0161452
HIT000552385 (
ENST00000454451
)
(NIF system FeS cluster assembly, NifU, N-terminal domain containing protein.)
genome : 170,180,151 - 170,180,598 (448)
query : 1 - 448 (448/448)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11.5, cyto_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161452)
HIX0023771
HIT000047978
(
AK128105
)
Representative transcript
(Conserved hypothetical protein.)
genome : 170,214,542 - 170,218,267 (3,726)
query : 1 - 3,726 (3,726/3,726)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 11, cyto 7, mito_nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023771)
HIX0029237
HIT000563130 (
NR_026957
)
(Hypothetical protein.)
genome : 170,240,541 - 170,253,349 (12,809)
query : 1 - 1,730 (1,730/1,731)
4 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029237)
HIX0029237
HIT000093080
(
BC033381
)
Representative transcript
(Hypothetical protein.)
genome : 170,240,744 - 170,248,073 (7,330)
query : 1 - 1,457 (1,457/1,471)
3 exons
identity = 0.997
3'(1.000;0.996;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029237)
HIX0029237
HIT000538338 (
ENST00000440404
)
(Hypothetical protein.)
genome : 170,240,744 - 170,248,073 (7,330)
query : 1 - 1,457 (1,457/1,457)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029237)
HIX0029237
HIT000549373 (
ENST00000451439
)
(Non-protein coding transcript.)
genome : 170,240,908 - 170,253,349 (12,442)
query : 1 - 388 (388/388)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029237)
HIX0029237
HIT000388597
(
BC125144
)
(Hypothetical protein.)
genome : 170,240,939 - 170,243,218 (2,280)
query : 1 - 729 (729/729)
2 exons
identity = 0.999
3'(1.000;0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029237)
HIX0160167
HIT000505710 (
ENST00000406739
)
(HAUS augmin-like complex subunit 4 family protein.)
genome : 170,338,364 - 170,339,508 (1,145)
query : 1 - 1,145 (1,145/1,145)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, cyto 13, cyto_nucl 10, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160167)
HIX0160167
HIT000690965 (
ENST00000579029
)
(Non-protein coding transcript.)
genome : 170,339,354 - 170,339,436 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160167)
HIX0159722
HIT000021184
(
AK096329
)
Representative transcript
(Hypothetical protein.)
genome : 170,429,594 - 170,489,887 (60,294)
query : 1 - 2,127 (2,127/2,127)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 7.5, extr_plas 7.5, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159722)
HIX0159722
HIT000514350 (
ENST00000416416
)
(Hypothetical protein.)
genome : 170,429,594 - 170,486,847 (57,254)
query : 1 - 2,080 (2,080/2,080)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 7.5, extr_plas 7.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159722)
HIX0159722
HIT000261802
(
BC065239
)
(Hypothetical protein.)
genome : 170,430,458 - 170,463,681 (33,224)
query : 1 - 1,363 (1,363/1,378)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 7.5, extr_plas 7.5, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159722)
HIX0159722
HIT000544036 (
ENST00000446102
)
(Hypothetical protein.)
genome : 170,430,458 - 170,463,681 (33,224)
query : 1 - 1,363 (1,363/1,363)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 7.5, extr_plas 7.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159722)
HIX0159722
HIT000554017 (
ENST00000456083
)
(Hypothetical short protein.)
genome : 170,431,350 - 170,501,788 (70,439)
query : 1 - 521 (521/521)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 7.5, cyto_nucl 5.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159722)
HIX0159722
HIT000518954 (
ENST00000421020
)
(Hypothetical short protein.)
genome : 170,479,102 - 170,501,141 (22,040)
query : 1 - 755 (755/755)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11.5, cyto_nucl 8.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159722)
HIX0001324
HIT000213556 (
NM_152281
)
(RAB6-interacting golgin; N-terminal kinase-like-binding protein 1; NTKL-BP1; NTKL-binding protein 1; hNTKL-BP1; SCY1-like 1-binding protein 1; SCYL1-BP1; SCYL1-binding protein 1;)
genome : 170,501,263 - 170,522,974 (21,712)
query : 1 - 2,583 (2,583/2,583)
5 exons
identity = 1.000
5'(0.994;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 9, cyto 9, cyto_nucl 9, E.R._mito 5, cyto_golg 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001324)
HIX0001324
HIT000563462 (
NR_027397
)
(RAB6-interacting golgin; N-terminal kinase-like-binding protein 1; NTKL-BP1; NTKL-binding protein 1; hNTKL-BP1; SCY1-like 1-binding protein 1; SCYL1-BP1; SCYL1-binding protein 1;)
genome : 170,501,263 - 170,522,974 (21,712)
query : 1 - 2,587 (2,587/2,587)
5 exons
identity = 1.000
5'(0.994;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 10, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001324)
HIX0001324
HIT000427205
(
AK308339
)
(RAB6-interacting golgin isoform b precursor.)
genome : 170,501,263 - 170,521,331 (20,069)
query : 1 - 944 (944/944)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.994)3'
coverage = 1.000
InterPro :
IPR007033 : Transcriptional activator, plants
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 11.5, cyto_nucl 7, extr_plas 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001324)
HIX0001324
HIT000561569 (
NM_001146039
)
(RAB6-interacting golgin isoform b precursor.)
genome : 170,501,263 - 170,514,928 (13,666)
query : 1 - 1,706 (1,706/1,718)
4 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, extr 5, cyto 3, pero 2, E.R._mito 2,
cyto_golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001324)
HIX0001324
HIT000349043 (
ENST00000367763
)
(RAB6-interacting golgin; N-terminal kinase-like-binding protein 1; NTKL-BP1; NTKL-binding protein 1; hNTKL-BP1; SCY1-like 1-binding protein 1; SCYL1-BP1; SCYL1-binding protein 1;)
genome : 170,501,270 - 170,522,587 (21,318)
query : 1 - 2,189 (2,189/2,189)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 9, cyto 9, cyto_nucl 9, E.R._mito 5, cyto_golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001324)
HIX0001324
HIT000005088
(
AK021814
)
(RAB6-interacting golgin; N-terminal kinase-like-binding protein 1; NTKL-BP1; NTKL-binding protein 1; hNTKL-BP1; SCY1-like 1-binding protein 1; SCYL1-BP1; SCYL1-binding protein 1;)
genome : 170,501,270 - 170,522,584 (21,315)
query : 1 - 2,186 (2,186/2,186)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;0.986;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, cyto 8, E.R._mito 5, cyto_pero 5, mito 3.5,
E.R. 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001324)
HIX0001324
HIT000261652
(
BC064945
)
Representative transcript
(RAB6-interacting golgin isoform b precursor.)
genome : 170,501,272 - 170,514,928 (13,657)
query : 1 - 1,697 (1,697/1,717)
4 exons
identity = 0.999
5'(0.994;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR007033 : Transcriptional activator, plants
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, extr 5, cyto 3, pero 2, E.R._mito 2,
cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001324)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173652
Mus
sp. (Mouse) : AK170455
Danio
sp. (Zebrafish) : BC053289
Bos
sp. (Cow) : BC142523
Gallus
sp. (Chicken) : CR407171
Tetraodon
sp. (Tetraodon) : CR732521
Oryzias
sp. (Medaka) : ENSORLT00000016870
Pongo
sp. (Orangutan) : ENSPPYT00000000629
Takifugu
sp. (Fugu) : SINFRUT00000147924
Pan
sp. (Chimpanzee) : XM_001140732
Monodelphis
sp. (Opossum) : XM_001372632
Canis
sp. (Dog) : XM_547470
Equus
sp. (Horse) : XR_035940
HIX0001324
HIT000349042 (
ENST00000367762
)
(RAB6-interacting golgin isoform b precursor.)
genome : 170,501,272 - 170,514,930 (13,659)
query : 1 - 1,699 (1,699/1,699)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, extr 5, cyto 3, pero 2, E.R._mito 2,
cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001324)
HIX0001324
HIT000098609
(
BC047476
)
(RAB6-interacting golgin isoform b precursor.)
genome : 170,501,292 - 170,522,585 (21,294)
query : 1 - 2,465 (2,465/2,475)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;0.997;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR007033 : Transcriptional activator, plants
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001324)
HIX0001324
HIT000601401 (
ENST00000498166
)
(RAB6-interacting golgin; N-terminal kinase-like-binding protein 1; NTKL-BP1; NTKL-binding protein 1; hNTKL-BP1; SCY1-like 1-binding protein 1; SCYL1-BP1; SCYL1-binding protein 1;)
genome : 170,501,292 - 170,522,587 (21,296)
query : 1 - 2,467 (2,467/2,467)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001324)
HIX0001324
HIT000014269
(
AK057661
)
(RAB6-interacting golgin; N-terminal kinase-like-binding protein 1; NTKL-BP1; NTKL-binding protein 1; mNTKL-BP1; SCY1-like 1-binding protein 1; SCYL1-BP1; SCYL1-binding protein 1;)
genome : 170,501,313 - 170,522,974 (21,662)
query : 1 - 2,392 (2,392/2,392)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;0.992;0.998)3'
coverage = 1.000
InterPro :
IPR007033 : Transcriptional activator, plants
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, cyto_nucl 14.3333, cyto_plas 14.3333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001324)
HIX0001324
HIT000570403 (
ENST00000465717
)
(RAB6-interacting golgin; N-terminal kinase-like-binding protein 1; NTKL-BP1; NTKL-binding protein 1; hNTKL-BP1; SCY1-like 1-binding protein 1; SCYL1-BP1; SCYL1-binding protein 1;)
genome : 170,505,416 - 170,508,800 (3,385)
query : 1 - 597 (597/597)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001324)
HIX0001324
HIT000094206
(
BC035999
)
(RAB6-interacting golgin isoform b precursor.)
genome : 170,508,203 - 170,522,583 (14,381)
query : 1 - 2,181 (2,181/2,208)
4 exons
identity = 0.999
5'(0.998;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR007033 : Transcriptional activator, plants
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001324)
HIX0001324
HIT000601815 (
ENST00000498600
)
(RAB6-interacting golgin; N-terminal kinase-like-binding protein 1; NTKL-BP1; NTKL-binding protein 1; hNTKL-BP1; SCY1-like 1-binding protein 1; SCYL1-BP1; SCYL1-binding protein 1;)
genome : 170,508,203 - 170,522,587 (14,385)
query : 1 - 2,185 (2,185/2,185)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 10, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001324)
HIX0001324
HIT000579371 (
ENST00000475113
)
(RAB6-interacting golgin; N-terminal kinase-like-binding protein 1; NTKL-BP1; NTKL-binding protein 1; hNTKL-BP1; SCY1-like 1-binding protein 1; SCYL1-BP1; SCYL1-binding protein 1;)
genome : 170,513,781 - 170,521,417 (7,637)
query : 1 - 468 (468/468)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, mito 9, nucl 6, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001324)
HIX0001324
HIT000071266
(
AF143889
)
(RAB6-interacting golgin isoform b precursor.)
genome : 170,513,827 - 170,521,699 (7,873)
query : 1 - 704 (704/722)
2 exons
identity = 0.997
5'(1.000;0.996)3'
coverage = 1.000
InterPro :
IPR007033 : Transcriptional activator, plants
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12.5, nucl 7.5, mito 6, extr 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001324)
HIX0160630
HIT000524024 (
ENST00000426090
)
(Non-protein coding transcript.)
genome : 170,556,390 - 170,557,377 (988)
query : 1 - 130 (130/130)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160630)
HIX0021635
HIT000012681
(
AK056067
)
Representative transcript
(Conserved hypothetical protein.)
genome : 170,567,995 - 170,616,480 (48,486)
query : 1 - 1,923 (1,923/1,923)
3 exons
identity = 0.997
5'(1.000;0.997;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021635)
HIX0021635
HIT000510939 (
ENST00000413005
)
(Conserved hypothetical protein.)
genome : 170,567,995 - 170,616,480 (48,486)
query : 1 - 1,923 (1,923/1,923)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 10.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021635)
HIX0028796
HIT000667157 (
ENST00000553786
)
(Paired mesoderm homeobox protein 1; Homeobox protein PHOX1; Paired-related homeobox protein 1; PRX-1;)
genome : 170,631,869 - 170,689,044 (57,176)
query : 1 - 529 (529/529)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 16, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028796)
HIX0028796
HIT000349040 (
ENST00000367760
)
(Paired mesoderm homeobox protein 1; Homeobox protein PHOX1; Paired-related homeobox protein 1; PRX-1;)
genome : 170,632,275 - 170,705,649 (73,375)
query : 1 - 2,217 (2,217/2,217)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028796)
HIX0028796
HIT000385098
(
AK225968
)
Representative transcript
(Paired mesoderm homeobox protein 1; Homeobox protein PHOX1; Paired-related homeobox protein 1; PRX-1;)
genome : 170,632,303 - 170,705,330 (73,028)
query : 1 - 1,867 (1,867/1,886)
5 exons
identity = 0.998
5'(0.997;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028796)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK008428
Rattus
sp. (Rat) : AY730764
Danio
sp. (Zebrafish) : BC064671
Gallus
sp. (Chicken) : D13433
Equus
sp. (Horse) : ENSECAT00000008680
Gallus
sp. (Chicken) : ENSGALT00000036107
Monodelphis
sp. (Opossum) : ENSMODT00000004471
Oryzias
sp. (Medaka) : ENSORLT00000016859
Pongo
sp. (Orangutan) : ENSPPYT00000000628
Tetraodon
sp. (Tetraodon) : GSTENT00010051001
Macaca
sp. (Macaque) : XM_001097278
Pan
sp. (Chimpanzee) : XM_001141191
Canis
sp. (Dog) : XM_857118
HIX0028796
HIT000104971 (
ENST00000239461
)
(Paired mesoderm homeobox protein 1; Homeobox protein PHOX1; Paired-related homeobox protein 1; PRX-1;)
genome : 170,633,047 - 170,708,560 (75,514)
query : 1 - 4,284 (4,284/4,284)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028796)
HIX0028796
HIT000600515 (
ENST00000497230
)
(Paired mesoderm homeobox protein 1; Homeobox protein PHOX1; Paired-related homeobox protein 1; PRX-1;)
genome : 170,633,078 - 170,698,162 (65,085)
query : 1 - 3,501 (3,501/3,501)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028796)
HIX0028796
HIT000203467 (
NM_006902
)
(Paired mesoderm homeobox protein 1; Homeobox protein PHOX1; Paired-related homeobox protein 1; PRX-1;)
genome : 170,633,313 - 170,708,541 (75,229)
query : 1 - 4,071 (4,071/4,071)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028796)
HIX0028796
HIT000208808 (
NM_022716
)
(Paired mesoderm homeobox protein 1; Homeobox protein PHOX1; Paired-related homeobox protein 1; PRX-1;)
genome : 170,633,313 - 170,708,541 (75,229)
query : 1 - 3,999 (3,999/3,999)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028796)
HIX0028796
HIT000265500
(
BC074993
)
(Paired mesoderm homeobox protein 1; Homeobox protein PHOX1; Paired-related homeobox protein 1; PRX-1;)
genome : 170,633,313 - 170,705,371 (72,059)
query : 1 - 829 (829/829)
4 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003654 : OAR domain
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028796)
HIX0028796
HIT000487676
(
AB451463
)
(Paired mesoderm homeobox protein 1; Homeobox protein PHOX1; Paired-related homeobox protein 1; PRX-1;)
genome : 170,633,360 - 170,705,324 (71,965)
query : 1 - 735 (735/735)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003654 : OAR domain
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028796)
HIX0023832
HIT000049982
(
AK130711
)
Representative transcript
(Conserved hypothetical protein.)
genome : 170,636,522 - 170,638,566 (2,045)
query : 1 - 2,045 (2,045/2,045)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10, mito 7, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023832)
HIX0029004
HIT000067279
(
AF086400
)
Representative transcript
(Conserved hypothetical protein.)
genome : 170,675,826 - 170,676,551 (726)
query : 1 - 726 (726/735)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, extr 8, nucl 8, cyto_nucl 7.5, cyto 5,
E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029004)
HIX0028796
HIT000581040 (
ENST00000476867
)
(Paired mesoderm homeobox protein 1; Homeobox protein PHOX1; Paired-related homeobox protein 1; PRX-1;)
genome : 170,691,758 - 170,705,540 (13,783)
query : 1 - 586 (586/586)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 9.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028796)
HIX0028796
HIT000598649 (
ENST00000495280
)
(Paired mesoderm homeobox protein 1; Homeobox protein PHOX1; Paired-related homeobox protein 1; PRX-1;)
genome : 170,691,786 - 170,705,374 (13,589)
query : 1 - 464 (464/464)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 9.5, cyto_nucl 7.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028796)
HIX0028796
HIT000589328 (
ENST00000485529
)
(Paired mesoderm homeobox protein 1; Homeobox protein PHOX1; Paired-related homeobox protein 1; PRX-1;)
genome : 170,699,347 - 170,705,374 (6,028)
query : 1 - 329 (329/329)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 7, nucl 4.5, cyto_nucl 3.5,
extr_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028796)
HIX0028796
HIT000599887 (
ENST00000496573
)
(Paired mesoderm homeobox protein 1; Homeobox protein PHOX1; Paired-related homeobox protein 1; PRX-1;)
genome : 170,699,587 - 170,705,374 (5,788)
query : 1 - 362 (362/362)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9.83333, nucl 9.5, extr 9, cyto 7, mito 5,
cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028796)
Z99758.8
169200001-169301902 F +
NCBI
AL356852.11
169301903-169356650 F +
NCBI
AL021068.2
169356651-169456224 F -
NCBI
Z99572.1
169456225-169562691 F +
NCBI
AL022146.1
169562692-169640616 F -
NCBI
AL021940.1
169640617-169782105 F +
NCBI
AL031297.4
169782106-169885186 F -
NCBI
AL445191.4
169885187-169888963 F +
NCBI
AL121714.33
169888964-169975741 F +
NCBI
AL356475.11
169975742-170083788 F +
NCBI
AL162428.17
170083789-170085782 F +
NCBI
AL445203.23
170085783-170258225 F +
NCBI
AL354699.11
170258226-170337708 F +
NCBI
AL354732.30
170337709-170474951 F +
NCBI
AL162399.12
170474952-170564590 F +
NCBI
AL023495.1
170564591-170590575 F +
NCBI
Z97200.1
170590576-170749024 F -
NCBI
AL031285.1
170749025-170800000 F +
NCBI