bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0029404
HIT000660415 (
NR_038845
)
(Hypothetical short protein.)
genome : 219,254,318 - 219,347,130 (92,813)
query : 1 - 1,626 (1,626/1,642)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 4, cyto 2, mito 2, extr_plas 2,
cyto_mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029404)
HIX0029404
HIT000266135
(
BC086863
)
Representative transcript
(Conserved hypothetical protein.)
genome : 219,254,318 - 219,347,093 (92,776)
query : 1 - 1,590 (1,590/1,606)
5 exons
identity = 0.997
3'(0.997;0.994;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 4, cyto 2, mito 2, extr_plas 2,
cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029404)
HIX0029404
HIT000539265 (
ENST00000441331
)
(Hypothetical short protein.)
genome : 219,259,944 - 219,347,303 (87,360)
query : 1 - 724 (724/724)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 4, cyto 2, mito 2, extr_plas 2,
cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029404)
HIX0214235
HIT000600082 (
ENST00000496776
)
(Phospholipase/carboxylesterase/thioesterase domain containing protein.)
genome : 219,347,218 - 219,366,827 (19,610)
query : 1 - 656 (656/656)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214235)
HIX0214025
HIT000579953 (
ENST00000475724
)
(Phospholipase/carboxylesterase/thioesterase domain containing protein.)
genome : 219,371,885 - 219,386,207 (14,323)
query : 1 - 1,715 (1,715/1,715)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214025)
HIX0160584
HIT000522671 (
ENST00000424737
)
(ATP-grasp fold, RimK-type domain containing protein.)
genome : 219,373,256 - 219,373,909 (654)
query : 1 - 654 (654/654)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, cyto 6, nucl 5, cysk 3, cyto_pero 3,
cyto_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160584)
HIX0001598
HIT000019203
(
AK094348
)
Representative transcript
(Conserved hypothetical protein.)
genome : 219,376,590 - 219,378,711 (2,122)
query : 1 - 2,120 (2,120/2,121)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001598)
HIX0214025
HIT000584994 (
ENST00000481007
)
(Phospholipase/carboxylesterase/thioesterase domain containing protein.)
genome : 219,383,684 - 219,385,169 (1,486)
query : 1 - 642 (642/642)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, cyto 6.5, mito 5.5, cyto_nucl 5.16667,
E.R._mito 5, cyto_pero 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214025)
HIX0029279
HIT000095325
(
BC038730
)
Representative transcript
(Hypothetical short protein.)
genome : 219,395,590 - 219,398,839 (3,250)
query : 1 - 1,126 (1,126/1,143)
2 exons
identity = 0.997
3'(0.997;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 11, cyto_mito 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029279)
HIX0029279
HIT000518171 (
ENST00000420237
)
(Hypothetical short protein.)
genome : 219,395,590 - 219,398,839 (3,250)
query : 1 - 1,126 (1,126/1,126)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 11, cyto_mito 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029279)
HIX0001599
HIT000016866
(
AK091999
)
Representative transcript
(Conserved hypothetical protein.)
genome : 219,444,116 - 219,446,727 (2,612)
query : 1 - 2,613 (2,613/2,613)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 6, nucl 5, cyto 5, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001599)
HIX0161107
HIT000539724 (
ENST00000441790
)
(Conserved hypothetical protein.)
genome : 219,583,023 - 219,585,283 (2,261)
query : 1 - 811 (811/811)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161107)
HIX0160469
HIT000518696 (
ENST00000420762
)
(Hypothetical short protein.)
genome : 219,608,494 - 219,615,984 (7,491)
query : 1 - 451 (451/451)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160469)
HIX0161575
HIT000556377 (
ENST00000458443
)
(Non-protein coding transcript.)
genome : 219,730,534 - 219,731,043 (510)
query : 1 - 182 (182/182)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161575)
HIX0028838
HIT000724997_01 (
NM_001271675
)
(Zinc finger, CCCH-type domain containing protein.)
genome : 219,782,313 - 219,786,505 (4,193)
query : 1 - 3,826 (3,826/3,826)
2 exons
identity = 0.995
3'(0.996;0.991)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028838)
HIX0028838
HIT000512024_02 (
ENST00000414090
)
(Zinc finger, CCCH-type domain containing protein.)
genome : 219,782,859 - 219,786,462 (3,604)
query : 1 - 3,237 (3,237/3,237)
2 exons
identity = 0.996
3'(0.996;0.989)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028838)
HIX0028838
HIT000529700_01 (
ENST00000431766
)
(Zinc finger, CCCH-type domain containing protein.)
genome : 219,782,859 - 219,786,462 (3,604)
query : 1 - 3,237 (3,237/3,237)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028838)
HIX0028838
HIT000348491 (
ENST00000367211
)
(Zinc finger, CCCH-type domain containing protein.)
genome : 219,782,969 - 219,785,404 (2,436)
query : 1 - 2,436 (2,436/2,436)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028838)
HIX0001600
HIT000022321
(
AK097467
)
Representative transcript
(Zinc transporter 10; ZnT-10; Solute carrier family 30 member 10;)
genome : 219,858,769 - 220,131,989 (273,221)
query : 1 - 1,902 (1,902/1,902)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.990;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002524 : Cation efflux protein
IPR027469 : Cation efflux protein transmembrane domain
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001600)
HIX0001600
HIT000588101 (
ENST00000484239
)
(Zinc transporter 10; ZnT-10; Solute carrier family 30 member 10;)
genome : 219,858,769 - 220,131,989 (273,221)
query : 1 - 1,902 (1,902/1,902)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001600)
HIX0001600
HIT000094247
(
BC036078
)
(Zinc transporter 10; ZnT-10; Solute carrier family 30 member 10;)
genome : 220,086,857 - 220,101,515 (14,659)
query : 1 - 3,162 (3,162/3,176)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002524 : Cation efflux protein
IPR027469 : Cation efflux protein transmembrane domain
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29, E.R._mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001600)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC108419
Pongo
sp. (Orangutan) : ENSPPYT00000000231
Rattus
sp. (Rat) : XM_001065717
Macaca
sp. (Macaque) : XM_001103570
Monodelphis
sp. (Opossum) : XM_001375521
Equus
sp. (Horse) : XM_001489145
Gallus
sp. (Chicken) : XM_419410
Pan
sp. (Chimpanzee) : XM_525065
Canis
sp. (Dog) : XM_545716
HIX0001600
HIT000310579 (
ENST00000356609
)
(Zinc transporter 10; ZnT-10; Solute carrier family 30 member 10;)
genome : 220,086,848 - 220,101,993 (15,146)
query : 1 - 3,650 (3,650/3,650)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29, E.R._mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001600)
HIX0001600
HIT000026337
(
AL359609
)
(Zinc transporter 10; ZnT-10; Solute carrier family 30 member 10;)
genome : 220,087,606 - 220,092,372 (4,767)
query : 1 - 2,460 (2,460/2,476)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
InterPro :
IPR002524 : Cation efflux protein
IPR027469 : Cation efflux protein transmembrane domain
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001600)
HIX0001600
HIT000207405 (
NM_018713
)
(Zinc transporter 10; ZnT-10; Solute carrier family 30 member 10;)
genome : 220,087,606 - 220,101,993 (14,388)
query : 1 - 2,854 (2,854/2,869)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001600)
HIX0001600
HIT000726720 (
NR_046437
)
(Zinc transporter 10; ZnT-10; Solute carrier family 30 member 10;)
genome : 220,087,606 - 220,101,993 (14,388)
query : 1 - 2,892 (2,892/2,907)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29, E.R._mito 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001600)
HIX0001600
HIT000587943 (
ENST00000484079
)
(Zinc transporter 10; ZnT-10; Solute carrier family 30 member 10;)
genome : 220,087,606 - 220,092,372 (4,767)
query : 1 - 2,461 (2,461/2,461)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001600)
HIX0001600
HIT000015673
(
AK090806
)
(Zinc transporter 10; ZnT-10; Solute carrier family 30 member 10;)
genome : 220,087,806 - 220,101,993 (14,188)
query : 1 - 2,692 (2,692/2,692)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR002524 : Cation efflux protein
IPR027469 : Cation efflux protein transmembrane domain
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29, E.R._mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001600)
HIX0001600
HIT000251072
(
AY212919
)
(Zinc transporter 10; ZnT-10; Solute carrier family 30 member 10;)
genome : 220,088,496 - 220,101,944 (13,449)
query : 1 - 1,949 (1,949/1,955)
4 exons
identity = 0.979
3'(0.952;1.000;1.000;0.999)5'
coverage = 0.997
InterPro :
IPR002524 : Cation efflux protein
IPR027469 : Cation efflux protein transmembrane domain
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001600)
HIX0001600
HIT000348206 (
ENST00000366926
)
(Zinc transporter 10; ZnT-10; Solute carrier family 30 member 10;)
genome : 220,088,496 - 220,101,944 (13,449)
query : 1 - 1,915 (1,915/1,915)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001600)
HIX0001600
HIT000635491 (
ENST00000536446
)
(Zinc transporter 10; ZnT-10; Solute carrier family 30 member 10;)
genome : 220,088,791 - 220,131,989 (43,199)
query : 1 - 898 (898/898)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001600)
HIX0001600
HIT000636037 (
ENST00000536992
)
(Zinc transporter 10; ZnT-10; Solute carrier family 30 member 10;)
genome : 220,100,454 - 220,101,993 (1,540)
query : 1 - 883 (883/883)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, extr 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001600)
HIX0028712
HIT000306830
(
CR933648
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,141,945 - 220,219,839 (77,895)
query : 1 - 4,852 (4,852/4,883)
32 exons
identity = 0.998
3'(1.000;1.000;0.987;1.000;1.000;1.000;1.000;
0.980;0.988;1.000;0.990;0.981;0.996;1.000;
1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000738 : WHEP-TRS
IPR000924 : Glutamyl/glutaminyl-tRNA synthetase
IPR001412 : Aminoacyl-tRNA synthetase, class I, conserved site
IPR002314 : Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
IPR004046 : Glutathione S-transferase, C-terminal
IPR004154 : Anticodon-binding
IPR004499 : Proline-tRNA ligase, class IIa, archaeal-type
IPR004526 : Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic
IPR006195 : Aminoacyl-tRNA synthetase, class II
IPR009068 : S15/NS1, RNA-binding
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR011035 : Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR016061 : Proline-tRNA ligase, class II, C-terminal
IPR017449 : Prolyl-tRNA synthetase, class II
IPR020056 : Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain
IPR020058 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
IPR020059 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain
IPR020061 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004818 : Molecular Function : glutamate-tRNA ligase activity
0004827 : Molecular Function : proline-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006412 : Biological Process : translation
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006424 : Biological Process : glutamyl-tRNA aminoacylation
0006433 : Biological Process : prolyl-tRNA aminoacylation
0016876 : Molecular Function : ligase activity, forming aminoacyl-tRNA and related compounds
0043039 : Biological Process : tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, mito 7.5, E.R. 7, mito_pero 6, cyto_plas 6,
cyto_golg 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0028712
HIT000201194 (
NM_004446
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,141,942 - 220,220,000 (78,059)
query : 1 - 5,015 (5,015/5,021)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, mito 7.5, E.R. 7, mito_pero 6, cyto_plas 6,
cyto_golg 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0028712
HIT000348203 (
ENST00000366923
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,141,943 - 220,220,000 (78,058)
query : 1 - 5,014 (5,014/5,014)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, mito 7.5, E.R. 7, mito_pero 6, cyto_plas 6,
cyto_golg 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0028712
HIT000321887
(
X54326
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,141,943 - 220,208,328 (66,386)
query : 1 - 4,586 (4,586/4,586)
30 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.988;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;0.994;0.995;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000738 : WHEP-TRS
IPR000924 : Glutamyl/glutaminyl-tRNA synthetase
IPR001412 : Aminoacyl-tRNA synthetase, class I, conserved site
IPR002314 : Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
IPR004046 : Glutathione S-transferase, C-terminal
IPR004154 : Anticodon-binding
IPR004499 : Proline-tRNA ligase, class IIa, archaeal-type
IPR004526 : Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic
IPR006195 : Aminoacyl-tRNA synthetase, class II
IPR009068 : S15/NS1, RNA-binding
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR011035 : Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR016061 : Proline-tRNA ligase, class II, C-terminal
IPR017449 : Prolyl-tRNA synthetase, class II
IPR020056 : Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain
IPR020058 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
IPR020059 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain
IPR020061 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004818 : Molecular Function : glutamate-tRNA ligase activity
0004827 : Molecular Function : proline-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006412 : Biological Process : translation
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006424 : Biological Process : glutamyl-tRNA aminoacylation
0006433 : Biological Process : prolyl-tRNA aminoacylation
0016876 : Molecular Function : ligase activity, forming aminoacyl-tRNA and related compounds
0043039 : Biological Process : tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, cyto_mito 11, nucl 6, cyto 5.5, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0028712
HIT000492816
(
AK298192
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,141,944 - 220,160,612 (18,669)
query : 1 - 1,837 (1,837/1,837)
13 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;0.988;1.000;1.000;0.945;0.992)5'
coverage = 1.000
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002314 : Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
IPR002316 : Proline-tRNA ligase, class IIa
IPR004154 : Anticodon-binding
IPR004499 : Proline-tRNA ligase, class IIa, archaeal-type
IPR006195 : Aminoacyl-tRNA synthetase, class II
IPR016061 : Proline-tRNA ligase, class II, C-terminal
IPR017449 : Prolyl-tRNA synthetase, class II
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004827 : Molecular Function : proline-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006433 : Biological Process : prolyl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11.8333, cyto_mito 11, nucl 4.5,
mito_pero 3.33333, mito 2.5, pero 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0028712
HIT000331843
(
AY493416
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,142,018 - 220,208,303 (66,286)
query : 1 - 4,486 (4,486/4,486)
30 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.988;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;0.994;0.995;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000738 : WHEP-TRS
IPR000924 : Glutamyl/glutaminyl-tRNA synthetase
IPR001412 : Aminoacyl-tRNA synthetase, class I, conserved site
IPR002314 : Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
IPR004046 : Glutathione S-transferase, C-terminal
IPR004154 : Anticodon-binding
IPR004499 : Proline-tRNA ligase, class IIa, archaeal-type
IPR004526 : Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic
IPR006195 : Aminoacyl-tRNA synthetase, class II
IPR009068 : S15/NS1, RNA-binding
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR011035 : Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR016061 : Proline-tRNA ligase, class II, C-terminal
IPR017449 : Prolyl-tRNA synthetase, class II
IPR020056 : Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain
IPR020058 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
IPR020059 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain
IPR020061 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004818 : Molecular Function : glutamate-tRNA ligase activity
0004827 : Molecular Function : proline-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006412 : Biological Process : translation
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006424 : Biological Process : glutamyl-tRNA aminoacylation
0006433 : Biological Process : prolyl-tRNA aminoacylation
0016876 : Molecular Function : ligase activity, forming aminoacyl-tRNA and related compounds
0043039 : Biological Process : tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, mito 7, nucl 5, mito_pero 5, extr 2, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0028712
HIT000573053 (
ENST00000468487
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,142,031 - 220,142,589 (559)
query : 1 - 458 (458/458)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0028712
HIT000388867
(
BC126275
)
Representative transcript
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,142,124 - 220,219,781 (77,658)
query : 87 - 4,701 (4,615/4,701)
32 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.949)5'
coverage = 0.982
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000738 : WHEP-TRS
IPR000924 : Glutamyl/glutaminyl-tRNA synthetase
IPR001412 : Aminoacyl-tRNA synthetase, class I, conserved site
IPR002314 : Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
IPR004046 : Glutathione S-transferase, C-terminal
IPR004154 : Anticodon-binding
IPR004499 : Proline-tRNA ligase, class IIa, archaeal-type
IPR004526 : Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic
IPR006195 : Aminoacyl-tRNA synthetase, class II
IPR009068 : S15/NS1, RNA-binding
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR011035 : Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR016061 : Proline-tRNA ligase, class II, C-terminal
IPR017449 : Prolyl-tRNA synthetase, class II
IPR020056 : Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain
IPR020058 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
IPR020059 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain
IPR020061 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004818 : Molecular Function : glutamate-tRNA ligase activity
0004827 : Molecular Function : proline-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006412 : Biological Process : translation
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006424 : Biological Process : glutamyl-tRNA aminoacylation
0006433 : Biological Process : prolyl-tRNA aminoacylation
0016876 : Molecular Function : ligase activity, forming aminoacyl-tRNA and related compounds
0043039 : Biological Process : tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, mito 7.5, E.R. 7, mito_pero 6, cyto_plas 6,
cyto_golg 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB170708
Gallus
sp. (Chicken) : AJ720548
Rattus
sp. (Rat) : AY383705
Mus
sp. (Mouse) : BC094679
Danio
sp. (Zebrafish) : BC154533
Tetraodon
sp. (Tetraodon) : CR680085
Oryzias
sp. (Medaka) : ENSORLT00000018578
Takifugu
sp. (Fugu) : SINFRUT00000134106
Pan
sp. (Chimpanzee) : XM_001172414
Monodelphis
sp. (Opossum) : XM_001367297
Equus
sp. (Horse) : XM_001488930
Canis
sp. (Dog) : XM_536120
HIX0028712
HIT000500483
(
BC136465
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,142,124 - 220,219,768 (77,645)
query : 1 - 4,601 (4,601/4,601)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000738 : WHEP-TRS
IPR000924 : Glutamyl/glutaminyl-tRNA synthetase
IPR001412 : Aminoacyl-tRNA synthetase, class I, conserved site
IPR002314 : Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
IPR004046 : Glutathione S-transferase, C-terminal
IPR004154 : Anticodon-binding
IPR004499 : Proline-tRNA ligase, class IIa, archaeal-type
IPR004526 : Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic
IPR006195 : Aminoacyl-tRNA synthetase, class II
IPR009068 : S15/NS1, RNA-binding
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR011035 : Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR016061 : Proline-tRNA ligase, class II, C-terminal
IPR017449 : Prolyl-tRNA synthetase, class II
IPR020056 : Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain
IPR020058 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
IPR020059 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain
IPR020061 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004818 : Molecular Function : glutamate-tRNA ligase activity
0004827 : Molecular Function : proline-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006412 : Biological Process : translation
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006424 : Biological Process : glutamyl-tRNA aminoacylation
0006433 : Biological Process : prolyl-tRNA aminoacylation
0016876 : Molecular Function : ligase activity, forming aminoacyl-tRNA and related compounds
0043039 : Biological Process : tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, mito 7.5, E.R. 7, mito_pero 6, cyto_plas 6,
cyto_golg 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0028712
HIT000589609 (
ENST00000485821
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,155,852 - 220,157,600 (1,749)
query : 1 - 598 (598/598)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, extr 3, nucl 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0028712
HIT000093566
(
BC034797
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,160,626 - 220,219,796 (59,171)
query : 1 - 2,962 (2,962/2,976)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000738 : WHEP-TRS
IPR000924 : Glutamyl/glutaminyl-tRNA synthetase
IPR001412 : Aminoacyl-tRNA synthetase, class I, conserved site
IPR004046 : Glutathione S-transferase, C-terminal
IPR004526 : Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic
IPR009068 : S15/NS1, RNA-binding
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR011035 : Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR020056 : Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain
IPR020058 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
IPR020059 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain
IPR020061 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004818 : Molecular Function : glutamate-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006412 : Biological Process : translation
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006424 : Biological Process : glutamyl-tRNA aminoacylation
0016876 : Molecular Function : ligase activity, forming aminoacyl-tRNA and related compounds
0043039 : Biological Process : tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0028712
HIT000338350
(
BC105983
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,160,635 - 220,219,775 (59,141)
query : 24 - 2,976 (2,953/2,993)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.995;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.992
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000738 : WHEP-TRS
IPR000924 : Glutamyl/glutaminyl-tRNA synthetase
IPR001412 : Aminoacyl-tRNA synthetase, class I, conserved site
IPR004046 : Glutathione S-transferase, C-terminal
IPR004526 : Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic
IPR009068 : S15/NS1, RNA-binding
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR011035 : Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR020056 : Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain
IPR020058 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
IPR020059 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain
IPR020061 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004818 : Molecular Function : glutamate-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006412 : Biological Process : translation
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006424 : Biological Process : glutamyl-tRNA aminoacylation
0016876 : Molecular Function : ligase activity, forming aminoacyl-tRNA and related compounds
0043039 : Biological Process : tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0028712
HIT000491379
(
AK296755
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,160,633 - 220,219,872 (59,240)
query : 1 - 3,106 (3,106/3,106)
20 exons
identity = 0.998
3'(1.000;0.996;0.997;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.995;0.990;
1.000;1.000;0.994;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000738 : WHEP-TRS
IPR000924 : Glutamyl/glutaminyl-tRNA synthetase
IPR001412 : Aminoacyl-tRNA synthetase, class I, conserved site
IPR004046 : Glutathione S-transferase, C-terminal
IPR009068 : S15/NS1, RNA-binding
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR011035 : Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR020056 : Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain
IPR020058 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
IPR020059 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain
IPR020061 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006412 : Biological Process : translation
0006418 : Biological Process : tRNA aminoacylation for protein translation
0016876 : Molecular Function : ligase activity, forming aminoacyl-tRNA and related compounds
0043039 : Biological Process : tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 14, nucl 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0028712
HIT000426400
(
AK307534
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,160,636 - 220,208,330 (47,695)
query : 1 - 2,730 (2,730/2,730)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000738 : WHEP-TRS
IPR000924 : Glutamyl/glutaminyl-tRNA synthetase
IPR001412 : Aminoacyl-tRNA synthetase, class I, conserved site
IPR004046 : Glutathione S-transferase, C-terminal
IPR004526 : Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic
IPR009068 : S15/NS1, RNA-binding
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR011035 : Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR020056 : Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain
IPR020058 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
IPR020059 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain
IPR020061 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004818 : Molecular Function : glutamate-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006412 : Biological Process : translation
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006424 : Biological Process : glutamyl-tRNA aminoacylation
0016876 : Molecular Function : ligase activity, forming aminoacyl-tRNA and related compounds
0043039 : Biological Process : tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, cyto_mito 15, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0028712
HIT000321260
(
X07466
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,160,645 - 220,205,756 (45,112)
query : 1 - 2,377 (2,377/2,377)
16 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;0.986;0.993;
1.000;1.000;0.988;1.000;0.994;0.995;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000738 : WHEP-TRS
IPR000924 : Glutamyl/glutaminyl-tRNA synthetase
IPR001412 : Aminoacyl-tRNA synthetase, class I, conserved site
IPR004526 : Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic
IPR009068 : S15/NS1, RNA-binding
IPR011035 : Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR020056 : Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain
IPR020058 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
IPR020059 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain
IPR020061 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004818 : Molecular Function : glutamate-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006412 : Biological Process : translation
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006424 : Biological Process : glutamyl-tRNA aminoacylation
0016876 : Molecular Function : ligase activity, forming aminoacyl-tRNA and related compounds
0043039 : Biological Process : tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 7, cysk 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0028712
HIT000721304
(
JQ080075
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,162,116 - 220,219,730 (57,615)
query : 1 - 2,591 (2,591/2,610)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000738 : WHEP-TRS
IPR000924 : Glutamyl/glutaminyl-tRNA synthetase
IPR001412 : Aminoacyl-tRNA synthetase, class I, conserved site
IPR004046 : Glutathione S-transferase, C-terminal
IPR004526 : Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic
IPR009068 : S15/NS1, RNA-binding
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR011035 : Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR020056 : Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain
IPR020058 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
IPR020059 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain
IPR020061 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004818 : Molecular Function : glutamate-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006412 : Biological Process : translation
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006424 : Biological Process : glutamyl-tRNA aminoacylation
0016876 : Molecular Function : ligase activity, forming aminoacyl-tRNA and related compounds
0043039 : Biological Process : tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 15.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0028712
HIT000259931
(
BC058921
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,162,114 - 220,219,837 (57,724)
query : 1 - 2,700 (2,700/2,714)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000738 : WHEP-TRS
IPR000924 : Glutamyl/glutaminyl-tRNA synthetase
IPR001412 : Aminoacyl-tRNA synthetase, class I, conserved site
IPR004046 : Glutathione S-transferase, C-terminal
IPR004526 : Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic
IPR009068 : S15/NS1, RNA-binding
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR011035 : Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR020056 : Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain
IPR020058 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
IPR020059 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain
IPR020061 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004818 : Molecular Function : glutamate-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006412 : Biological Process : translation
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006424 : Biological Process : glutamyl-tRNA aminoacylation
0016876 : Molecular Function : ligase activity, forming aminoacyl-tRNA and related compounds
0043039 : Biological Process : tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.5, nucl 8.5, mito 2, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0028712
HIT000568817 (
ENST00000464052
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,170,518 - 220,180,707 (10,190)
query : 1 - 770 (770/770)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 10, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0028712
HIT000262809
(
BC067841
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,174,543 - 220,219,872 (45,330)
query : 1 - 1,526 (1,526/1,544)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000924 : Glutamyl/glutaminyl-tRNA synthetase
IPR004046 : Glutathione S-transferase, C-terminal
IPR010987 : Glutathione S-transferase, C-terminal-like
GO :
0000166 : Molecular Function : nucleotide binding
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0016876 : Molecular Function : ligase activity, forming aminoacyl-tRNA and related compounds
0043039 : Biological Process : tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11, nucl 6.5, extr 6, mito 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0028712
HIT000098289
(
BC046156
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,195,833 - 220,220,000 (24,168)
query : 1 - 1,241 (1,241/1,255)
9 exons
identity = 0.999
3'(1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000924 : Glutamyl/glutaminyl-tRNA synthetase
IPR001412 : Aminoacyl-tRNA synthetase, class I, conserved site
IPR004046 : Glutathione S-transferase, C-terminal
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR020058 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0016876 : Molecular Function : ligase activity, forming aminoacyl-tRNA and related compounds
0043039 : Biological Process : tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0028712
HIT000088715
(
BC015494
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,195,835 - 220,219,788 (23,954)
query : 1 - 1,027 (1,027/1,042)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000924 : Glutamyl/glutaminyl-tRNA synthetase
IPR001412 : Aminoacyl-tRNA synthetase, class I, conserved site
IPR004046 : Glutathione S-transferase, C-terminal
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR020058 : Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0016876 : Molecular Function : ligase activity, forming aminoacyl-tRNA and related compounds
0043039 : Biological Process : tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 10, plas 1, extr 1, E.R. 1, cysk 1,
extr_plas 1, cysk_plas 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0028712
HIT000581195 (
ENST00000477030
)
(Bifunctional glutamate/proline--tRNA ligase; Bifunctional aminoacyl-tRNA synthetase; Cell proliferation-inducing gene 32 protein; Glutamatyl-prolyl-tRNA synthetase; Includes: Glutamate--tRNA ligase; EC=6.1.1.17; Glutamyl-tRNA synthetase; GluRS; Includes: Proline--tRNA ligase; EC=6.1.1.15; Prolyl-tRNA synthetase;)
genome : 220,205,728 - 220,219,798 (14,071)
query : 1 - 500 (500/500)
5 exons
identity = 0.994
3'(1.000;0.965;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.15
,
EC 6.1.1.17
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
00970 : Aminoacyl-tRNA biosynthesis (32)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 6, cysk 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028712)
HIX0001601
HIT000123003 (
ENST00000322067
)
(3'(2'),5'-bisphosphate nucleotidase 1; EC=3.1.3.7; Bisphosphate 3'-nucleotidase 1; PAP-inositol 1,4-phosphatase; PIP;)
genome : 220,230,824 - 220,263,191 (32,368)
query : 1 - 2,461 (2,461/2,461)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.7
KEGG pathway :
00920 : Sulfur metabolism (30)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001601)
HIX0001601
HIT000317033 (
NM_006085
)
(3'(2'),5'-bisphosphate nucleotidase 1; EC=3.1.3.7; Bisphosphate 3'-nucleotidase 1; PAP-inositol 1,4-phosphatase; PIP;)
genome : 220,230,824 - 220,263,191 (32,368)
query : 1 - 2,461 (2,461/2,461)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.7
KEGG pathway :
00920 : Sulfur metabolism (30)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001601)
HIX0001601
HIT000574039 (
ENST00000469520
)
(3'(2'),5'-bisphosphate nucleotidase 1; EC=3.1.3.7; Bisphosphate 3'-nucleotidase 1; PAP-inositol 1,4-phosphatase; PIP;)
genome : 220,230,826 - 220,263,804 (32,979)
query : 1 - 2,737 (2,737/2,737)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.7
KEGG pathway :
00920 : Sulfur metabolism (30)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001601)
HIX0001601
HIT000005215
(
AK021941
)
(3'(2'),5'-bisphosphate nucleotidase 1.)
genome : 220,230,826 - 220,240,691 (9,866)
query : 1 - 1,861 (1,861/1,861)
4 exons
identity = 0.996
3'(0.996;1.000;0.995;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.7
KEGG pathway :
00920 : Sulfur metabolism (30)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000760 : Inositol monophosphatase
IPR020550 : Inositol monophosphatase, conserved site
GO :
0046854 : Biological Process : phosphatidylinositol phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 21, cyto_nucl 16, cyto_plas 13.1667, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001601)
HIX0001601
HIT000038140
(
BC017801
)
(3'(2'),5'-bisphosphate nucleotidase 1.)
genome : 220,231,073 - 220,263,134 (32,062)
query : 1 - 1,124 (1,124/1,153)
10 exons
identity = 0.996
3'(0.989;0.957;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 3.1.3.7
KEGG pathway :
00920 : Sulfur metabolism (30)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000760 : Inositol monophosphatase
IPR020550 : Inositol monophosphatase, conserved site
IPR020583 : Inositol monophosphatase, metal-binding site
GO :
0046854 : Biological Process : phosphatidylinositol phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28.5, cyto_mito 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001601)
HIX0001601
HIT000309045 (
ENST00000354807
)
(3'(2'),5'-bisphosphate nucleotidase 1.)
genome : 220,231,073 - 220,263,114 (32,042)
query : 1 - 1,152 (1,152/1,152)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.7
KEGG pathway :
00920 : Sulfur metabolism (30)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001601)
HIX0001601
HIT000499575
(
AK315962
)
(3'(2'),5'-bisphosphate nucleotidase 1.)
genome : 220,231,792 - 220,263,175 (31,384)
query : 1 - 1,391 (1,391/1,391)
8 exons
identity = 0.995
3'(0.991;0.991;1.000;1.000;1.000;1.000;1.000;
0.995)5'
coverage = 1.000
EC number :
EC 3.1.3.7
KEGG pathway :
00920 : Sulfur metabolism (30)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000760 : Inositol monophosphatase
IPR020550 : Inositol monophosphatase, conserved site
IPR020583 : Inositol monophosphatase, metal-binding site
GO :
0046854 : Biological Process : phosphatidylinositol phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16.6667, cyto_plas 12.1667, nucl 5,
mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001601)
HIX0001601
HIT000643449 (
ENST00000544404
)
(3'(2'),5'-bisphosphate nucleotidase 1.)
genome : 220,231,792 - 220,263,175 (31,384)
query : 1 - 1,391 (1,391/1,391)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.7
KEGG pathway :
00920 : Sulfur metabolism (30)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16.6667, cyto_plas 12.1667, nucl 5,
mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001601)
HIX0001601
HIT000245925
(
AJ249339
)
(3'(2'),5'-bisphosphate nucleotidase 1; EC=3.1.3.7; Bisphosphate 3'-nucleotidase 1; PAP-inositol 1,4-phosphatase; PIP;)
genome : 220,231,939 - 220,263,154 (31,216)
query : 7 - 1,315 (1,309/1,315)
9 exons
identity = 0.998
3'(0.997;0.991;1.000;1.000;1.000;1.000;1.000;
1.000;0.992)5'
coverage = 0.995
EC number :
EC 3.1.3.7
KEGG pathway :
00920 : Sulfur metabolism (30)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000760 : Inositol monophosphatase
IPR020583 : Inositol monophosphatase, metal-binding site
GO :
0046854 : Biological Process : phosphatidylinositol phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001601)
HIX0001601
HIT000495401
(
AK300777
)
(3'(2'),5'-bisphosphate nucleotidase 1; EC=3.1.3.7; Bisphosphate 3'-nucleotidase 1; PAP-inositol 1,4-phosphatase; PIP;)
genome : 220,231,941 - 220,263,139 (31,199)
query : 2 - 1,185 (1,184/1,185)
8 exons
identity = 0.993
3'(0.980;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
EC number :
EC 3.1.3.7
KEGG pathway :
00920 : Sulfur metabolism (30)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000760 : Inositol monophosphatase
IPR020550 : Inositol monophosphatase, conserved site
IPR020583 : Inositol monophosphatase, metal-binding site
GO :
0046854 : Biological Process : phosphatidylinositol phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001601)
HIX0001601
HIT000512803 (
ENST00000414869
)
(3'(2'),5'-bisphosphate nucleotidase 1; EC=3.1.3.7; Bisphosphate 3'-nucleotidase 1; PAP-inositol 1,4-phosphatase; PIP;)
genome : 220,231,941 - 220,263,139 (31,199)
query : 1 - 1,184 (1,184/1,184)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.7
KEGG pathway :
00920 : Sulfur metabolism (30)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001601)
HIX0001601
HIT000493100
(
AK298476
)
(3'(2'),5'-bisphosphate nucleotidase 1.)
genome : 220,232,006 - 220,263,139 (31,134)
query : 2 - 1,100 (1,099/1,100)
8 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
EC number :
EC 3.1.3.7
KEGG pathway :
00920 : Sulfur metabolism (30)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000760 : Inositol monophosphatase
IPR020550 : Inositol monophosphatase, conserved site
IPR020583 : Inositol monophosphatase, metal-binding site
GO :
0046854 : Biological Process : phosphatidylinositol phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16.6667, cyto_plas 12.1667, nucl 5,
mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001601)
HIX0001601
HIT000424740
(
AK291943
)
Representative transcript
(3'(2'),5'-bisphosphate nucleotidase 1; EC=3.1.3.7; Bisphosphate 3'-nucleotidase 1; PAP-inositol 1,4-phosphatase; PIP;)
genome : 220,232,165 - 220,263,130 (30,966)
query : 1 - 1,059 (1,059/1,059)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.7
KEGG pathway :
00920 : Sulfur metabolism (30)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000760 : Inositol monophosphatase
IPR020550 : Inositol monophosphatase, conserved site
IPR020583 : Inositol monophosphatase, metal-binding site
GO :
0046854 : Biological Process : phosphatidylinositol phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001601)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK151931
Danio
sp. (Zebrafish) : BC075903
Gallus
sp. (Chicken) : BX931514
Tetraodon
sp. (Tetraodon) : CR707652
Equus
sp. (Horse) : ENSECAT00000022554
Macaca
sp. (Macaque) : ENSMMUT00000024464
Monodelphis
sp. (Opossum) : ENSMODT00000005553
Oryzias
sp. (Medaka) : ENSORLT00000014212
Pongo
sp. (Orangutan) : ENSPPYT00000000228
Rattus
sp. (Rat) : ENSRNOT00000003249
Takifugu
sp. (Fugu) : SINFRUT00000133609
Pan
sp. (Chimpanzee) : XM_001172500
Canis
sp. (Dog) : XM_845576
HIX0001601
HIT000586086 (
ENST00000482136
)
(3'(2'),5'-bisphosphate nucleotidase 1.)
genome : 220,236,141 - 220,263,075 (26,935)
query : 1 - 546 (546/546)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.7
KEGG pathway :
00920 : Sulfur metabolism (30)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001601)
HIX0001601
HIT000568726 (
ENST00000463953
)
(3'(2'),5'-bisphosphate nucleotidase 1.)
genome : 220,236,153 - 220,263,111 (26,959)
query : 1 - 644 (644/644)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.7
KEGG pathway :
00920 : Sulfur metabolism (30)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 24, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001601)
HIX0001601
HIT000601999 (
ENST00000498791
)
(3'(2'),5'-bisphosphate nucleotidase 1.)
genome : 220,236,254 - 220,263,169 (26,916)
query : 1 - 559 (559/559)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.7
KEGG pathway :
00920 : Sulfur metabolism (30)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001601)
HIX0001601
HIT000584947 (
ENST00000480959
)
(3'(2'),5'-bisphosphate nucleotidase 1.)
genome : 220,236,258 - 220,263,175 (26,918)
query : 1 - 583 (583/583)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.7
KEGG pathway :
00920 : Sulfur metabolism (30)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 18.6667, cyto_plas 12.5,
nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001601)
HIX0001601
HIT000662635 (
ENST00000548668
)
(3'(2'),5'-bisphosphate nucleotidase 1.)
genome : 220,240,357 - 220,247,409 (7,053)
query : 1 - 637 (637/637)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.7
KEGG pathway :
00920 : Sulfur metabolism (30)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 18.6667, cyto_plas 13, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001601)
HIX0001601
HIT000601465 (
ENST00000498237
)
(3'(2'),5'-bisphosphate nucleotidase 1.)
genome : 220,242,724 - 220,263,154 (20,431)
query : 1 - 561 (561/561)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.7
KEGG pathway :
00920 : Sulfur metabolism (30)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 13.5, mito_pero 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001601)
HIX0001602
HIT000331748
(
AY267462
)
Representative transcript
(Isoleucine--tRNA ligase, mitochondrial; EC=6.1.1.5; Isoleucyl-tRNA synthetase; IleRS; Precursor;)
genome : 220,267,444 - 220,321,380 (53,937)
query : 1 - 3,557 (3,557/3,557)
23 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
EC number :
EC 6.1.1.5
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR001412 : Aminoacyl-tRNA synthetase, class I, conserved site
IPR002300 : Aminoacyl-tRNA synthetase, class Ia
IPR002301 : Isoleucine-tRNA ligase
IPR009008 : Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
IPR009080 : Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR010663 : Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase
IPR013155 : Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR023585 : Isoleucine-tRNA ligase, type 1
GO :
0000166 : Molecular Function : nucleotide binding
0002161 : Molecular Function : aminoacyl-tRNA editing activity
0003824 : Molecular Function : catalytic activity
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004822 : Molecular Function : isoleucine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006428 : Biological Process : isoleucyl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto_mito 14.8333, cyto_nucl 4.16667,
nucl 3.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001602)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169344
Mus
sp. (Mouse) : AK043590
Canis
sp. (Dog) : ENSCAFT00000017536
Equus
sp. (Horse) : ENSECAT00000024407
Oryzias
sp. (Medaka) : ENSORLT00000022297
Pongo
sp. (Orangutan) : ENSPPYT00000000227
Rattus
sp. (Rat) : ENSRNOT00000057394
Tetraodon
sp. (Tetraodon) : GSTENT00009778001
Takifugu
sp. (Fugu) : SINFRUT00000138839
Danio
sp. (Zebrafish) : XM_001335330
Monodelphis
sp. (Opossum) : XM_001375593
Pan
sp. (Chimpanzee) : XM_514209
HIX0001602
HIT000348202 (
ENST00000366922
)
(Isoleucine--tRNA ligase, mitochondrial; EC=6.1.1.5; Isoleucyl-tRNA synthetase; IleRS; Precursor;)
genome : 220,267,444 - 220,321,380 (53,937)
query : 1 - 3,557 (3,557/3,557)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.1.1.5
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto_mito 14.8333, cyto_nucl 4.16667,
nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001602)
HIX0001602
HIT000206898 (
NM_018060
)
(Isoleucine--tRNA ligase, mitochondrial; EC=6.1.1.5; Isoleucyl-tRNA synthetase; IleRS; Precursor;)
genome : 220,267,455 - 220,321,383 (53,929)
query : 1 - 3,549 (3,549/3,549)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.1.1.5
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto_mito 14.8333, cyto_nucl 4.16667,
nucl 3.5, cyto 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001602)
HIX0001602
HIT000116223 (
ENST00000302637
)
(Isoleucine--tRNA ligase, mitochondrial; EC=6.1.1.5; Isoleucyl-tRNA synthetase; IleRS; Precursor;)
genome : 220,267,455 - 220,321,376 (53,922)
query : 1 - 3,542 (3,542/3,542)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.1.1.5
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto_mito 14.8333, cyto_nucl 4.16667,
nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001602)
HIX0001602
HIT000501340
(
BC137438
)
(Isoleucine--tRNA ligase, mitochondrial; EC=6.1.1.5; Isoleucyl-tRNA synthetase; IleRS; Precursor;)
genome : 220,267,485 - 220,321,112 (53,628)
query : 1 - 3,248 (3,248/3,248)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.1.1.5
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR001412 : Aminoacyl-tRNA synthetase, class I, conserved site
IPR002300 : Aminoacyl-tRNA synthetase, class Ia
IPR002301 : Isoleucine-tRNA ligase
IPR009008 : Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
IPR009080 : Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR010663 : Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase
IPR013155 : Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR023585 : Isoleucine-tRNA ligase, type 1
GO :
0000166 : Molecular Function : nucleotide binding
0002161 : Molecular Function : aminoacyl-tRNA editing activity
0003824 : Molecular Function : catalytic activity
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004822 : Molecular Function : isoleucine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006428 : Biological Process : isoleucyl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto_mito 14.8333, cyto_nucl 4.16667,
nucl 3.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001602)
HIX0001602
HIT000333260
(
AY952883
)
(Isoleucine--tRNA ligase, mitochondrial precursor.)
genome : 220,267,551 - 220,275,925 (8,375)
query : 10 - 859 (850/859)
6 exons
identity = 0.994
5'(1.000;1.000;1.000;0.993;0.962;0.978)3'
coverage = 0.999
EC number :
EC 6.1.1.5
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR001412 : Aminoacyl-tRNA synthetase, class I, conserved site
IPR002300 : Aminoacyl-tRNA synthetase, class Ia
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR023585 : Isoleucine-tRNA ligase, type 1
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004822 : Molecular Function : isoleucine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0006418 : Biological Process : tRNA aminoacylation for protein translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001602)
HIX0001602
HIT000101302
(
D28500
)
(Isoleucine--tRNA ligase, mitochondrial precursor.)
genome : 220,267,614 - 220,321,380 (53,767)
query : 1 - 3,387 (3,387/3,387)
23 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
EC number :
EC 6.1.1.5
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR001412 : Aminoacyl-tRNA synthetase, class I, conserved site
IPR002300 : Aminoacyl-tRNA synthetase, class Ia
IPR002301 : Isoleucine-tRNA ligase
IPR009008 : Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
IPR009080 : Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR010663 : Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase
IPR013155 : Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR023585 : Isoleucine-tRNA ligase, type 1
GO :
0000166 : Molecular Function : nucleotide binding
0002161 : Molecular Function : aminoacyl-tRNA editing activity
0003824 : Molecular Function : catalytic activity
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004822 : Molecular Function : isoleucine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006428 : Biological Process : isoleucyl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001602)
HIX0001602
HIT000424229
(
AK291432
)
(Isoleucine--tRNA ligase, mitochondrial precursor.)
genome : 220,267,646 - 220,321,299 (53,654)
query : 1 - 3,274 (3,274/3,274)
23 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.1.1.5
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR001412 : Aminoacyl-tRNA synthetase, class I, conserved site
IPR002300 : Aminoacyl-tRNA synthetase, class Ia
IPR002301 : Isoleucine-tRNA ligase
IPR009008 : Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
IPR009080 : Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR010663 : Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase
IPR013155 : Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR023585 : Isoleucine-tRNA ligase, type 1
GO :
0000166 : Molecular Function : nucleotide binding
0002161 : Molecular Function : aminoacyl-tRNA editing activity
0003824 : Molecular Function : catalytic activity
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004822 : Molecular Function : isoleucine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006428 : Biological Process : isoleucyl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001602)
HIX0001602
HIT000096148
(
BC040376
)
(Isoleucine--tRNA ligase, mitochondrial precursor.)
genome : 220,267,722 - 220,321,383 (53,662)
query : 1 - 3,282 (3,282/3,401)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.1.1.5
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR001412 : Aminoacyl-tRNA synthetase, class I, conserved site
IPR002300 : Aminoacyl-tRNA synthetase, class Ia
IPR002301 : Isoleucine-tRNA ligase
IPR009008 : Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
IPR009080 : Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR010663 : Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase
IPR013155 : Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR023585 : Isoleucine-tRNA ligase, type 1
GO :
0000166 : Molecular Function : nucleotide binding
0002161 : Molecular Function : aminoacyl-tRNA editing activity
0003824 : Molecular Function : catalytic activity
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004822 : Molecular Function : isoleucine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006428 : Biological Process : isoleucyl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001602)
HIX0001602
HIT000098812
(
BC047880
)
(Isoleucine--tRNA ligase, mitochondrial precursor.)
genome : 220,273,830 - 220,321,383 (47,554)
query : 20 - 3,076 (3,057/3,090)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.994
EC number :
EC 6.1.1.5
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR002300 : Aminoacyl-tRNA synthetase, class Ia
IPR002301 : Isoleucine-tRNA ligase
IPR009008 : Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
IPR009080 : Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR010663 : Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase
IPR013155 : Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR023585 : Isoleucine-tRNA ligase, type 1
GO :
0000166 : Molecular Function : nucleotide binding
0002161 : Molecular Function : aminoacyl-tRNA editing activity
0003824 : Molecular Function : catalytic activity
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004822 : Molecular Function : isoleucine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006428 : Biological Process : isoleucyl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 9.5, cyto_plas 6, plas 1.5, extr 1,
mito 1, lyso 1, cysk 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001602)
HIX0001602
HIT000003662
(
AK001188
)
(Isoleucine--tRNA ligase, mitochondrial precursor.)
genome : 220,273,863 - 220,321,376 (47,514)
query : 1 - 3,016 (3,016/3,016)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.995;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.1.1.5
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 13, cyto_nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001602)
HIX0001602
HIT000034863
(
BC010218
)
(Isoleucine--tRNA ligase, mitochondrial precursor.)
genome : 220,275,722 - 220,321,377 (45,656)
query : 1 - 2,719 (2,719/2,742)
19 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993)3'
coverage = 1.000
EC number :
EC 6.1.1.5
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR002300 : Aminoacyl-tRNA synthetase, class Ia
IPR002301 : Isoleucine-tRNA ligase
IPR009008 : Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
IPR009080 : Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR010663 : Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase
IPR013155 : Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR023585 : Isoleucine-tRNA ligase, type 1
GO :
0000166 : Molecular Function : nucleotide binding
0002161 : Molecular Function : aminoacyl-tRNA editing activity
0003824 : Molecular Function : catalytic activity
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004822 : Molecular Function : isoleucine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006428 : Biological Process : isoleucyl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 11, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001602)
HIX0001602
HIT000004200
(
AK001726
)
(Isoleucine--tRNA ligase, mitochondrial precursor.)
genome : 220,276,077 - 220,321,382 (45,306)
query : 1 - 2,536 (2,536/2,536)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.1.1.5
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 11.5, cyto_plas 7, mito_nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001602)
HIX0001602
HIT000005939
(
AK022665
)
(Isoleucine--tRNA ligase, mitochondrial precursor.)
genome : 220,284,130 - 220,321,375 (37,246)
query : 1 - 2,108 (2,108/2,108)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000;1.000;0.995;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.1.1.5
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR002300 : Aminoacyl-tRNA synthetase, class Ia
IPR002301 : Isoleucine-tRNA ligase
IPR009008 : Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
IPR009080 : Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR010663 : Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase
IPR013155 : Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
IPR014729 : Rossmann-like alpha/beta/alpha sandwich fold
IPR023585 : Isoleucine-tRNA ligase, type 1
GO :
0000166 : Molecular Function : nucleotide binding
0002161 : Molecular Function : aminoacyl-tRNA editing activity
0003824 : Molecular Function : catalytic activity
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004822 : Molecular Function : isoleucine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006428 : Biological Process : isoleucyl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, nucl 13.5, cyto 13,
cyto_plas 8.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001602)
HIX0001602
HIT000594432 (
ENST00000490891
)
(Isoleucine--tRNA ligase, mitochondrial precursor.)
genome : 220,287,793 - 220,308,188 (20,396)
query : 1 - 447 (447/447)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.1.1.5
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15, nucl 8.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001602)
HIX0149147
HIT000470816 (
ENST00000384858
)
(Non-protein coding transcript.)
genome : 220,291,195 - 220,291,304 (110)
query : 1 - 110 (110/110)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0149147)
HIX0149147
HIT000658027 (
NR_029628
)
(Non-protein coding transcript.)
genome : 220,291,195 - 220,291,304 (110)
query : 1 - 110 (110/110)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0149147)
HIX0148799
HIT000470848 (
ENST00000384892
)
(Hypothetical short protein.)
genome : 220,291,499 - 220,291,583 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148799)
HIX0148799
HIT000658089 (
NR_029711
)
(Hypothetical short protein.)
genome : 220,291,499 - 220,291,583 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148799)
HIX0001602
HIT000592407 (
ENST00000488777
)
(Isoleucine--tRNA ligase, mitochondrial precursor.)
genome : 220,310,984 - 220,313,560 (2,577)
query : 1 - 570 (570/570)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.1.1.5
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 15.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001602)
HIX0001602
HIT000572515 (
ENST00000467924
)
(Isoleucine--tRNA ligase, mitochondrial precursor.)
genome : 220,313,523 - 220,316,686 (3,164)
query : 1 - 656 (656/656)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.1.1.5
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, extr 12, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001602)
HIX0160431
HIT000517432 (
ENST00000419498
)
(Ribosomal protein S8 family protein.)
genome : 220,317,306 - 220,317,693 (388)
query : 1 - 388 (388/388)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 26, mito 4.5, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160431)
HIX0001603
HIT000204154 (
NM_012414
)
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,321,610 - 220,445,843 (124,234)
query : 1 - 7,329 (7,329/7,329)
35 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.957;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 11.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000312579 (
ENST00000358951
)
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,321,635 - 220,445,796 (124,162)
query : 1 - 7,257 (7,257/7,257)
35 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.957;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000005202
(
AK021928
)
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,321,636 - 220,445,772 (124,137)
query : 1 - 1,852 (1,852/1,852)
8 exons
identity = 0.994
3'(1.000;0.990;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR026059 : Rab3-GAP regulatory subunit
GO :
0043087 : Biological Process : regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 5.5, cyto_nucl 5.5, cyto 4.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000587175 (
ENST00000483278
)
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,321,648 - 220,445,772 (124,125)
query : 1 - 1,840 (1,840/1,840)
8 exons
identity = 0.995
3'(1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 5.5, cyto_nucl 5.5, cyto 4.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000094456
(
BC036513
)
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,323,813 - 220,445,796 (121,984)
query : 6 - 5,085 (5,080/5,197)
35 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.957;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR026059 : Rab3-GAP regulatory subunit
IPR029257 : Rab3GAP regulatory subunit, C-terminal
GO :
0043087 : Biological Process : regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000002413
(
AF255648
)
Representative transcript
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,323,727 - 220,445,752 (122,026)
query : 1 - 5,129 (5,129/5,129)
35 exons
identity = 0.997
3'(0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.957;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC057872
Danio
sp. (Zebrafish) : BC129145
Gallus
sp. (Chicken) : CR387808
Oryzias
sp. (Medaka) : ENSORLT00000022274
Pongo
sp. (Orangutan) : ENSPPYT00000000226
Tetraodon
sp. (Tetraodon) : GSTENT00009779001
Takifugu
sp. (Fugu) : SINFRUT00000135688
Macaca
sp. (Macaque) : XM_001103011
Monodelphis
sp. (Opossum) : XM_001375614
Equus
sp. (Horse) : XM_001488134
Pan
sp. (Chimpanzee) : XM_514211
Canis
sp. (Dog) : XM_536122
HIX0001603
HIT000024793
(
AL117631
)
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,323,813 - 220,341,019 (17,207)
query : 18 - 2,175 (2,158/2,196)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.992
InterPro :
IPR026059 : Rab3-GAP regulatory subunit
IPR029257 : Rab3GAP regulatory subunit, C-terminal
GO :
0043087 : Biological Process : regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14.5, nucl 5.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000435552
(
BC146760
)
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,323,813 - 220,445,679 (121,867)
query : 1 - 4,962 (4,962/4,982)
35 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.957;1.000;1.000;0.990;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026059 : Rab3-GAP regulatory subunit
IPR029257 : Rab3GAP regulatory subunit, C-terminal
GO :
0043087 : Biological Process : regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000335937
(
BC098383
)
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,323,815 - 220,445,772 (121,958)
query : 1 - 5,071 (5,071/5,086)
35 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.984;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026059 : Rab3-GAP regulatory subunit
IPR029257 : Rab3GAP regulatory subunit, C-terminal
GO :
0043087 : Biological Process : regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 7, nucl 5, extr 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000000556
(
AB020646
)
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,323,814 - 220,445,679 (121,866)
query : 1 - 4,961 (4,961/4,961)
35 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.957;1.000;1.000;0.990;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000010757
(
AK027485
)
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,323,814 - 220,357,461 (33,648)
query : 1 - 3,047 (3,047/3,047)
17 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.995;0.987;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026059 : Rab3-GAP regulatory subunit
IPR029257 : Rab3GAP regulatory subunit, C-terminal
GO :
0043087 : Biological Process : regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13.5, nucl 9.5, golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000390536
(
BC131573
)
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,324,111 - 220,445,726 (121,616)
query : 1 - 4,708 (4,708/4,708)
35 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.957;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026059 : Rab3-GAP regulatory subunit
IPR029257 : Rab3GAP regulatory subunit, C-terminal
GO :
0043087 : Biological Process : regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000424031
(
AK291234
)
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,324,113 - 220,445,794 (121,682)
query : 1 - 4,777 (4,777/4,777)
35 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.957;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026059 : Rab3-GAP regulatory subunit
IPR029257 : Rab3GAP regulatory subunit, C-terminal
GO :
0043087 : Biological Process : regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000594544 (
ENST00000491005
)
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,324,525 - 220,327,402 (2,878)
query : 1 - 897 (897/897)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14, nucl 8, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000061763
(
AF004828
)
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,324,551 - 220,445,721 (121,171)
query : 1 - 4,266 (4,266/4,266)
35 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.957;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026059 : Rab3-GAP regulatory subunit
IPR029257 : Rab3GAP regulatory subunit, C-terminal
GO :
0043087 : Biological Process : regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000579237 (
ENST00000474966
)
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,324,598 - 220,327,064 (2,467)
query : 1 - 848 (848/848)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000594832 (
ENST00000491305
)
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,324,947 - 220,327,770 (2,824)
query : 1 - 843 (843/843)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 6, nucl 4, cyto_nucl 4, E.R. 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000583060 (
ENST00000478976
)
(Rab3 GTPase-activating protein non-catalytic subunit; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,358,997 - 220,445,772 (86,776)
query : 1 - 575 (575/575)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 10, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000104791 (
ENST00000237724
)
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,369,526 - 220,445,756 (76,231)
query : 1 - 821 (821/821)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 21, cyto 4.5, cyto_nucl 3.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0093901
HIT000658617 (
NR_031705
)
(Non-protein coding transcript.)
genome : 220,373,880 - 220,373,961 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0093901)
HIX0093901
HIT000398402 (
NR_002994
)
(Non-protein coding transcript.)
genome : 220,373,888 - 220,374,018 (131)
query : 1 - 131 (131/131)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0093901)
HIX0093901
HIT000508443 (
ENST00000410438
)
(Non-protein coding transcript.)
genome : 220,373,888 - 220,374,018 (131)
query : 1 - 131 (131/131)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0093901)
HIX0001603
HIT000588499 (
ENST00000484658
)
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,375,618 - 220,384,719 (9,102)
query : 1 - 515 (515/515)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 8.5, cyto_nucl 6, mito 5, nucl 2.5,
E.R._mito 2.5, mito_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000578475 (
ENST00000474178
)
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,379,249 - 220,445,712 (66,464)
query : 1 - 539 (539/539)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000579995 (
ENST00000475769
)
(Rab3 GTPase-activating protein non-catalytic subunit; RGAP-iso; Rab3 GTPase-activating protein 150 kDa subunit; Rab3-GAP p150; Rab3-GAP150; Rab3-GAP regulatory subunit;)
genome : 220,392,777 - 220,445,679 (52,903)
query : 1 - 375 (375/375)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0203726
HIT000564096
(
EF611284
)
Representative transcript
(Non-protein coding transcript.)
genome : 220,412,754 - 220,413,022 (269)
query : 4 - 272 (269/272)
1 exon
identity = 0.989
5'(0.989)3'
coverage = 0.989
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203726)
HIX0178154
HIT000523947_02 (
ENST00000426013
)
(MRG family protein.)
genome : 220,426,792 - 220,428,546 (1,755)
query : 123 - 1,880 (1,758/1,880)
1 exon
identity = 0.988
5'(0.988)3'
coverage = 0.935
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178154)
HIX0178154
HIT000203361_02 (
NM_006791
)
(MRG family protein.)
genome : 220,426,792 - 220,428,549 (1,758)
query : 118 - 1,878 (1,761/1,894)
1 exon
identity = 0.988
5'(0.988)3'
coverage = 0.937
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.5, cyto 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178154)
HIX0178154
HIT000724472_01 (
NM_001265603
)
(MRG family protein.)
genome : 220,426,792 - 220,428,549 (1,758)
query : 118 - 1,763 (1,646/1,779)
2 exons
identity = 0.984
5'(0.964;0.986)3'
coverage = 0.933
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 5, extr 3, cyto_mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178154)
HIX0178154
HIT000724474_01 (
NM_001265605
)
(MRG family protein.)
genome : 220,426,951 - 220,428,549 (1,599)
query : 130 - 1,731 (1,602/1,747)
1 exon
identity = 0.988
5'(0.988)3'
coverage = 0.924
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 5, extr 3, cyto_mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178154)
HIX0178154
HIT000672020_01 (
ENST00000558746
)
(MRG family protein.)
genome : 220,426,848 - 220,427,801 (954)
query : 1 - 873 (873/874)
2 exons
identity = 0.992
5'(0.990;0.993)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178154)
HIX0178154
HIT000672104_01 (
ENST00000558830
)
(MRG family protein.)
genome : 220,426,869 - 220,427,531 (663)
query : 1 - 616 (616/616)
2 exons
identity = 0.992
5'(0.976;0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178154)
HIX0178154
HIT000545069_02 (
ENST00000447135
)
(MRG family protein.)
genome : 220,426,912 - 220,427,883 (972)
query : 1 - 971 (971/971)
1 exon
identity = 0.965
5'(0.965)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178154)
HIX0178154
HIT000504901 (
ENST00000404582
)
(MRG domain containing protein.)
genome : 220,426,912 - 220,427,878 (967)
query : 1 - 967 (967/967)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178154)
HIX0178154
HIT000674398_01 (
ENST00000561171
)
(MRG family protein.)
genome : 220,426,920 - 220,428,327 (1,408)
query : 2 - 933 (932/933)
2 exons
identity = 0.980
5'(0.997;0.971)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, mito 11, cyto_nucl 8, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178154)
HIX0178154
HIT000671781_01 (
ENST00000558502
)
(MRG family protein.)
genome : 220,427,067 - 220,427,893 (827)
query : 29 - 855 (827/855)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 0.967
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 5, extr 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178154)
HIX0001603
HIT000099244
(
BC050630
)
(Aurora kinase B; EC=2.7.11.1; Aurora 1; Aurora- and IPL1-like midbody-associated protein 1; AIM-1; Aurora/IPL1-related kinase 2; ARK-2; Aurora-related kinase 2; STK-1; Serine/threonine-protein kinase 12; Serine/threonine-protein kinase 5; Serine/threonine-protein kinase aurora-B;)
genome : 220,439,328 - 220,445,703 (6,376)
query : 1 - 1,905 (1,905/1,923)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13, mito 7, nucl 3.5,
E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000567194 (
ENST00000462353
)
(Aurora kinase B; EC=2.7.11.1; Aurora 1; Aurora- and IPL1-like midbody-associated protein 1; AIM-1; Aurora/IPL1-related kinase 2; ARK-2; Aurora-related kinase 2; STK-1; Serine/threonine-protein kinase 12; Serine/threonine-protein kinase 5; Serine/threonine-protein kinase aurora-B;)
genome : 220,439,327 - 220,445,703 (6,377)
query : 1 - 1,906 (1,906/1,906)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13, mito 7, nucl 3.5,
E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000320723 (
NR_001587
)
(Aurora kinase B; EC=2.7.11.1; Aurora 1; Aurora- and IPL1-like midbody-associated protein 1; AIM-1; Aurora/IPL1-related kinase 2; ARK-2; Aurora-related kinase 2; STK-1; Serine/threonine-protein kinase 12; Serine/threonine-protein kinase 5; Serine/threonine-protein kinase aurora-B;)
genome : 220,439,521 - 220,441,057 (1,537)
query : 1 - 1,537 (1,537/1,537)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13, mito 7, nucl 3.5,
E.R._mito 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0001603
HIT000549739 (
ENST00000451805
)
(Aurora kinase B; EC=2.7.11.1; Aurora 1; Aurora- and IPL1-like midbody-associated protein 1; AIM-1; Aurora/IPL1-related kinase 2; ARK-2; Aurora-related kinase 2; STK-1; Serine/threonine-protein kinase 12; Serine/threonine-protein kinase 5; Serine/threonine-protein kinase aurora-B;)
genome : 220,440,048 - 220,441,259 (1,212)
query : 1 - 1,212 (1,212/1,212)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13, mito 7, nucl 3.5,
E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001603)
HIX0160512
HIT000520121 (
ENST00000422187
)
(Ku70 family protein.)
genome : 220,487,287 - 220,488,907 (1,621)
query : 1 - 1,621 (1,621/1,621)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 10.5, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160512)
HIX0029514
HIT000546049 (
ENST00000448115
)
(Conserved hypothetical protein.)
genome : 220,490,009 - 220,490,941 (933)
query : 1 - 933 (933/933)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 9, extr_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029514)
HIX0160265
HIT000511093 (
ENST00000413159
)
(Non-protein coding transcript.)
genome : 220,533,073 - 220,533,525 (453)
query : 1 - 245 (245/245)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160265)
HIX0029301
HIT000096257
(
BC040600
)
Representative transcript
(Conserved hypothetical protein.)
genome : 220,574,464 - 220,577,374 (2,911)
query : 1 - 2,907 (2,907/2,922)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 8.5, mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029301)
HIX0214260
HIT000676575 (
ENST00000563417
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 220,574,464 - 220,577,375 (2,912)
query : 1 - 2,912 (2,912/2,912)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214260)
HIX0160375
HIT000514722 (
ENST00000416788
)
(Conserved hypothetical protein.)
genome : 220,621,858 - 220,622,195 (338)
query : 1 - 338 (338/338)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160375)
HIX0160738
HIT000527212 (
ENST00000429278
)
(Non-protein coding transcript.)
genome : 220,628,496 - 220,628,654 (159)
query : 1 - 159 (159/159)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160738)
HIX0178401
HIT000555076 (
ENST00000457142
)
(PRELI/MSF1 domain containing protein.)
genome : 220,641,296 - 220,642,150 (855)
query : 1 - 540 (540/540)
2 exons
identity = 0.998
5'(1.000;0.971)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178401)
HIX0161226
HIT000544103 (
ENST00000446169
)
(Hypothetical short protein.)
genome : 220,658,446 - 220,660,385 (1,940)
query : 1 - 390 (390/390)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 5, cyto 2, golg 2, cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161226)
HIX0213788
HIT000263163
(
BC068608
)
(Serine/threonine-protein kinase MARK1.)
genome : 220,701,525 - 220,756,240 (54,716)
query : 1 - 2,729 (2,729/2,765)
3 exons
identity = 1.000
5'(1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 17, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213788)
HIX0213788
HIT000022947
(
AK098103
)
Representative transcript
(Serine/threonine-protein kinase MARK1.)
genome : 220,701,801 - 220,756,233 (54,433)
query : 1 - 2,311 (2,311/2,311)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 17, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213788)
HIX0213788
HIT000576514 (
ENST00000472121
)
(Conserved hypothetical protein.)
genome : 220,701,801 - 220,756,233 (54,433)
query : 1 - 2,312 (2,312/2,312)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 17, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213788)
HIX0213788
HIT000588927 (
ENST00000485104
)
(Conserved hypothetical protein.)
genome : 220,702,192 - 220,752,850 (50,659)
query : 1 - 270 (270/270)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, extr 8, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213788)
HIX0213738
HIT000010765
(
AK027493
)
Representative transcript
(Kinase associated domain 1 (KA1) containing protein.)
genome : 220,777,408 - 220,836,289 (58,882)
query : 21 - 2,720 (2,700/2,720)
12 exons
identity = 0.998
5'(1.000;1.000;0.996;1.000)3'
coverage = 0.993
InterPro :
IPR001772 : Kinase associated domain 1 (KA1)
IPR008271 : Serine/threonine-protein kinase, active site
IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
IPR028375 : KA1 domain/Ssp2 C-terminal domain
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213738)
HIX0200204
HIT000551595 (
ENST00000453661
)
(Histone deacetylase family protein.)
genome : 220,799,082 - 220,800,790 (1,709)
query : 1 - 1,398 (1,398/1,398)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 22, cyto_nucl 18.5, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200204)
HIX0001597
HIT000348208 (
ENST00000366928
)
(Lysophospholipase-like protein 1; EC=3.1.2.-;)
genome : 219,347,186 - 219,386,207 (39,022)
query : 1 - 1,898 (1,898/1,898)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 10, cyto_nucl 10, mito_pero 7.33333,
E.R._mito 5.83333, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001597)
HIX0001597
HIT000212553 (
NM_138794
)
(Lysophospholipase-like protein 1; EC=3.1.2.-;)
genome : 219,347,192 - 219,386,207 (39,016)
query : 1 - 1,892 (1,892/1,892)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;0.991;1.000)3'
coverage = 1.000
EC number :
EC 3.1.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 10.5, mito 9, mito_pero 6.83333,
E.R._mito 5.33333, nucl 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001597)
HIX0001597
HIT000565448 (
ENST00000460522
)
(Lysophospholipase-like protein 1; EC=3.1.2.-;)
genome : 219,347,211 - 219,386,207 (38,997)
query : 1 - 1,703 (1,703/1,703)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 8, nucl 3.5, cyto_nucl 3.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001597)
HIX0001597
HIT000043501
(
AK123628
)
(Lysophospholipase-like protein 1.)
genome : 219,347,211 - 219,386,199 (38,989)
query : 1 - 1,695 (1,695/1,695)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.2.-
InterPro :
IPR003140 : Phospholipase/carboxylesterase/thioesterase
IPR029058 : Alpha/Beta hydrolase fold
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 7, cyto_nucl 7, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001597)
HIX0001597
HIT000428555
(
AK309689
)
(Lysophospholipase-like protein 1.)
genome : 219,347,211 - 219,385,806 (38,596)
query : 1 - 1,319 (1,319/1,319)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.2.-
InterPro :
IPR003140 : Phospholipase/carboxylesterase/thioesterase
IPR029058 : Alpha/Beta hydrolase fold
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17.5, mito_pero 10, cyto 6.5, cyto_nucl 6,
extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001597)
HIX0001597
HIT000348207 (
ENST00000366927
)
(Lysophospholipase-like protein 1; EC=3.1.2.-;)
genome : 219,347,217 - 219,386,207 (38,991)
query : 1 - 1,819 (1,819/1,819)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 10, cyto_nucl 10, mito_pero 7.33333,
E.R._mito 5.83333, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001597)
HIX0001597
HIT000424339
(
AK291542
)
(Lysophospholipase-like protein 1; EC=3.1.2.-;)
genome : 219,347,220 - 219,385,608 (38,389)
query : 2 - 1,266 (1,265/1,266)
5 exons
identity = 0.998
5'(1.000;0.990;1.000;0.991;1.000)3'
coverage = 0.999
EC number :
EC 3.1.2.-
InterPro :
IPR003140 : Phospholipase/carboxylesterase/thioesterase
IPR029058 : Alpha/Beta hydrolase fold
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 10.1667, mito 10, cyto_nucl 10, cyto 9.5,
nucl 7.5, mito_pero 7.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001597)
HIX0001597
HIT000037647
(
BC016711
)
(Lysophospholipase-like protein 1; EC=3.1.2.-;)
genome : 219,347,223 - 219,385,159 (37,937)
query : 5 - 817 (813/845)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.995
EC number :
EC 3.1.2.-
InterPro :
IPR003140 : Phospholipase/carboxylesterase/thioesterase
IPR029058 : Alpha/Beta hydrolase fold
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 10.5, mito 9, mito_pero 6.83333,
E.R._mito 5.33333, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001597)
HIX0001597
HIT000582062 (
ENST00000477938
)
(Lysophospholipase-like protein 1.)
genome : 219,347,226 - 219,386,207 (38,982)
query : 1 - 1,715 (1,715/1,715)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 9.5, cyto 7.5, nucl 6.5,
extr_plas 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001597)
HIX0001597
HIT000049184
(
AK129913
)
Representative transcript
(Lysophospholipase-like protein 1.)
genome : 219,347,226 - 219,386,199 (38,974)
query : 1 - 1,707 (1,707/1,707)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.2.-
InterPro :
IPR003140 : Phospholipase/carboxylesterase/thioesterase
IPR029058 : Alpha/Beta hydrolase fold
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 4, cyto_nucl 3.33333, cyto_pero 2.83333,
mito 2.5, lyso 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001597)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171582
Mus
sp. (Mouse) : AK148533
Bos
sp. (Cow) : BC142402
Gallus
sp. (Chicken) : BX931356
Tetraodon
sp. (Tetraodon) : CR684952
Pongo
sp. (Orangutan) : CR859831
Equus
sp. (Horse) : ENSECAT00000013064
Takifugu
sp. (Fugu) : SINFRUT00000155173
Monodelphis
sp. (Opossum) : XM_001375482
Rattus
sp. (Rat) : XM_213970
Pan
sp. (Chimpanzee) : XM_514204
Canis
sp. (Dog) : XM_545715
HIX0001597
HIT000251973
(
AY341430
)
(Lysophospholipase-like protein 1.)
genome : 219,347,233 - 219,385,070 (37,838)
query : 1 - 666 (666/666)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
EC number :
EC 3.1.2.-
InterPro :
IPR003140 : Phospholipase/carboxylesterase/thioesterase
IPR029058 : Alpha/Beta hydrolase fold
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 10.5, mito 9, mito_pero 6.83333,
E.R._mito 5.33333, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001597)
HIX0001597
HIT000568735 (
ENST00000463964
)
(Lysophospholipase-like protein 1; EC=3.1.2.-;)
genome : 219,347,237 - 219,386,207 (38,971)
query : 1 - 1,874 (1,874/1,874)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, mito_pero 10.5, cyto 8, cyto_nucl 6.5,
pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001597)
HIX0001597
HIT000587514 (
ENST00000483635
)
(Lysophospholipase-like protein 1; EC=3.1.2.-;)
genome : 219,347,238 - 219,386,207 (38,970)
query : 1 - 2,169 (2,169/2,169)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 12.5, extr 4, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001597)
HIX0001597
HIT000578673 (
ENST00000474379
)
(Lysophospholipase-like protein 1; EC=3.1.2.-;)
genome : 219,347,269 - 219,386,207 (38,939)
query : 1 - 1,662 (1,662/1,662)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, extr 8, nucl 7.5,
E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001597)
HIX0001597
HIT000574107 (
ENST00000469590
)
(Lysophospholipase-like protein 1; EC=3.1.2.-;)
genome : 219,347,536 - 219,386,207 (38,672)
query : 1 - 1,701 (1,701/1,701)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 8, nucl 3.5, cyto_nucl 3.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001597)
HIX0001597
HIT000582886 (
ENST00000478794
)
(Lysophospholipase-like protein 1; EC=3.1.2.-;)
genome : 219,348,313 - 219,384,872 (36,560)
query : 1 - 475 (475/475)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 11.5, extr 4, E.R. 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001597)
HIX0001604
HIT000207352 (
NM_018650
)
(Serine/threonine-protein kinase MARK1; EC=2.7.11.1; EC=2.7.11.26; MAP/microtubule affinity-regulating kinase 1; PAR1 homolog c; Par-1c; Par1c;)
genome : 220,701,568 - 220,837,799 (136,232)
query : 1 - 5,276 (5,276/5,293)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001604)
HIX0001604
HIT000348198 (
ENST00000366918
)
(Serine/threonine-protein kinase MARK1.)
genome : 220,701,568 - 220,837,803 (136,236)
query : 1 - 5,169 (5,169/5,169)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001604)
HIX0001604
HIT000504171 (
ENST00000402574
)
(Serine/threonine-protein kinase MARK1; EC=2.7.11.1; EC=2.7.11.26; MAP/microtubule affinity-regulating kinase 1; PAR1 homolog c; Par-1c; Par1c;)
genome : 220,701,568 - 220,837,798 (136,231)
query : 1 - 5,230 (5,230/5,230)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001604)
HIX0001604
HIT000001192
(
AB040910
)
(Serine/threonine-protein kinase MARK1.)
genome : 220,701,568 - 220,837,272 (135,705)
query : 1 - 4,638 (4,638/4,638)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001604)
HIX0001604
HIT000433480
(
AK314614
)
(Serine/threonine-protein kinase MARK1; EC=2.7.11.1; EC=2.7.11.26; MAP/microtubule affinity-regulating kinase 1; PAR1 homolog c; Par-1c; Par1c;)
genome : 220,701,866 - 220,835,508 (133,643)
query : 2 - 2,691 (2,690/2,691)
18 exons
identity = 1.000
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR001772 : Kinase associated domain 1 (KA1)
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
IPR028375 : KA1 domain/Ssp2 C-terminal domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001604)
HIX0001604
HIT000071900
(
AF154845
)
(Serine/threonine-protein kinase MARK1; EC=2.7.11.1; EC=2.7.11.26; MAP/microtubule affinity-regulating kinase 1; PAR1 homolog c; Par-1c; Par1c;)
genome : 220,701,899 - 220,835,800 (133,902)
query : 1 - 2,946 (2,946/2,965)
18 exons
identity = 0.994
5'(0.953;0.990;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR001772 : Kinase associated domain 1 (KA1)
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
IPR028375 : KA1 domain/Ssp2 C-terminal domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001604)
HIX0001604
HIT000348197 (
ENST00000366917
)
(Serine/threonine-protein kinase MARK1; EC=2.7.11.1; EC=2.7.11.26; MAP/microtubule affinity-regulating kinase 1; PAR1 homolog c; Par-1c; Par1c;)
genome : 220,701,899 - 220,835,800 (133,902)
query : 1 - 2,946 (2,946/2,946)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001604)
HIX0001604
HIT000340594
(
BC113869
)
Representative transcript
(Serine/threonine-protein kinase MARK1; EC=2.7.11.1; EC=2.7.11.26; MAP/microtubule affinity-regulating kinase 1; PAR1 homolog c; Par-1c; Par1c;)
genome : 220,701,989 - 220,836,896 (134,908)
query : 1 - 3,951 (3,951/3,951)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR001772 : Kinase associated domain 1 (KA1)
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
IPR028375 : KA1 domain/Ssp2 C-terminal domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001604)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF453686
Danio
sp. (Zebrafish) : BC047179
Gallus
sp. (Chicken) : BX950636
Bos
sp. (Cow) : ENSBTAT00000010291
Oryzias
sp. (Medaka) : ENSORLT00000008953
Pongo
sp. (Orangutan) : ENSPPYT00000000225
Tetraodon
sp. (Tetraodon) : GSTENT00016468001
Takifugu
sp. (Fugu) : SINFRUT00000170848
Pan
sp. (Chimpanzee) : XM_001172795
Monodelphis
sp. (Opossum) : XM_001375730
Equus
sp. (Horse) : XM_001488908
Canis
sp. (Dog) : XM_536123
Macaca
sp. (Macaque) : XR_012270
Rattus
sp. (Rat) : Z83868
HIX0001604
HIT000340704
(
BC114478
)
(Serine/threonine-protein kinase MARK1; EC=2.7.11.1; EC=2.7.11.26; MAP/microtubule affinity-regulating kinase 1; PAR1 homolog c; Par-1c; Par1c;)
genome : 220,701,989 - 220,836,896 (134,908)
query : 1 - 3,951 (3,951/3,951)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR001772 : Kinase associated domain 1 (KA1)
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
IPR028375 : KA1 domain/Ssp2 C-terminal domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001604)
HIX0001604
HIT000490130
(
AK295506
)
(Serine/threonine-protein kinase MARK1; EC=2.7.11.1; EC=2.7.11.26; MAP/microtubule affinity-regulating kinase 1; PAR1 homolog c; Par-1c; Par1c;)
genome : 220,702,027 - 220,835,791 (133,765)
query : 1 - 2,764 (2,764/2,764)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR001772 : Kinase associated domain 1 (KA1)
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
IPR028375 : KA1 domain/Ssp2 C-terminal domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001604)
AC092808.2
219200001-219275078 F +
NCBI
AL360093.11
219275079-219414234 F +
NCBI
AC096642.2
219414235-219589287 F -
NCBI
AL513283.9
219589288-219688878 F +
NCBI
AL356364.18
219688879-219789512 F +
NCBI
AC096643.2
219789513-219951474 F +
NCBI
AC093562.3
219951475-220120384 F +
NCBI
AL360008.10
220120385-220122378 F +
NCBI
AC103590.2
220122379-220333434 F +
NCBI
AL445435.11
220333435-220467460 F +
NCBI
AL451081.5
220467461-220541653 F +
NCBI
AC096644.2
220541654-220691553 F +
NCBI
AC096640.2
220691554-220799403 F +
NCBI
AL592406.4
220799404-220800000 F +
NCBI