Clickable map CGI

HIX0160514
HIT000520149 ( ENST00000422215 )
  (Ribosomal protein L39e family protein.)
  genome : 239,216,048 - 239,216,203 (156)
  query : 1 - 156 (156/156)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 21, nucl 9
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0160514)

HIX0001730
HIT000026207 ( AL162037 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 239,411,109 - 239,414,118 (3,010)
  query : 1 - 3,010 (3,010/3,019)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    cyto 18, extr 9, cyto_golg 9
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0001730)

HIX0214255
HIT000675139 ( ENST00000561926 )
  (Conserved hypothetical protein.)
  genome : 239,411,108 - 239,414,118 (3,011)
  query : 1 - 3,011 (3,011/3,011)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 20, mito 5, cyto 4.5, cyto_pero 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0214255)

HIX0161122
HIT000540344 ( ENST00000442410 )
  (Hypothetical short protein.)
  genome : 239,433,025 - 239,461,237 (28,213)
  query : 1 - 448 (448/448)
  2 exons
  identity = 0.993
  3'(1.000;0.914)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 15, mito 15
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0161122)

HIX0199865
HIT000012963 ( AK056349 )
  (Conserved hypothetical protein.)
  genome : 239,549,865 - 240,049,896 (500,032)
  query : 1 - 2,005 (2,005/2,005)
  9 exons
  identity = 0.998
  5'(0.997;1.000;0.991;1.000;1.000;0.990;1.000;
      1.000;0.998)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17.5, cyto_nucl 13.5, extr 5, nucl 4.5, mito 2,
    cysk 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0199865)

HIX0199865
HIT000573132 ( ENST00000468573 )
  (Conserved hypothetical protein.)
  genome : 239,549,865 - 240,049,896 (500,032)
  query : 1 - 2,005 (2,005/2,005)
  9 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17.5, cyto_nucl 13.5, extr 5, nucl 4.5, mito 2,
    cysk 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0199865)

HIX0199865
HIT000595823 ( ENST00000492335 )
  (Hypothetical short protein.)
  genome : 239,550,220 - 239,769,507 (219,288)
  query : 1 - 719 (719/719)
  4 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 13.5, extr 13, mito_pero 7.5, nucl 2, cyto 2,
    cyto_nucl 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0199865)

HIX0199865
HIT000585742 ( ENST00000481779 )
  (Hypothetical short protein.)
  genome : 239,571,520 - 239,709,912 (138,393)
  query : 1 - 1,101 (1,101/1,101)
  3 exons
  identity = 1.000
  5'(1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 20, mito 6, plas 3, E.R._mito 3, cyto_mito 3,
    mito_nucl 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0199865)

HIX0199865
HIT000106797 ( ENST00000255380 )
  (Muscarinic acetylcholine receptor M3;)
  genome : 239,792,373 - 240,078,750 (286,378)
  query : 1 - 8,778 (8,778/8,778)
  5 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0199865)

HIX0199865
HIT000197756 ( NM_000740 )
  (Muscarinic acetylcholine receptor M3;)
  genome : 239,792,373 - 240,072,716 (280,344)
  query : 1 - 2,744 (2,744/2,757)
  5 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0199865)

HIX0199865
HIT000591172 ( ENST00000487470 )
  (Hypothetical short protein.)
  genome : 239,795,551 - 239,866,949 (71,399)
  query : 1 - 581 (581/581)
  3 exons
  identity = 1.000
  5'(1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 20, extr 10, E.R._mito 10, mito_pero 10
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0199865)

HIX0001731
HIT000708781 ( ENST00000596999 )
  (Hypothetical short protein.)
  genome : 239,866,684 - 239,867,454 (771)
  query : 1 - 771 (771/771)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 19, cyto 7.5, cyto_mito 6, mito 3.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0001731)

HIX0001731
HIT000027196 ( AL832284 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 239,867,192 - 239,882,366 (15,175)
  query : 1 - 2,431 (2,431/2,440)
  5 exons
  identity = 0.997
  3'(0.998;0.978;1.000;1.000;1.000)5'
  coverage = 0.996
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    mito 15.5, extr 12, mito_pero 9, cyto 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0001731)
  Ortholog candidate  ( -> Evola )
    Pan sp. (Chimpanzee) : ENSPTRT00000045827

HIX0001731
HIT000525793 ( ENST00000427859 )
  (Conserved hypothetical protein.)
  genome : 239,867,192 - 239,882,366 (15,175)
  query : 1 - 2,431 (2,431/2,431)
  5 exons
  identity = 0.998
  3'(1.000;0.978;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    mito 15.5, extr 12, mito_pero 9, cyto 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0001731)

HIX0001731
HIT000526110 ( ENST00000428176 )
  (Conserved hypothetical protein.)
  genome : 239,869,622 - 239,870,822 (1,201)
  query : 1 - 789 (789/789)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 27, cyto 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0001731)

HIX0001731
HIT000712573 ( ENST00000600831 )
  (Conserved hypothetical protein.)
  genome : 239,869,725 - 239,893,765 (24,041)
  query : 1 - 452 (452/452)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    mito 15.5, extr 12, mito_pero 9, cyto 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0001731)

HIX0001731
HIT000556259 ( ENST00000458325 )
  (Conserved hypothetical protein.)
  genome : 239,870,424 - 239,882,419 (11,996)
  query : 1 - 950 (950/950)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 16, cyto 8, extr_plas 8
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0001731)

HIX0001731
HIT000705666 ( ENST00000593855 )
  (Conserved hypothetical protein.)
  genome : 239,870,651 - 239,893,765 (23,115)
  query : 1 - 718 (718/718)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    mito 18.5, mito_pero 10.5, extr 9, cyto 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0001731)

HIX0199865
HIT000545954 ( ENST00000448020 )
  (Muscarinic acetylcholine receptor M3;)
  genome : 239,882,843 - 240,071,080 (188,238)
  query : 1 - 587 (587/587)
  3 exons
  identity = 1.000
  5'(1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    mito 16, plas 5.5, nucl 4, extr_plas 3.5, E.R. 3,
    cyto_nucl 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0199865)

HIX0199865
HIT000388223 ( BC121026 )
  Representative transcript
  (Muscarinic acetylcholine receptor M3;)
  genome : 239,990,555 - 240,072,597 (82,043)
  query : 1 - 1,989 (1,989/1,989)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR000995 : Muscarinic acetylcholine receptor family
    IPR001183 : Muscarinic acetylcholine receptor M3
  GO :
    0005887 : Cellular Component : integral component of plasma membrane
    0007186 : Biological Process : G-protein coupled receptor signaling pathway
    0016907 : Molecular Function : G-protein coupled acetylcholine receptor activity
    0045987 : Biological Process : positive regulation of smooth muscle contraction
    0046541 : Biological Process : saliva secretion
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0199865)
  Ortholog candidate  ( -> Evola )
    Mus sp. (Mouse) : AK080950
    Pongo sp. (Orangutan) : CR859367
    Oryzias sp. (Medaka) : ENSORLT00000006605
    Tetraodon sp. (Tetraodon) : GSTENT00031575001
    Gallus sp. (Chicken) : L10617
    Rattus sp. (Rat) : M18088
    Takifugu sp. (Fugu) : SINFRUT00000175548
    Macaca sp. (Macaque) : XM_001096165
    Pan sp. (Chimpanzee) : XM_001159404
    Monodelphis sp. (Opossum) : XM_001377963
    Equus sp. (Horse) : XM_001491608
    Danio sp. (Zebrafish) : XM_695289

HIX0023816
HIT000049575 ( AK130304 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 240,024,710 - 240,027,379 (2,670)
  query : 1 - 2,671 (2,671/2,671)
  1 exon
  identity = 0.999
  5'(0.999)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 17, cyto 9.5, cyto_nucl 8, nucl 3.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023816)

HIX0161191
HIT000542655 ( ENST00000444721 )
  (Hypothetical short protein.)
  genome : 240,061,316 - 240,063,172 (1,857)
  query : 1 - 486 (486/486)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 12, cyto_nucl 8, cyto 7.5, nucl 5.5, mito 3,
    pero 2, golg 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0161191)

HIX0199865
HIT000020570 ( AK095715 )
  (Conserved hypothetical protein.)
  genome : 240,074,963 - 240,078,744 (3,782)
  query : 1 - 3,782 (3,782/3,782)
  1 exon
  identity = 0.999
  5'(0.999)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 24, mito 6.5, mito_pero 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0199865)
  Ortholog candidate  ( -> Evola )
    Macaca sp. (Macaque) : AB052190

HIX0160770
HIT000528476 ( ENST00000430542 )
  (Hypothetical protein.)
  genome : 240,078,739 - 240,080,255 (1,517)
  query : 1 - 443 (443/443)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 11, nucl 10.5, cyto 10.5, extr 9
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0160770)

HIX0200136
HIT000483835 ( ENST00000400943 )
  (Hydroxymethylglutaryl-CoA synthase, eukaryotic family protein.)
  genome : 240,136,087 - 240,137,545 (1,459)
  query : 1 - 1,459 (1,459/1,459)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 12, extr 9, cyto_nucl 8.5, mito 6, nucl 3,
    E.R._mito 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0200136)

HIX0199918
HIT000659714 ( NR_036695 )
  (40S ribosomal protein S7;)
  genome : 240,170,824 - 240,176,560 (5,737)
  query : 1 - 953 (953/953)
  2 exons
  identity = 0.999
  5'(1.000;0.998)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 19, mito 8, extr 3
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0199918)

HIX0199918
HIT000539416 ( ENST00000441482 )
  (40S ribosomal protein S7;)
  genome : 240,175,946 - 240,176,526 (581)
  query : 1 - 581 (581/581)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 26, nucl 3, cyto 3, cyto_nucl 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0199918)

HIX0021237
HIT000545029 ( ENST00000447095 )
  (Formin-2.)
  genome : 240,177,648 - 240,370,487 (192,840)
  query : 1 - 906 (906/906)
  6 exons
  identity = 0.983
  5'(1.000;1.000;1.000;0.926;0.946;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 16, cyto_nucl 14.5, nucl 9, extr 6
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021237)

HIX0021237
HIT000122140 ( ENST00000319653 )
  (Formin-2;)
  genome : 240,255,180 - 240,638,489 (383,310)
  query : 1 - 6,434 (6,434/6,434)
  18 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 20, cyto_nucl 16.5, cyto 11
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021237)

HIX0021237
HIT000207713 ( NM_020066 )
  (Formin-2;)
  genome : 240,255,185 - 240,638,489 (383,305)
  query : 1 - 6,429 (6,429/6,440)
  18 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 20, cyto_nucl 16.5, cyto 11
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021237)

HIX0021237
HIT000074298 ( AF218941 )
  (Formin-2.)
  genome : 240,256,595 - 240,370,293 (113,699)
  query : 1 - 996 (996/1,005)
  5 exons
  identity = 0.999
  5'(0.998;1.000;1.000;1.000;1.000)3'
  coverage = 0.999
  InterPro :
    IPR000591 : DEP domain
  GO :
    0035556 : Biological Process : intracellular signal transduction
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 15, mito 12.5, cyto_nucl 10.3333,
    cyto_mito 8.66667
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021237)

HIX0178389
HIT000549826 ( ENST00000451892 )
  (Conserved hypothetical protein.)
  genome : 240,305,970 - 240,308,689 (2,720)
  query : 1 - 2,720 (2,720/2,720)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 16.5, cyto_nucl 13.5, nucl 7.5, cysk 3, extr 2,
    mito 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0178389)

HIX0178317
HIT000531776 ( ENST00000433842 )
  (Alcohol dehydrogenase, C-terminal domain containing protein.)
  genome : 240,333,455 - 240,334,591 (1,137)
  query : 1 - 1,137 (1,137/1,137)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 13, plas 10, mito 5, cysk_plas 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0178317)

HIX0159770
HIT000510245 ( ENST00000412311 )
  (Conserved hypothetical protein.)
  genome : 240,341,139 - 240,342,944 (1,806)
  query : 1 - 497 (497/497)
  3 exons
  identity = 0.992
  3'(1.000;0.975;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 21, cyto 7.5, cyto_nucl 5.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0159770)

HIX0159770
HIT000542242 ( ENST00000444308 )
  (Non-protein coding transcript.)
  genome : 240,341,139 - 240,342,944 (1,806)
  query : 1 - 338 (338/338)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0159770)

HIX0021237
HIT000568194 ( ENST00000463398 )
  (Formin-2.)
  genome : 240,399,071 - 240,493,976 (94,906)
  query : 1 - 571 (571/571)
  6 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 20, mito 7, cyto 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021237)

HIX0021237
HIT000492379 ( AK297755 )
  (Formin-2.)
  genome : 240,408,560 - 240,637,842 (229,283)
  query : 1 - 1,488 (1,488/1,488)
  10 exons
  identity = 0.990
  5'(1.000;1.000;1.000;0.989;0.992;0.993;1.000;
      1.000;0.833;1.000)3'
  coverage = 1.000
  InterPro :
    IPR001265 : Formin homology family, Cappuccino subfamily
    IPR015425 : Formin, FH2 domain
  GO :
    0005884 : Cellular Component : actin filament
    0045010 : Biological Process : actin nucleation
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 21, cyto 8
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021237)

HIX0021237
HIT000539276 ( ENST00000441342 )
  (Formin-2.)
  genome : 240,408,560 - 240,492,692 (84,133)
  query : 1 - 602 (602/602)
  5 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 21, cyto_nucl 5, nucl 4.5, cyto 4.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021237)

HIX0021237
HIT000492765 ( AK298141 )
  (Formin-2.)
  genome : 240,408,591 - 240,637,857 (229,267)
  query : 1 - 1,632 (1,632/1,632)
  11 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR001265 : Formin homology family, Cappuccino subfamily
    IPR015425 : Formin, FH2 domain
  GO :
    0005884 : Cellular Component : actin filament
    0045010 : Biological Process : actin nucleation
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 16.5, cyto 15.5, nucl 14.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021237)

HIX0021237
HIT000644796 ( ENST00000545751 )
  (Formin-2.)
  genome : 240,408,591 - 240,637,857 (229,267)
  query : 1 - 1,632 (1,632/1,632)
  11 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 16.5, cyto 15.5, nucl 14.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021237)

HIX0021237
HIT000492340 ( AK297716 )
  (Formin-2.)
  genome : 240,414,227 - 240,637,867 (223,641)
  query : 1 - 1,577 (1,577/1,577)
  13 exons
  identity = 0.998
  5'(0.967;1.000;1.000;1.000;0.992;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR001265 : Formin homology family, Cappuccino subfamily
    IPR015425 : Formin, FH2 domain
  GO :
    0005884 : Cellular Component : actin filament
    0045010 : Biological Process : actin nucleation
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 19.5, cyto_nucl 17.5, nucl 12.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021237)

HIX0021237
HIT000002356 ( AF225426 )
  (Formin-2.)
  genome : 240,492,444 - 240,638,489 (146,046)
  query : 29 - 1,952 (1,924/1,963)
  10 exons
  identity = 0.994
  5'(1.000;1.000;0.980;1.000;0.967;1.000;1.000;
      1.000;1.000;0.996)3'
  coverage = 0.986
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 18.5, cyto_nucl 10.5, extr 7, pero 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021237)

HIX0021237
HIT000074299 ( AF218942 )
  (Formin-2.)
  genome : 240,492,442 - 240,638,478 (146,037)
  query : 7 - 1,918 (1,912/1,952)
  10 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000)3'
  coverage = 0.980
  InterPro :
    IPR001265 : Formin homology family, Cappuccino subfamily
    IPR015425 : Formin, FH2 domain
  GO :
    0005884 : Cellular Component : actin filament
    0045010 : Biological Process : actin nucleation
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 15, cyto_nucl 11.5, extr 9, nucl 6
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021237)

HIX0021237
HIT000036658 ( BC014364 )
  (Formin-2.)
  genome : 240,493,902 - 240,638,484 (144,583)
  query : 1 - 1,513 (1,513/1,542)
  9 exons
  identity = 0.995
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      0.994;0.983)3'
  coverage = 1.000
  InterPro :
    IPR001265 : Formin homology family, Cappuccino subfamily
    IPR015425 : Formin, FH2 domain
  GO :
    0005884 : Cellular Component : actin filament
    0045010 : Biological Process : actin nucleation
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 16, cyto 7.5, cyto_nucl 6.5, mito 6
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021237)

HIX0023745
HIT000046826 ( AK126953 )
  Representative transcript
  (Retrovirus-related Pol polyprotein LINE-1; Long interspersed element-1; L1; Includes: Reverse transcriptase; EC=2.7.7.49; Includes: Endonuclease;)
  genome : 240,557,059 - 240,561,085 (4,027)
  query : 1 - 4,015 (4,015/4,015)
  1 exon
  identity = 0.992
  3'(0.992)5'
  coverage = 1.000
  EC number :
    EC 2.7.7.49
  InterPro :
    IPR013544 : Domain of unknown function DUF1725
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 17, mito 9.5, mito_pero 5.5, cyto 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023745)

HIX0161491
HIT000553533 ( ENST00000455599 )
  (Conserved hypothetical protein.)
  genome : 240,563,971 - 240,564,423 (453)
  query : 1 - 316 (316/316)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 27, mito 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0161491)

HIX0021237
HIT000340457 ( BC112335 )
  (Formin-2.)
  genome : 240,620,793 - 240,637,567 (16,775)
  query : 18 - 2,908 (2,891/2,908)
  3 exons
  identity = 0.998
  5'(0.998;0.995;1.000)3'
  coverage = 0.994
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 23, mito 5, cyto 3, mito_nucl 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021237)

HIX0021237
HIT000340480 ( BC112361 )
  (Formin-2.)
  genome : 240,620,793 - 240,637,567 (16,775)
  query : 18 - 2,908 (2,891/2,908)
  3 exons
  identity = 0.998
  5'(0.998;0.995;1.000)3'
  coverage = 0.994
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 23, mito 5, cyto 3, mito_nucl 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021237)

HIX0021237
HIT000642726 ( ENST00000543681 )
  (Formin-2.)
  genome : 240,620,782 - 240,637,567 (16,786)
  query : 1 - 2,902 (2,902/2,902)
  3 exons
  identity = 0.999
  5'(0.998;0.999;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 23, mito 5, cyto 3, mito_nucl 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021237)

HIX0214326
HIT000708669 ( ENST00000596886 )
  (Non-protein coding transcript.)
  genome : 240,629,183 - 240,643,504 (14,322)
  query : 1 - 69 (69/69)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0214326)

HIX0021237
HIT000600247 ( ENST00000496950 )
  (Formin-2.)
  genome : 240,635,398 - 240,638,009 (2,612)
  query : 1 - 693 (693/693)
  3 exons
  identity = 1.000
  5'(1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 14, cyto_nucl 12, extr 6, cyto 6, mito 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021237)

HIX0001735
HIT000208741 ( NM_022469 )
  (Gremlin-2; Cysteine knot superfamily 1, BMP antagonist 2; DAN domain family member 3; Protein related to DAN and cerberus; Precursor;)
  genome : 240,652,874 - 240,775,462 (122,589)
  query : 1 - 4,182 (4,182/4,199)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 32
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0001735)

HIX0001735
HIT000121587 ( ENST00000318160 )
  (Gremlin-2; Cysteine knot superfamily 1, BMP antagonist 2; DAN domain family member 3; Protein related to DAN and cerberus; Precursor;)
  genome : 240,652,873 - 240,775,449 (122,577)
  query : 1 - 4,170 (4,170/4,170)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0001735)

HIX0001735
HIT000053048 ( BC046632 )
  (Gremlin-2; Cysteine knot superfamily 1, BMP antagonist 2; DAN domain family member 3; Protein related to DAN and cerberus; Precursor;)
  genome : 240,653,790 - 240,775,389 (121,600)
  query : 2 - 3,193 (3,192/3,208)
  2 exons
  identity = 0.995
  3'(0.995;0.995)5'
  coverage = 1.000
  InterPro :
    IPR004133 : DAN
    IPR006207 : Cystine knot, C-terminal
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0001735)

HIX0161550
HIT000555411 ( ENST00000457477 )
  (Hypothetical short protein.)
  genome : 240,693,752 - 240,694,162 (411)
  query : 1 - 354 (354/354)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 22, mito 7
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0161550)

HIX0160621
HIT000523703 ( ENST00000425769 )
  (Cytochrome c oxidase, subunit I domain containing protein.)
  genome : 240,713,167 - 240,713,678 (512)
  query : 1 - 204 (204/204)
  2 exons
  identity = 0.990
  3'(0.993;0.982)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 15.5, cyto_nucl 11, extr 8, nucl 3.5, cysk 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0160621)

HIX0160725
HIT000526825 ( ENST00000428891 )
  (Conserved hypothetical protein.)
  genome : 240,751,822 - 240,752,477 (656)
  query : 1 - 656 (656/675)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 0.972
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 22, cyto_nucl 12.5, mito 6, E.R._mito 4.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0160725)

HIX0160468
HIT000518691 ( ENST00000420757 )
  (Ribosomal protein S17 family protein.)
  genome : 240,799,899 - 240,800,352 (454)
  query : 1 - 454 (454/454)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 19, cyto 5, mito 5, cyto_mito 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0160468)

bases per tick : kb first site :
main : All Human Genes JIGSAW prediction ESTs assembly
homology : UCSC CCDS Pseudogene.org Conserved regions ( Segmental duplication P.troglodytes P.abelii M.mulatta M.musculus R.norvegicus C.familiaris E.caballus B.taurus M.domestica G.gallus D.rerio O.latipes T.nigroviridis T.rubripes )
gene prediction : FGENESH GenScan HMMgene tRNA
show... : SNPs ESTs(summary) ESTs(detail) CAGE tag(summary) CAGE tag(detail)
sequence viewer : = ( , )