bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0160381
HIT000514845 (
ENST00000416911
)
(Cytochrome c oxidase, subunit Vb family protein.)
genome : 179,224,868 - 179,225,216 (349)
query : 1 - 349 (349/349)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160381)
HIX0160640
HIT000524293 (
ENST00000426359
)
(Ribosomal protein L39e family protein.)
genome : 179,240,251 - 179,240,401 (151)
query : 1 - 151 (151/151)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto_nucl 4.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160640)
HIX0199851
HIT000199965 (
NM_003101
)
(Sterol O-acyltransferase 1; EC=2.3.1.26; Acyl-coenzyme A:cholesterol acyltransferase 1; ACAT-1; Cholesterol acyltransferase 1;)
genome : 179,262,849 - 179,327,813 (64,965)
query : 1 - 6,921 (6,921/6,938)
16 exons
identity = 0.999
5'(1.000;1.000;0.968;0.974;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.26
KEGG pathway :
00100 : Steroid biosynthesis (20)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199851)
HIX0199851
HIT000723321 (
NM_001252511
)
(Sterol O-acyltransferase 1 isoform 2.)
genome : 179,262,849 - 179,327,813 (64,965)
query : 1 - 6,862 (6,862/6,879)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.26
KEGG pathway :
00100 : Steroid biosynthesis (20)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199851)
HIX0199851
HIT000723322 (
NM_001252512
)
(Sterol O-acyltransferase 1 isoform 3.)
genome : 179,262,849 - 179,327,813 (64,965)
query : 1 - 6,795 (6,795/6,812)
15 exons
identity = 0.999
5'(1.000;0.968;0.974;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.26
KEGG pathway :
00100 : Steroid biosynthesis (20)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199851)
HIX0199851
HIT000726330 (
NR_045530
)
(Sterol O-acyltransferase 1 isoform 3.)
genome : 179,262,849 - 179,327,813 (64,965)
query : 1 - 6,840 (6,840/6,857)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.26
KEGG pathway :
00100 : Steroid biosynthesis (20)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20, lyso 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199851)
HIX0199851
HIT000495175
(
AK300551
)
(Sterol O-acyltransferase 1 isoform 3.)
genome : 179,262,925 - 179,322,942 (60,018)
query : 1 - 1,848 (1,848/1,848)
15 exons
identity = 0.996
5'(1.000;0.968;0.974;1.000;1.000;0.996;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.26
KEGG pathway :
00100 : Steroid biosynthesis (20)
InterPro :
IPR004299 : Membrane bound O-acyl transferase, MBOAT
IPR014371 : Sterol O-acyltransferase, ACAT/DAG/ARE types
GO :
0008374 : Molecular Function : O-acyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199851)
HIX0199851
HIT000638933 (
ENST00000539888
)
(Sterol O-acyltransferase 1 isoform 3.)
genome : 179,262,925 - 179,322,942 (60,018)
query : 1 - 1,848 (1,848/1,848)
15 exons
identity = 0.997
5'(1.000;0.968;0.974;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.26
KEGG pathway :
00100 : Steroid biosynthesis (20)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199851)
HIX0199851
HIT000423456
(
AK290659
)
(Sterol O-acyltransferase 1 isoform 2.)
genome : 179,262,932 - 179,323,138 (60,207)
query : 1 - 2,104 (2,104/2,104)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.990;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.26
KEGG pathway :
00100 : Steroid biosynthesis (20)
InterPro :
IPR004299 : Membrane bound O-acyl transferase, MBOAT
IPR014371 : Sterol O-acyltransferase, ACAT/DAG/ARE types
GO :
0008374 : Molecular Function : O-acyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199851)
HIX0199851
HIT000639609 (
ENST00000540564
)
(Sterol O-acyltransferase 1 isoform 2.)
genome : 179,262,932 - 179,323,138 (60,207)
query : 1 - 2,104 (2,104/2,104)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.26
KEGG pathway :
00100 : Steroid biosynthesis (20)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199851)
HIX0199851
HIT000488671
(
AK294047
)
(Sterol O-acyltransferase 1 isoform 3.)
genome : 179,262,932 - 179,322,997 (60,066)
query : 1 - 1,941 (1,941/1,941)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.26
KEGG pathway :
00100 : Steroid biosynthesis (20)
InterPro :
IPR004299 : Membrane bound O-acyl transferase, MBOAT
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20, lyso 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199851)
HIX0199851
HIT000634731 (
ENST00000535686
)
(Sterol O-acyltransferase 1 isoform 3.)
genome : 179,262,932 - 179,322,997 (60,066)
query : 1 - 1,941 (1,941/1,941)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.26
KEGG pathway :
00100 : Steroid biosynthesis (20)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20, lyso 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199851)
HIX0199851
HIT000348899 (
ENST00000367619
)
(Sterol O-acyltransferase 1; EC=2.3.1.26; Acyl-coenzyme A:cholesterol acyltransferase 1; ACAT-1; Cholesterol acyltransferase 1;)
genome : 179,262,937 - 179,327,815 (64,879)
query : 1 - 6,835 (6,835/6,835)
16 exons
identity = 0.999
5'(1.000;1.000;0.968;0.974;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.26
KEGG pathway :
00100 : Steroid biosynthesis (20)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199851)
HIX0199851
HIT000009885
(
AK026611
)
(Sterol O-acyltransferase 1; EC=2.3.1.26; Acyl-coenzyme A:cholesterol acyltransferase 1; ACAT-1; Cholesterol acyltransferase 1;)
genome : 179,262,937 - 179,323,710 (60,774)
query : 1 - 2,730 (2,730/2,746)
16 exons
identity = 0.996
5'(0.993;1.000;0.968;0.974;1.000;0.991;0.993;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.3.1.26
KEGG pathway :
00100 : Steroid biosynthesis (20)
InterPro :
IPR004299 : Membrane bound O-acyl transferase, MBOAT
IPR014371 : Sterol O-acyltransferase, ACAT/DAG/ARE types
GO :
0008374 : Molecular Function : O-acyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199851)
HIX0199851
HIT000028537
(
AL833625
)
(Sterol O-acyltransferase 1 isoform 2.)
genome : 179,262,945 - 179,324,451 (61,507)
query : 2 - 3,405 (3,404/3,425)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.996;1.000;
0.988;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 0.999
EC number :
EC 2.3.1.26
KEGG pathway :
00100 : Steroid biosynthesis (20)
InterPro :
IPR004299 : Membrane bound O-acyl transferase, MBOAT
IPR014371 : Sterol O-acyltransferase, ACAT/DAG/ARE types
GO :
0008374 : Molecular Function : O-acyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199851)
HIX0199851
HIT000040651
(
BC028940
)
Representative transcript
(Sterol O-acyltransferase 1; EC=2.3.1.26; Acyl-coenzyme A:cholesterol acyltransferase 1; ACAT-1; Cholesterol acyltransferase 1;)
genome : 179,263,017 - 179,324,453 (61,437)
query : 1 - 3,393 (3,393/3,407)
16 exons
identity = 0.997
5'(1.000;1.000;0.968;0.974;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.3.1.26
KEGG pathway :
00100 : Steroid biosynthesis (20)
InterPro :
IPR004299 : Membrane bound O-acyl transferase, MBOAT
IPR014371 : Sterol O-acyltransferase, ACAT/DAG/ARE types
GO :
0008374 : Molecular Function : O-acyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199851)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168948
Pongo
sp. (Orangutan) : AF354623
Mus
sp. (Mouse) : AK142486
Bos
sp. (Cow) : BC102315
Rattus
sp. (Rat) : D86373
Equus
sp. (Horse) : ENSECAT00000008522
Oryzias
sp. (Medaka) : ENSORLT00000021566
Tetraodon
sp. (Tetraodon) : GSTENT00013578001
Takifugu
sp. (Fugu) : SINFRUT00000178882
Monodelphis
sp. (Opossum) : XM_001374101
Danio
sp. (Zebrafish) : XM_001921364
Pan
sp. (Chimpanzee) : XM_514030
Canis
sp. (Dog) : XM_547445
Danio
sp. (Zebrafish) : XM_687763
HIX0199851
HIT000524890 (
ENST00000426956
)
(Sterol O-acyltransferase 1; EC=2.3.1.26; Acyl-coenzyme A:cholesterol acyltransferase 1; ACAT-1; Cholesterol acyltransferase 1;)
genome : 179,263,455 - 179,310,445 (46,991)
query : 1 - 870 (870/870)
7 exons
identity = 0.993
5'(1.000;1.000;0.968;0.974;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.26
KEGG pathway :
00100 : Steroid biosynthesis (20)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199851)
HIX0199851
HIT000500014
(
AK316401
)
(Sterol O-acyltransferase 1; EC=2.3.1.26; Acyl-coenzyme A:cholesterol acyltransferase 1; ACAT-1; Cholesterol acyltransferase 1;)
genome : 179,281,771 - 179,322,924 (41,154)
query : 1 - 1,735 (1,735/1,735)
15 exons
identity = 0.995
5'(1.000;0.968;0.974;1.000;0.991;1.000;1.000;
1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.26
KEGG pathway :
00100 : Steroid biosynthesis (20)
InterPro :
IPR004299 : Membrane bound O-acyl transferase, MBOAT
IPR014371 : Sterol O-acyltransferase, ACAT/DAG/ARE types
GO :
0008374 : Molecular Function : O-acyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199851)
HIX0199851
HIT000429786
(
AK310920
)
(Sterol O-acyltransferase 1; EC=2.3.1.26; Acyl-coenzyme A:cholesterol acyltransferase 1; ACAT-1; Cholesterol acyltransferase 1;)
genome : 179,292,594 - 179,322,814 (30,221)
query : 1 - 1,714 (1,714/1,714)
14 exons
identity = 0.999
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.26
KEGG pathway :
00100 : Steroid biosynthesis (20)
InterPro :
IPR004299 : Membrane bound O-acyl transferase, MBOAT
IPR014371 : Sterol O-acyltransferase, ACAT/DAG/ARE types
GO :
0008374 : Molecular Function : O-acyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199851)
HIX0214291
HIT000689297 (
ENST00000577343
)
(Conserved hypothetical protein.)
genome : 179,333,448 - 179,333,743 (296)
query : 1 - 296 (296/296)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214291)
HIX0018293
HIT000609056 (
ENST00000509175
)
(Conserved hypothetical protein.)
genome : 179,334,855 - 179,348,617 (13,763)
query : 1 - 765 (765/765)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13.5, nucl 12.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018293)
HIX0018293
HIT000607380 (
ENST00000507383
)
(Conserved hypothetical protein.)
genome : 179,334,861 - 179,339,214 (4,354)
query : 1 - 534 (534/534)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, mito 4, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018293)
HIX0018293
HIT000608168 (
ENST00000508229
)
(Conserved hypothetical protein.)
genome : 179,334,873 - 179,338,073 (3,201)
query : 1 - 586 (586/586)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018293)
HIX0018293
HIT000497596
(
AK302972
)
Representative transcript
(Axonemal dynein light chain domain-containing protein 1.)
genome : 179,334,876 - 179,460,786 (125,911)
query : 1 - 2,714 (2,714/2,714)
20 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;0.996;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019347 : Axonemal dynein light chain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018293)
HIX0018293
HIT000555172 (
ENST00000457238
)
(Axonemal dynein light chain family protein.)
genome : 179,334,876 - 179,460,786 (125,911)
query : 1 - 2,714 (2,714/2,714)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018293)
HIX0018293
HIT000610373 (
ENST00000510593
)
(Conserved hypothetical protein.)
genome : 179,335,107 - 179,354,437 (19,331)
query : 1 - 576 (576/576)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.5, nucl 8.5, plas 2, extr 2,
mito 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018293)
HIX0018293
HIT000611581 (
ENST00000511889
)
(Conserved hypothetical protein.)
genome : 179,335,107 - 179,347,892 (12,786)
query : 1 - 553 (553/553)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 11, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018293)
HIX0018293
HIT000608222 (
ENST00000508285
)
(Conserved hypothetical protein.)
genome : 179,335,107 - 179,339,214 (4,108)
query : 1 - 510 (510/510)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018293)
HIX0018293
HIT000014116
(
AK057502
)
(Axonemal dynein light chain domain-containing protein 1.)
genome : 179,335,112 - 179,437,852 (102,741)
query : 1 - 1,970 (1,970/1,970)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996)3'
coverage = 1.000
InterPro :
IPR019347 : Axonemal dynein light chain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.3333, cyto_golg 11.6667,
nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018293)
HIX0018293
HIT000566080 (
ENST00000461179
)
(Axonemal dynein light chain family protein.)
genome : 179,335,112 - 179,437,852 (102,741)
query : 1 - 1,970 (1,970/1,970)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.3333, cyto_golg 11.6667,
nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018293)
HIX0159765
HIT000552801 (
ENST00000454867
)
(Holliday junction regulator protein family C-terminal domain containing protein.)
genome : 179,416,713 - 179,417,575 (863)
query : 1 - 863 (863/863)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 13.5, cyto 9, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159765)
HIX0159765
HIT000509791 (
ENST00000411857
)
(Conserved hypothetical protein.)
genome : 179,416,737 - 179,426,450 (9,714)
query : 1 - 9,714 (9,714/9,714)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 7.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159765)
HIX0214332
HIT000712324 (
ENST00000600581
)
(Non-protein coding transcript.)
genome : 179,443,716 - 179,457,805 (14,090)
query : 1 - 129 (129/129)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214332)
HIX0213751
HIT000588712 (
ENST00000484883
)
(Conserved hypothetical protein.)
genome : 179,460,838 - 179,523,870 (63,033)
query : 1 - 1,134 (1,134/1,134)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17.5, extr 10, mito_pero 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213751)
HIX0213751
HIT000014773
(
AK058167
)
Representative transcript
(Axonemal dynein light chain domain-containing protein 1.)
genome : 179,460,838 - 179,523,868 (63,031)
query : 1 - 1,132 (1,132/1,132)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17.5, extr 10, mito_pero 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213751)
HIX0213751
HIT000588305 (
ENST00000484455
)
(Conserved hypothetical protein.)
genome : 179,503,628 - 179,523,848 (20,221)
query : 1 - 672 (672/672)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213751)
HIX0199998
HIT000045949
(
AK126076
)
Representative transcript
(Conserved hypothetical protein.)
genome : 179,512,336 - 179,518,057 (5,722)
query : 1 - 3,294 (3,294/3,294)
2 exons
identity = 0.998
3'(0.999;0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 8, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199998)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001157553
HIX0199998
HIT000682580 (
ENST00000569644
)
(Conserved hypothetical protein.)
genome : 179,512,336 - 179,518,057 (5,722)
query : 1 - 3,294 (3,294/3,294)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199998)
HIX0001377
HIT000040693
(
BC029141
)
(Podocin;)
genome : 179,519,675 - 179,545,087 (25,413)
query : 1 - 1,669 (1,669/1,692)
7 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;1.000;0.990;0.997)5'
coverage = 1.000
InterPro :
IPR001107 : Band 7 protein
IPR001972 : Stomatin family
IPR028509 : Podocin
GO :
0005887 : Cellular Component : integral component of plasma membrane
0007588 : Biological Process : excretion
0016020 : Cellular Component : membrane
0031532 : Biological Process : actin cytoskeleton reorganization
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 13, cyto_nucl 11.5, plas 6, cyto 6, pero 3,
extr_plas 3, cysk_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001377)
HIX0001377
HIT000204948 (
NM_014625
)
(Podocin;)
genome : 179,519,675 - 179,545,084 (25,410)
query : 1 - 1,870 (1,870/1,893)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 13, cyto_nucl 11.5, plas 6, cyto 6, pero 3,
extr_plas 3, cysk_plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001377)
HIX0001377
HIT000348896 (
ENST00000367616
)
(Podocin;)
genome : 179,519,674 - 179,545,087 (25,414)
query : 1 - 1,670 (1,670/1,670)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 13, cyto_nucl 11.5, plas 6, cyto 6, pero 3,
extr_plas 3, cysk_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001377)
HIX0001377
HIT000348895 (
ENST00000367615
)
(Podocin;)
genome : 179,519,674 - 179,545,068 (25,395)
query : 1 - 1,855 (1,855/1,855)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 13, cyto_nucl 11.5, plas 6, cyto 6, pero 3,
extr_plas 3, cysk_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001377)
HIX0001377
HIT000246492
(
AJ279254
)
Representative transcript
(Podocin;)
genome : 179,519,676 - 179,545,068 (25,393)
query : 1 - 1,853 (1,853/1,853)
8 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
0.994)5'
coverage = 1.000
InterPro :
IPR001107 : Band 7 protein
IPR001972 : Stomatin family
IPR018080 : Band 7/stomatin-like, conserved site
IPR028509 : Podocin
GO :
0005887 : Cellular Component : integral component of plasma membrane
0007588 : Biological Process : excretion
0016020 : Cellular Component : membrane
0031532 : Biological Process : actin cytoskeleton reorganization
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 13, cyto_nucl 11.5, plas 6, cyto 6, pero 3,
extr_plas 3, cysk_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001377)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC067401
Rattus
sp. (Rat) : BC081687
Danio
sp. (Zebrafish) : BC133976
Bos
sp. (Cow) : ENSBTAT00000002806
Equus
sp. (Horse) : ENSECAT00000009663
Gallus
sp. (Chicken) : ENSGALT00000006621
Macaca
sp. (Macaque) : ENSMMUT00000005336
Oryzias
sp. (Medaka) : ENSORLT00000003925
Pongo
sp. (Orangutan) : ENSPPYT00000000550
Pan
sp. (Chimpanzee) : ENSPTRT00000003138
Tetraodon
sp. (Tetraodon) : GSTENT00035218001
Takifugu
sp. (Fugu) : SINFRUT00000181288
Monodelphis
sp. (Opossum) : XM_001374160
Canis
sp. (Dog) : XM_547443
HIX0213751
HIT000018327
(
AK093460
)
(Podocin;)
genome : 179,520,202 - 179,523,868 (3,667)
query : 1 - 1,857 (1,857/1,857)
2 exons
identity = 0.998
5'(0.998;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 7, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213751)
HIX0213751
HIT000592696 (
ENST00000489080
)
(Conserved hypothetical protein.)
genome : 179,520,202 - 179,523,868 (3,667)
query : 1 - 1,857 (1,857/1,857)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213751)
HIX0116796
HIT000450706
(
DQ584175
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,551,765 - 179,551,796 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116796)
HIX0178280
HIT000525149 (
ENST00000427215
)
(Small GTPase superfamily protein.)
genome : 179,555,840 - 179,558,310 (2,471)
query : 1 - 2,471 (2,471/2,471)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 12, nucl 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178280)
HIX0178280
pHIT000098694 ( pHIT000098694 )
Representative transcript
(Conserved hypothetical protein.)
genome : 179,555,840 - 179,558,251 (2,412)
query : 1 - 1,755 (1,755/1,755)
4 exons
InterPro :
IPR001164 : Arf GTPase activating protein
IPR001806 : Small GTPase superfamily
IPR001849 : Pleckstrin homology domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178280)
CAGE tag :
T01R0A9AB852
Ortholog candidate ( ->
Evola
)
Oryzias
sp. (Medaka) : ENSORLT00000019096
Tetraodon
sp. (Tetraodon) : GSTENT00033817001
Takifugu
sp. (Fugu) : SINFRUT00000167156
Macaca
sp. (Macaque) : XM_001111865
Equus
sp. (Horse) : XM_001915910
Danio
sp. (Zebrafish) : XM_001921491
Canis
sp. (Dog) : XM_843373
HIX0148999
HIT000441475
(
DQ574944
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,556,000 - 179,556,030 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148999)
HIX0116184
HIT000444972
(
DQ578441
)
(Non-protein coding transcript.)
genome : 179,556,051 - 179,556,081 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116184)
HIX0116184
HIT000444198
(
DQ577667
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,556,053 - 179,556,083 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116184)
HIX0116527
HIT000440905
(
DQ574374
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,556,136 - 179,556,165 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116527)
HIX0116156
HIT000461902
(
DQ595371
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,556,207 - 179,556,237 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116156)
HIX0116156
HIT000438518
(
DQ571987
)
(Non-protein coding transcript.)
genome : 179,556,211 - 179,556,240 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116156)
HIX0116156
HIT000459221
(
DQ592690
)
(Non-protein coding transcript.)
genome : 179,556,211 - 179,556,240 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116156)
HIX0116189
HIT000446278
(
DQ579747
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,556,284 - 179,556,314 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116189)
HIX0116189
HIT000446277
(
DQ579746
)
(Non-protein coding transcript.)
genome : 179,556,285 - 179,556,314 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116189)
HIX0116519
HIT000440279
(
DQ573748
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,556,343 - 179,556,372 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116519)
HIX0116571
HIT000442970
(
DQ576439
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,556,388 - 179,556,417 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116571)
HIX0149083
HIT000458172
(
DQ591641
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,556,493 - 179,556,522 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0149083)
HIX0148825
HIT000467214
(
DQ600683
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,556,524 - 179,556,554 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148825)
HIX0148825
HIT000466824
(
DQ600293
)
(Non-protein coding transcript.)
genome : 179,556,534 - 179,556,563 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148825)
HIX0148825
HIT000438517
(
DQ571986
)
(Non-protein coding transcript.)
genome : 179,556,550 - 179,556,579 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148825)
HIX0148841
HIT000452820
(
DQ586289
)
(Non-protein coding transcript.)
genome : 179,556,658 - 179,556,686 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148841)
HIX0148841
HIT000445420
(
DQ578889
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,556,661 - 179,556,691 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148841)
HIX0148841
HIT000445419
(
DQ578888
)
(Non-protein coding transcript.)
genome : 179,556,662 - 179,556,691 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148841)
HIX0148841
HIT000446268
(
DQ579737
)
(Non-protein coding transcript.)
genome : 179,556,671 - 179,556,701 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148841)
HIX0148841
HIT000446919
(
DQ580388
)
(Non-protein coding transcript.)
genome : 179,556,689 - 179,556,718 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148841)
HIX0148841
HIT000446920
(
DQ580389
)
(Non-protein coding transcript.)
genome : 179,556,690 - 179,556,718 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148841)
HIX0148841
HIT000444988
(
DQ578457
)
(Non-protein coding transcript.)
genome : 179,556,709 - 179,556,738 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148841)
HIX0148841
HIT000467083
(
DQ600552
)
(Non-protein coding transcript.)
genome : 179,556,712 - 179,556,741 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148841)
HIX0116546
HIT000441596
(
DQ575065
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,556,747 - 179,556,776 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116546)
HIX0116154
HIT000451303
(
DQ584772
)
(Non-protein coding transcript.)
genome : 179,556,777 - 179,556,806 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116154)
HIX0116154
HIT000450834
(
DQ584303
)
(Non-protein coding transcript.)
genome : 179,556,798 - 179,556,827 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116154)
HIX0116154
HIT000439201
(
DQ572670
)
(Non-protein coding transcript.)
genome : 179,556,806 - 179,556,836 (31)
query : 1 - 31 (31/31)
1 exon
identity = 0.968
3'(0.968)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116154)
HIX0116154
HIT000439203
(
DQ572672
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,556,806 - 179,556,836 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116154)
HIX0116154
HIT000438430
(
DQ571899
)
(Non-protein coding transcript.)
genome : 179,556,806 - 179,556,835 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116154)
HIX0116154
HIT000439202
(
DQ572671
)
(Non-protein coding transcript.)
genome : 179,556,807 - 179,556,836 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116154)
HIX0116154
HIT000460549
(
DQ594018
)
(Non-protein coding transcript.)
genome : 179,556,808 - 179,556,837 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116154)
HIX0116154
HIT000462272
(
DQ595741
)
(Non-protein coding transcript.)
genome : 179,556,811 - 179,556,841 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116154)
HIX0148851
HIT000468285
(
DQ601754
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,556,861 - 179,556,891 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148851)
HIX0148851
HIT000468286
(
DQ601755
)
(Non-protein coding transcript.)
genome : 179,556,863 - 179,556,891 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148851)
HIX0149109
HIT000464742
(
DQ598211
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,556,956 - 179,556,985 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0149109)
HIX0148823
HIT000457162
(
DQ590631
)
(Non-protein coding transcript.)
genome : 179,557,000 - 179,557,028 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000462103
(
DQ595572
)
(Non-protein coding transcript.)
genome : 179,557,000 - 179,557,029 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000438347
(
DQ571816
)
(Non-protein coding transcript.)
genome : 179,557,001 - 179,557,030 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000468140
(
DQ601609
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,557,005 - 179,557,036 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000459177
(
DQ592646
)
(Non-protein coding transcript.)
genome : 179,557,006 - 179,557,036 (31)
query : 1 - 31 (31/31)
1 exon
identity = 0.968
3'(0.968)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000468141
(
DQ601610
)
(Non-protein coding transcript.)
genome : 179,557,007 - 179,557,036 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000468142
(
DQ601611
)
(Non-protein coding transcript.)
genome : 179,557,008 - 179,557,036 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000452803
(
DQ586272
)
(Non-protein coding transcript.)
genome : 179,557,015 - 179,557,044 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000465365
(
DQ598834
)
(Non-protein coding transcript.)
genome : 179,557,028 - 179,557,057 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000457188
(
DQ590657
)
(Non-protein coding transcript.)
genome : 179,557,030 - 179,557,059 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000465163
(
DQ598632
)
(Non-protein coding transcript.)
genome : 179,557,033 - 179,557,061 (29)
query : 2 - 30 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000447017
(
DQ580486
)
(Non-protein coding transcript.)
genome : 179,557,036 - 179,557,066 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000463096
(
DQ596565
)
(Non-protein coding transcript.)
genome : 179,557,035 - 179,557,065 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000447016
(
DQ580485
)
(Non-protein coding transcript.)
genome : 179,557,036 - 179,557,066 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000463095
(
DQ596564
)
(Non-protein coding transcript.)
genome : 179,557,036 - 179,557,065 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000464646
(
DQ598115
)
(Non-protein coding transcript.)
genome : 179,557,036 - 179,557,063 (28)
query : 3 - 30 (28/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000447015
(
DQ580484
)
(Non-protein coding transcript.)
genome : 179,557,037 - 179,557,066 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000461987
(
DQ595456
)
(Non-protein coding transcript.)
genome : 179,557,042 - 179,557,071 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000450016
(
DQ583485
)
(Non-protein coding transcript.)
genome : 179,557,064 - 179,557,093 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000446794
(
DQ580263
)
(Non-protein coding transcript.)
genome : 179,557,075 - 179,557,104 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000450670
(
DQ584139
)
(Non-protein coding transcript.)
genome : 179,557,083 - 179,557,111 (29)
query : 1 - 29 (29/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.935
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000438185
(
DQ571654
)
(Non-protein coding transcript.)
genome : 179,557,082 - 179,557,111 (30)
query : 2 - 31 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000450671
(
DQ584140
)
(Non-protein coding transcript.)
genome : 179,557,082 - 179,557,111 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000458800
(
DQ592269
)
(Non-protein coding transcript.)
genome : 179,557,109 - 179,557,139 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000460387
(
DQ593856
)
(Non-protein coding transcript.)
genome : 179,557,133 - 179,557,162 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000468043
(
DQ601512
)
(Non-protein coding transcript.)
genome : 179,557,140 - 179,557,170 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000453538
(
DQ587007
)
(Non-protein coding transcript.)
genome : 179,557,152 - 179,557,181 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000456241
(
DQ589710
)
(Non-protein coding transcript.)
genome : 179,557,152 - 179,557,181 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0148823
HIT000454668
(
DQ588137
)
(Non-protein coding transcript.)
genome : 179,557,158 - 179,557,187 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148823)
HIX0149080
HIT000457473
(
DQ590942
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,557,210 - 179,557,238 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0149080)
HIX0149058
HIT000453729
(
DQ587198
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,557,250 - 179,557,279 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0149058)
HIX0116157
HIT000438598
(
DQ572067
)
(Non-protein coding transcript.)
genome : 179,557,298 - 179,557,326 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116157)
HIX0116157
HIT000451439
(
DQ584908
)
(Non-protein coding transcript.)
genome : 179,557,301 - 179,557,330 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116157)
HIX0116157
HIT000440094
(
DQ573563
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,557,328 - 179,557,357 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116157)
HIX0148829
HIT000439145
(
DQ572614
)
(Non-protein coding transcript.)
genome : 179,557,404 - 179,557,432 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148829)
HIX0148829
HIT000439146
(
DQ572615
)
(Non-protein coding transcript.)
genome : 179,557,403 - 179,557,432 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148829)
HIX0148829
HIT000465121
(
DQ598590
)
(Non-protein coding transcript.)
genome : 179,557,408 - 179,557,438 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148829)
HIX0148829
HIT000465122_02
(
DQ598591
)
(Non-protein coding transcript.)
genome : 179,557,409 - 179,557,438 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148829)
HIX0148829
HIT000454753
(
DQ588222
)
(Non-protein coding transcript.)
genome : 179,557,408 - 179,557,437 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148829)
HIX0148829
HIT000454754_02
(
DQ588223
)
(Non-protein coding transcript.)
genome : 179,557,409 - 179,557,437 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148829)
HIX0148829
HIT000454755
(
DQ588224
)
(Non-protein coding transcript.)
genome : 179,557,408 - 179,557,437 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148829)
HIX0148829
HIT000443631
(
DQ577100
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,557,412 - 179,557,443 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148829)
HIX0148829
HIT000443630
(
DQ577099
)
(Non-protein coding transcript.)
genome : 179,557,414 - 179,557,443 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148829)
HIX0148836
HIT000443362
(
DQ576831
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,557,446 - 179,557,477 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148836)
HIX0148836
HIT000454386_03
(
DQ587855
)
(Non-protein coding transcript.)
genome : 179,557,465 - 179,557,494 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148836)
HIX0148840
HIT000452353
(
DQ585822
)
(Non-protein coding transcript.)
genome : 179,557,495 - 179,557,524 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148840)
HIX0148840
HIT000455214
(
DQ588683
)
(Non-protein coding transcript.)
genome : 179,557,511 - 179,557,540 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148840)
HIX0148840
HIT000455215
(
DQ588684
)
(Non-protein coding transcript.)
genome : 179,557,511 - 179,557,540 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148840)
HIX0148840
HIT000459902
(
DQ593371
)
(Non-protein coding transcript.)
genome : 179,557,511 - 179,557,539 (29)
query : 2 - 30 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148840)
HIX0148840
HIT000444637
(
DQ578106
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,557,525 - 179,557,554 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148840)
HIX0148822
HIT000438182
(
DQ571651
)
(Non-protein coding transcript.)
genome : 179,557,562 - 179,557,591 (30)
query : 2 - 31 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148822)
HIX0148822
HIT000450549
(
DQ584018
)
(Non-protein coding transcript.)
genome : 179,557,562 - 179,557,591 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148822)
HIX0148822
HIT000450550
(
DQ584019
)
(Non-protein coding transcript.)
genome : 179,557,563 - 179,557,591 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148822)
HIX0148822
HIT000442433
(
DQ575902
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,557,565 - 179,557,595 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148822)
HIX0148822
HIT000442431
(
DQ575900
)
(Non-protein coding transcript.)
genome : 179,557,567 - 179,557,595 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148822)
HIX0148822
HIT000442432
(
DQ575901
)
(Non-protein coding transcript.)
genome : 179,557,566 - 179,557,595 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148822)
HIX0148831
HIT000453924
(
DQ587393
)
(Non-protein coding transcript.)
genome : 179,557,657 - 179,557,686 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148831)
HIX0148831
HIT000440757
(
DQ574226
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,557,661 - 179,557,691 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148831)
HIX0148831
HIT000460831
(
DQ594300
)
(Non-protein coding transcript.)
genome : 179,557,663 - 179,557,692 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148831)
HIX0148831
HIT000456073
(
DQ589542
)
(Non-protein coding transcript.)
genome : 179,557,674 - 179,557,704 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148831)
HIX0148831
HIT000441240
(
DQ574709
)
(Non-protein coding transcript.)
genome : 179,557,704 - 179,557,734 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148831)
HIX0148831
HIT000457222
(
DQ590691
)
(Non-protein coding transcript.)
genome : 179,557,727 - 179,557,754 (28)
query : 3 - 30 (28/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148831)
HIX0148821
HIT000453710
(
DQ587179
)
(Non-protein coding transcript.)
genome : 179,557,815 - 179,557,844 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148821)
HIX0148821
HIT000462194
(
DQ595663
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,557,817 - 179,557,847 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148821)
HIX0148821
HIT000462193
(
DQ595662
)
(Non-protein coding transcript.)
genome : 179,557,818 - 179,557,847 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148821)
HIX0148821
HIT000438118
(
DQ571587
)
(Non-protein coding transcript.)
genome : 179,557,821 - 179,557,850 (30)
query : 2 - 31 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148821)
HIX0148821
HIT000443252
(
DQ576721
)
(Non-protein coding transcript.)
genome : 179,557,821 - 179,557,850 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148821)
HIX0148821
HIT000443184
(
DQ576653
)
(Non-protein coding transcript.)
genome : 179,557,831 - 179,557,860 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148821)
HIX0116185
HIT000444445
(
DQ577914
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,557,944 - 179,557,973 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116185)
HIX0116185
HIT000454410
(
DQ587879
)
(Non-protein coding transcript.)
genome : 179,557,951 - 179,557,979 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116185)
HIX0149101
HIT000463806
(
DQ597275
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,558,037 - 179,558,067 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0149101)
HIX0149121
HIT000466653
(
DQ600122
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,558,082 - 179,558,112 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0149121)
HIX0148848
HIT000459819
(
DQ593288
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,558,163 - 179,558,191 (29)
query : 2 - 30 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148848)
HIX0148848
HIT000466481
(
DQ599950
)
(Non-protein coding transcript.)
genome : 179,558,177 - 179,558,205 (29)
query : 3 - 31 (29/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.935
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148848)
HIX0149048
HIT000452144
(
DQ585613
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,558,568 - 179,558,597 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0149048)
HIX0148820
HIT000459064
(
DQ592533
)
(Non-protein coding transcript.)
genome : 179,558,660 - 179,558,689 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148820)
HIX0148820
HIT000456395
(
DQ589864
)
(Non-protein coding transcript.)
genome : 179,558,665 - 179,558,695 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148820)
HIX0148820
HIT000438108
(
DQ571577
)
(Non-protein coding transcript.)
genome : 179,558,671 - 179,558,701 (31)
query : 2 - 32 (31/32)
1 exon
identity = 0.968
3'(0.968)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148820)
HIX0148820
HIT000442361
(
DQ575830
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,558,671 - 179,558,701 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148820)
HIX0148820
HIT000459574
(
DQ593043
)
(Non-protein coding transcript.)
genome : 179,558,671 - 179,558,700 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148820)
HIX0116197
HIT000451027
(
DQ584496
)
(Non-protein coding transcript.)
genome : 179,558,711 - 179,558,741 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116197)
HIX0116197
HIT000451026
(
DQ584495
)
(Non-protein coding transcript.)
genome : 179,558,712 - 179,558,741 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116197)
HIX0116197
HIT000449570
(
DQ583039
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,558,718 - 179,558,748 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116197)
HIX0116197
HIT000458328
(
DQ591797
)
(Non-protein coding transcript.)
genome : 179,558,731 - 179,558,760 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116197)
HIX0116197
HIT000458329
(
DQ591798
)
(Non-protein coding transcript.)
genome : 179,558,732 - 179,558,760 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116197)
HIX0116600
HIT000444052
(
DQ577521
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,558,801 - 179,558,830 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116600)
HIX0160124
HIT000462124_03
(
DQ595593
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,558,807 - 179,558,838 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160124)
HIX0117194
HIT000466131
(
DQ599600
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,558,845 - 179,558,875 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117194)
HIX0148842
HIT000455410
(
DQ588879
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,558,976 - 179,559,006 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148842)
HIX0148842
HIT000445117
(
DQ578586
)
(Non-protein coding transcript.)
genome : 179,558,991 - 179,559,020 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148842)
HIX0116657
HIT000446062
(
DQ579531
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,559,026 - 179,559,055 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116657)
HIX0029253
HIT000094086
(
BC035790
)
Representative transcript
(Conserved hypothetical protein.)
genome : 179,559,507 - 179,560,440 (934)
query : 1 - 934 (934/1,000)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 5.66667, nucl 5, cyto 4,
cyto_pero 3.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029253)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_514031
HIX0029253
HIT000680170 (
ENST00000567150
)
(Hypothetical short protein.)
genome : 179,559,507 - 179,560,440 (934)
query : 1 - 934 (934/934)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 5.66667, nucl 5, cyto 4,
cyto_pero 3.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029253)
HIX0116145
HIT000437153
(
DQ570622
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,559,930 - 179,559,959 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116145)
HIX0116145
HIT000458951
(
DQ592420
)
(Non-protein coding transcript.)
genome : 179,559,936 - 179,559,965 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116145)
HIX0117222
HIT000467158
(
DQ600627
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,560,087 - 179,560,115 (29)
query : 3 - 31 (29/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.935
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117222)
HIX0001379
HIT000656425 (
NM_001199091
)
(Tudor domain-containing protein 5;)
genome : 179,560,748 - 179,660,406 (99,659)
query : 1 - 3,633 (3,633/3,677)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001379)
HIX0001379
HIT000046762
(
AK126889
)
(Tudor domain-containing protein 5;)
genome : 179,560,748 - 179,660,405 (99,658)
query : 1 - 3,632 (3,632/3,632)
17 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
0.994;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002999 : Tudor domain
IPR025605 : OST-HTH/LOTUS domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001379)
HIX0001379
HIT000348894 (
ENST00000367614
)
(Tudor domain-containing protein 5;)
genome : 179,560,748 - 179,660,405 (99,658)
query : 1 - 3,632 (3,632/3,632)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001379)
HIX0001379
HIT000214918 (
NM_173533
)
(Tudor domain-containing protein 5;)
genome : 179,560,757 - 179,660,406 (99,650)
query : 1 - 3,792 (3,792/3,836)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001379)
HIX0001379
HIT000656420 (
NM_001199085
)
(Tudor domain-containing protein 5;)
genome : 179,560,757 - 179,660,406 (99,650)
query : 1 - 3,954 (3,954/3,978)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16, cyto 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001379)
HIX0001379
HIT000656424 (
NM_001199089
)
(Tudor domain-containing protein 5;)
genome : 179,560,989 - 179,660,406 (99,418)
query : 1 - 3,667 (3,667/3,711)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16, cyto 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001379)
HIX0001379
HIT000113981 (
ENST00000294848
)
(Tudor domain-containing protein 5;)
genome : 179,561,025 - 179,660,407 (99,383)
query : 1 - 3,525 (3,525/3,525)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001379)
HIX0001379
HIT000047243
(
AK127370
)
Representative transcript
(Tudor domain-containing protein 5;)
genome : 179,561,025 - 179,660,398 (99,374)
query : 1 - 3,516 (3,516/3,516)
17 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002999 : Tudor domain
IPR025605 : OST-HTH/LOTUS domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001379)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC099972
Danio
sp. (Zebrafish) : BC134985
Bos
sp. (Cow) : ENSBTAT00000033959
Equus
sp. (Horse) : ENSECAT00000018070
Pongo
sp. (Orangutan) : ENSPPYT00000000549
Rattus
sp. (Rat) : XM_001072841
Macaca
sp. (Macaque) : XM_001115271
Monodelphis
sp. (Opossum) : XM_001366041
Pan
sp. (Chimpanzee) : XM_514031
Canis
sp. (Dog) : XM_537172
HIX0001379
HIT000542070 (
ENST00000444136
)
(Tudor domain-containing protein 5;)
genome : 179,561,025 - 179,660,398 (99,374)
query : 1 - 3,678 (3,678/3,678)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001379)
HIX0001379
HIT000390322
(
BC130532
)
(Tudor domain-containing protein 5 isoform 1.)
genome : 179,561,025 - 179,660,102 (99,078)
query : 1 - 3,327 (3,327/3,327)
18 exons
identity = 0.999
5'(0.994;1.000;0.998;1.000;1.000;1.000;1.000;
1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002999 : Tudor domain
IPR025605 : OST-HTH/LOTUS domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001379)
HIX0001379
HIT000502493
(
BC144058
)
(Tudor domain-containing protein 5 isoform 1.)
genome : 179,561,025 - 179,660,100 (99,076)
query : 1 - 3,380 (3,380/3,380)
18 exons
identity = 0.999
5'(0.996;1.000;0.998;1.000;1.000;1.000;1.000;
1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002999 : Tudor domain
IPR025605 : OST-HTH/LOTUS domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001379)
HIX0001379
HIT000266230
(
BC089387
)
(Tudor domain-containing protein 5 isoform 2.)
genome : 179,562,943 - 179,660,406 (97,464)
query : 1 - 2,694 (2,694/2,718)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.989;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR002999 : Tudor domain
IPR025605 : OST-HTH/LOTUS domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 16, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001379)
HIX0001379
HIT000261988
(
BC065707
)
(Tudor domain-containing protein 5 isoform 2.)
genome : 179,564,798 - 179,623,487 (58,690)
query : 3 - 1,639 (1,637/1,667)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.995;0.995;
1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR002999 : Tudor domain
IPR025605 : OST-HTH/LOTUS domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001379)
HIX0001379
HIT000017009
(
AK092142
)
(Tudor domain-containing protein 5 isoform 2.)
genome : 179,575,362 - 179,660,405 (85,044)
query : 16 - 2,488 (2,473/2,488)
14 exons
identity = 0.998
5'(1.000;1.000;1.000;0.981;1.000;0.995;1.000;
1.000;1.000;1.000;1.000;0.993;1.000;1.000)3'
coverage = 0.994
InterPro :
IPR002999 : Tudor domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 16, nucl 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001379)
HIX0001379
HIT000656426 (
NM_001199092
)
(Tudor domain-containing protein 5 isoform 3.)
genome : 179,575,362 - 179,660,406 (85,045)
query : 1 - 2,477 (2,477/2,501)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 16, nucl 12.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001379)
HIX0001379
HIT000097628
(
BC043368
)
(Tudor domain-containing protein 5 isoform 3.)
genome : 179,609,086 - 179,660,406 (51,321)
query : 1 - 1,804 (1,804/1,848)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002999 : Tudor domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 13, nucl 11, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001379)
HIX0001379
HIT000515263 (
ENST00000417329
)
(Tudor domain-containing protein 5 isoform 3.)
genome : 179,609,086 - 179,660,407 (51,322)
query : 1 - 1,805 (1,805/1,805)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 13, nucl 11, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001379)
HIX0116920
HIT000455000
(
DQ588469
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,663,133 - 179,663,161 (29)
query : 2 - 30 (29/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116920)
HIX0001380
HIT000425229
(
AK292432
)
Representative transcript
(Protein FAM163A; Cebelin; Neuroblastoma-derived secretory protein;)
genome : 179,696,915 - 179,783,684 (86,770)
query : 2 - 1,324 (1,323/1,324)
6 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR029379 : FAM163
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001380)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK039197
Danio
sp. (Zebrafish) : BC142810
Equus
sp. (Horse) : ENSECAT00000025216
Oryzias
sp. (Medaka) : ENSORLT00000010901
Pongo
sp. (Orangutan) : ENSPPYT00000000548
Pan
sp. (Chimpanzee) : ENSPTRT00000003141
Rattus
sp. (Rat) : ENSRNOT00000036392
Tetraodon
sp. (Tetraodon) : GSTENT00019269001
Takifugu
sp. (Fugu) : SINFRUT00000163511
Macaca
sp. (Macaque) : XM_001111762
Gallus
sp. (Chicken) : XM_001234381
Monodelphis
sp. (Opossum) : XM_001366103
Canis
sp. (Dog) : XM_848417
Bos
sp. (Cow) : XM_864299
HIX0001380
HIT000497289
(
AK302665
)
(Conserved hypothetical protein.)
genome : 179,699,312 - 179,781,934 (82,623)
query : 1 - 1,302 (1,302/1,302)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 2, cyto 2, mito 2, cyto_nucl 2,
cyto_mito 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001380)
HIX0001380
HIT000093064
(
BC033359
)
(Hypothetical short protein.)
genome : 179,699,352 - 179,711,827 (12,476)
query : 1 - 539 (539/551)
2 exons
identity = 0.998
5'(1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13.5, cyto 9, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001380)
HIX0001380
HIT000521813 (
ENST00000423879
)
(Hypothetical short protein.)
genome : 179,699,352 - 179,711,832 (12,481)
query : 1 - 544 (544/544)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13.5, cyto 9, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001380)
HIX0001380
HIT000549405 (
ENST00000451471
)
(Hypothetical short protein.)
genome : 179,711,144 - 179,711,832 (689)
query : 1 - 428 (428/428)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13.5, cyto 9, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001380)
HIX0001380
HIT000034323
(
BC009382
)
(Protein FAM163A; Cebelin; Neuroblastoma-derived secretory protein;)
genome : 179,712,298 - 179,785,332 (73,035)
query : 1 - 2,908 (2,908/2,927)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029379 : FAM163
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001380)
HIX0001380
HIT000214894 (
NM_173509
)
(Protein FAM163A; Cebelin; Neuroblastoma-derived secretory protein;)
genome : 179,712,298 - 179,785,332 (73,035)
query : 1 - 2,908 (2,908/2,927)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001380)
HIX0001380
HIT000258851
(
AY902195
)
(Protein FAM163A; Cebelin; Neuroblastoma-derived secretory protein;)
genome : 179,712,298 - 179,785,332 (73,035)
query : 1 - 2,908 (2,908/2,927)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029379 : FAM163
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001380)
HIX0001380
HIT000134415 (
ENST00000341785
)
(Protein FAM163A; Cebelin; Neuroblastoma-derived secretory protein;)
genome : 179,712,298 - 179,785,333 (73,036)
query : 1 - 2,909 (2,909/2,909)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001380)
HIX0001380
HIT000429577
(
AK310711
)
(Protein FAM163A; Cebelin; Neuroblastoma-derived secretory protein;)
genome : 179,712,426 - 179,783,918 (71,493)
query : 1 - 1,550 (1,550/1,550)
5 exons
identity = 0.999
5'(1.000;1.000;0.955;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029379 : FAM163
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001380)
HIX0001380
HIT000432753
(
AK313887
)
(Protein FAM163A; Cebelin; Neuroblastoma-derived secretory protein;)
genome : 179,712,491 - 179,783,324 (70,834)
query : 1 - 707 (707/707)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029379 : FAM163
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001380)
HIX0001380
HIT000409134
(
AB299025
)
(Protein FAM163A; Cebelin; Neuroblastoma-derived secretory protein;)
genome : 179,782,233 - 179,783,324 (1,092)
query : 1 - 504 (504/504)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029379 : FAM163
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001380)
HIX0203417
HIT000513152 (
ENST00000415218
)
(Hypothetical short protein.)
genome : 179,785,319 - 179,787,326 (2,008)
query : 1 - 544 (544/544)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, extr 9, cyto 8.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203417)
HIX0203417
HIT000550985 (
ENST00000453051
)
(Hypothetical short protein.)
genome : 179,785,319 - 179,786,559 (1,241)
query : 1 - 401 (401/401)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 8.5, cyto_nucl 7, nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203417)
HIX0117077
HIT000461387
(
DQ594856
)
Representative transcript
(Non-protein coding transcript.)
genome : 179,795,028 - 179,795,057 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117077)
HIX0161113
HIT000540042 (
ENST00000442108
)
(Hypothetical short protein.)
genome : 179,798,744 - 179,805,259 (6,516)
query : 1 - 353 (353/353)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 10, cyto_nucl 7.83333, cyto 6.5, nucl 5,
extr_plas 5, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161113)
HIX0018844
HIT000004510
(
AK002036
)
Representative transcript
(Conserved hypothetical protein.)
genome : 179,810,051 - 179,812,337 (2,287)
query : 1 - 2,285 (2,285/2,285)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 5, cyto_nucl 4.5, extr 2, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018844)
HIX0213936
HIT000336897
(
BC101532
)
Representative transcript
(Lamina-associated polypeptide 1C family protein.)
genome : 179,815,112 - 179,821,899 (6,788)
query : 1 - 1,606 (1,606/1,606)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008662 : Lamina-associated polypeptide 1C
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8, plas 7.5, nucl 6.5, pero 6,
extr_plas 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213936)
HIX0213936
HIT000340354
(
BC112225
)
(Lamina-associated polypeptide 1C family protein.)
genome : 179,815,117 - 179,821,899 (6,783)
query : 1 - 1,601 (1,601/1,601)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008662 : Lamina-associated polypeptide 1C
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8, plas 7.5, nucl 6.5, pero 6,
extr_plas 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213936)
HIX0001381
HIT000208681 (
NM_022347
)
(Conserved hypothetical protein.)
genome : 179,828,165 - 179,846,941 (18,777)
query : 1 - 7,074 (7,074/7,074)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001381)
HIX0001381
HIT000586512 (
ENST00000482587
)
(Conserved hypothetical protein.)
genome : 179,828,165 - 179,846,934 (18,770)
query : 1 - 7,067 (7,067/7,067)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001381)
HIX0001381
HIT000004728
(
AK021454
)
(Conserved hypothetical protein.)
genome : 179,831,573 - 179,833,589 (2,017)
query : 1 - 1,574 (1,574/1,574)
2 exons
identity = 0.996
3'(0.999;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14.5, cyto 8.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001381)
HIX0001381
HIT000422590
(
AK289793
)
Representative transcript
(Conserved hypothetical protein.)
genome : 179,833,577 - 179,846,916 (13,340)
query : 1 - 1,637 (1,637/1,637)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001381)
HIX0001381
HIT000246810
(
AJ299406
)
(Conserved hypothetical protein.)
genome : 179,833,916 - 179,834,311 (396)
query : 1 - 396 (396/396)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001381)
HIX0001381
HIT000335664
(
BC096704
)
(Conserved hypothetical protein.)
genome : 179,833,916 - 179,834,311 (396)
query : 1 - 396 (396/396)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001381)
HIX0001381
HIT000335815
(
BC098170
)
(Conserved hypothetical protein.)
genome : 179,833,916 - 179,834,311 (396)
query : 1 - 396 (396/396)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001381)
HIX0001381
HIT000335886
(
BC098309
)
(Conserved hypothetical protein.)
genome : 179,833,916 - 179,834,311 (396)
query : 1 - 396 (396/396)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001381)
HIX0001381
HIT000335910
(
BC098348
)
(Conserved hypothetical protein.)
genome : 179,833,916 - 179,834,311 (396)
query : 1 - 396 (396/396)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001381)
HIX0001381
HIT000667227 (
ENST00000553856
)
(Conserved hypothetical protein.)
genome : 179,833,916 - 179,834,311 (396)
query : 1 - 396 (396/396)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001381)
HIX0001381
HIT000092807
(
BC032790
)
(Conserved hypothetical protein.)
genome : 179,834,146 - 179,834,501 (356)
query : 12 - 367 (356/383)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.970
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001381)
HIX0001381
HIT000599009 (
ENST00000495650
)
(Conserved hypothetical protein.)
genome : 179,834,200 - 179,846,925 (12,726)
query : 1 - 888 (888/888)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 5.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001381)
HIX0001381
HIT000090903
(
BC024226
)
(PDZ and LIM domain protein 5 isoform i.)
genome : 179,836,662 - 179,846,917 (10,256)
query : 1 - 1,760 (1,760/1,790)
2 exons
identity = 0.998
3'(1.000;0.967)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 11.5, cyto 11.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001381)
HIX0214195
HIT000578613 (
ENST00000474318
)
(Conserved hypothetical protein.)
genome : 179,836,662 - 179,846,917 (10,256)
query : 1 - 1,760 (1,760/1,760)
2 exons
identity = 0.999
5'(1.000;0.978)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 12, cyto_nucl 10, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214195)
HIX0001381
HIT000014236
(
AK057623
)
(Conserved hypothetical protein.)
genome : 179,842,841 - 179,846,907 (4,067)
query : 1 - 2,685 (2,685/2,685)
3 exons
identity = 0.997
3'(0.996;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001381)
HIX0001381
HIT000587026 (
ENST00000483123
)
(Conserved hypothetical protein.)
genome : 179,842,841 - 179,846,907 (4,067)
query : 1 - 2,687 (2,687/2,687)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, nucl 9, cyto 9, cyto_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001381)
HIX0001382
HIT000032119
(
BC004969
)
Representative transcript
(Conserved hypothetical protein.)
genome : 179,850,743 - 179,851,730 (988)
query : 1 - 987 (987/1,004)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 6.5, nucl 5.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001382)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK038024
HIX0001382
HIT000263887
(
BC069736
)
(Conserved hypothetical protein.)
genome : 179,850,819 - 179,851,689 (871)
query : 1 - 870 (870/870)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 6.5, nucl 5.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001382)
HIX0199815
HIT000205563 (
NM_015602
)
(Torsin-1A-interacting protein 1; Lamin-associated protein 1B; LAP1B;)
genome : 179,851,177 - 179,889,212 (38,036)
query : 1 - 4,051 (4,051/4,051)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
HIX0199815
HIT000724545 (
NM_001267578
)
(Torsin-1A-interacting protein 1; Lamin-associated protein 1B; LAP1B;)
genome : 179,851,177 - 179,889,212 (38,036)
query : 1 - 4,054 (4,054/4,054)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
HIX0199815
HIT000004254
(
AK001780
)
(Torsin-1A-interacting protein 1 isoform 1.)
genome : 179,851,177 - 179,887,533 (36,357)
query : 1 - 1,760 (1,760/1,760)
8 exons
identity = 0.997
5'(0.998;1.000;1.000;1.000;1.000;1.000;0.957;
0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 18.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
HIX0199815
HIT000627622 (
ENST00000528443
)
(Torsin-1A-interacting protein 1; Lamin-associated protein 1B; LAP1B;)
genome : 179,851,177 - 179,886,864 (35,688)
query : 1 - 1,706 (1,706/1,706)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16.5, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
HIX0199815
HIT000110734 (
ENST00000271583
)
(Torsin-1A-interacting protein 1; Lamin-associated protein 1B; LAP1B;)
genome : 179,851,432 - 179,888,401 (36,970)
query : 1 - 3,033 (3,033/3,044)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
HIX0199815
HIT000533253 (
ENST00000435319
)
(Torsin-1A-interacting protein 1; Lamin-associated protein 1B; LAP1B;)
genome : 179,851,447 - 179,887,533 (36,087)
query : 1 - 2,102 (2,102/2,102)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
HIX0199815
eHIT000012341 ( ESTsASS_1_2347 )
(Non-protein coding transcript.)
genome : 179,851,769 - 179,887,284 (35,516)
query : 1 - 1,531 (1,531/1,531)
10 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
ESTs used for assembly :
AL530866,BM464065,BG819234,BF327104
BI827438,DA539545,DB025830,DB227450
DA552747,BM463761
HIX0199815
HIT000428878
(
AK310012
)
(Torsin-1A-interacting protein 1; Lamin-associated protein 1B; LAP1B;)
genome : 179,851,831 - 179,886,805 (34,975)
query : 1 - 990 (990/990)
10 exons
identity = 0.997
5'(0.996;1.000;1.000;0.976;1.000;1.000;0.976;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008662 : Lamina-associated polypeptide 1C
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
HIX0199815
HIT000004887
(
AK021613
)
(Torsin-1A-interacting protein 1; Lamin-associated protein 1B; LAP1B;)
genome : 179,851,896 - 179,887,533 (35,638)
query : 1 - 1,653 (1,653/1,653)
10 exons
identity = 0.998
5'(1.000;0.987;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
HIX0199815
HIT000630753 (
ENST00000531630
)
(Torsin-1A-interacting protein 1 isoform 1.)
genome : 179,851,929 - 179,877,808 (25,880)
query : 1 - 596 (596/596)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
HIX0199815
HIT000050789
(
BC023247
)
(Torsin-1A-interacting protein 1; Lamin-associated protein 1B; LAP1B;)
genome : 179,851,935 - 179,888,401 (36,467)
query : 1 - 2,482 (2,482/2,496)
10 exons
identity = 0.998
5'(0.994;1.000;1.000;1.000;1.000;1.000;0.976;
1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR008662 : Lamina-associated polypeptide 1C
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
HIX0199815
HIT000006478
(
AK023204
)
Representative transcript
(Torsin-1A-interacting protein 1; Lamin-associated protein 1B; LAP1B;)
genome : 179,851,946 - 179,889,205 (37,260)
query : 1 - 3,275 (3,275/3,275)
10 exons
identity = 0.998
5'(0.994;1.000;0.982;1.000;1.000;1.000;0.976;
1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR008662 : Lamina-associated polypeptide 1C
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB170489
Mus
sp. (Mouse) : AB251963
Rattus
sp. (Rat) : BC086987
Danio
sp. (Zebrafish) : BC152604
Pongo
sp. (Orangutan) : CR860215
Monodelphis
sp. (Opossum) : ENSMODT00000007919
Takifugu
sp. (Fugu) : SINFRUT00000180701
Pan
sp. (Chimpanzee) : XM_001143381
Equus
sp. (Horse) : XM_001915261
Canis
sp. (Dog) : XM_847794
HIX0199815
HIT000424292
(
AK291495
)
(Torsin-1A-interacting protein 1; Lamin-associated protein 1B; LAP1B;)
genome : 179,851,989 - 179,887,561 (35,573)
query : 1 - 1,588 (1,588/1,588)
10 exons
identity = 0.998
5'(0.992;1.000;1.000;1.000;1.000;1.000;0.976;
1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR008662 : Lamina-associated polypeptide 1C
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15.3333, nucl 12,
cyto_golg 10.1667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
HIX0199815
HIT000626592 (
ENST00000527391
)
(Torsin-1A-interacting protein 1; Lamin-associated protein 1B; LAP1B;)
genome : 179,852,024 - 179,883,189 (31,166)
query : 1 - 593 (593/593)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 12, cyto 6, extr 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
HIX0199815
HIT000628257 (
ENST00000529091
)
(Conserved hypothetical protein.)
genome : 179,852,101 - 179,873,157 (21,057)
query : 1 - 587 (587/587)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 11, nucl 8, cyto 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
HIX0199815
HIT000627061 (
ENST00000527867
)
(Torsin-1A-interacting protein 1; Lamin-associated protein 1B; LAP1B;)
genome : 179,853,072 - 179,870,522 (17,451)
query : 1 - 486 (486/486)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12.5, extr 10, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
HIX0199815
HIT000579150 (
ENST00000474875
)
(Torsin-1A-interacting protein 1; Lamin-associated protein 1B; LAP1B;)
genome : 179,853,097 - 179,886,860 (33,764)
query : 1 - 830 (830/830)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14, nucl 11, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
HIX0199815
HIT000630846 (
ENST00000531726
)
(Torsin-1A-interacting protein 1; Lamin-associated protein 1B; LAP1B;)
genome : 179,853,103 - 179,873,876 (20,774)
query : 1 - 475 (475/475)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, cyto 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
HIX0199815
HIT000623905 (
ENST00000524653
)
(Torsin-1A-interacting protein 1; Lamin-associated protein 1B; LAP1B;)
genome : 179,853,120 - 179,877,000 (23,881)
query : 1 - 524 (524/544)
8 exons
identity = 0.987
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.983;
0.884)3'
coverage = 0.963
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14.5, cyto 10.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
HIX0199815
HIT000545898 (
ENST00000447964
)
(Torsin-1A-interacting protein 1; Lamin-associated protein 1B; LAP1B;)
genome : 179,873,101 - 179,887,306 (14,206)
query : 1 - 888 (888/888)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, mito 7, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
HIX0199815
HIT000024004
(
AL050126
)
(Torsin-1A-interacting protein 1; Lamin-associated protein 1B; LAP1B;)
genome : 179,886,831 - 179,888,843 (2,013)
query : 1 - 2,012 (2,012/2,028)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR008662 : Lamina-associated polypeptide 1C
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 16.5, nucl 10, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
HIX0028538
HIT000067052
(
AF086173
)
Representative transcript
(Hypothetical short protein.)
genome : 179,888,464 - 179,888,983 (520)
query : 1 - 520 (520/529)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028538)
HIX0022855
HIT000015750
(
AK090883
)
Representative transcript
(Conserved hypothetical protein.)
genome : 179,891,690 - 179,894,128 (2,439)
query : 1 - 2,439 (2,439/2,439)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 6.5, cyto_nucl 6.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022855)
HIX0214279
HIT000680494 (
ENST00000567486
)
(Hypothetical short protein.)
genome : 179,895,776 - 179,910,931 (15,156)
query : 1 - 447 (447/447)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 5, nucl 4.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214279)
HIX0029288
HIT000095596
(
BC039325
)
Representative transcript
(Conserved hypothetical protein.)
genome : 179,922,319 - 179,923,573 (1,255)
query : 3 - 1,258 (1,256/1,274)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029288)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK133045
HIX0214282
HIT000680899 (
ENST00000567904
)
(Conserved hypothetical protein.)
genome : 179,922,319 - 179,923,575 (1,257)
query : 1 - 1,257 (1,257/1,257)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214282)
HIX0213734
HIT000020456
(
AK095601
)
Representative transcript
(Centrosome-associated protein 350 family protein.)
genome : 179,923,908 - 179,989,970 (66,063)
query : 1 - 3,256 (3,256/3,256)
12 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;0.998;1.000;1.000;
1.000;1.000;0.997;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR028750 : Centrosome-associated protein 350
GO :
0005813 : Cellular Component : centrosome
0008017 : Molecular Function : microtubule binding
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, mito 5, cyto 4, extr 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213734)
HIX0213734
HIT000595019 (
ENST00000491495
)
(Centrosome-associated protein 350 family protein.)
genome : 179,923,908 - 179,966,098 (42,191)
query : 1 - 1,059 (1,059/1,059)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, extr 5, mito 5, cyto 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213734)
HIX0200195
HIT000545517 (
ENST00000447583
)
(Ribosomal protein S2 family protein.)
genome : 179,937,821 - 179,938,641 (821)
query : 1 - 821 (821/821)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, plas 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200195)
HIX0213734
HIT000078764
(
AF387614
)
(Centrosome-associated protein 350 family protein.)
genome : 179,955,317 - 179,961,356 (6,040)
query : 1 - 392 (392/392)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR028750 : Centrosome-associated protein 350
GO :
0005813 : Cellular Component : centrosome
0008017 : Molecular Function : microtubule binding
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213734)
HIX0213734
HIT000311280 (
ENST00000357434
)
(Centrosome-associated protein 350 family protein.)
genome : 179,955,317 - 179,961,356 (6,040)
query : 1 - 392 (392/392)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213734)
HIX0213734
HIT000010260
(
AK026986
)
(Centrosome-associated protein 350 family protein.)
genome : 179,966,186 - 180,006,240 (40,055)
query : 1 - 3,228 (3,228/3,241)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.998;1.000;0.998;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR028750 : Centrosome-associated protein 350
GO :
0005813 : Cellular Component : centrosome
0008017 : Molecular Function : microtubule binding
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213734)
HIX0160568
HIT000522223 (
ENST00000424289
)
(Ribosomal protein S24e family protein.)
genome : 179,969,573 - 179,969,943 (371)
query : 1 - 371 (371/371)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 9.5, cyto_nucl 9.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160568)
HIX0001384
HIT000516163 (
ENST00000418229
)
(Centrosome-associated protein 350 family protein.)
genome : 180,010,338 - 180,022,969 (12,632)
query : 1 - 992 (992/992)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14.5, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000593624 (
ENST00000490047
)
(Conserved hypothetical protein.)
genome : 180,010,797 - 180,017,840 (7,044)
query : 1 - 434 (434/434)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto_nucl 4.5, cyto 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000098968
(
BC048310
)
(Centrosome-associated protein 350 family protein.)
genome : 180,012,233 - 180,053,254 (41,022)
query : 1 - 1,822 (1,822/1,836)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR028750 : Centrosome-associated protein 350
GO :
0005813 : Cellular Component : centrosome
0008017 : Molecular Function : microtubule binding
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000093162
(
BC033619
)
Representative transcript
(Centrosome-associated protein 350 family protein.)
genome : 180,022,927 - 180,080,328 (57,402)
query : 12 - 4,367 (4,356/4,404)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.997
InterPro :
IPR000938 : CAP Gly-rich domain
IPR028750 : Centrosome-associated protein 350
GO :
0005813 : Cellular Component : centrosome
0008017 : Molecular Function : microtubule binding
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 4.5, cyto_golg 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000000197
(
AB007949
)
(Conserved hypothetical protein.)
genome : 180,043,001 - 180,082,515 (39,515)
query : 63 - 6,111 (6,049/6,111)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.988;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000527785 (
ENST00000429851
)
(CAP Gly-rich domain containing protein.)
genome : 180,042,954 - 180,082,515 (39,562)
query : 1 - 6,096 (6,096/6,096)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000089427
(
BC017847
)
(Centrosome-associated protein 350 family protein.)
genome : 180,042,954 - 180,062,032 (19,079)
query : 1 - 1,315 (1,315/1,344)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR028750 : Centrosome-associated protein 350
GO :
0005813 : Cellular Component : centrosome
0008017 : Molecular Function : microtubule binding
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, mito_nucl 14.8333, nucl 11.5,
cyto_nucl 7.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000535179 (
ENST00000437245
)
(Centrosome-associated protein 350 family protein.)
genome : 180,049,652 - 180,053,415 (3,764)
query : 1 - 408 (408/408)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000588211 (
ENST00000484356
)
(Conserved hypothetical protein.)
genome : 180,054,715 - 180,059,883 (5,169)
query : 1 - 524 (524/524)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000045919
(
AK126046
)
(Centrosome-associated protein 350 family protein.)
genome : 180,054,739 - 180,080,327 (25,589)
query : 1 - 3,549 (3,549/3,549)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000938 : CAP Gly-rich domain
IPR028750 : Centrosome-associated protein 350
GO :
0005813 : Cellular Component : centrosome
0008017 : Molecular Function : microtubule binding
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 18.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000593713 (
ENST00000490141
)
(CAP Gly-rich domain containing protein.)
genome : 180,054,739 - 180,080,327 (25,589)
query : 1 - 3,549 (3,549/3,549)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 18.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000006087
(
AK022813
)
(Centrosome-associated protein 350 family protein.)
genome : 180,062,849 - 180,082,515 (19,667)
query : 1 - 2,724 (2,724/2,724)
6 exons
identity = 0.999
5'(0.999;0.998;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000938 : CAP Gly-rich domain
IPR028750 : Centrosome-associated protein 350
GO :
0005813 : Cellular Component : centrosome
0008017 : Molecular Function : microtubule binding
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000514980 (
ENST00000417046
)
(Centrosome-associated protein 350 family protein.)
genome : 180,062,849 - 180,082,515 (19,667)
query : 1 - 2,724 (2,724/2,724)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000599761 (
ENST00000496440
)
(Conserved hypothetical protein.)
genome : 180,064,282 - 180,080,166 (15,885)
query : 1 - 765 (765/765)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 17.5, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0214110
HIT000083087
(
AY007149
)
Representative transcript
(Conserved hypothetical protein.)
genome : 180,082,861 - 180,084,009 (1,149)
query : 1 - 1,149 (1,149/1,168)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3, pero 2.5, mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214110)
HIX0214276
HIT000679930 (
ENST00000566904
)
(Conserved hypothetical protein.)
genome : 180,086,275 - 180,093,025 (6,751)
query : 1 - 506 (506/506)
3 exons
identity = 0.992
3'(1.000;0.985;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214276)
HIX0001385
HIT000199701 (
NM_002826
)
(Sulfhydryl oxidase 1; hQSOX; EC=1.8.3.2; Quiescin Q6; Precursor;)
genome : 180,123,968 - 180,167,169 (43,202)
query : 1 - 3,316 (3,316/3,316)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.8.3.2
SOSUI :
SOLUBLE PROTEIN
PSORT :
golg 13, extr 7, lyso 7, E.R. 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000315820 (
NM_001004128
)
(Sulfhydryl oxidase 1 isoform b precursor.)
genome : 180,123,968 - 180,167,169 (43,202)
query : 1 - 2,583 (2,583/2,583)
13 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.991;0.994)3'
coverage = 1.000
EC number :
EC 1.8.3.2
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, lyso 9, pero 3, cyto_mito 2.5, mito 2,
E.R. 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000222878
(
U97276
)
Representative transcript
(Sulfhydryl oxidase 1; hQSOX; EC=1.8.3.2; Quiescin Q6; Precursor;)
genome : 180,123,968 - 180,167,167 (43,200)
query : 1 - 3,314 (3,314/3,314)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;0.990;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.8.3.2
InterPro :
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR017905 : ERV/ALR sulfhydryl oxidase domain
GO :
0016972 : Molecular Function : thiol oxidase activity
0045454 : Biological Process : cell redox homeostasis
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
golg 13, extr 7, lyso 7, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF285078
Mus
sp. (Mouse) : AK169877
Bos
sp. (Cow) : ENSBTAT00000018869
Danio
sp. (Zebrafish) : ENSDART00000080656
Gallus
sp. (Chicken) : ENSGALT00000006266
Oryzias
sp. (Medaka) : ENSORLT00000021704
Pongo
sp. (Orangutan) : ENSPPYT00000000540
Takifugu
sp. (Fugu) : SINFRUT00000164185
Monodelphis
sp. (Opossum) : XM_001374361
Equus
sp. (Horse) : XM_001488615
Canis
sp. (Dog) : XM_547419
Pan
sp. (Chimpanzee) : XR_023487
HIX0001385
HIT000348882 (
ENST00000367602
)
(Sulfhydryl oxidase 1; hQSOX; EC=1.8.3.2; Quiescin Q6; Precursor;)
genome : 180,123,969 - 180,173,165 (49,197)
query : 1 - 9,311 (9,311/9,311)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.8.3.2
SOSUI :
SOLUBLE PROTEIN
PSORT :
golg 13, extr 7, lyso 7, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000423684
(
AK290887
)
(Sulfhydryl oxidase 1 isoform b precursor.)
genome : 180,124,004 - 180,166,838 (42,835)
query : 1 - 2,216 (2,216/2,216)
13 exons
identity = 0.994
5'(1.000;0.990;1.000;1.000;1.000;1.000;0.985;
1.000;1.000;0.993;1.000;0.988;0.987)3'
coverage = 1.000
EC number :
EC 1.8.3.2
InterPro :
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR017905 : ERV/ALR sulfhydryl oxidase domain
GO :
0016972 : Molecular Function : thiol oxidase activity
0045454 : Biological Process : cell redox homeostasis
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, lyso 12, E.R. 2, pero 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000475523 (
ENST00000392029
)
(Sulfhydryl oxidase 1; hQSOX; EC=1.8.3.2; Quiescin Q6; Precursor;)
genome : 180,124,005 - 180,158,809 (34,805)
query : 1 - 1,075 (1,075/1,075)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 1.8.3.2
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000252985
(
AY358941
)
(Sulfhydryl oxidase 1; hQSOX; EC=1.8.3.2; Quiescin Q6; Precursor;)
genome : 180,124,017 - 180,167,168 (43,152)
query : 1 - 3,266 (3,266/3,266)
12 exons
identity = 0.999
5'(0.997;1.000;1.000;0.990;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.8.3.2
InterPro :
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR017905 : ERV/ALR sulfhydryl oxidase domain
GO :
0016972 : Molecular Function : thiol oxidase activity
0045454 : Biological Process : cell redox homeostasis
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
golg 13, extr 7, lyso 7, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000078392
(
AF361868
)
(Sulfhydryl oxidase 1 isoform b precursor.)
genome : 180,124,032 - 180,167,168 (43,137)
query : 15 - 2,532 (2,518/2,602)
13 exons
identity = 0.995
5'(1.000;1.000;0.978;0.990;0.989;1.000;1.000;
1.000;1.000;0.986;0.994;0.991;0.994)3'
coverage = 0.994
EC number :
EC 1.8.3.2
InterPro :
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR017905 : ERV/ALR sulfhydryl oxidase domain
GO :
0016972 : Molecular Function : thiol oxidase activity
0045454 : Biological Process : cell redox homeostasis
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, lyso 12, E.R. 2, pero 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000423639
(
AK290842
)
(Sulfhydryl oxidase 1 isoform b precursor.)
genome : 180,124,019 - 180,166,711 (42,693)
query : 1 - 2,074 (2,074/2,074)
13 exons
identity = 0.993
5'(1.000;0.990;1.000;1.000;1.000;1.000;0.985;
1.000;0.992;1.000;0.994;0.988;0.980)3'
coverage = 1.000
EC number :
EC 1.8.3.2
InterPro :
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR017905 : ERV/ALR sulfhydryl oxidase domain
GO :
0016972 : Molecular Function : thiol oxidase activity
0045454 : Biological Process : cell redox homeostasis
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, lyso 12, pero 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000336154
(
BC100023
)
(Sulfhydryl oxidase 1; hQSOX; EC=1.8.3.2; Quiescin Q6; Precursor;)
genome : 180,124,024 - 180,167,168 (43,145)
query : 1 - 3,259 (3,259/3,312)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;0.990;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 1.8.3.2
InterPro :
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR017905 : ERV/ALR sulfhydryl oxidase domain
GO :
0016972 : Molecular Function : thiol oxidase activity
0045454 : Biological Process : cell redox homeostasis
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
golg 13, extr 7, lyso 7, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000329215
(
AB209280
)
(Sulfhydryl oxidase 1; hQSOX; EC=1.8.3.2; Quiescin Q6; Precursor;)
genome : 180,124,024 - 180,166,296 (42,273)
query : 1 - 2,387 (2,387/2,387)
12 exons
identity = 0.998
5'(1.000;1.000;0.978;0.990;0.989;1.000;1.000;
1.000;1.000;0.986;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.8.3.2
InterPro :
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR017905 : ERV/ALR sulfhydryl oxidase domain
GO :
0016972 : Molecular Function : thiol oxidase activity
0045454 : Biological Process : cell redox homeostasis
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
golg 13, extr 7, lyso 7, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000038077
(
BC017692
)
(Sulfhydryl oxidase 1 isoform b precursor.)
genome : 180,124,029 - 180,167,168 (43,140)
query : 1 - 2,521 (2,521/2,559)
13 exons
identity = 0.995
5'(1.000;1.000;0.978;0.990;0.989;1.000;1.000;
1.000;1.000;0.986;1.000;0.991;0.993)3'
coverage = 1.000
EC number :
EC 1.8.3.2
InterPro :
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR017905 : ERV/ALR sulfhydryl oxidase domain
GO :
0016972 : Molecular Function : thiol oxidase activity
0045454 : Biological Process : cell redox homeostasis
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, lyso 12, E.R. 2, pero 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000348880 (
ENST00000367600
)
(Sulfhydryl oxidase 1 isoform b precursor.)
genome : 180,124,032 - 180,167,169 (43,138)
query : 1 - 2,519 (2,519/2,519)
13 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.991;0.994)3'
coverage = 1.000
EC number :
EC 1.8.3.2
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, lyso 9, pero 3, cyto_mito 2.5, mito 2,
E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000193810
(
L42379
)
(Sulfhydryl oxidase 1 isoform b precursor.)
genome : 180,124,034 - 180,167,167 (43,134)
query : 1 - 3,228 (3,228/3,228)
12 exons
identity = 0.978
5'(0.985;0.990;1.000;0.990;1.000;0.973;1.000;
0.985;0.976;0.967;0.967;0.975)3'
coverage = 1.000
EC number :
EC 1.8.3.2
InterPro :
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR017905 : ERV/ALR sulfhydryl oxidase domain
GO :
0016972 : Molecular Function : thiol oxidase activity
0045454 : Biological Process : cell redox homeostasis
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, lyso 10, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0029148
HIT000252535
(
AY358491
)
Representative transcript
(Hypothetical protein.)
genome : 180,138,712 - 180,139,938 (1,227)
query : 1 - 1,227 (1,227/1,227)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029148)
HIX0001385
HIT000453933
(
DQ587402
)
(Non-protein coding transcript.)
genome : 180,147,944 - 180,147,973 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000017044
(
AK092177
)
(Hypothetical protein.)
genome : 180,150,090 - 180,167,167 (17,078)
query : 1 - 2,343 (2,343/2,343)
2 exons
identity = 0.996
5'(0.998;0.990)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7, cyto_nucl 5.83333, mito 5,
cyto_pero 4.33333, mito_nucl 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000456009
(
DQ589478
)
(Non-protein coding transcript.)
genome : 180,159,649 - 180,159,678 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0029388
HIT000262559
(
BC067355
)
Representative transcript
(Conserved hypothetical protein.)
genome : 180,160,119 - 180,161,350 (1,232)
query : 1 - 1,232 (1,232/1,249)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 13.5, nucl 11.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029388)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000000541
Pan
sp. (Chimpanzee) : XM_001158727
HIX0001385
HIT000540993 (
ENST00000443059
)
(Sulfhydryl oxidase 1; hQSOX; EC=1.8.3.2; Quiescin Q6; Precursor;)
genome : 180,165,817 - 180,167,151 (1,335)
query : 1 - 893 (893/893)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.8.3.2
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, cyto_nucl 8.5, extr_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000015227
(
AK074447
)
(Conserved hypothetical protein.)
genome : 180,167,146 - 180,169,430 (2,285)
query : 23 - 2,307 (2,285/2,359)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 9, cyto 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000563078 (
NR_026900
)
(Conserved hypothetical protein.)
genome : 180,167,144 - 180,169,860 (2,717)
query : 1 - 2,717 (2,717/2,717)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 9, cyto 5, mito_nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000027839
(
AL832927
)
(Conserved hypothetical protein.)
genome : 180,167,144 - 180,169,430 (2,287)
query : 1 - 2,288 (2,288/2,323)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 9, cyto 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000451417
(
DQ584886
)
(Non-protein coding transcript.)
genome : 180,167,455 - 180,167,485 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001386
HIT000109009 (
ENST00000263726
)
(LIM/homeobox protein Lhx4; LIM homeobox protein 4;)
genome : 180,199,421 - 180,249,380 (49,960)
query : 1 - 7,083 (7,083/7,083)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001386
HIT000072776
(
AF179849
)
Representative transcript
(LIM/homeobox protein Lhx4; LIM homeobox protein 4;)
genome : 180,199,442 - 180,244,101 (44,660)
query : 14 - 1,796 (1,783/1,810)
6 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.985
InterPro :
IPR001781 : Zinc finger, LIM-type
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC049834
Danio
sp. (Zebrafish) : BC129374
Macaca
sp. (Macaque) : ENSMMUT00000016876
Oryzias
sp. (Medaka) : ENSORLT00000021712
Pongo
sp. (Orangutan) : ENSPPYT00000000538
Rattus
sp. (Rat) : ENSRNOT00000050876
Tetraodon
sp. (Tetraodon) : GSTENT00028850001
Takifugu
sp. (Fugu) : SINFRUT00000164183
Gallus
sp. (Chicken) : XM_001235591
Monodelphis
sp. (Opossum) : XM_001374486
Equus
sp. (Horse) : XM_001914825
Pan
sp. (Chimpanzee) : XM_524984
Canis
sp. (Dog) : XM_547420
HIX0001386
HIT000211301 (
NM_033343
)
(LIM/homeobox protein Lhx4; LIM homeobox protein 4;)
genome : 180,199,433 - 180,244,188 (44,756)
query : 1 - 1,879 (1,879/1,909)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001386
HIT000671427 (
ENST00000558139
)
(LIM/homeobox protein Lhx4; LIM homeobox protein 4;)
genome : 180,199,433 - 180,217,832 (18,400)
query : 1 - 721 (721/721)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001386
HIT000035431
(
BC011759
)
(LIM/homeobox protein Lhx4; LIM homeobox protein 4;)
genome : 180,199,622 - 180,244,188 (44,567)
query : 1 - 1,690 (1,690/1,733)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001781 : Zinc finger, LIM-type
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001386
HIT000083906
(
AY053457
)
(LIM/homeobox protein Lhx4; LIM homeobox protein 4;)
genome : 180,199,641 - 180,243,777 (44,137)
query : 1 - 1,260 (1,260/1,260)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001386
HIT000059727
(
AB055703
)
(LIM/homeobox protein Lhx4; LIM homeobox protein 4;)
genome : 180,217,420 - 180,244,088 (26,669)
query : 12 - 1,482 (1,471/1,482)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.993
InterPro :
IPR001781 : Zinc finger, LIM-type
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001386
HIT000059728
(
AB055704
)
(Conserved hypothetical protein.)
genome : 180,217,420 - 180,241,029 (23,610)
query : 12 - 614 (603/614)
4 exons
identity = 0.998
5'(1.000;1.000;0.994;1.000)3'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 13.5, nucl 11.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001386
HIT000076158
(
AF282899
)
(LIM/homeobox protein Lhx4; LIM homeobox protein 4;)
genome : 180,217,420 - 180,243,714 (26,295)
query : 8 - 1,104 (1,097/1,104)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.994
InterPro :
IPR001781 : Zinc finger, LIM-type
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001386
HIT000674343 (
ENST00000561113
)
(Conserved hypothetical protein.)
genome : 180,217,420 - 180,241,029 (23,610)
query : 1 - 603 (603/603)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, extr 8, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001389
HIT000659932 (
NR_037642
)
(Conserved hypothetical protein.)
genome : 180,238,799 - 180,243,816 (5,018)
query : 1 - 2,656 (2,656/2,673)
5 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.886)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9, plas 7, pero 7, mito 4, extr_plas 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001389
HIT000513348 (
ENST00000415414
)
(Conserved hypothetical protein.)
genome : 180,238,788 - 180,243,816 (5,029)
query : 1 - 2,667 (2,667/2,667)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.886)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9, plas 7, pero 7, mito 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001389
HIT000021105
(
AK096250
)
(LIM/homeobox protein Lhx4; LIM homeobox protein 4;)
genome : 180,238,800 - 180,243,816 (5,017)
query : 1 - 2,655 (2,655/2,655)
5 exons
identity = 0.997
3'(0.998;1.000;1.000;1.000;0.886)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9, plas 7, pero 7, mito 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001386
HIT000059195
(
AB037683
)
(LIM/homeobox protein Lhx4; LIM homeobox protein 4;)
genome : 180,240,514 - 180,244,088 (3,575)
query : 1 - 1,097 (1,097/1,097)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001389
HIT000334477
(
BC092502
)
(Conserved hypothetical protein.)
genome : 180,241,738 - 180,245,359 (3,622)
query : 1 - 2,547 (2,547/2,562)
3 exons
identity = 0.997
3'(0.999;1.000;0.996)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001389
HIT000538893 (
ENST00000440959
)
(Conserved hypothetical protein.)
genome : 180,241,737 - 180,245,359 (3,623)
query : 1 - 2,547 (2,547/2,547)
3 exons
identity = 0.998
3'(1.000;1.000;0.997)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, mito 11, cyto_nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001389
HIT000600289 (
ENST00000496993
)
(Ankyrin repeat-containing domain containing protein.)
genome : 180,244,515 - 180,399,397 (154,883)
query : 1 - 672 (672/672)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 12, cyto_nucl 9.33333,
cyto_plas 8.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001386
HIT000009696
(
AK026422
)
(Hypothetical short protein.)
genome : 180,245,085 - 180,247,957 (2,873)
query : 1 - 2,486 (2,486/2,502)
2 exons
identity = 0.992
5'(0.991;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 10.5, cyto 7.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001389
HIT000579585 (
ENST00000475338
)
(Ankyrin repeat-containing domain containing protein.)
genome : 180,256,118 - 180,382,523 (126,406)
query : 1 - 964 (964/964)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001389
HIT000032884
(
BC006505
)
Representative transcript
(Acyl-CoA-binding domain-containing protein 6;)
genome : 180,257,365 - 180,471,479 (214,115)
query : 1 - 1,060 (1,060/1,089)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000582 : Acyl-CoA-binding protein, ACBP
IPR002110 : Ankyrin repeat
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR020683 : Ankyrin repeat-containing domain
GO :
0000062 : Molecular Function : fatty-acyl-CoA binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, nucl 7.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001389
HIT000255733
(
AY606133
)
(Acyl-CoA-binding domain-containing protein 6.)
genome : 180,257,372 - 180,471,435 (214,064)
query : 1 - 1,051 (1,051/1,083)
8 exons
identity = 0.967
3'(1.000;0.707;0.947;0.897;1.000;0.990;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000582 : Acyl-CoA-binding protein, ACBP
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
GO :
0000062 : Molecular Function : fatty-acyl-CoA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.5, nucl 11.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001389
HIT000210590 (
NM_032360
)
(Acyl-CoA-binding protein, ACBP domain containing protein.)
genome : 180,257,352 - 180,472,022 (214,671)
query : 1 - 1,616 (1,616/1,617)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, nucl 7.5, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001389
HIT000348875 (
ENST00000367595
)
(Acyl-CoA-binding protein, ACBP domain containing protein.)
genome : 180,257,365 - 180,472,089 (214,725)
query : 1 - 1,670 (1,670/1,670)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, nucl 7.5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001389
HIT000432978
(
AK314112
)
(Acyl-CoA-binding domain-containing protein 6;)
genome : 180,257,498 - 180,471,997 (214,500)
query : 1 - 1,445 (1,445/1,445)
8 exons
identity = 0.998
3'(1.000;1.000;0.989;1.000;1.000;1.000;1.000;
0.998)5'
coverage = 1.000
InterPro :
IPR000582 : Acyl-CoA-binding protein, ACBP
IPR002110 : Ankyrin repeat
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR020683 : Ankyrin repeat-containing domain
GO :
0000062 : Molecular Function : fatty-acyl-CoA binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14.5, nucl 8.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0161334
HIT000548131 (
ENST00000450197
)
(Eukaryotic porin/Tom40 family protein.)
genome : 180,403,935 - 180,405,071 (1,137)
query : 1 - 835 (835/835)
2 exons
identity = 0.990
5'(1.000;0.980)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, nucl 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161334)
HIX0203893
HIT000659333 (
NR_036067
)
(Non-protein coding transcript.)
genome : 180,407,449 - 180,407,525 (77)
query : 1 - 77 (77/77)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203893)
HIX0203893
HIT000691604 (
ENST00000579680
)
(Non-protein coding transcript.)
genome : 180,407,449 - 180,407,525 (77)
query : 1 - 77 (77/77)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203893)
HIX0028749
HIT000265116
(
BC073892
)
(Conserved hypothetical protein.)
genome : 180,528,110 - 180,535,653 (7,544)
query : 25 - 1,514 (1,490/1,529)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 0.983
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028749)
HIX0028749
HIT000261078
(
BC063624
)
(Hypothetical protein.)
genome : 180,528,110 - 180,535,654 (7,545)
query : 1 - 1,491 (1,491/1,506)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028749)
HIX0028749
HIT000097850
(
BC044260
)
Representative transcript
(Conserved hypothetical protein.)
genome : 180,528,112 - 180,535,653 (7,542)
query : 1 - 1,488 (1,488/1,604)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028749)
HIX0028749
HIT000540555 (
ENST00000442621
)
(Hypothetical protein.)
genome : 180,528,112 - 180,535,654 (7,543)
query : 1 - 1,489 (1,489/1,489)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028749)
HIX0028749
HIT000094639
(
BC036830
)
(Hypothetical protein.)
genome : 180,528,124 - 180,535,654 (7,531)
query : 12 - 1,488 (1,477/1,502)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028749)
HIX0028749
HIT000338685
(
BC107121
)
(Conserved hypothetical protein.)
genome : 180,531,354 - 180,535,416 (4,063)
query : 1 - 1,157 (1,157/1,157)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028749)
HIX0028749
HIT000338686
(
BC107122
)
(Conserved hypothetical protein.)
genome : 180,531,354 - 180,535,416 (4,063)
query : 1 - 1,157 (1,157/1,157)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028749)
HIX0001390
HIT000091611
(
BC028576
)
(Xenotropic and polytropic retrovirus receptor 1 isoform 1.)
genome : 180,601,140 - 180,855,486 (254,347)
query : 2 - 4,571 (4,570/4,607)
15 exons
identity = 0.998
5'(0.996;1.000;1.000;0.996;1.000;0.976;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004331 : SPX, N-terminal
IPR004342 : EXS, C-terminal
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000348870 (
ENST00000367590
)
(Xenotropic and polytropic retrovirus receptor 1; Protein SYG1 homolog; Xenotropic and polytropic murine leukemia virus receptor X3; X-receptor;)
genome : 180,601,140 - 180,859,387 (258,248)
query : 1 - 8,474 (8,474/8,474)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000201473 (
NM_004736
)
(Xenotropic and polytropic retrovirus receptor 1; Protein SYG1 homolog; Xenotropic and polytropic murine leukemia virus receptor X3; X-receptor;)
genome : 180,601,146 - 180,859,415 (258,270)
query : 1 - 8,496 (8,496/8,500)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000560149 (
NM_001135669
)
(Xenotropic and polytropic retrovirus receptor 1; Protein SYG1 homolog; Xenotropic and polytropic murine leukemia virus receptor X3; X-receptor;)
genome : 180,601,146 - 180,859,415 (258,270)
query : 1 - 8,301 (8,301/8,305)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000428616
(
AK309750
)
(Xenotropic and polytropic retrovirus receptor 1 isoform 1.)
genome : 180,601,158 - 180,805,872 (204,715)
query : 1 - 1,701 (1,701/1,701)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004331 : SPX, N-terminal
IPR004342 : EXS, C-terminal
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000052521
(
BC041142
)
(Xenotropic and polytropic retrovirus receptor 1; Protein SYG1 homolog; Xenotropic and polytropic murine leukemia virus receptor X3; X-receptor;)
genome : 180,601,168 - 180,855,261 (254,094)
query : 1 - 4,125 (4,125/4,154)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004331 : SPX, N-terminal
IPR004342 : EXS, C-terminal
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000348869 (
ENST00000367589
)
(Xenotropic and polytropic retrovirus receptor 1; Protein SYG1 homolog; Xenotropic and polytropic murine leukemia virus receptor X3; X-receptor;)
genome : 180,601,168 - 180,855,262 (254,095)
query : 1 - 4,126 (4,126/4,126)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000068574
(
AF099082
)
(Xenotropic and polytropic retrovirus receptor 1; Protein SYG1 homolog; Xenotropic and polytropic murine leukemia virus receptor X3; X-receptor;)
genome : 180,601,174 - 180,853,903 (252,730)
query : 6 - 2,961 (2,956/2,970)
15 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.998
InterPro :
IPR004331 : SPX, N-terminal
IPR004342 : EXS, C-terminal
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000068160
(
AF089744
)
Representative transcript
(Xenotropic and polytropic retrovirus receptor 1; Protein SYG1 homolog; Xenotropic and polytropic murine leukemia virus receptor X3; X-receptor;)
genome : 180,601,173 - 180,855,480 (254,308)
query : 1 - 4,532 (4,532/4,546)
15 exons
identity = 0.998
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004331 : SPX, N-terminal
IPR004342 : EXS, C-terminal
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK147403
Pongo
sp. (Orangutan) : CR858618
Oryzias
sp. (Medaka) : ENSORLT00000009734
Oryzias
sp. (Medaka) : ENSORLT00000021740
Rattus
sp. (Rat) : ENSRNOT00000000049
Tetraodon
sp. (Tetraodon) : GSTENT00028856001
Danio
sp. (Zebrafish) : NM_001126390
Takifugu
sp. (Fugu) : SINFRUT00000154008
Takifugu
sp. (Fugu) : SINFRUT00000164180
Macaca
sp. (Macaque) : XM_001115004
Monodelphis
sp. (Opossum) : XM_001374564
Equus
sp. (Horse) : XM_001488444
Gallus
sp. (Chicken) : XM_422258
Pan
sp. (Chimpanzee) : XM_524986
Canis
sp. (Dog) : XM_547421
Bos
sp. (Cow) : XM_616684
Danio
sp. (Zebrafish) : XM_685744
HIX0001390
HIT000069897
(
AF115389
)
(Xenotropic and polytropic retrovirus receptor 1; Protein SYG1 homolog; Xenotropic and polytropic murine leukemia virus receptor X3; X-receptor;)
genome : 180,601,338 - 180,853,271 (251,934)
query : 1 - 2,160 (2,160/2,160)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004331 : SPX, N-terminal
IPR004342 : EXS, C-terminal
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000024960
(
AL133058
)
(Xenotropic and polytropic retrovirus receptor 1 isoform 1.)
genome : 180,772,607 - 180,853,812 (81,206)
query : 1 - 2,395 (2,395/2,411)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004331 : SPX, N-terminal
IPR004342 : EXS, C-terminal
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000025871
(
AL137583
)
(Xenotropic and polytropic retrovirus receptor 1 isoform 1.)
genome : 180,793,961 - 180,854,581 (60,621)
query : 1 - 2,635 (2,635/2,656)
8 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004342 : EXS, C-terminal
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0214393
HIT000056582
(
BX647935
)
Representative transcript
(Axonemal dynein light chain domain-containing protein 1;)
genome : 179,334,855 - 179,523,869 (189,015)
query : 2 - 3,643 (3,642/3,689)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019347 : Axonemal dynein light chain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, cyto_nucl 9.33333, cyto_mito 7, cyto 6.5,
plas 6, mito 6, mito_pero 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214393)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB070007
Danio
sp. (Zebrafish) : BC139551
Oryzias
sp. (Medaka) : ENSORLT00000010925
Pan
sp. (Chimpanzee) : XM_001157492
Monodelphis
sp. (Opossum) : XM_001374114
Equus
sp. (Horse) : XM_001488358
Gallus
sp. (Chicken) : XM_422266
Canis
sp. (Dog) : XM_537173
Bos
sp. (Cow) : XM_864836
Rattus
sp. (Rat) : XR_008854
HIX0214393
HIT000212929 (
NM_144696
)
(Axonemal dynein light chain domain-containing protein 1;)
genome : 179,334,855 - 179,523,869 (189,015)
query : 1 - 3,641 (3,641/3,656)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, cyto_nucl 9.33333, cyto_mito 7, cyto 6.5,
plas 6, mito 6, mito_pero 4.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214393)
HIX0214393
HIT000348898 (
ENST00000367618
)
(Axonemal dynein light chain domain-containing protein 1;)
genome : 179,334,855 - 179,523,870 (189,016)
query : 1 - 3,642 (3,642/3,642)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, cyto_nucl 9.33333, cyto_mito 7, cyto 6.5,
plas 6, mito 6, mito_pero 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214393)
HIX0214393
HIT000435615
(
BC146823
)
(Axonemal dynein light chain domain-containing protein 1.)
genome : 179,335,107 - 179,523,869 (188,763)
query : 2 - 3,375 (3,374/3,390)
26 exons
identity = 1.000
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019347 : Axonemal dynein light chain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214393)
HIX0214393
HIT000727666 (
NR_073544
)
(Axonemal dynein light chain domain-containing protein 1.)
genome : 179,335,107 - 179,523,869 (188,763)
query : 1 - 3,374 (3,374/3,389)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214393)
HIX0214393
HIT000610890 (
ENST00000511157
)
(Axonemal dynein light chain domain-containing protein 1.)
genome : 179,335,107 - 179,523,870 (188,764)
query : 1 - 3,375 (3,375/3,375)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214393)
HIX0214393
HIT000028787
(
AL833914
)
(Axonemal dynein light chain domain-containing protein 1.)
genome : 179,338,036 - 179,523,869 (185,834)
query : 13 - 2,843 (2,831/2,872)
22 exons
identity = 0.998
5'(1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;0.990;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.983;
0.996)3'
coverage = 0.996
InterPro :
IPR019347 : Axonemal dynein light chain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, nucl 7.5, cyto_nucl 7, cyto 5.5,
E.R._mito 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214393)
HIX0214393
HIT000532022 (
ENST00000434088
)
(Axonemal dynein light chain domain-containing protein 1.)
genome : 179,338,036 - 179,523,870 (185,835)
query : 1 - 2,835 (2,835/2,835)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_mito 10.3333, cyto_nucl 9.33333,
cyto_pero 9.33333, mito_pero 6.66667, mito 6, pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214393)
HIX0214420
HIT000213049 (
NM_145034
)
(Torsin-1A-interacting protein 2; Lumenal domain-like LAP1;)
genome : 179,809,102 - 179,846,941 (37,840)
query : 1 - 7,912 (7,912/7,912)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8, plas 7.5, nucl 6.5, pero 6,
extr_plas 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214420)
HIX0214420
HIT000656499 (
NM_001199260
)
(Torsin-1A-interacting protein 2; Lumenal domain-like LAP1;)
genome : 179,809,102 - 179,846,941 (37,840)
query : 1 - 8,331 (8,331/8,331)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8, plas 7.5, nucl 6.5, pero 6,
extr_plas 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214420)
HIX0214420
HIT000348892 (
ENST00000367612
)
(Torsin-1A-interacting protein 2; Lumenal domain-like LAP1;)
genome : 179,809,102 - 179,846,934 (37,833)
query : 1 - 7,905 (7,905/7,905)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8, plas 7.5, nucl 6.5, pero 6,
extr_plas 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214420)
HIX0214420
HIT000335025
(
BC094724
)
Representative transcript
(Torsin-1A-interacting protein 2; Lumenal domain-like LAP1;)
genome : 179,813,067 - 179,846,938 (33,872)
query : 1 - 4,363 (4,363/4,378)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008662 : Lamina-associated polypeptide 1C
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8, plas 7.5, nucl 6.5, pero 6,
extr_plas 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214420)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB048903
Mus
sp. (Mouse) : AK038024
Rattus
sp. (Rat) : BC061831
Bos
sp. (Cow) : BC142484
Monodelphis
sp. (Opossum) : ENSMODT00000007893
Oryzias
sp. (Medaka) : ENSORLT00000020844
Pongo
sp. (Orangutan) : ENSPPYT00000000547
Tetraodon
sp. (Tetraodon) : GSTENT00020193001
Pan
sp. (Chimpanzee) : XM_001158035
Danio
sp. (Zebrafish) : XM_001339566
Equus
sp. (Horse) : XM_001488108
Canis
sp. (Dog) : XM_847786
HIX0214420
HIT000080291
(
AF464140
)
(Torsin-1A-interacting protein 2; Lumenal domain-like LAP1;)
genome : 179,813,953 - 179,846,934 (32,982)
query : 2 - 3,055 (3,054/3,074)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.991)5'
coverage = 1.000
InterPro :
IPR008662 : Lamina-associated polypeptide 1C
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8, plas 7.5, nucl 6.5, pero 6,
extr_plas 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214420)
HIX0214378
HIT000348887 (
ENST00000367607
)
(Centrosome-associated protein 350; Cep350; Centrosome-associated protein of 350 kDa;)
genome : 179,923,873 - 180,084,015 (160,143)
query : 1 - 13,491 (13,491/13,491)
38 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214378)
HIX0214378
HIT000205107 (
NM_014810
)
(Centrosome-associated protein 350; Cep350; Centrosome-associated protein of 350 kDa;)
genome : 179,923,908 - 180,084,015 (160,108)
query : 1 - 13,456 (13,456/13,473)
38 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214378)
HIX0214378
HIT000076327
(
AF287356
)
Representative transcript
(Centrosome-associated protein 350; Cep350; Centrosome-associated protein of 350 kDa;)
genome : 179,924,124 - 180,082,515 (158,392)
query : 1 - 11,740 (11,740/11,740)
38 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;0.986;1.000;1.000;0.999;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.988;1.000;1.000;
1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000938 : CAP Gly-rich domain
IPR028750 : Centrosome-associated protein 350
GO :
0005813 : Cellular Component : centrosome
0008017 : Molecular Function : microtubule binding
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214378)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179086
Rattus
sp. (Rat) : AF287357
Mus
sp. (Mouse) : AK172956
Gallus
sp. (Chicken) : CR354032
Bos
sp. (Cow) : ENSBTAT00000010631
Canis
sp. (Dog) : ENSCAFT00000020139
Monodelphis
sp. (Opossum) : ENSMODT00000008023
Oryzias
sp. (Medaka) : ENSORLT00000021683
Pongo
sp. (Orangutan) : ENSPPYT00000000542
Tetraodon
sp. (Tetraodon) : GSTENT00028847001
Pan
sp. (Chimpanzee) : XM_001158487
Danio
sp. (Zebrafish) : XM_001343717
Equus
sp. (Horse) : XM_001488233
HIX0214378
HIT000003179
(
AK000704
)
(Centrosome-associated protein 350; Cep350; Centrosome-associated protein of 350 kDa;)
genome : 179,965,757 - 180,053,245 (87,489)
query : 1 - 3,518 (3,518/3,530)
21 exons
identity = 0.998
5'(1.000;0.990;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 18, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214378)
HIX0178280
pHIT000098694 ( pHIT000098694 )
Representative transcript
(Conserved hypothetical protein.)
genome : 179,555,840 - 179,558,251 (2,412)
query : 1 - 1,755 (1,755/1,755)
4 exons
InterPro :
IPR001164 : Arf GTPase activating protein
IPR001806 : Small GTPase superfamily
IPR001849 : Pleckstrin homology domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178280)
CAGE tag :
T01R0A9AB852
Ortholog candidate ( ->
Evola
)
Oryzias
sp. (Medaka) : ENSORLT00000019096
Tetraodon
sp. (Tetraodon) : GSTENT00033817001
Takifugu
sp. (Fugu) : SINFRUT00000167156
Macaca
sp. (Macaque) : XM_001111865
Equus
sp. (Horse) : XM_001915910
Danio
sp. (Zebrafish) : XM_001921491
Canis
sp. (Dog) : XM_843373
HIX0199815
eHIT000012341 ( ESTsASS_1_2347 )
(Non-protein coding transcript.)
genome : 179,851,769 - 179,887,284 (35,516)
query : 1 - 1,531 (1,531/1,531)
10 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199815)
ESTs used for assembly :
AL530866,BM464065,BG819234,BF327104
BI827438,DA539545,DB025830,DB227450
DA552747,BM463761
AL512326.25
179200001-179281993 F +
NCBI
AL355806.12
179281994-179285852 F +
NCBI
AL451075.15
179285853-179439789 F +
NCBI
AL160286.16
179439790-179593205 F +
NCBI
AL691433.8
179593206-179598339 F +
NCBI
AL590987.8
179598340-179677829 F +
NCBI
AL359853.18
179677830-179848860 F +
NCBI
AL353708.10
179848861-179938885 F +
NCBI
AL590632.5
179938886-180017215 F +
NCBI
AL645487.8
180017216-180021209 F +
NCBI
AL390718.11
180021210-180195332 F +
NCBI
AL139141.23
180195333-180307140 F +
NCBI
AL445469.4
180307141-180436544 F +
NCBI
AL358354.16
180436545-180568604 F +
NCBI
AL358434.16
180568605-180744979 F +
NCBI
AL603884.2
180744980-180746973 F +
NCBI
AL590085.4
180746974-180800000 F +
NCBI