bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0001707
HIT000019886
(
AK095031
)
Representative transcript
(Solute carrier family 35 member F3.)
genome : 234,040,679 - 234,460,262 (419,584)
query : 3 - 2,893 (2,891/2,893)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR000620 : EamA domain
IPR026505 : Solute carrier family 35 member F3/F4
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001707)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168222
Mus
sp. (Mouse) : AK046359
Gallus
sp. (Chicken) : BX929776
Danio
sp. (Zebrafish) : ENSDART00000083657
Equus
sp. (Horse) : ENSECAT00000007303
Oryzias
sp. (Medaka) : ENSORLT00000013219
Pongo
sp. (Orangutan) : ENSPPYT00000000113
Pan
sp. (Chimpanzee) : ENSPTRT00000003879
Tetraodon
sp. (Tetraodon) : GSTENT00030720001
Takifugu
sp. (Fugu) : SINFRUT00000148235
Monodelphis
sp. (Opossum) : XM_001368913
Canis
sp. (Dog) : XM_546081
Bos
sp. (Cow) : XM_618568
HIX0001707
HIT000214893 (
NM_173508
)
(Solute carrier family 35 member F3.)
genome : 234,040,679 - 234,460,262 (419,584)
query : 1 - 2,891 (2,891/2,891)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001707)
HIX0001707
HIT000347898 (
ENST00000366618
)
(Solute carrier family 35 member F3.)
genome : 234,040,679 - 234,460,262 (419,584)
query : 1 - 2,891 (2,891/2,891)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001707)
HIX0001708
HIT000011340
(
AK054726
)
Representative transcript
(Hypothetical protein.)
genome : 234,348,352 - 234,350,834 (2,483)
query : 1 - 1,723 (1,723/1,723)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, cyto 7, cyto_nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001708)
HIX0001708
HIT000510417 (
ENST00000412483
)
(Hypothetical protein.)
genome : 234,348,352 - 234,350,834 (2,483)
query : 1 - 1,723 (1,723/1,723)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto_nucl 4.5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001708)
HIX0001707
HIT000051959
(
BC037878
)
(Solute carrier family 35 member F3.)
genome : 234,350,017 - 234,460,256 (110,240)
query : 5 - 2,765 (2,761/2,780)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;0.992;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR000620 : EamA domain
IPR026505 : Solute carrier family 35 member F3/F4
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001707)
HIX0001707
HIT000347897 (
ENST00000366617
)
(Solute carrier family 35 member F3.)
genome : 234,350,017 - 234,460,257 (110,241)
query : 1 - 2,762 (2,762/2,762)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, E.R. 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001707)
HIX0161505
HIT000554012 (
ENST00000456078
)
(Hypothetical short protein.)
genome : 234,397,452 - 234,410,211 (12,760)
query : 1 - 452 (452/452)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 9.5, cyto 9, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161505)
HIX0023612
HIT000544367 (
ENST00000446433
)
(Conserved hypothetical protein.)
genome : 234,404,329 - 234,408,246 (3,918)
query : 1 - 388 (388/388)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 16, extr 10, cyto_mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023612)
HIX0023612
HIT000050299
(
AK131028
)
(Hypothetical short protein.)
genome : 234,406,153 - 234,406,808 (656)
query : 1 - 656 (656/656)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto_nucl 2.83333, nucl 2.5, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023612)
HIX0023612
HIT000093509
(
BC034622
)
Representative transcript
(Conserved hypothetical protein.)
genome : 234,406,244 - 234,408,756 (2,513)
query : 1 - 2,513 (2,513/2,553)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023612)
HIX0160257
HIT000510849 (
ENST00000412915
)
(Ribosomal protein L6, alpha-beta domain containing protein.)
genome : 234,420,718 - 234,421,287 (570)
query : 1 - 570 (570/570)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto_nucl 3, nucl 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160257)
HIX0214069
HIT000695165 (
ENST00000583284
)
(Non-protein coding transcript.)
genome : 234,442,213 - 234,442,285 (73)
query : 1 - 73 (73/73)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214069)
HIX0214069
HIT000725881 (
NR_039818
)
(Non-protein coding transcript.)
genome : 234,442,213 - 234,442,285 (73)
query : 1 - 73 (73/73)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214069)
HIX0160537
HIT000520892 (
ENST00000422958
)
(Ribosomal protein S19/S15 family protein.)
genome : 234,492,450 - 234,492,887 (438)
query : 1 - 438 (438/438)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160537)
HIX0160602
HIT000523038 (
ENST00000425104
)
(Conserved hypothetical protein.)
genome : 234,492,752 - 234,501,574 (8,823)
query : 1 - 410 (410/410)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160602)
HIX0028722
HIT000549729 (
ENST00000451795
)
(Conserved hypothetical protein.)
genome : 234,508,553 - 234,509,339 (787)
query : 1 - 575 (575/575)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 7.5, E.R._mito 7.5, mito_pero 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028722)
HIX0028722
HIT000347895 (
ENST00000366615
)
(Cytochrome c oxidase assembly factor 6 homolog isoform 2.)
genome : 234,509,202 - 234,519,795 (10,594)
query : 1 - 710 (710/710)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, mito_nucl 13.1667, nucl 9.5,
cyto_nucl 6.83333, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028722)
HIX0028722
HIT000657268 (
NM_001206641
)
(Cytochrome c oxidase assembly factor 6 homolog isoform 2.)
genome : 234,509,214 - 234,519,795 (10,582)
query : 1 - 698 (698/710)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, nucl 3, cyto_mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028722)
HIX0028722
HIT000094175
(
BC035925
)
(Cytochrome c oxidase assembly factor 6 homolog isoform 2.)
genome : 234,509,280 - 234,519,793 (10,514)
query : 11 - 640 (630/655)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.983
InterPro :
IPR003213 : Cytochrome c oxidase, subunit VIb
GO :
0004129 : Molecular Function : cytochrome-c oxidase activity
0005739 : Cellular Component : mitochondrion
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, nucl 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028722)
HIX0028722
HIT000259222
(
BC052810
)
(Cytochrome c oxidase assembly factor 6 homolog isoform 2.)
genome : 234,509,275 - 234,519,791 (10,517)
query : 1 - 633 (633/729)
3 exons
identity = 0.998
5'(1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR003213 : Cytochrome c oxidase, subunit VIb
GO :
0004129 : Molecular Function : cytochrome-c oxidase activity
0005739 : Cellular Component : mitochondrion
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, extr 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028722)
HIX0028722
HIT000365210 (
NM_001012985
)
(Cytochrome c oxidase assembly factor 6 homolog;)
genome : 234,509,429 - 234,519,795 (10,367)
query : 1 - 645 (645/657)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 5, cyto 4, mito_nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028722)
HIX0028722
HIT000340825
(
BC116455
)
Representative transcript
(Cytochrome c oxidase assembly factor 6 homolog;)
genome : 234,509,429 - 234,519,791 (10,363)
query : 1 - 641 (641/655)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003213 : Cytochrome c oxidase, subunit VIb
GO :
0004129 : Molecular Function : cytochrome-c oxidase activity
0005739 : Cellular Component : mitochondrion
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 5, cyto 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028722)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC046907
Bos
sp. (Cow) : BC149749
Gallus
sp. (Chicken) : BX930657
Canis
sp. (Dog) : ENSCAFT00000036867
Monodelphis
sp. (Opossum) : ENSMODT00000010788
Oryzias
sp. (Medaka) : ENSORLT00000018293
Pongo
sp. (Orangutan) : ENSPPYT00000000112
Rattus
sp. (Rat) : ENSRNOT00000055182
Pan
sp. (Chimpanzee) : XM_001152917
Danio
sp. (Zebrafish) : XM_001923245
HIX0028722
HIT000347893 (
ENST00000366613
)
(Cytochrome c oxidase assembly factor 6 homolog;)
genome : 234,509,429 - 234,519,791 (10,363)
query : 1 - 641 (641/641)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 5, cyto 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028722)
HIX0028722
HIT000261614
(
BC064905
)
(Cytochrome c oxidase assembly factor 6 homolog isoform 2.)
genome : 234,509,447 - 234,519,792 (10,346)
query : 1 - 1,015 (1,015/1,029)
2 exons
identity = 0.998
5'(0.997;1.000)3'
coverage = 0.999
InterPro :
IPR003213 : Cytochrome c oxidase, subunit VIb
GO :
0004129 : Molecular Function : cytochrome-c oxidase activity
0005739 : Cellular Component : mitochondrion
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, nucl 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028722)
HIX0028722
HIT000347892 (
ENST00000366612
)
(Cytochrome c oxidase assembly factor 6 homolog isoform 2.)
genome : 234,509,447 - 234,519,792 (10,346)
query : 1 - 1,013 (1,013/1,013)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, nucl 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028722)
HIX0028722
HIT000091131
(
BC025793
)
(Cytochrome c oxidase assembly factor 6 homolog isoform 2.)
genome : 234,509,533 - 234,519,791 (10,259)
query : 12 - 548 (537/568)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.980
InterPro :
IPR003213 : Cytochrome c oxidase, subunit VIb
GO :
0004129 : Molecular Function : cytochrome-c oxidase activity
0005739 : Cellular Component : mitochondrion
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, nucl 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028722)
HIX0019828
HIT000219610
(
U38847
)
Representative transcript
(Probable methyltransferase TARBP1; EC=2.1.1.-; TAR RNA-binding protein 1; TAR RNA-binding protein of 185 kDa; TRP-185;)
genome : 234,527,091 - 234,614,849 (87,759)
query : 1 - 5,098 (5,098/5,173)
30 exons
identity = 0.999
3'(1.000;1.000;1.000;0.990;1.000;1.000;1.000;
0.989;1.000;0.991;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)5'
coverage = 0.999
EC number :
EC 2.1.1.-
InterPro :
IPR001537 : tRNA/rRNA methyltransferase, SpoU type
IPR025806 : Probable methyltransferase TARBP1
IPR029026 : tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 : Alpha/beta knot methyltransferases
GO :
0003723 : Molecular Function : RNA binding
0006396 : Biological Process : RNA processing
0008173 : Molecular Function : RNA methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 6.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019828)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : ENSCAFT00000018299
Monodelphis
sp. (Opossum) : ENSMODT00000010779
Oryzias
sp. (Medaka) : ENSORLT00000013198
Pongo
sp. (Orangutan) : ENSPPYT00000000111
Tetraodon
sp. (Tetraodon) : GSTENT00030716001
Takifugu
sp. (Fugu) : SINFRUT00000148251
Macaca
sp. (Macaque) : XM_001102931
Equus
sp. (Horse) : XM_001916573
Danio
sp. (Zebrafish) : XM_001921839
Gallus
sp. (Chicken) : XM_419559
Pan
sp. (Chimpanzee) : XM_514281
Bos
sp. (Cow) : XM_614988
Gallus
sp. (Chicken) : XR_027110
HIX0019828
HIT000088904
(
BC016023
)
(Probable methyltransferase TARBP1; EC=2.1.1.-; TAR RNA-binding protein 1; TAR RNA-binding protein of 185 kDa; TRP-185;)
genome : 234,527,124 - 234,542,126 (15,003)
query : 4 - 1,654 (1,651/1,736)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)5'
coverage = 0.998
EC number :
EC 2.1.1.-
InterPro :
IPR001537 : tRNA/rRNA methyltransferase, SpoU type
IPR029026 : tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 : Alpha/beta knot methyltransferases
GO :
0003723 : Molecular Function : RNA binding
0006396 : Biological Process : RNA processing
0008173 : Molecular Function : RNA methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17.5, mito_pero 11, cyto 4.5, extr 4,
cyto_nucl 4, pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019828)
HIX0019828
HIT000102315 (
ENST00000040877
)
(Probable methyltransferase TARBP1; EC=2.1.1.-; TAR RNA-binding protein 1; TAR RNA-binding protein of 185 kDa; TRP-185;)
genome : 234,527,059 - 234,614,849 (87,791)
query : 1 - 5,130 (5,130/5,130)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 6.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019828)
HIX0019828
HIT000202322 (
NM_005646
)
(Probable methyltransferase TARBP1; EC=2.1.1.-; TAR RNA-binding protein 1; TAR RNA-binding protein of 185 kDa; TRP-185;)
genome : 234,527,059 - 234,614,849 (87,791)
query : 1 - 5,130 (5,130/5,130)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 6.5, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019828)
HIX0019828
HIT000011658
(
AK055044
)
(Probable methyltransferase TARBP1; EC=2.1.1.-; TAR RNA-binding protein 1; TAR RNA-binding protein of 185 kDa; TRP-185;)
genome : 234,527,085 - 234,543,701 (16,617)
query : 1 - 3,086 (3,086/3,086)
7 exons
identity = 0.998
3'(1.000;0.993;1.000;1.000;1.000;1.000;0.998)5'
coverage = 1.000
EC number :
EC 2.1.1.-
InterPro :
IPR001537 : tRNA/rRNA methyltransferase, SpoU type
IPR029026 : tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 : Alpha/beta knot methyltransferases
GO :
0003723 : Molecular Function : RNA binding
0006396 : Biological Process : RNA processing
0008173 : Molecular Function : RNA methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 9, extr_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019828)
HIX0019828
HIT000587296 (
ENST00000483404
)
(Probable methyltransferase TARBP1; EC=2.1.1.-; TAR RNA-binding protein 1; TAR RNA-binding protein of 185 kDa; TRP-185;)
genome : 234,527,085 - 234,543,701 (16,617)
query : 1 - 3,082 (3,082/3,082)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_mito 6, mito 5.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019828)
HIX0019828
HIT000567104 (
ENST00000462259
)
(Probable methyltransferase TARBP1; EC=2.1.1.-; TAR RNA-binding protein 1; TAR RNA-binding protein of 185 kDa; TRP-185;)
genome : 234,527,124 - 234,542,126 (15,003)
query : 1 - 1,650 (1,650/1,650)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17.5, mito_pero 11, cyto 4.5, extr 4,
cyto_nucl 4, pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019828)
HIX0019828
HIT000599983 (
ENST00000496673
)
(Probable methyltransferase TARBP1; EC=2.1.1.-; TAR RNA-binding protein 1; TAR RNA-binding protein of 185 kDa; TRP-185;)
genome : 234,527,156 - 234,536,962 (9,807)
query : 1 - 873 (873/873)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 17, mito 9, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019828)
HIX0019828
HIT000576319 (
ENST00000471918
)
(Probable methyltransferase TARBP1; EC=2.1.1.-; TAR RNA-binding protein 1; TAR RNA-binding protein of 185 kDa; TRP-185;)
genome : 234,527,344 - 234,528,470 (1,127)
query : 1 - 457 (457/457)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14, extr 6, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019828)
HIX0019828
HIT000588304 (
ENST00000484454
)
(Probable methyltransferase TARBP1; EC=2.1.1.-; TAR RNA-binding protein 1; TAR RNA-binding protein of 185 kDa; TRP-185;)
genome : 234,533,924 - 234,536,648 (2,725)
query : 1 - 426 (426/426)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, mito 11, cyto 10, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019828)
HIX0019828
HIT000572659 (
ENST00000468077
)
(Probable methyltransferase TARBP1; EC=2.1.1.-; TAR RNA-binding protein 1; TAR RNA-binding protein of 185 kDa; TRP-185;)
genome : 234,534,128 - 234,541,739 (7,612)
query : 1 - 514 (514/514)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13.5, extr 6, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019828)
HIX0019828
HIT000585164 (
ENST00000481183
)
(Probable methyltransferase TARBP1; EC=2.1.1.-; TAR RNA-binding protein 1; TAR RNA-binding protein of 185 kDa; TRP-185;)
genome : 234,535,997 - 234,546,277 (10,281)
query : 1 - 535 (535/535)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_pero 10.8333, cyto_nucl 9.16667,
extr 6, mito 4, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019828)
HIX0019828
HIT000568571 (
ENST00000463793
)
(Probable methyltransferase TARBP1; EC=2.1.1.-; TAR RNA-binding protein 1; TAR RNA-binding protein of 185 kDa; TRP-185;)
genome : 234,546,150 - 234,556,560 (10,411)
query : 1 - 391 (391/391)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11, extr 5, mito 5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019828)
HIX0114289
pHIT000003609 ( pHIT000003609 )
Representative transcript
(Hypothetical short protein.)
genome : 234,658,855 - 234,658,968 (114)
query : 1 - 114 (114/114)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0114289)
CAGE tag :
H21BA51N1403
HIX0001709
HIT000096060
(
BC040195
)
Representative transcript
(Conserved hypothetical protein.)
genome : 234,663,637 - 234,667,525 (3,889)
query : 1 - 2,857 (2,857/2,872)
3 exons
identity = 0.997
3'(0.997;1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8, cyto_nucl 6.5, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001709)
HIX0001709
HIT000533508 (
ENST00000435574
)
(Conserved hypothetical protein.)
genome : 234,663,637 - 234,667,525 (3,889)
query : 1 - 2,860 (2,860/2,860)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8, cyto_nucl 6.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001709)
HIX0001709
HIT000660358 (
NR_038426
)
(Conserved hypothetical protein.)
genome : 234,663,637 - 234,667,525 (3,889)
query : 1 - 2,860 (2,860/2,860)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8, cyto_nucl 6.5, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001709)
HIX0001709
HIT000519141 (
ENST00000421207
)
(Conserved hypothetical protein.)
genome : 234,665,688 - 234,667,511 (1,824)
query : 1 - 805 (805/805)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001709)
HIX0001709
HIT000019870
(
AK095015
)
(Conserved hypothetical protein.)
genome : 234,666,768 - 234,669,619 (2,852)
query : 1 - 2,852 (2,852/2,854)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, mito 6, cyto 5, mito_pero 5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001709)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001150983
HIX0160745
HIT000527441 (
ENST00000429507
)
(Conserved hypothetical protein.)
genome : 234,701,044 - 234,705,834 (4,791)
query : 1 - 390 (390/390)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 10.5, cyto 10.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160745)
HIX0018355
HIT000013544
(
AK056930
)
Representative transcript
(Conserved hypothetical protein.)
genome : 234,740,015 - 234,742,205 (2,191)
query : 30 - 2,229 (2,200/2,242)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018355)
HIX0213743
HIT000259275
(
BC053539
)
(Conserved hypothetical protein.)
genome : 234,740,016 - 234,742,193 (2,178)
query : 1 - 2,187 (2,187/2,213)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213743)
HIX0213743
HIT000097026
(
BC041989
)
Representative transcript
(Conserved hypothetical protein.)
genome : 234,740,023 - 234,742,254 (2,232)
query : 1 - 2,243 (2,243/2,259)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213743)
HIX0213743
HIT000011478
(
AK054864
)
(Conserved hypothetical protein.)
genome : 234,740,017 - 234,741,688 (1,672)
query : 1 - 1,681 (1,681/1,681)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213743)
HIX0213914
HIT000494392
(
AK299768
)
(Interferon regulatory factor 2-binding protein 2; IRF-2-binding protein 2; IRF-2BP2;)
genome : 234,742,433 - 234,743,840 (1,408)
query : 1 - 1,408 (1,408/1,408)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_nucl 2, nucl 1.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213914)
HIX0213914
HIT000262040
(
BC065759
)
Representative transcript
(Interferon regulatory factor 2-binding protein 2; IRF-2-binding protein 2; IRF-2BP2;)
genome : 234,742,496 - 234,745,232 (2,737)
query : 2 - 955 (954/982)
2 exons
identity = 0.999
3'(1.000;0.985)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213914)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK087491
Danio
sp. (Zebrafish) : BC046025
Oryzias
sp. (Medaka) : ENSORLT00000001481
Pongo
sp. (Orangutan) : ENSPPYT00000000110
Tetraodon
sp. (Tetraodon) : GSTENT00030864001
Takifugu
sp. (Fugu) : SINFRUT00000147595
Monodelphis
sp. (Opossum) : XM_001378637
Equus
sp. (Horse) : XM_001916562
Gallus
sp. (Chicken) : XM_426142
Pan
sp. (Chimpanzee) : XM_525097
Canis
sp. (Dog) : XM_844348
Bos
sp. (Cow) : XR_027461
HIX0213914
HIT000533973 (
ENST00000436039
)
(Interferon regulatory factor 2-binding protein 2; IRF-2-binding protein 2; IRF-2BP2;)
genome : 234,742,754 - 234,745,229 (2,476)
query : 1 - 693 (693/693)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213914)
HIX0213914
HIT000251352
(
AY278023
)
(Interferon regulatory factor 2-binding protein 2; IRF-2-binding protein 2; IRF-2BP2;)
genome : 234,742,778 - 234,745,271 (2,494)
query : 1 - 1,900 (1,900/1,900)
2 exons
identity = 0.997
3'(1.000;0.995)5'
coverage = 1.000
InterPro :
IPR022750 : Interferon regulatory factor 2-binding protein 1 &
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 12.3333, extr 5, mito 4.5,
cyto_mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213914)
HIX0213914
HIT000251353
(
AY278024
)
(Interferon regulatory factor 2-binding protein 2; IRF-2-binding protein 2; IRF-2BP2;)
genome : 234,742,778 - 234,745,271 (2,494)
query : 1 - 1,852 (1,852/1,852)
2 exons
identity = 0.995
3'(1.000;0.991)5'
coverage = 1.000
InterPro :
IPR022750 : Interferon regulatory factor 2-binding protein 1 &
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 12.8333, extr 5, mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213914)
HIX0213914
HIT000594954 (
ENST00000491430
)
(Interferon regulatory factor 2-binding protein 2; IRF-2-binding protein 2; IRF-2BP2;)
genome : 234,742,977 - 234,743,840 (864)
query : 1 - 683 (683/683)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 7, cyto_nucl 6.33333, extr 5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213914)
HIX0029068
HIT000659084 (
NR_033927
)
(Conserved hypothetical protein.)
genome : 234,765,057 - 234,770,526 (5,470)
query : 1 - 2,270 (2,270/2,281)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029068)
HIX0029068
HIT000527203 (
ENST00000429269
)
(Conserved hypothetical protein.)
genome : 234,765,057 - 234,770,526 (5,470)
query : 1 - 2,270 (2,270/2,270)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029068)
HIX0029068
HIT000247907
(
AJ421679
)
Representative transcript
(Conserved hypothetical protein.)
genome : 234,768,753 - 234,770,526 (1,774)
query : 1 - 1,773 (1,773/1,791)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 15, cyto_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029068)
HIX0020654
HIT000092539
(
BC032040
)
Representative transcript
(Hypothetical short protein.)
genome : 234,782,035 - 234,796,670 (14,636)
query : 1 - 1,373 (1,373/1,387)
4 exons
identity = 0.997
5'(1.000;1.000;0.984;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.6667, cyto 16.5, cyto_plas 10.5,
nucl 7.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020654)
HIX0020654
HIT000515739 (
ENST00000417805
)
(Conserved hypothetical protein.)
genome : 234,782,035 - 234,796,670 (14,636)
query : 1 - 1,373 (1,373/1,373)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.6667, cyto 16.5, cyto_plas 10.5,
nucl 7.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020654)
HIX0020654
HIT000546946 (
ENST00000449012
)
(Conserved hypothetical protein.)
genome : 234,791,871 - 234,816,868 (24,998)
query : 1 - 421 (421/421)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13.5, extr 9, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020654)
HIX0020654
HIT000014790
(
AK058184
)
(Conserved hypothetical protein.)
genome : 234,796,017 - 234,802,850 (6,834)
query : 1 - 933 (933/933)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17, plas 6, extr 3, mito 3, cysk_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020654)
HIX0020654
HIT000539294 (
ENST00000441360
)
(Conserved hypothetical protein.)
genome : 234,796,017 - 234,802,850 (6,834)
query : 1 - 933 (933/933)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, plas 6, cyto_golg 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020654)
HIX0023761
HIT000047631
(
AK127758
)
Representative transcript
(Hypothetical protein.)
genome : 234,805,269 - 234,831,900 (26,632)
query : 1 - 3,565 (3,565/3,565)
2 exons
identity = 0.999
5'(0.999;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 5.83333, cyto 5.5, nucl 4,
cyto_pero 3.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023761)
HIX0023761
HIT000540316 (
ENST00000442382
)
(Hypothetical protein.)
genome : 234,805,269 - 234,831,900 (26,632)
query : 1 - 3,564 (3,564/3,564)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 5.83333, cyto 5.5, nucl 4,
cyto_pero 3.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023761)
HIX0020654
HIT000551502 (
ENST00000453568
)
(Hypothetical short protein.)
genome : 234,809,842 - 234,818,922 (9,081)
query : 1 - 631 (631/631)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 12, extr 10, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020654)
HIX0023767
HIT000047829
(
AK127956
)
Representative transcript
(Conserved hypothetical protein.)
genome : 234,845,005 - 234,851,761 (6,757)
query : 1 - 2,535 (2,535/2,864)
3 exons
identity = 0.996
5'(1.000;0.997;0.996)3'
coverage = 0.902
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023767)
HIX0023767
HIT000520348 (
ENST00000422414
)
(Hypothetical short protein.)
genome : 234,845,135 - 234,855,723 (10,589)
query : 1 - 1,008 (1,008/1,008)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 8.5, cyto_nucl 7.83333,
cyto_pero 5.16667, mito_nucl 5.16667, nucl 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023767)
HIX0023709
HIT000660426 (
NR_038856
)
(Hypothetical protein.)
genome : 234,859,789 - 234,867,390 (7,602)
query : 1 - 3,793 (3,793/3,793)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023709)
HIX0023709
HIT000045230
(
AK125357
)
Representative transcript
(Hypothetical protein.)
genome : 234,861,148 - 234,867,390 (6,243)
query : 1 - 3,575 (3,575/3,575)
2 exons
identity = 0.998
5'(0.996;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 7, mito 5, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023709)
HIX0023709
HIT000535535 (
ENST00000437601
)
(Hypothetical protein.)
genome : 234,861,148 - 234,867,390 (6,243)
query : 1 - 3,574 (3,574/3,574)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023709)
HIX0028574
HIT000073310
(
AF193050
)
Representative transcript
(Conserved hypothetical protein.)
genome : 234,893,367 - 234,895,803 (2,437)
query : 1 - 2,438 (2,438/2,455)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 18, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028574)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000000109
Pan
sp. (Chimpanzee) : ENSPTRT00000003888
HIX0178258
HIT000521897 (
ENST00000423963
)
(Hypothetical protein.)
genome : 235,092,978 - 235,095,736 (2,759)
query : 1 - 423 (423/423)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 6, cyto 2, mito 2, golg 2, cyto_mito 2,
cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178258)
HIX0029176
HIT000089131
(
BC016972
)
Representative transcript
(Conserved hypothetical protein.)
genome : 235,093,091 - 235,099,746 (6,656)
query : 1 - 887 (887/981)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 9, cyto_nucl 5.66667, cyto 5.5,
cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029176)
HIX0029176
HIT000516491 (
ENST00000418557
)
(Hypothetical protein.)
genome : 235,093,089 - 235,099,746 (6,658)
query : 1 - 889 (889/889)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 9, cyto_nucl 5.66667, cyto 5.5,
cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029176)
HIX0029176
HIT000521922 (
ENST00000423988
)
(Hypothetical short protein.)
genome : 235,095,408 - 235,099,574 (4,167)
query : 1 - 317 (317/317)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 4, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029176)
HIX0029176
HIT000521109 (
ENST00000423175
)
(Hypothetical short protein.)
genome : 235,095,410 - 235,098,935 (3,526)
query : 1 - 554 (554/554)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 4, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029176)
HIX0178258
HIT000549700 (
ENST00000451766
)
(Non-protein coding transcript.)
genome : 235,095,413 - 235,105,809 (10,397)
query : 1 - 426 (426/426)
3 exons
identity = 0.993
5'(1.000;0.972;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178258)
HIX0029176
HIT000555978 (
ENST00000458044
)
(Hypothetical short protein.)
genome : 235,097,123 - 235,098,873 (1,751)
query : 1 - 359 (359/359)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029176)
HIX0214247
HIT000663575 (
ENST00000549744
)
(Hypothetical short protein.)
genome : 235,115,394 - 235,116,551 (1,158)
query : 1 - 846 (846/846)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 3.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214247)
HIX0200156
HIT000524626 (
ENST00000426692
)
(Non-protein coding transcript.)
genome : 235,260,502 - 235,260,727 (226)
query : 1 - 226 (226/226)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200156)
HIX0001710
HIT000018414
(
AK093547
)
Representative transcript
(Conserved hypothetical protein.)
genome : 235,270,014 - 235,271,890 (1,877)
query : 1 - 1,881 (1,881/1,881)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 8, cyto_nucl 5.66667, nucl 4.5,
cyto 3.5, cyto_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001710)
HIX0001711
HIT000205068 (
NM_014765
)
(Mitochondrial import receptor subunit TOM20 homolog; Mitochondrial 20 kDa outer membrane protein; Outer mitochondrial membrane receptor Tom20;)
genome : 235,272,659 - 235,292,256 (19,598)
query : 1 - 3,384 (3,384/3,407)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 6, plas 4, E.R. 3, pero 1.5,
cyto_pero 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001711)
HIX0001711
HIT000034644
(
BC009886
)
(Conserved hypothetical protein.)
genome : 235,272,659 - 235,274,278 (1,620)
query : 1 - 1,620 (1,620/1,643)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10, extr 7, nucl 6.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001711)
HIX0001711
HIT000347887 (
ENST00000366607
)
(Mitochondrial import receptor subunit TOM20 homolog; Mitochondrial 20 kDa outer membrane protein; Outer mitochondrial membrane receptor Tom20;)
genome : 235,272,651 - 235,292,251 (19,601)
query : 1 - 3,387 (3,387/3,387)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 6, plas 4, E.R. 3, pero 1.5,
cyto_pero 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001711)
HIX0001711
HIT000042150
(
D13641
)
Representative transcript
(Mitochondrial import receptor subunit TOM20 homolog; Mitochondrial 20 kDa outer membrane protein; Outer mitochondrial membrane receptor Tom20;)
genome : 235,272,660 - 235,292,131 (19,472)
query : 1 - 3,259 (3,259/3,259)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002056 : Protein import receptor MAS20
IPR022422 : Protein import receptor MAS20, metazoan
IPR023392 : Mitochondrial outer membrane translocase complex, subunit Tom20 domain
GO :
0005742 : Cellular Component : mitochondrial outer membrane translocase complex
0006605 : Biological Process : protein targeting
0006886 : Biological Process : intracellular protein transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 6, plas 4, E.R. 3, pero 1.5,
cyto_pero 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001711)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK160168
Danio
sp. (Zebrafish) : BC076116
Bos
sp. (Cow) : BC146178
Gallus
sp. (Chicken) : BX930714
Tetraodon
sp. (Tetraodon) : CR691934
Pongo
sp. (Orangutan) : CR859192
Monodelphis
sp. (Opossum) : ENSMODT00000010716
Oryzias
sp. (Medaka) : ENSORLT00000001496
Takifugu
sp. (Fugu) : SINFRUT00000176590
Rattus
sp. (Rat) : U21871
Macaca
sp. (Macaque) : XM_001102478
Equus
sp. (Horse) : XM_001491637
Pan
sp. (Chimpanzee) : XM_514283
Canis
sp. (Dog) : XM_844348
HIX0001711
HIT000336176
(
BC100286
)
(Mitochondrial import receptor subunit TOM20 homolog; Mitochondrial 20 kDa outer membrane protein; Outer mitochondrial membrane receptor Tom20;)
genome : 235,274,361 - 235,292,138 (17,778)
query : 1 - 1,564 (1,564/1,579)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002056 : Protein import receptor MAS20
IPR022422 : Protein import receptor MAS20, metazoan
IPR023392 : Mitochondrial outer membrane translocase complex, subunit Tom20 domain
GO :
0005742 : Cellular Component : mitochondrial outer membrane translocase complex
0006605 : Biological Process : protein targeting
0006886 : Biological Process : intracellular protein transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 6, plas 4, E.R. 3, pero 1.5,
cyto_pero 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001711)
HIX0001711
HIT000029975
(
BC000882
)
(Mitochondrial import receptor subunit TOM20 homolog; Mitochondrial 20 kDa outer membrane protein; Outer mitochondrial membrane receptor Tom20;)
genome : 235,274,906 - 235,292,148 (17,243)
query : 1 - 1,029 (1,029/1,048)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR002056 : Protein import receptor MAS20
IPR022422 : Protein import receptor MAS20, metazoan
IPR023392 : Mitochondrial outer membrane translocase complex, subunit Tom20 domain
GO :
0005742 : Cellular Component : mitochondrial outer membrane translocase complex
0006605 : Biological Process : protein targeting
0006886 : Biological Process : intracellular protein transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 6, plas 4, E.R. 3, pero 1.5,
cyto_pero 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001711)
HIX0001711
HIT000422607
(
AK289810
)
(Mitochondrial import receptor subunit TOM20 homolog; Mitochondrial 20 kDa outer membrane protein; Outer mitochondrial membrane receptor Tom20;)
genome : 235,274,994 - 235,292,256 (17,263)
query : 1 - 1,049 (1,049/1,049)
5 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002056 : Protein import receptor MAS20
IPR022422 : Protein import receptor MAS20, metazoan
IPR023392 : Mitochondrial outer membrane translocase complex, subunit Tom20 domain
GO :
0005742 : Cellular Component : mitochondrial outer membrane translocase complex
0006605 : Biological Process : protein targeting
0006886 : Biological Process : intracellular protein transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 6, plas 4, E.R. 3, pero 1.5,
cyto_pero 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001711)
HIX0001711
HIT000264800
(
BC071994
)
(Mitochondrial import receptor subunit TOM20 homolog; Mitochondrial 20 kDa outer membrane protein; Outer mitochondrial membrane receptor Tom20;)
genome : 235,275,039 - 235,292,127 (17,089)
query : 1 - 875 (875/893)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002056 : Protein import receptor MAS20
IPR022422 : Protein import receptor MAS20, metazoan
IPR023392 : Mitochondrial outer membrane translocase complex, subunit Tom20 domain
GO :
0005742 : Cellular Component : mitochondrial outer membrane translocase complex
0006605 : Biological Process : protein targeting
0006886 : Biological Process : intracellular protein transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 6, plas 4, E.R. 3, pero 1.5,
cyto_pero 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001711)
HIX0001711
HIT000262226
(
BC066335
)
(Mitochondrial import receptor subunit TOM20 homolog; Mitochondrial 20 kDa outer membrane protein; Outer mitochondrial membrane receptor Tom20;)
genome : 235,275,039 - 235,292,144 (17,106)
query : 1 - 892 (892/907)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002056 : Protein import receptor MAS20
IPR022422 : Protein import receptor MAS20, metazoan
IPR023392 : Mitochondrial outer membrane translocase complex, subunit Tom20 domain
GO :
0005742 : Cellular Component : mitochondrial outer membrane translocase complex
0006605 : Biological Process : protein targeting
0006886 : Biological Process : intracellular protein transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 6, plas 4, E.R. 3, pero 1.5,
cyto_pero 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001711)
HIX0001711
HIT000338940
(
BC107851
)
(Mitochondrial import receptor subunit TOM20 homolog; Mitochondrial 20 kDa outer membrane protein; Outer mitochondrial membrane receptor Tom20;)
genome : 235,275,147 - 235,292,134 (16,988)
query : 1 - 774 (774/795)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002056 : Protein import receptor MAS20
IPR022422 : Protein import receptor MAS20, metazoan
IPR023392 : Mitochondrial outer membrane translocase complex, subunit Tom20 domain
GO :
0005742 : Cellular Component : mitochondrial outer membrane translocase complex
0006605 : Biological Process : protein targeting
0006886 : Biological Process : intracellular protein transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 6, plas 4, E.R. 3, pero 1.5,
cyto_pero 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001711)
HIX0001711
HIT000572367 (
ENST00000467767
)
(Mitochondrial import receptor subunit TOM20 homolog.)
genome : 235,275,340 - 235,283,214 (7,875)
query : 1 - 377 (377/377)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 13.5, cyto 12.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001711)
HIX0001711
HIT000267568
(
CR456718
)
(Mitochondrial import receptor subunit TOM20 homolog; Mitochondrial 20 kDa outer membrane protein; Outer mitochondrial membrane receptor Tom20;)
genome : 235,275,383 - 235,292,030 (16,648)
query : 1 - 434 (434/438)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.991
InterPro :
IPR002056 : Protein import receptor MAS20
IPR022422 : Protein import receptor MAS20, metazoan
IPR023392 : Mitochondrial outer membrane translocase complex, subunit Tom20 domain
GO :
0005742 : Cellular Component : mitochondrial outer membrane translocase complex
0006605 : Biological Process : protein targeting
0006886 : Biological Process : intracellular protein transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 6, plas 4, E.R. 3, pero 1.5,
cyto_pero 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001711)
HIX0001711
HIT000525795_02 (
ENST00000427861
)
(Mitochondrial import receptor subunit TOM20 homolog.)
genome : 235,275,382 - 235,292,030 (16,649)
query : 1 - 435 (435/435)
5 exons
identity = 0.968
3'(0.952;0.986;0.988;1.000;0.926)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10.6667, cyto_plas 8.16667,
extr 6, mito 6, nucl 3.5, mito_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001711)
HIX0001711
HIT000633574_01 (
ENST00000534518
)
(Mitochondrial import receptor subunit TOM20 homolog.)
genome : 235,275,385 - 235,292,027 (16,643)
query : 3 - 427 (425/427)
5 exons
identity = 0.953
3'(0.974;0.971;0.963;0.957;0.915)5'
coverage = 0.995
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 19, extr 7, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001711)
HIX0001711
HIT000577474 (
ENST00000473132
)
(Mitochondrial import receptor subunit TOM20 homolog.)
genome : 235,277,083 - 235,285,774 (8,692)
query : 1 - 359 (359/365)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.984
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9.5, extr 9, cyto_mito 5.5, E.R. 4, plas 3,
golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001711)
HIX0077479
HIT000367231 (
NR_002956
)
(Non-protein coding transcript.)
genome : 235,291,118 - 235,291,252 (135)
query : 1 - 135 (135/135)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077479)
HIX0077479
HIT000383003
(
AJ609457
)
Representative transcript
(Non-protein coding transcript.)
genome : 235,291,118 - 235,291,252 (135)
query : 1 - 135 (135/135)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077479)
HIX0077479
HIT000470451 (
ENST00000384452
)
(Non-protein coding transcript.)
genome : 235,291,118 - 235,291,252 (135)
query : 1 - 135 (135/135)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077479)
HIX0028725
HIT000317174 (
NM_015014
)
(RNA-binding protein 34; RNA-binding motif protein 34;)
genome : 235,294,498 - 235,324,571 (30,074)
query : 1 - 1,853 (1,853/1,870)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028725)
HIX0028725
HIT000563624 (
NR_027762
)
(RNA-binding protein 34 isoform 1.)
genome : 235,294,498 - 235,324,571 (30,074)
query : 1 - 1,716 (1,716/1,733)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 9, extr 7, mito 5, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028725)
HIX0028725
HIT000506930 (
ENST00000408888
)
(RNA-binding protein 34; RNA-binding motif protein 34;)
genome : 235,294,498 - 235,324,772 (30,275)
query : 1 - 2,054 (2,054/2,054)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028725)
HIX0028725
HIT000347886 (
ENST00000366606
)
(RNA-binding protein 34; RNA-binding motif protein 34;)
genome : 235,294,499 - 235,324,571 (30,073)
query : 1 - 1,852 (1,852/1,852)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028725)
HIX0028725
HIT000425159
(
AK292362
)
(RNA-binding protein 34; RNA-binding motif protein 34;)
genome : 235,294,796 - 235,324,557 (29,762)
query : 1 - 1,541 (1,541/1,541)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028725)
HIX0028725
HIT000040763
(
BC029451
)
Representative transcript
(RNA-binding protein 34; RNA-binding motif protein 34;)
genome : 235,294,949 - 235,324,571 (29,623)
query : 1 - 1,402 (1,402/1,431)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028725)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK078099
Danio
sp. (Zebrafish) : BC075875
Rattus
sp. (Rat) : BC087155
Bos
sp. (Cow) : BC109866
Gallus
sp. (Chicken) : BX933892
Oryzias
sp. (Medaka) : ENSORLT00000001503
Takifugu
sp. (Fugu) : SINFRUT00000146475
Macaca
sp. (Macaque) : XM_001110827
Pan
sp. (Chimpanzee) : XM_001154355
Gallus
sp. (Chicken) : XM_001231591
Monodelphis
sp. (Opossum) : XM_001378573
Equus
sp. (Horse) : XM_001915071
Canis
sp. (Dog) : XM_536341
HIX0028725
HIT000598593 (
ENST00000495224
)
(RNA-binding protein 34 isoform 1.)
genome : 235,294,964 - 235,299,429 (4,466)
query : 1 - 549 (549/549)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028725)
HIX0028725
HIT000545735 (
ENST00000447801
)
(RNA-binding protein 34 isoform 2.)
genome : 235,294,982 - 235,324,535 (29,554)
query : 1 - 1,273 (1,273/1,273)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028725)
HIX0028725
HIT000578387 (
ENST00000474086
)
(RNA-binding protein 34 isoform 1.)
genome : 235,298,964 - 235,324,549 (25,586)
query : 1 - 882 (882/882)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028725)
HIX0023822
HIT000049708
(
AK130437
)
Representative transcript
(Conserved hypothetical protein.)
genome : 235,309,307 - 235,310,870 (1,564)
query : 1 - 1,564 (1,564/1,564)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 5, cyto_nucl 5, nucl 3.5, cyto 3.5,
mito_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023822)
HIX0028725
HIT000561983 (
NM_001161533
)
(RNA-binding protein 34 isoform 2.)
genome : 235,315,803 - 235,324,571 (8,769)
query : 1 - 905 (905/905)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028725)
HIX0028725
HIT000042225
(
D38491
)
(RNA-binding protein 34 isoform 2.)
genome : 235,315,803 - 235,324,547 (8,745)
query : 1 - 881 (881/881)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028725)
HIX0028725
HIT000580464 (
ENST00000476261
)
(RNA-binding protein 34 isoform 2.)
genome : 235,315,803 - 235,324,547 (8,745)
query : 1 - 881 (881/881)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028725)
HIX0028725
HIT000573302 (
ENST00000468751
)
(RNA-binding protein 34 isoform 2.)
genome : 235,318,196 - 235,324,486 (6,291)
query : 1 - 648 (648/648)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028725)
HIX0028725
HIT000527846 (
ENST00000429912
)
(RNA-binding protein 34 isoform 2.)
genome : 235,318,245 - 235,324,573 (6,329)
query : 1 - 667 (667/667)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028725)
HIX0028725
HIT000580177 (
ENST00000475960
)
(RNA-binding protein 34 isoform 2.)
genome : 235,318,403 - 235,324,277 (5,875)
query : 1 - 477 (477/477)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito_nucl 15.5, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028725)
HIX0028725
HIT000590489 (
ENST00000486751
)
(RNA-binding protein 34 isoform 2.)
genome : 235,323,465 - 235,324,598 (1,134)
query : 1 - 783 (783/783)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, mito_nucl 12, extr 8, mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028725)
HIX0028725
HIT000588843 (
ENST00000485019
)
(RNA-binding protein 34 isoform 2.)
genome : 235,323,510 - 235,324,531 (1,022)
query : 1 - 409 (409/409)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028725)
HIX0213715
HIT000074478
(
AF227899
)
Representative transcript
(AT-rich interactive domain-containing protein 4B family protein.)
genome : 235,330,218 - 235,383,706 (53,489)
query : 1 - 4,238 (4,238/4,254)
10 exons
identity = 0.995
3'(0.991;1.000;1.000;1.000;0.998;1.000;0.988;
0.996;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR016197 : Chromo domain-like
IPR025995 : RNA binding activity-knot of a chromodomain
IPR028853 : AT-rich interactive domain-containing protein 4B
GO :
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213715)
HIX0213715
HIT000006418
(
AK023144
)
(AT-rich interactive domain-containing protein 4B family protein.)
genome : 235,330,219 - 235,345,753 (15,535)
query : 1 - 3,081 (3,081/3,081)
5 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR028853 : AT-rich interactive domain-containing protein 4B
GO :
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 18.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213715)
HIX0213715
HIT000066566
(
AF083249
)
(AT-rich interactive domain-containing protein 4B family protein.)
genome : 235,330,927 - 235,377,288 (46,362)
query : 1 - 3,218 (3,218/3,218)
8 exons
identity = 0.994
3'(0.987;0.986;1.000;0.991;0.998;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR016197 : Chromo domain-like
IPR025995 : RNA binding activity-knot of a chromodomain
IPR028853 : AT-rich interactive domain-containing protein 4B
GO :
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213715)
HIX0213715
HIT000025061
(
AL133594
)
(AT-rich interactive domain-containing protein 4B family protein.)
genome : 235,331,064 - 235,338,714 (7,651)
query : 12 - 1,277 (1,266/1,286)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 0.991
InterPro :
IPR028853 : AT-rich interactive domain-containing protein 4B
GO :
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213715)
HIX0160034
HIT000311489 (
ENST00000357671
)
(Conserved hypothetical protein.)
genome : 235,333,435 - 235,334,206 (772)
query : 1 - 463 (463/463)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, mito 5, nucl 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160034)
HIX0213715
HIT000578695 (
ENST00000474401
)
(Conserved hypothetical protein.)
genome : 235,335,962 - 235,338,958 (2,997)
query : 1 - 578 (578/578)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213715)
HIX0213715
HIT000542554 (
ENST00000444620
)
(AT-rich interactive domain-containing protein 4B family protein.)
genome : 235,341,115 - 235,377,231 (36,117)
query : 1 - 1,647 (1,647/1,647)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213715)
HIX0213715
HIT000597939 (
ENST00000494543
)
(Conserved hypothetical protein.)
genome : 235,341,171 - 235,345,180 (4,010)
query : 1 - 453 (453/453)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 13.5, cyto 6.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213715)
HIX0214073
HIT000696977 (
ENST00000585119
)
(Non-protein coding transcript.)
genome : 235,353,349 - 235,353,431 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214073)
HIX0214073
HIT000725971 (
NR_039908
)
(Non-protein coding transcript.)
genome : 235,353,349 - 235,353,431 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214073)
HIX0213750
HIT000337782
(
BC104632
)
(AT-rich interactive domain-containing protein 4B; ARID domain-containing protein 4B; 180 kDa Sin3-associated polypeptide; Sin3-associated polypeptide p180; Breast cancer-associated antigen BRCAA1; Histone deacetylase complex subunit SAP180; Retinoblastoma-binding protein 1-like 1;)
genome : 235,383,757 - 235,424,069 (40,313)
query : 12 - 1,274 (1,263/1,305)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.990
InterPro :
IPR001606 : ARID DNA-binding domain
IPR002999 : Tudor domain
IPR012603 : RBB1NT
IPR028853 : AT-rich interactive domain-containing protein 4B
GO :
0003677 : Molecular Function : DNA binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213750)
HIX0213750
HIT000260450
(
BC062536
)
Representative transcript
(AT-rich interactive domain-containing protein 4B; ARID domain-containing protein 4B; 180 kDa Sin3-associated polypeptide; Sin3-associated polypeptide p180; Breast cancer-associated antigen BRCAA1; Histone deacetylase complex subunit SAP180; Retinoblastoma-binding protein 1-like 1;)
genome : 235,383,755 - 235,491,482 (107,728)
query : 1 - 1,717 (1,717/1,734)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001606 : ARID DNA-binding domain
IPR002999 : Tudor domain
IPR012603 : RBB1NT
IPR028853 : AT-rich interactive domain-containing protein 4B
GO :
0003677 : Molecular Function : DNA binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213750)
HIX0213750
HIT000014166
(
AK057552
)
(AT-rich interactive domain-containing protein 4B; ARID domain-containing protein 4B; 180 kDa Sin3-associated polypeptide; Sin3-associated polypeptide p180; Breast cancer-associated antigen BRCAA1; Histone deacetylase complex subunit SAP180; Retinoblastoma-binding protein 1-like 1;)
genome : 235,391,626 - 235,491,532 (99,907)
query : 1 - 2,315 (2,315/2,315)
11 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002999 : Tudor domain
IPR012603 : RBB1NT
IPR028853 : AT-rich interactive domain-containing protein 4B
GO :
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13.5, mito 7, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213750)
HIX0213750
HIT000571293 (
ENST00000466653
)
(AT-rich interactive domain-containing protein 4B family protein.)
genome : 235,391,626 - 235,491,532 (99,907)
query : 1 - 2,315 (2,315/2,315)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13.5, mito 7, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213750)
HIX0161401
HIT000550524 (
ENST00000452590
)
(Conserved hypothetical protein.)
genome : 235,459,180 - 235,459,650 (471)
query : 1 - 471 (471/471)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11.5, cyto_nucl 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161401)
HIX0180112
pHIT000072410 ( pHIT000072410 )
Representative transcript
(Hypothetical protein.)
genome : 235,489,999 - 235,490,538 (540)
query : 1 - 540 (540/540)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0180112)
CAGE tag :
H05BD26J2005
HIX0213750
HIT000567781 (
ENST00000462969
)
(Non-protein coding transcript.)
genome : 235,490,106 - 235,491,178 (1,073)
query : 1 - 273 (273/273)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213750)
HIX0001713
HIT000262736
(
BC067768
)
(Geranylgeranyl pyrophosphate synthase; GGPP synthase; GGPPSase; EC=2.5.1.-; (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; EC=2.5.1.1; Farnesyl diphosphate synthase; Farnesyltranstransferase; EC=2.5.1.29; Geranylgeranyl diphosphate synthase; Geranyltranstransferase; EC=2.5.1.10;)
genome : 235,490,665 - 235,506,408 (15,744)
query : 1 - 1,396 (1,396/1,411)
4 exons
identity = 0.999
5'(0.993;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.5.1.1
,
EC 2.5.1.10
,
EC 2.5.1.29
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000092 : Polyprenyl synthetase
IPR008949 : Isoprenoid synthase domain
IPR017446 : Polyprenyl synthetase-related
GO :
0008299 : Biological Process : isoprenoid biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16, cyto_plas 14.3333, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
HIX0001713
HIT000592234 (
ENST00000488594
)
(Geranylgeranyl pyrophosphate synthase; GGPP synthase; GGPPSase; EC=2.5.1.-; (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; EC=2.5.1.1; Farnesyl diphosphate synthase; Farnesyltranstransferase; EC=2.5.1.29; Geranylgeranyl diphosphate synthase; Geranyltranstransferase; EC=2.5.1.10;)
genome : 235,490,665 - 235,506,408 (15,744)
query : 1 - 1,396 (1,396/1,396)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.1
,
EC 2.5.1.10
,
EC 2.5.1.29
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16, cyto_plas 14.3333, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
HIX0001713
HIT000576220 (
ENST00000471812
)
(Geranylgeranyl pyrophosphate synthase; GGPP synthase; GGPPSase; EC=2.5.1.-; (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; EC=2.5.1.1; Farnesyl diphosphate synthase; Farnesyltranstransferase; EC=2.5.1.29; Geranylgeranyl diphosphate synthase; Geranyltranstransferase; EC=2.5.1.10;)
genome : 235,491,714 - 235,505,911 (14,198)
query : 1 - 850 (850/850)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.1
,
EC 2.5.1.10
,
EC 2.5.1.29
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14.5, cyto_plas 11.5, nucl 5,
cysk 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
HIX0001713
HIT000366291 (
NM_001037277
)
(Geranylgeranyl pyrophosphate synthase; GGPP synthase; GGPPSase; EC=2.5.1.-; (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; EC=2.5.1.1; Farnesyl diphosphate synthase; Farnesyltranstransferase; EC=2.5.1.29; Geranylgeranyl diphosphate synthase; Geranyltranstransferase; EC=2.5.1.10;)
genome : 235,491,753 - 235,507,843 (16,091)
query : 1 - 2,743 (2,743/2,757)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.1
,
EC 2.5.1.10
,
EC 2.5.1.29
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16, cyto_plas 14.3333, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
HIX0001713
HIT000312591 (
ENST00000358966
)
(Geranylgeranyl pyrophosphate synthase; GGPP synthase; GGPPSase; EC=2.5.1.-; (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; EC=2.5.1.1; Farnesyl diphosphate synthase; Farnesyltranstransferase; EC=2.5.1.29; Geranylgeranyl diphosphate synthase; Geranyltranstransferase; EC=2.5.1.10;)
genome : 235,491,753 - 235,507,840 (16,088)
query : 1 - 2,740 (2,740/2,740)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.1
,
EC 2.5.1.10
,
EC 2.5.1.29
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16, cyto_plas 14.3333, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
HIX0001713
HIT000659671 (
NR_036605
)
(Geranylgeranyl pyrophosphate synthase; GGPP synthase; GGPPSase; EC=2.5.1.-; (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; EC=2.5.1.1; Farnesyl diphosphate synthase; Farnesyltranstransferase; EC=2.5.1.29; Geranylgeranyl diphosphate synthase; Geranyltranstransferase; EC=2.5.1.10;)
genome : 235,491,869 - 235,507,843 (15,975)
query : 1 - 2,814 (2,814/2,828)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.1
,
EC 2.5.1.10
,
EC 2.5.1.29
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
HIX0001713
HIT000064764
(
AF057698
)
(Geranylgeranyl pyrophosphate synthase; GGPP synthase; GGPPSase; EC=2.5.1.-; (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; EC=2.5.1.1; Farnesyl diphosphate synthase; Farnesyltranstransferase; EC=2.5.1.29; Geranylgeranyl diphosphate synthase; Geranyltranstransferase; EC=2.5.1.10;)
genome : 235,491,879 - 235,506,412 (14,534)
query : 1 - 1,466 (1,466/1,466)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.1
,
EC 2.5.1.10
,
EC 2.5.1.29
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000092 : Polyprenyl synthetase
IPR008949 : Isoprenoid synthase domain
IPR017446 : Polyprenyl synthetase-related
GO :
0008299 : Biological Process : isoprenoid biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16, cyto_plas 14.3333, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
HIX0001713
HIT000112283 (
ENST00000282841
)
(Geranylgeranyl pyrophosphate synthase; GGPP synthase; GGPPSase; EC=2.5.1.-; (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; EC=2.5.1.1; Farnesyl diphosphate synthase; Farnesyltranstransferase; EC=2.5.1.29; Geranylgeranyl diphosphate synthase; Geranyltranstransferase; EC=2.5.1.10;)
genome : 235,491,885 - 235,507,847 (15,963)
query : 1 - 2,895 (2,895/2,895)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.1
,
EC 2.5.1.10
,
EC 2.5.1.29
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16, cyto_plas 14.3333, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
HIX0001713
HIT000008413
(
AK025139
)
Representative transcript
(Geranylgeranyl pyrophosphate synthase; GGPP synthase; GGPPSase; EC=2.5.1.-; (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; EC=2.5.1.1; Farnesyl diphosphate synthase; Farnesyltranstransferase; EC=2.5.1.29; Geranylgeranyl diphosphate synthase; Geranyltranstransferase; EC=2.5.1.10;)
genome : 235,491,885 - 235,507,467 (15,583)
query : 1 - 2,517 (2,517/2,534)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.5.1.1
,
EC 2.5.1.10
,
EC 2.5.1.29
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000092 : Polyprenyl synthetase
IPR008949 : Isoprenoid synthase domain
IPR017446 : Polyprenyl synthetase-related
GO :
0008299 : Biological Process : isoprenoid biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16, cyto_plas 14.3333, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB118243
Mus
sp. (Mouse) : AK011980
Bos
sp. (Cow) : BC120313
Oryzias
sp. (Medaka) : ENSORLT00000015676
Pongo
sp. (Orangutan) : ENSPPYT00000000105
Tetraodon
sp. (Tetraodon) : GSTENT00030869001
Takifugu
sp. (Fugu) : SINFRUT00000132848
Macaca
sp. (Macaque) : XM_001100733
Pan
sp. (Chimpanzee) : XM_001154821
Monodelphis
sp. (Opossum) : XM_001368851
Equus
sp. (Horse) : XM_001492832
Gallus
sp. (Chicken) : XM_424685
Canis
sp. (Dog) : XM_536340
HIX0001713
HIT000032322
(
BC005252
)
(Geranylgeranyl pyrophosphate synthase; GGPP synthase; GGPPSase; EC=2.5.1.-; (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; EC=2.5.1.1; Farnesyl diphosphate synthase; Farnesyltranstransferase; EC=2.5.1.29; Geranylgeranyl diphosphate synthase; Geranyltranstransferase; EC=2.5.1.10;)
genome : 235,491,885 - 235,506,410 (14,526)
query : 1 - 1,458 (1,458/1,489)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 2.5.1.1
,
EC 2.5.1.10
,
EC 2.5.1.29
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000092 : Polyprenyl synthetase
IPR008949 : Isoprenoid synthase domain
IPR017446 : Polyprenyl synthetase-related
GO :
0008299 : Biological Process : isoprenoid biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16, cyto_plas 14.3333, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
HIX0001713
HIT000475353 (
ENST00000391855
)
(Geranylgeranyl pyrophosphate synthase; GGPP synthase; GGPPSase; EC=2.5.1.-; (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; EC=2.5.1.1; Farnesyl diphosphate synthase; Farnesyltranstransferase; EC=2.5.1.29; Geranylgeranyl diphosphate synthase; Geranyltranstransferase; EC=2.5.1.10;)
genome : 235,491,886 - 235,506,453 (14,568)
query : 1 - 1,407 (1,407/1,407)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.1
,
EC 2.5.1.10
,
EC 2.5.1.29
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
HIX0001713
HIT000487902
(
AK293278
)
(Geranylgeranyl pyrophosphate synthase; GGPP synthase; GGPPSase; EC=2.5.1.-; (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; EC=2.5.1.1; Farnesyl diphosphate synthase; Farnesyltranstransferase; EC=2.5.1.29; Geranylgeranyl diphosphate synthase; Geranyltranstransferase; EC=2.5.1.10;)
genome : 235,491,886 - 235,506,453 (14,568)
query : 1 - 1,407 (1,407/1,407)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.1
,
EC 2.5.1.10
,
EC 2.5.1.29
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000092 : Polyprenyl synthetase
IPR008949 : Isoprenoid synthase domain
IPR017446 : Polyprenyl synthetase-related
GO :
0008299 : Biological Process : isoprenoid biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
HIX0001713
HIT000585964 (
ENST00000482013
)
(Hypothetical short protein.)
genome : 235,491,888 - 235,493,299 (1,412)
query : 1 - 470 (470/470)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 11.5, cyto_nucl 9.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
HIX0001713
HIT000593287 (
ENST00000489692
)
(Hypothetical short protein.)
genome : 235,491,905 - 235,492,744 (840)
query : 1 - 506 (506/506)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 5.5, cyto_nucl 4.83333, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
HIX0001713
HIT000058575
(
AB019036
)
(Geranylgeranyl pyrophosphate synthase; GGPP synthase; GGPPSase; EC=2.5.1.-; (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; EC=2.5.1.1; Farnesyl diphosphate synthase; Farnesyltranstransferase; EC=2.5.1.29; Geranylgeranyl diphosphate synthase; Geranyltranstransferase; EC=2.5.1.10;)
genome : 235,491,907 - 235,506,410 (14,504)
query : 1 - 1,437 (1,437/1,437)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.5.1.1
,
EC 2.5.1.10
,
EC 2.5.1.29
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000092 : Polyprenyl synthetase
IPR008949 : Isoprenoid synthase domain
IPR017446 : Polyprenyl synthetase-related
GO :
0008299 : Biological Process : isoprenoid biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16, cyto_plas 14.3333, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
HIX0001713
HIT000058457
(
AB016043
)
(Geranylgeranyl pyrophosphate synthase; GGPP synthase; GGPPSase; EC=2.5.1.-; (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; EC=2.5.1.1; Farnesyl diphosphate synthase; Farnesyltranstransferase; EC=2.5.1.29; Geranylgeranyl diphosphate synthase; Geranyltranstransferase; EC=2.5.1.10;)
genome : 235,491,948 - 235,506,410 (14,463)
query : 1 - 1,395 (1,395/1,395)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.1
,
EC 2.5.1.10
,
EC 2.5.1.29
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000092 : Polyprenyl synthetase
IPR008949 : Isoprenoid synthase domain
IPR017446 : Polyprenyl synthetase-related
GO :
0008299 : Biological Process : isoprenoid biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16, cyto_plas 14.3333, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
HIX0001713
HIT000001941
(
AF125394
)
(Geranylgeranyl pyrophosphate synthase; GGPP synthase; GGPPSase; EC=2.5.1.-; (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; EC=2.5.1.1; Farnesyl diphosphate synthase; Farnesyltranstransferase; EC=2.5.1.29; Geranylgeranyl diphosphate synthase; Geranyltranstransferase; EC=2.5.1.10;)
genome : 235,491,972 - 235,506,411 (14,440)
query : 2 - 1,374 (1,373/1,387)
4 exons
identity = 0.999
5'(0.992;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 2.5.1.1
,
EC 2.5.1.10
,
EC 2.5.1.29
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16, cyto_plas 14.3333, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
HIX0001713
HIT000428697
(
AK309831
)
(Conserved hypothetical protein.)
genome : 235,492,241 - 235,493,335 (1,095)
query : 1 - 1,095 (1,095/1,095)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 5.5, cyto_nucl 4.83333, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
HIX0001713
HIT000580332 (
ENST00000476121
)
(Geranylgeranyl pyrophosphate synthase; GGPP synthase; GGPPSase; EC=2.5.1.-; (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; EC=2.5.1.1; Farnesyl diphosphate synthase; Farnesyltranstransferase; EC=2.5.1.29; Geranylgeranyl diphosphate synthase; Geranyltranstransferase; EC=2.5.1.10;)
genome : 235,492,331 - 235,506,380 (14,050)
query : 1 - 2,703 (2,703/2,703)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.1
,
EC 2.5.1.10
,
EC 2.5.1.29
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16, cyto_plas 14.3333, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
HIX0001713
HIT000600606 (
ENST00000497327
)
(Geranylgeranyl pyrophosphate synthase; GGPP synthase; GGPPSase; EC=2.5.1.-; (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; EC=2.5.1.1; Farnesyl diphosphate synthase; Farnesyltranstransferase; EC=2.5.1.29; Geranylgeranyl diphosphate synthase; Geranyltranstransferase; EC=2.5.1.10;)
genome : 235,492,344 - 235,505,874 (13,531)
query : 1 - 868 (868/868)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.1
,
EC 2.5.1.10
,
EC 2.5.1.29
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, cyto_plas 13.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
HIX0001714
HIT000005696
(
AK022422
)
Representative transcript
(Conserved hypothetical protein.)
genome : 235,494,503 - 235,496,382 (1,880)
query : 1 - 1,879 (1,879/1,879)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, lyso 2, nucl 1.5, cyto_nucl 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001714)
HIX0001713
HIT000058541
(
AB017971
)
(Geranylgeranyl pyrophosphate synthase; GGPP synthase; GGPPSase; EC=2.5.1.-; (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; EC=2.5.1.1; Farnesyl diphosphate synthase; Farnesyltranstransferase; EC=2.5.1.29; Geranylgeranyl diphosphate synthase; Geranyltranstransferase; EC=2.5.1.10;)
genome : 235,498,580 - 235,506,087 (7,508)
query : 1 - 903 (903/903)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.1
,
EC 2.5.1.10
,
EC 2.5.1.29
KEGG pathway :
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000092 : Polyprenyl synthetase
IPR008949 : Isoprenoid synthase domain
IPR017446 : Polyprenyl synthetase-related
GO :
0008299 : Biological Process : isoprenoid biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16, cyto_plas 14.3333, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001713)
HIX0159994
HIT000106672 (
ENST00000254724
)
(Conserved hypothetical protein.)
genome : 235,500,121 - 235,500,402 (282)
query : 1 - 282 (282/282)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 5, mito 5, cyto_mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159994)
HIX0029169
HIT000088595
(
BC015196
)
Representative transcript
(Conserved hypothetical protein.)
genome : 235,509,686 - 235,510,457 (772)
query : 1 - 772 (772/800)
1 exon
identity = 0.988
5'(0.988)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029169)
HIX0029326
HIT000096987
(
BC041948
)
Representative transcript
(Conserved hypothetical protein.)
genome : 235,519,622 - 235,521,651 (2,030)
query : 1 - 2,030 (2,030/2,045)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, extr 9, cyto_nucl 9, mito 4, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029326)
HIX0160502
HIT000519818 (
ENST00000421884
)
(Conserved hypothetical protein.)
genome : 235,524,468 - 235,525,855 (1,388)
query : 1 - 1,388 (1,388/1,388)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160502)
HIX0199899
HIT000347881 (
ENST00000366601
)
(CAP Gly-rich domain containing protein.)
genome : 235,530,675 - 235,612,283 (81,609)
query : 1 - 1,966 (1,966/1,966)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 10, cyto_plas 10, cyto_golg 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199899)
HIX0199899
HIT000220681
(
U61232
)
Representative transcript
(Tubulin-specific chaperone E; Tubulin-folding cofactor E;)
genome : 235,530,771 - 235,612,280 (81,510)
query : 50 - 1,916 (1,867/1,931)
17 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997)3'
coverage = 0.973
InterPro :
IPR000626 : Ubiquitin-like
IPR000938 : CAP Gly-rich domain
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 10, cyto_plas 10, cyto_golg 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199899)
HIX0199899
HIT000200051 (
NM_003193
)
(CAP Gly-rich domain containing protein.)
genome : 235,530,728 - 235,612,280 (81,553)
query : 1 - 1,910 (1,910/1,925)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 10, cyto_plas 10, cyto_golg 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199899)
HIX0199899
HIT000397880 (
NM_001079515
)
(CAP Gly-rich domain containing protein.)
genome : 235,530,728 - 235,612,280 (81,553)
query : 1 - 1,958 (1,958/1,973)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 10, cyto_plas 10, cyto_golg 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199899)
HIX0199899
HIT000505506 (
ENST00000406207
)
(CAP Gly-rich domain containing protein.)
genome : 235,530,728 - 235,612,278 (81,551)
query : 1 - 1,956 (1,956/1,956)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 10, cyto_plas 10, cyto_golg 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199899)
HIX0199899
HIT000586175 (
ENST00000482230
)
(Leucine-rich repeat containing protein.)
genome : 235,530,740 - 235,599,157 (68,418)
query : 1 - 1,050 (1,050/1,050)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 6, mito 5.5, E.R._mito 3.5, cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199899)
HIX0199899
HIT000490809
(
AK296185
)
(Tubulin-specific chaperone E; Tubulin-folding cofactor E;)
genome : 235,530,745 - 235,612,214 (81,470)
query : 1 - 1,980 (1,980/1,980)
18 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.921;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000626 : Ubiquitin-like
IPR000938 : CAP Gly-rich domain
IPR001931 : Ribosomal protein S21e
IPR029071 : Ubiquitin-related domain
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14.5, nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199899)
HIX0199899
HIT000642707 (
ENST00000543662
)
(Ribosomal protein S21e family protein.)
genome : 235,530,745 - 235,612,214 (81,470)
query : 1 - 1,980 (1,980/1,980)
18 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.921;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14.5, nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199899)
HIX0199899
HIT000492674
(
AK298050
)
(CAP Gly-rich domain containing protein.)
genome : 235,530,746 - 235,600,761 (70,016)
query : 2 - 1,476 (1,475/1,476)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR000938 : CAP Gly-rich domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.6667, cyto 15, cyto_plas 9.66667, nucl 8,
mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199899)
HIX0199899
HIT000018264
(
AK093397
)
(Tubulin-specific chaperone E; Tubulin-folding cofactor E;)
genome : 235,530,770 - 235,612,281 (81,512)
query : 1 - 1,840 (1,840/1,840)
16 exons
identity = 0.998
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000626 : Ubiquitin-like
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 11.5, cyto_pero 8.83333, nucl 8.5,
mito 6, E.R._mito 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199899)
HIX0199899
HIT000576410 (
ENST00000472011
)
(Ubiquitin-like domain containing protein.)
genome : 235,530,770 - 235,612,281 (81,512)
query : 1 - 1,840 (1,840/1,840)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 11.5, cyto_pero 8.83333, nucl 8.5,
mito 6, E.R._mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199899)
HIX0199899
HIT000425084
(
AK292287
)
(Tubulin-specific chaperone E; Tubulin-folding cofactor E;)
genome : 235,530,770 - 235,612,278 (81,509)
query : 1 - 1,866 (1,866/1,866)
17 exons
identity = 0.999
5'(1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.983;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000626 : Ubiquitin-like
IPR000938 : CAP Gly-rich domain
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199899)
HIX0199899
HIT000033878
(
BC008654
)
(Tubulin-specific chaperone E; Tubulin-folding cofactor E;)
genome : 235,530,783 - 235,612,280 (81,498)
query : 1 - 1,855 (1,855/1,870)
17 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997)3'
coverage = 0.999
InterPro :
IPR000626 : Ubiquitin-like
IPR000938 : CAP Gly-rich domain
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 10, cyto_plas 10, cyto_golg 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199899)
HIX0199899
HIT000100006
(
BT007086
)
(CAP Gly-rich domain containing protein.)
genome : 235,543,365 - 235,612,075 (68,711)
query : 1 - 1,582 (1,582/1,584)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
InterPro :
IPR000626 : Ubiquitin-like
IPR000938 : CAP Gly-rich domain
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 10, cyto_plas 10, cyto_golg 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199899)
HIX0199899
HIT000566525 (
ENST00000461651
)
(Conserved hypothetical protein.)
genome : 235,581,783 - 235,596,381 (14,599)
query : 1 - 567 (567/567)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 9, cyto 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199899)
HIX0203714
HIT000528547 (
ENST00000430613
)
(Hypothetical short protein.)
genome : 235,582,830 - 235,590,298 (7,469)
query : 1 - 337 (337/337)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203714)
HIX0199899
HIT000532413 (
ENST00000434479
)
(Ribosomal protein S21e family protein.)
genome : 235,596,300 - 235,596,546 (247)
query : 1 - 247 (247/247)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199899)
HIX0199899
HIT000570159 (
ENST00000465463
)
(Ubiquitin-related domain containing protein.)
genome : 235,605,019 - 235,611,887 (6,869)
query : 1 - 463 (463/463)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199899)
HIX0001716
HIT000213757 (
NM_152490
)
(UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2; Beta-1,3-GalNAc-T2; EC=2.4.1.-; Beta-1,3-N-acetylgalactosaminyltransferase II;)
genome : 235,610,505 - 235,667,781 (57,277)
query : 1 - 4,748 (4,748/4,755)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 2.4.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, plas 8, lyso 5, golg 3, mito 2.5, pero 2,
cyto_mito 2, E.R._golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001716)
HIX0001716
HIT000328981
(
AB209046
)
(UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2; Beta-1,3-GalNAc-T2; EC=2.4.1.-; Beta-1,3-N-acetylgalactosaminyltransferase II;)
genome : 235,610,533 - 235,658,033 (47,501)
query : 1 - 4,273 (4,273/4,273)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.990;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.-
InterPro :
IPR002659 : Glycosyl transferase, family 31
GO :
0006486 : Biological Process : protein glycosylation
0008378 : Molecular Function : galactosyltransferase activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 28.5, cyto_mito 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001716)
HIX0001716
HIT000040825
(
BC029564
)
Representative transcript
(UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2; Beta-1,3-GalNAc-T2; EC=2.4.1.-; Beta-1,3-N-acetylgalactosaminyltransferase II;)
genome : 235,613,246 - 235,667,781 (54,536)
query : 1 - 2,007 (2,007/2,022)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.-
InterPro :
IPR002659 : Glycosyl transferase, family 31
GO :
0006486 : Biological Process : protein glycosylation
0008378 : Molecular Function : galactosyltransferase activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, plas 8, lyso 5, golg 3, mito 2.5, pero 2,
cyto_mito 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001716)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK151677
Bos
sp. (Cow) : BC151379
Gallus
sp. (Chicken) : CR388703
Canis
sp. (Dog) : ENSCAFT00000017927
Danio
sp. (Zebrafish) : ENSDART00000099417
Monodelphis
sp. (Opossum) : ENSMODT00000036464
Oryzias
sp. (Medaka) : ENSORLT00000015695
Pongo
sp. (Orangutan) : ENSPPYT00000000103
Rattus
sp. (Rat) : ENSRNOT00000022924
Tetraodon
sp. (Tetraodon) : GSTENT00030871001
Takifugu
sp. (Fugu) : SINFRUT00000181963
Macaca
sp. (Macaque) : XM_001101191
Equus
sp. (Horse) : XM_001491545
Pan
sp. (Chimpanzee) : XM_525099
HIX0001716
HIT000347880 (
ENST00000366600
)
(UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2; Beta-1,3-GalNAc-T2; EC=2.4.1.-; Beta-1,3-N-acetylgalactosaminyltransferase II;)
genome : 235,613,238 - 235,667,781 (54,544)
query : 1 - 2,015 (2,015/2,015)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, plas 8, lyso 5, golg 3, mito 2.5, pero 2,
cyto_mito 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001716)
HIX0001716
HIT000430492
(
AK311626
)
(UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2; Beta-1,3-GalNAc-T2; EC=2.4.1.-; Beta-1,3-N-acetylgalactosaminyltransferase II;)
genome : 235,613,583 - 235,634,469 (20,887)
query : 1 - 942 (942/942)
7 exons
identity = 0.998
3'(1.000;1.000;1.000;0.992;1.000;1.000;0.997)5'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cysk 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001716)
HIX0001716
HIT000581829 (
ENST00000477694
)
(UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2; Beta-1,3-GalNAc-T2; EC=2.4.1.-; Beta-1,3-N-acetylgalactosaminyltransferase II;)
genome : 235,617,524 - 235,629,116 (11,593)
query : 1 - 578 (578/578)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13.5, cysk 9, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001716)
HIX0001716
HIT000567214 (
ENST00000462374
)
(UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2; Beta-1,3-GalNAc-T2; EC=2.4.1.-; Beta-1,3-N-acetylgalactosaminyltransferase II;)
genome : 235,617,599 - 235,634,244 (16,646)
query : 1 - 315 (315/315)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 11, nucl 7, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001716)
HIX0203504
HIT000440910_17
(
DQ574379
)
Representative transcript
(Non-protein coding transcript.)
genome : 235,623,185 - 235,623,215 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203504)
HIX0001716
HIT000016364
(
AK091497
)
(UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2; Beta-1,3-GalNAc-T2; EC=2.4.1.-; Beta-1,3-N-acetylgalactosaminyltransferase II;)
genome : 235,626,771 - 235,667,554 (40,784)
query : 1 - 2,864 (2,864/2,864)
7 exons
identity = 0.997
3'(0.996;0.997;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cysk 15, cyto_nucl 9, cyto 8, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001716)
HIX0001716
HIT000582314 (
ENST00000478199
)
(UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2; Beta-1,3-GalNAc-T2; EC=2.4.1.-; Beta-1,3-N-acetylgalactosaminyltransferase II;)
genome : 235,626,772 - 235,667,725 (40,954)
query : 1 - 3,034 (3,034/3,034)
7 exons
identity = 1.000
3'(1.000;0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cysk 15, cyto_nucl 9, cyto 8, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001716)
HIX0001716
HIT000725381 (
NM_001277155
)
(UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform 2 precursor.)
genome : 235,628,214 - 235,667,781 (39,568)
query : 1 - 1,932 (1,932/1,946)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12.5, mito 10, extr_plas 9, plas 4.5, lyso 2,
golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001716)
HIX0001716
HIT000089133
(
BC016974
)
(UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform 2 precursor.)
genome : 235,628,214 - 235,667,722 (39,509)
query : 1 - 1,873 (1,873/1,887)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.-
InterPro :
IPR002659 : Glycosyl transferase, family 31
GO :
0006486 : Biological Process : protein glycosylation
0008378 : Molecular Function : galactosyltransferase activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12.5, mito 10, extr_plas 9, plas 4.5, lyso 2,
golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001716)
HIX0001716
HIT000119961 (
ENST00000313984
)
(UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform 2 precursor.)
genome : 235,628,213 - 235,667,722 (39,510)
query : 1 - 1,874 (1,874/1,874)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12.5, mito 10, extr_plas 9, plas 4.5, lyso 2,
golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001716)
HIX0001716
HIT000049568
(
AK130297
)
(UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2; Beta-1,3-GalNAc-T2; EC=2.4.1.-; Beta-1,3-N-acetylgalactosaminyltransferase II;)
genome : 235,642,224 - 235,667,725 (25,502)
query : 1 - 1,869 (1,869/1,869)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, cyto_nucl 12, cysk 10, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001716)
HIX0001716
HIT000597777 (
ENST00000494378
)
(UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2; Beta-1,3-GalNAc-T2; EC=2.4.1.-; Beta-1,3-N-acetylgalactosaminyltransferase II;)
genome : 235,642,224 - 235,667,725 (25,502)
query : 1 - 1,869 (1,869/1,869)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, cyto_nucl 12, cysk 10, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001716)
HIX0001716
HIT000566852 (
ENST00000461994
)
(UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2; Beta-1,3-GalNAc-T2; EC=2.4.1.-; Beta-1,3-N-acetylgalactosaminyltransferase II;)
genome : 235,643,420 - 235,647,986 (4,567)
query : 1 - 395 (395/395)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10.5, nucl 8.5, extr 5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001716)
HIX0161549
HIT000555405 (
ENST00000457471
)
(Hypothetical protein.)
genome : 235,683,269 - 235,683,983 (715)
query : 1 - 715 (715/715)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 10.5, mito_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161549)
HIX0160835
HIT000530978 (
ENST00000433044
)
(NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 family protein.)
genome : 235,700,820 - 235,701,341 (522)
query : 1 - 522 (522/522)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19, lyso 7, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160835)
HIX0160591
HIT000522806 (
ENST00000424872
)
(NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit domain containing protein.)
genome : 235,701,352 - 235,703,145 (1,794)
query : 1 - 1,794 (1,794/1,794)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160591)
HIX0161227
HIT000544133 (
ENST00000446199
)
(Hypothetical protein.)
genome : 235,703,353 - 235,704,715 (1,363)
query : 1 - 1,363 (1,363/1,363)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14.5, cyto 7.5, extr 5, mito 3,
extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161227)
HIX0161227
HIT000513237 (
ENST00000415303
)
(NADH-ubiquinone oxidoreductase chain 4L/K family protein.)
genome : 235,704,712 - 235,705,006 (295)
query : 1 - 295 (295/295)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161227)
HIX0160256
HIT000510843 (
ENST00000412909
)
(NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 family protein.)
genome : 235,705,059 - 235,705,397 (339)
query : 1 - 339 (339/339)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160256)
HIX0160623
HIT000523721 (
ENST00000425787
)
(Cytochrome c oxidase subunit III domain containing protein.)
genome : 235,705,459 - 235,705,690 (232)
query : 1 - 232 (232/232)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 13.5, nucl 11.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160623)
HIX0023555
HIT000027476
(
AL832564
)
(Conserved hypothetical protein.)
genome : 235,710,986 - 235,712,844 (1,859)
query : 1 - 1,857 (1,857/1,916)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023555)
HIX0023555
HIT000201231 (
NM_004485
)
(G-protein, gamma subunit family protein.)
genome : 235,710,986 - 235,814,054 (103,069)
query : 1 - 4,867 (4,867/4,885)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 7.5, cyto_nucl 6.5, cyto 4.5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023555)
HIX0023555
HIT000485280 (
NM_001098721
)
(G-protein, gamma subunit family protein.)
genome : 235,710,986 - 235,814,054 (103,069)
query : 1 - 4,979 (4,979/4,997)
4 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 7.5, cyto_nucl 6.5, cyto 4.5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023555)
HIX0023555
HIT000485281 (
NM_001098722
)
(G-protein, gamma subunit family protein.)
genome : 235,710,986 - 235,813,293 (102,308)
query : 1 - 5,105 (5,105/5,123)
4 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 7.5, cyto_nucl 6.5, cyto 4.5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023555)
HIX0023555
HIT000015163
(
AK074383
)
(Conserved hypothetical protein.)
genome : 235,710,986 - 235,712,998 (2,013)
query : 1 - 2,014 (2,014/2,032)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 5.5, nucl 5, cyto 4, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023555)
HIX0023555
HIT000548527 (
ENST00000450593
)
(G-protein, gamma subunit family protein.)
genome : 235,710,987 - 235,814,054 (103,068)
query : 1 - 4,978 (4,978/4,978)
4 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 7.5, cyto_nucl 6.5, cyto 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023555)
HIX0023555
HIT000475352 (
ENST00000391854
)
(G-protein, gamma subunit family protein.)
genome : 235,710,987 - 235,813,293 (102,307)
query : 1 - 5,104 (5,104/5,104)
4 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 7.5, cyto_nucl 6.5, cyto 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023555)
HIX0023555
HIT000039574
(
BC022485
)
(Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4; Precursor;)
genome : 235,714,132 - 235,814,054 (99,923)
query : 1 - 1,720 (1,720/1,734)
3 exons
identity = 0.997
3'(0.996;1.000)5'
coverage = 1.000
InterPro :
IPR001770 : G-protein, gamma subunit
IPR015898 : G-protein gamma-like domain
GO :
0004871 : Molecular Function : signal transducer activity
0005834 : Cellular Component : heterotrimeric G-protein complex
0007186 : Biological Process : G-protein coupled receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 7.5, cyto_nucl 6.5, cyto 4.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023555)
HIX0023555
HIT000347878 (
ENST00000366598
)
(G-protein, gamma subunit family protein.)
genome : 235,714,132 - 235,814,054 (99,923)
query : 1 - 1,721 (1,721/1,721)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 7.5, cyto_nucl 6.5, cyto 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023555)
HIX0023555
HIT000347877 (
ENST00000366597
)
(G-protein, gamma subunit family protein.)
genome : 235,714,132 - 235,758,779 (44,648)
query : 1 - 1,595 (1,595/1,595)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 7.5, cyto_nucl 6.5, cyto 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023555)
HIX0023555
HIT000588364 (
ENST00000484517
)
(G-protein, gamma subunit family protein.)
genome : 235,715,063 - 235,752,259 (37,197)
query : 1 - 678 (678/687)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 7.5, cyto_nucl 6.5, cyto 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023555)
HIX0023555
HIT000219137
(
U31382
)
(G-protein, gamma subunit family protein.)
genome : 235,715,065 - 235,758,779 (43,715)
query : 9 - 670 (662/670)
3 exons
identity = 0.991
3'(0.998;1.000;0.938)5'
coverage = 1.000
InterPro :
IPR001770 : G-protein, gamma subunit
IPR015898 : G-protein gamma-like domain
GO :
0004871 : Molecular Function : signal transducer activity
0005834 : Cellular Component : heterotrimeric G-protein complex
0007186 : Biological Process : G-protein coupled receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 7.5, cyto_nucl 6.5, cyto 4.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023555)
HIX0023555
HIT000430647
(
AK311781
)
Representative transcript
(Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4; Precursor;)
genome : 235,715,409 - 235,813,082 (97,674)
query : 1 - 471 (471/471)
4 exons
identity = 0.998
3'(0.992;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001770 : G-protein, gamma subunit
IPR015898 : G-protein gamma-like domain
GO :
0004871 : Molecular Function : signal transducer activity
0005834 : Cellular Component : heterotrimeric G-protein complex
0007186 : Biological Process : G-protein coupled receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 7.5, cyto_nucl 6.5, cyto 4.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023555)
HIX0023555
HIT000080720
(
AF493872
)
(G-protein, gamma subunit family protein.)
genome : 235,715,409 - 235,747,138 (31,730)
query : 1 - 228 (228/228)
2 exons
identity = 0.996
3'(0.992;1.000)5'
coverage = 1.000
InterPro :
IPR001770 : G-protein, gamma subunit
IPR015898 : G-protein gamma-like domain
GO :
0004871 : Molecular Function : signal transducer activity
0005834 : Cellular Component : heterotrimeric G-protein complex
0007186 : Biological Process : G-protein coupled receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 7.5, cyto_nucl 6.5, cyto 4.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023555)
HIX0023729
HIT000045963
(
AK126090
)
Representative transcript
(Conserved hypothetical protein.)
genome : 235,751,440 - 235,755,391 (3,952)
query : 1 - 3,951 (3,951/3,951)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 10, cyto_nucl 8.66667, cyto 5,
cyto_pero 4.66667, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023729)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001152579
Macaca
sp. (Macaque) : XR_012481
HIX0116507
HIT000440016
(
DQ573485
)
Representative transcript
(Non-protein coding transcript.)
genome : 235,756,911 - 235,756,940 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116507)
HIX0160566
HIT000522163 (
ENST00000424229
)
(Conserved hypothetical protein.)
genome : 235,777,974 - 235,779,697 (1,724)
query : 1 - 1,724 (1,724/1,724)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160566)
HIX0023152
HIT000318887 (
NM_182972
)
(Interferon regulatory factor 2-binding protein 1 & 2, zinc finger domain containing protein.)
genome : 234,740,016 - 234,745,271 (5,256)
query : 1 - 4,662 (4,662/4,677)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 11.3333, mito 5.5, cyto_mito 5.5,
extr 5, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023152)
HIX0023152
HIT000397782 (
NM_001077397
)
(Interferon regulatory factor 2-binding protein 1 & 2, zinc finger domain containing protein.)
genome : 234,740,016 - 234,745,271 (5,256)
query : 1 - 4,614 (4,614/4,629)
2 exons
identity = 0.999
3'(1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 11.8333, mito 5.5, extr 5,
cyto_mito 4.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023152)
HIX0023152
HIT000090153
(
BC020516
)
(Conserved hypothetical protein.)
genome : 234,740,016 - 234,743,565 (3,550)
query : 1 - 3,547 (3,547/3,562)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 12.5, nucl 12, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023152)
HIX0023152
HIT000347889 (
ENST00000366609
)
(Interferon regulatory factor 2-binding protein 1 & 2, zinc finger domain containing protein.)
genome : 234,740,015 - 234,745,271 (5,257)
query : 1 - 4,663 (4,663/4,663)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 11.3333, mito 5.5, cyto_mito 5.5,
extr 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023152)
HIX0023152
HIT000347890 (
ENST00000366610
)
(Interferon regulatory factor 2-binding protein 1 & 2, zinc finger domain containing protein.)
genome : 234,740,015 - 234,745,271 (5,257)
query : 1 - 4,615 (4,615/4,615)
2 exons
identity = 0.999
3'(1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 11.8333, mito 5.5, extr 5,
cyto_mito 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023152)
HIX0023152
HIT000494999
(
AK300375
)
(Conserved hypothetical protein.)
genome : 234,741,960 - 234,743,331 (1,372)
query : 1 - 1,373 (1,373/1,373)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.6667, extr 8, cyto 7.5,
cyto_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023152)
HIX0023152
HIT000428445
(
AK309579
)
Representative transcript
(Conserved hypothetical protein.)
genome : 234,742,203 - 234,743,860 (1,658)
query : 1 - 1,477 (1,477/1,477)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, mito_nucl 13, cyto_nucl 12.1667, mito 9.5,
cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023152)
HIX0001712
HIT000024914
(
AL133010
)
(RNA-binding protein 34; RNA-binding motif protein 34;)
genome : 235,294,962 - 235,357,392 (62,431)
query : 1 - 3,450 (3,450/3,520)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC075875
Bos
sp. (Cow) : BC109866
Gallus
sp. (Chicken) : BX933892
Oryzias
sp. (Medaka) : ENSORLT00000001503
Takifugu
sp. (Fugu) : SINFRUT00000146475
Macaca
sp. (Macaque) : XM_001110827
Pan
sp. (Chimpanzee) : XM_001154355
Gallus
sp. (Chicken) : XM_001231591
Monodelphis
sp. (Opossum) : XM_001378573
Equus
sp. (Horse) : XM_001491609
Equus
sp. (Horse) : XM_001915071
Canis
sp. (Dog) : XM_536341
HIX0001712
HIT000579224 (
ENST00000474953
)
(RNA-binding protein 34; RNA-binding motif protein 34;)
genome : 235,294,949 - 235,357,392 (62,444)
query : 1 - 3,463 (3,463/3,463)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
HIX0001712
HIT000074113
(
AF214114
)
(AT-rich interactive domain-containing protein 4B family protein.)
genome : 235,330,212 - 235,491,500 (161,289)
query : 1 - 5,772 (5,772/5,804)
23 exons
identity = 0.996
3'(0.993;1.000;1.000;1.000;0.998;1.000;1.000;
1.000;1.000;1.000;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;0.988;1.000;1.000;1.000;
0.945;0.993)5'
coverage = 1.000
InterPro :
IPR001606 : ARID DNA-binding domain
IPR002999 : Tudor domain
IPR012603 : RBB1NT
IPR028853 : AT-rich interactive domain-containing protein 4B
GO :
0003677 : Molecular Function : DNA binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 8.5, cyto_golg 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
HIX0001712
HIT000073910
(
AF208045
)
(AT-rich interactive domain-containing protein 4B; ARID domain-containing protein 4B; 180 kDa Sin3-associated polypeptide; Sin3-associated polypeptide p180; Breast cancer-associated antigen BRCAA1; Histone deacetylase complex subunit SAP180; Retinoblastoma-binding protein 1-like 1;)
genome : 235,330,212 - 235,490,269 (160,058)
query : 10 - 5,361 (5,352/5,393)
22 exons
identity = 0.991
3'(0.990;0.986;1.000;0.991;0.993;1.000;1.000;
1.000;0.942;1.000;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;0.988;1.000;1.000;1.000;
0.951)5'
coverage = 0.998
InterPro :
IPR001606 : ARID DNA-binding domain
IPR002999 : Tudor domain
IPR012603 : RBB1NT
IPR028853 : AT-rich interactive domain-containing protein 4B
GO :
0003677 : Molecular Function : DNA binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 8.5, cyto_golg 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
HIX0001712
HIT000657305 (
NM_001206794
)
(AT-rich interactive domain-containing protein 4B; ARID domain-containing protein 4B; 180 kDa Sin3-associated polypeptide; Sin3-associated polypeptide p180; Breast cancer-associated antigen BRCAA1; Histone deacetylase complex subunit SAP180; Retinoblastoma-binding protein 1-like 1;)
genome : 235,330,210 - 235,490,802 (160,593)
query : 1 - 5,946 (5,946/5,954)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 8.5, cyto_golg 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
HIX0001712
HIT000307748 (
ENST00000349213
)
(AT-rich interactive domain-containing protein 4B isoform 2.)
genome : 235,330,210 - 235,491,534 (161,325)
query : 1 - 5,811 (5,811/5,811)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
HIX0001712
HIT000109214 (
ENST00000264183
)
(AT-rich interactive domain-containing protein 4B; ARID domain-containing protein 4B; 180 kDa Sin3-associated polypeptide; Sin3-associated polypeptide p180; Breast cancer-associated antigen BRCAA1; Histone deacetylase complex subunit SAP180; Retinoblastoma-binding protein 1-like 1;)
genome : 235,330,210 - 235,491,532 (161,323)
query : 1 - 6,067 (6,067/6,067)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 8.5, cyto_golg 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
HIX0001712
HIT000206096 (
NM_016374
)
(AT-rich interactive domain-containing protein 4B; ARID domain-containing protein 4B; 180 kDa Sin3-associated polypeptide; Sin3-associated polypeptide p180; Breast cancer-associated antigen BRCAA1; Histone deacetylase complex subunit SAP180; Retinoblastoma-binding protein 1-like 1;)
genome : 235,330,210 - 235,491,532 (161,323)
query : 1 - 6,067 (6,067/6,067)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 8.5, cyto_golg 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
HIX0001712
HIT000210146 (
NM_031371
)
(AT-rich interactive domain-containing protein 4B isoform 2.)
genome : 235,330,210 - 235,491,532 (161,323)
query : 1 - 5,809 (5,809/5,809)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
HIX0001712
HIT000347883 (
ENST00000366603
)
(AT-rich interactive domain-containing protein 4B; ARID domain-containing protein 4B; 180 kDa Sin3-associated polypeptide; Sin3-associated polypeptide p180; Breast cancer-associated antigen BRCAA1; Histone deacetylase complex subunit SAP180; Retinoblastoma-binding protein 1-like 1;)
genome : 235,330,210 - 235,490,802 (160,593)
query : 1 - 5,946 (5,946/5,946)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 8.5, cyto_golg 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
HIX0001712
HIT000329907
(
AB210032
)
Representative transcript
(AT-rich interactive domain-containing protein 4B; ARID domain-containing protein 4B; 180 kDa Sin3-associated polypeptide; Sin3-associated polypeptide p180; Breast cancer-associated antigen BRCAA1; Histone deacetylase complex subunit SAP180; Retinoblastoma-binding protein 1-like 1;)
genome : 235,330,612 - 235,490,802 (160,191)
query : 1 - 5,544 (5,544/5,544)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR001606 : ARID DNA-binding domain
IPR002999 : Tudor domain
IPR012603 : RBB1NT
IPR016197 : Chromo domain-like
IPR025995 : RNA binding activity-knot of a chromodomain
IPR028853 : AT-rich interactive domain-containing protein 4B
GO :
0003677 : Molecular Function : DNA binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 8.5, cyto_golg 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF245512
Mus
sp. (Mouse) : AK136105
Danio
sp. (Zebrafish) : BC100008
Bos
sp. (Cow) : BC151790
Gallus
sp. (Chicken) : CR386711
Pongo
sp. (Orangutan) : ENSPPYT00000000106
Tetraodon
sp. (Tetraodon) : GSTENT00030867001
Takifugu
sp. (Fugu) : SINFRUT00000148622
Macaca
sp. (Macaque) : XM_001110827
Pan
sp. (Chimpanzee) : XM_001154355
Monodelphis
sp. (Opossum) : XM_001378552
Equus
sp. (Horse) : XM_001491609
Canis
sp. (Dog) : XM_851566
HIX0001712
HIT000390208
(
BC130418
)
(AT-rich interactive domain-containing protein 4B; ARID domain-containing protein 4B; 180 kDa Sin3-associated polypeptide; Sin3-associated polypeptide p180; Breast cancer-associated antigen BRCAA1; Histone deacetylase complex subunit SAP180; Retinoblastoma-binding protein 1-like 1;)
genome : 235,331,199 - 235,491,449 (160,251)
query : 1 - 5,151 (5,151/5,151)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR001606 : ARID DNA-binding domain
IPR002999 : Tudor domain
IPR012603 : RBB1NT
IPR016197 : Chromo domain-like
IPR025995 : RNA binding activity-knot of a chromodomain
IPR028853 : AT-rich interactive domain-containing protein 4B
GO :
0003677 : Molecular Function : DNA binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.8333, cyto 10,
cyto_golg 5.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
HIX0001712
HIT000502162
(
BC143719
)
(AT-rich interactive domain-containing protein 4B isoform 2.)
genome : 235,331,199 - 235,491,449 (160,251)
query : 1 - 4,996 (4,996/4,996)
24 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.998;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR001606 : ARID DNA-binding domain
IPR002999 : Tudor domain
IPR012603 : RBB1NT
IPR016197 : Chromo domain-like
IPR025995 : RNA binding activity-knot of a chromodomain
IPR028853 : AT-rich interactive domain-containing protein 4B
GO :
0003677 : Molecular Function : DNA binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 8.5, cyto_golg 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
HIX0001712
HIT000519298 (
ENST00000421364
)
(AT-rich interactive domain-containing protein 4B; ARID domain-containing protein 4B; 180 kDa Sin3-associated polypeptide; Sin3-associated polypeptide p180; Breast cancer-associated antigen BRCAA1; Histone deacetylase complex subunit SAP180; Retinoblastoma-binding protein 1-like 1;)
genome : 235,331,199 - 235,491,449 (160,251)
query : 1 - 5,151 (5,151/5,151)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.8333, cyto 10,
cyto_golg 5.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
HIX0001712
HIT000085347
(
AY220790
)
(AT-rich interactive domain-containing protein 4B; ARID domain-containing protein 4B; 180 kDa Sin3-associated polypeptide; Sin3-associated polypeptide p180; Breast cancer-associated antigen BRCAA1; Histone deacetylase complex subunit SAP180; Retinoblastoma-binding protein 1-like 1;)
genome : 235,331,840 - 235,424,069 (92,230)
query : 5 - 3,939 (3,935/3,939)
22 exons
identity = 0.998
3'(1.000;1.000;0.995;0.991;0.998;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.989;1.000;
0.991)5'
coverage = 0.999
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR001606 : ARID DNA-binding domain
IPR002999 : Tudor domain
IPR012603 : RBB1NT
IPR016197 : Chromo domain-like
IPR025995 : RNA binding activity-knot of a chromodomain
IPR028853 : AT-rich interactive domain-containing protein 4B
GO :
0003677 : Molecular Function : DNA binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 4.5, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
HIX0001712
HIT000057467
(
BX648820
)
(AT-rich interactive domain-containing protein 4B; ARID domain-containing protein 4B; 180 kDa Sin3-associated polypeptide; Sin3-associated polypeptide p180; Breast cancer-associated antigen BRCAA1; Histone deacetylase complex subunit SAP180; Retinoblastoma-binding protein 1-like 1;)
genome : 235,340,949 - 235,491,483 (150,535)
query : 2 - 3,806 (3,805/3,824)
20 exons
identity = 0.999
3'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001606 : ARID DNA-binding domain
IPR002999 : Tudor domain
IPR012603 : RBB1NT
IPR028853 : AT-rich interactive domain-containing protein 4B
GO :
0003677 : Molecular Function : DNA binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9.5, cyto_golg 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
HIX0001712
HIT000595152 (
ENST00000491632
)
(AT-rich interactive domain-containing protein 4B; ARID domain-containing protein 4B; 180 kDa Sin3-associated polypeptide; Sin3-associated polypeptide p180; Breast cancer-associated antigen BRCAA1; Histone deacetylase complex subunit SAP180; Retinoblastoma-binding protein 1-like 1;)
genome : 235,340,940 - 235,491,483 (150,544)
query : 1 - 3,814 (3,814/3,823)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9.5, cyto_golg 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
HIX0001712
HIT000058987
(
AB030181
)
(AT-rich interactive domain-containing protein 4B isoform 2.)
genome : 235,343,474 - 235,397,819 (54,346)
query : 199 - 4,385 (4,187/4,405)
12 exons
identity = 0.994
3'(0.997;1.000;1.000;0.973;0.989;0.988;1.000;
1.000;1.000;1.000;1.000;0.946)5'
coverage = 0.955
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR001606 : ARID DNA-binding domain
IPR016197 : Chromo domain-like
IPR025995 : RNA binding activity-knot of a chromodomain
IPR028853 : AT-rich interactive domain-containing protein 4B
GO :
0003677 : Molecular Function : DNA binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16.1667, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
HIX0001712
HIT000575697 (
ENST00000471257
)
(AT-rich interactive domain-containing protein 4B; ARID domain-containing protein 4B; 180 kDa Sin3-associated polypeptide; Sin3-associated polypeptide p180; Breast cancer-associated antigen BRCAA1; Histone deacetylase complex subunit SAP180; Retinoblastoma-binding protein 1-like 1;)
genome : 235,343,474 - 235,397,807 (54,334)
query : 1 - 4,175 (4,175/4,195)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 14.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
HIX0001712
HIT000099024
(
BC048959
)
(AT-rich interactive domain-containing protein 4B; ARID domain-containing protein 4B; 180 kDa Sin3-associated polypeptide; Sin3-associated polypeptide p180; Breast cancer-associated antigen BRCAA1; Histone deacetylase complex subunit SAP180; Retinoblastoma-binding protein 1-like 1;)
genome : 235,357,502 - 235,491,493 (133,992)
query : 1 - 2,152 (2,152/2,167)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR001606 : ARID DNA-binding domain
IPR002999 : Tudor domain
IPR012603 : RBB1NT
IPR028853 : AT-rich interactive domain-containing protein 4B
GO :
0003677 : Molecular Function : DNA binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
HIX0001712
HIT000089404
(
BC017800
)
(AT-rich interactive domain-containing protein 4B; ARID domain-containing protein 4B; 180 kDa Sin3-associated polypeptide; Sin3-associated polypeptide p180; Breast cancer-associated antigen BRCAA1; Histone deacetylase complex subunit SAP180; Retinoblastoma-binding protein 1-like 1;)
genome : 235,359,346 - 235,392,668 (33,323)
query : 1 - 1,152 (1,152/1,193)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.989
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR001606 : ARID DNA-binding domain
IPR016197 : Chromo domain-like
IPR025995 : RNA binding activity-knot of a chromodomain
IPR028853 : AT-rich interactive domain-containing protein 4B
GO :
0003677 : Molecular Function : DNA binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 17, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
HIX0001712
HIT000516238 (
ENST00000418304
)
(AT-rich interactive domain-containing protein 4B; ARID domain-containing protein 4B; 180 kDa Sin3-associated polypeptide; Sin3-associated polypeptide p180; Breast cancer-associated antigen BRCAA1; Histone deacetylase complex subunit SAP180; Retinoblastoma-binding protein 1-like 1;)
genome : 235,383,242 - 235,491,511 (108,270)
query : 1 - 1,759 (1,759/1,759)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 15.8333, cyto_pero 12.1667,
nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001712)
HIX0114289
pHIT000003609 ( pHIT000003609 )
Representative transcript
(Hypothetical short protein.)
genome : 234,658,855 - 234,658,968 (114)
query : 1 - 114 (114/114)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0114289)
CAGE tag :
H09BA33C0207,H09BA53D0204,H09BA88I0103
H10BA82K1611,H21BA51N1403
HIX0180112
pHIT000072410 ( pHIT000072410 )
Representative transcript
(Hypothetical protein.)
genome : 235,489,999 - 235,490,538 (540)
query : 1 - 540 (540/540)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0180112)
CAGE tag :
H05BB19N0605,H05BB35B1706,H05BC24I0604
H05BC83K0807,H05BD26J2005
AL672045.11
234200001-234299202 F +
NCBI
BX005090.4
234299203-234323053 F +
NCBI
AL122008.28
234323054-234465460 F +
NCBI
AL355472.19
234465461-234556088 F +
NCBI
AL136124.10
234556089-234658720 F +
NCBI
AL161640.23
234658721-234742538 F +
NCBI
AL160408.24
234742539-234873425 F +
NCBI
AL360294.11
234873426-234985315 F +
NCBI
AL391832.10
234985316-235127963 F +
NCBI
BX470173.6
235127964-235167041 F +
NCBI
CR589906.2
235167042-235192211 F +
NCBI
50000
235192212-235242211 N
BX470108.3
235242212-235258641 F +
NCBI
AL732292.12
235258642-235307656 F +
NCBI
AL133418.4
235307657-235383241 F +
NCBI
AL391994.28
235383242-235523514 F +
NCBI
AL357556.18
235523515-235572921 F +
NCBI
AL672237.1
235572922-235613301 F +
NCBI
AL135928.6
235613302-235694240 F +
NCBI
AL672238.1
235694241-235731913 F +
NCBI
AL583844.11
235731914-235800000 F +
NCBI